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Gene: Ift81 (intraflagellar transport 81) Rattus norvegicus
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Symbol: Ift81
Name: intraflagellar transport 81
Description: Predicted to have tubulin binding activity. Predicted to be involved in intraciliary transport involved in cilium assembly; regulation of smoothened signaling pathway; and spermatogenesis. Predicted to localize to the cilium; intraciliary transport particle B; and microtubule organizing center. Human ortholog(s) of this gene implicated in short-rib thoracic dysplasia 19 with or without polydactyly. Orthologous to human IFT81 (intraflagellar transport 81); INTERACTS WITH 2,5-hexanedione; 4-amino-2,6-dinitrotoluene; carbendazim.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: carnitine deficiency-associated gene expressed in ventricle 1; carnitine deficiency-associated protein expressed in ventricle 1; Cdv-1; Cdv1; intraflagellar transport 81 homolog; intraflagellar transport 81 homolog (Chlamydomonas); intraflagellar transport protein 81 homolog
Orthologs:
Homo sapiens (human) : IFT81 (intraflagellar transport 81)  HGNC  Alliance
Mus musculus (house mouse) : Ift81 (intraflagellar transport 81)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Ift81 (intraflagellar transport 81)
Pan paniscus (bonobo/pygmy chimpanzee) : IFT81 (intraflagellar transport 81)
Canis lupus familiaris (dog) : IFT81 (intraflagellar transport 81)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Ift81 (intraflagellar transport 81)
Sus scrofa (pig) : IFT81 (intraflagellar transport 81)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
NCBI Annotation Information: Annotation category: partial on reference assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01239,420,161 - 39,507,412 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.01241,307,847 - 41,388,160 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41235,141,656 - 35,211,847 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11235,005,043 - 35,075,235 (+)NCBI
Celera1235,630,967 - 35,698,130 (+)NCBICelera
Cytogenetic Map12q16NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated
RGD Disease Portals

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome

Strain Variation

Strain Sequence Variants (Rnor 5.0)

Additional Information

External Database Links
Nomenclature History
 
More on Ift81
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 727862
Created: 2003-11-05
Species: Rattus norvegicus
Last Modified: 2019-04-23
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.