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Gene: Usp30 (ubiquitin specific peptidase 30) Rattus norvegicus
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Symbol: Usp30
Name: ubiquitin specific peptidase 30
Description: Predicted to have cysteine-type endopeptidase activity and thiol-dependent ubiquitin-specific protease activity. Involved in negative regulation of mitophagy. Predicted to localize to the mitochondrial outer membrane. Orthologous to human USP30 (ubiquitin specific peptidase 30); PARTICIPATES IN mitochondrial autophagy pathway; INTERACTS WITH bisphenol A; decabromodiphenyl ether; glyphosate.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: deubiquitinating enzyme 30; LOC304579; ub-specific protease 30; ubiquitin carboxyl-terminal hydrolase 30; ubiquitin specific protease 30; ubiquitin thioesterase 30; ubiquitin-specific-processing protease 30
Orthologs:
Homo sapiens (human) : USP30 (ubiquitin specific peptidase 30)  HGNC  Alliance
Mus musculus (house mouse) : Usp30 (ubiquitin specific peptidase 30)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Usp30 (ubiquitin specific peptidase 30)
Pan paniscus (bonobo/pygmy chimpanzee) : USP30 (ubiquitin specific peptidase 30)
Canis lupus familiaris (dog) : USP30 (ubiquitin specific peptidase 30)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Usp30 (ubiquitin specific peptidase 30)
Sus scrofa (pig) : USP30 (ubiquitin specific peptidase 30)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01248,262,663 - 48,316,580 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1248,262,658 - 48,316,722 (-)Ensembl
Rnor_5.01250,044,991 - 50,068,680 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41243,536,736 - 43,560,425 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11243,400,118 - 43,423,920 (-)NCBI
Celera1244,105,878 - 44,129,550 (-)NCBICelera
Cytogenetic Map12q16NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
 
More on Usp30
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1307949
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2019-11-27
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.