D12Hmgc3 Marker Search Result - Rat Genome Database

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Marker: D12Hmgc3

Symbol: D12Hmgc3
Previously known as: D12-624; NoName; 
RGD ID: 5683878
Expected Size: 194 (bp)
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21213,008,296 - 13,008,490 (+)MAPPERmRatBN7.2
Rnor_6.01215,085,585 - 15,085,778NCBIRnor6.0
Rnor_5.01217,102,817 - 17,103,010UniSTSRnor5.0
Celera1214,777,134 - 14,777,327UniSTS
Cytogenetic Map12q11UniSTS
Is Marker For: Strains:   SS-Chr 12BN.SS-(D12Hmgc3-D12Rat79)/Mcwi   SS-Chr 12BN.SS-(D12Hmgc3-D12Hmgc6)/Mcwi   SS.BN-(D12Hmgc3-AU047911)/Mcwi   SS.BN-(D12Hmgc3-D12Got29)/Mcwi  
QTLs:   Bp358  
Genes:   Sdk1  




#
Reference Title
Reference Citation
1. Data registered by Dr. Howard Jacob's group Personal communication between Dr. Howard Jacob's group and the RGD curators.
2. UniSTS Pipeline RGD automated pipelines


 
Forward Primer GAATGAGTTACCCGTCAGGAAC
Reverse Primer GCCCGTTCGTTACGTGGGCCAT
 


The following Genes overlap with this region.    Full Report CSV TAB Printer Analysis Tools
RGD ID
Symbol
Name
Chr
Start
Stop
Species
1560686Sdk1sidekick cell adhesion molecule 1121237807413363934Rat
GenBank Nucleotide JH617495.1 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles


1 to 10 of 41 rows
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
2312418Kidm41Kidney mass QTL 413.70.0001kidney mass (VT:0002707)single kidney wet weight to body weight ratio (CMO:0000622)12119611090Rat
8552964Pigfal17Plasma insulin-like growth factor 1 level QTL 173.5blood insulin-like growth factor amount (VT:0010479)plasma insulin-like growth factor 1 level (CMO:0001299)12556449546669029Rat
7411641Foco19Food consumption QTL 1927.70.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)12556449546669029Rat
9590147Scort7Serum corticosterone level QTL 713.610.001blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)12142110980Rat
1641928Alcrsp5Alcohol response QTL 5response to alcohol trait (VT:0010489)duration of loss of righting reflex (CMO:0002289)121281238546669029Rat
8552912Pigfal6Plasma insulin-like growth factor 1 level QTL 65blood insulin-like growth factor amount (VT:0010479)plasma insulin-like growth factor 1 level (CMO:0001299)12556449846669029Rat
1549829Scl48Serum cholesterol level QTL 485blood cholesterol amount (VT:0000180)serum total cholesterol level (CMO:0000363)12960327746669029Rat
10059594Kidm46Kidney mass QTL 463.790.025kidney mass (VT:0002707)both kidneys wet weight to body weight ratio (CMO:0000340)12610757946669029Rat
61331Eau2Experimental allergic uveoretinitis QTL 20.0005uvea integrity trait (VT:0010551)experimental autoimmune uveitis score (CMO:0001504)12852542328064601Rat
1581516Cm56Cardiac mass QTL 564.20.05heart left ventricle mass (VT:0007031)heart left ventricle weight to body weight ratio (CMO:0000530)12129333307Rat

1 to 10 of 41 rows


Database
Acc Id
Source(s)
NCBI Gene 101180906 UniSTS
  304297 UniSTS