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Gene: Sgsm1 (small G protein signaling modulator 1) Rattus norvegicus
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Symbol: Sgsm1
Name: small G protein signaling modulator 1
Description: Predicted to have GTPase activator activity and Rab GTPase binding activity. Predicted to be involved in activation of GTPase activity; intracellular protein transport; and positive regulation of transcription by RNA polymerase II. Predicted to localize to the cytoplasmic vesicle membrane and cytosol. Orthologous to human SGSM1 (small G protein signaling modulator 1); INTERACTS WITH acrylamide; atrazine; bisphenol A.
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: LOC288743; RUN and TBC1 domain containing 2; Rutbc2
Orthologs:
Homo sapiens (human) : SGSM1 (small G protein signaling modulator 1)  HGNC  Alliance
Mus musculus (house mouse) : Sgsm1 (small G protein signaling modulator 1)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Sgsm1 (small G protein signaling modulator 1)
Pan paniscus (bonobo/pygmy chimpanzee) : SGSM1 (small G protein signaling modulator 1)
Canis lupus familiaris (dog) : SGSM1 (small G protein signaling modulator 1)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Sgsm1 (small G protein signaling modulator 1)
Sus scrofa (pig) : SGSM1 (small G protein signaling modulator 1)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01249,329,093 - 49,395,078 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.01251,102,730 - 51,169,362 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41244,329,807 - 44,395,211 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11244,211,959 - 44,256,802 (+)NCBI
Celera1244,917,920 - 44,983,077 (+)NCBICelera
Cytogenetic Map12q16NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome

Strain Variation

Strain Sequence Variants (Rnor 5.0)
Damaging Variants

Additional Information

External Database Links
Nomenclature History
 
More on Sgsm1
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1308178
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2019-04-23
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.