Gene: Mmp17 (matrix metallopeptidase 17) Rattus norvegicus
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Symbol: Mmp17
Name: matrix metallopeptidase 17
Description: Predicted to have metalloendopeptidase activity; predicted to be involved in several processes, including collagen catabolic process, drinking behavior, and extracellular matrix organization; predicted to localize to the extracellular space; orthologous to human MMP17 (matrix metallopeptidase 17); INTERACTS WITH 17alpha-ethynylestradiol; 3,3',5,5'-tetrabromobisphenol A; acrylamide.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: LOC288626; matrix metalloproteinase 17; matrix metalloproteinase-17
Orthologs:
Homo sapiens (human) : MMP17 (matrix metallopeptidase 17)  HGNC  Alliance
Mus musculus (house mouse) : Mmp17 (matrix metallopeptidase 17)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Mmp17 (matrix metallopeptidase 17)
Pan paniscus (bonobo/pygmy chimpanzee) : MMP17 (matrix metallopeptidase 17)
Canis lupus familiaris (dog) : MMP17 (matrix metallopeptidase 17)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Mmp17 (matrix metallopeptidase 17)
Sus scrofa (pig) : MMP17 (matrix metallopeptidase 17)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
NCBI Annotation Information: Annotation category: partial on reference assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01230,701,900 - 30,728,683 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.01230,353,874 - 30,356,526 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.01232,636,484 - 32,663,678 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41228,142,947 - 28,168,483 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11228,007,827 - 28,031,804 (-)NCBI
Celera1228,778,275 - 28,803,185 (-)NCBICelera
Cytogenetic Map12q13NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated
RGD Disease Portals

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 5.0)

Additional Information

External Database Links
Nomenclature History
 
More on Mmp17
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1311541
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2019-04-23
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.