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Gene: Gtf2ird2 (GTF2I repeat domain containing 2) Rattus norvegicus
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Symbol: Gtf2ird2
Name: GTF2I repeat domain containing 2
Description: Predicted to be involved in transition between fast and slow fiber. Predicted to localize to the nucleus. Orthologous to human GTF2IRD2B (GTF2I repeat domain containing 2B); INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine (ortholog); 2-methylcholine (ortholog); 4,4'-diaminodiphenylmethane (ortholog).
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: general transcription factor II I repeat domain-containing 2; general transcription factor II-I repeat domain-containing protein 2B; LOC288606; RGD1307435; RGD1566086; similar to gtf2ird2
Orthologs:
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
NCBI Annotation Information: Annotation category: partial on reference assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01225,509,059 - 25,555,554 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.01227,517,572 - 27,563,063 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41223,650,480 - 23,681,954 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11223,527,583 - 23,545,170 (-)NCBI
Celera1224,259,281 - 24,310,588 (-)NCBICelera
Cytogenetic Map12q12NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated
RGD Disease Portals

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences

Strain Variation

Strain Sequence Variants (Rnor 5.0)
Damaging Variants

Additional Information

External Database Links
Nomenclature History
 
More on Gtf2ird2
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1307435
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2019-04-23
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.