PMC136359P1 Marker Search Result - Rat Genome Database

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Marker: PMC136359P1

Symbol: PMC136359P1
Previously known as:
RGD ID: 5031316
Expected Size: 175 (bp)
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21211,665,577 - 11,665,752 (+)MAPPERmRatBN7.2
Rnor_6.01213,718,309 - 13,718,483NCBIRnor6.0
Rnor_5.01215,748,322 - 15,748,496UniSTSRnor5.0
RGSC_v3.41212,049,536 - 12,049,710UniSTSRGSC3.4
Celera1213,454,909 - 13,455,083UniSTS
Cytogenetic Map12p11UniSTS
Is Marker For: Genes:   Actb  




#
Reference Title
Reference Citation
1. UniSTS Pipeline RGD automated pipelines


 
Forward Primer TGGAATCCTGTGGCATCCATGA
Reverse Primer ATCTTCATGGTGCTAGGAGCCAG
 


The following Genes overlap with this region.    Full Report CSV TAB Printer Analysis Tools
RGD ID
Symbol
Name
Chr
Start
Stop
Species
628837Actbactin, beta121166311211666697Rat

1 to 18 of 18 rows
RefSeq Transcripts NM_031144 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AB028846 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC063166 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  EF156276 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ225285 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ226945 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ227027 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ227201 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ228068 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ228822 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ229293 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ231277 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ231503 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ231691 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ232063 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ232650 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ232682 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  V01217 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
1 to 18 of 18 rows


1 to 10 of 38 rows
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
2312418Kidm41Kidney mass QTL 413.70.0001kidney mass (VT:0002707)single kidney wet weight to body weight ratio (CMO:0000622)12119611090Rat
8552964Pigfal17Plasma insulin-like growth factor 1 level QTL 173.5blood insulin-like growth factor amount (VT:0010479)plasma insulin-like growth factor 1 level (CMO:0001299)12556449546669029Rat
7411641Foco19Food consumption QTL 1927.70.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)12556449546669029Rat
1331739Hrtrt14Heart rate QTL 143.56232heart pumping trait (VT:2000009)heart rate (CMO:0000002)12931821612829686Rat
9590147Scort7Serum corticosterone level QTL 713.610.001blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)12142110980Rat
8552912Pigfal6Plasma insulin-like growth factor 1 level QTL 65blood insulin-like growth factor amount (VT:0010479)plasma insulin-like growth factor 1 level (CMO:0001299)12556449846669029Rat
1549829Scl48Serum cholesterol level QTL 485blood cholesterol amount (VT:0000180)serum total cholesterol level (CMO:0000363)12960327746669029Rat
10059594Kidm46Kidney mass QTL 463.790.025kidney mass (VT:0002707)both kidneys wet weight to body weight ratio (CMO:0000340)12610757946669029Rat
61331Eau2Experimental allergic uveoretinitis QTL 20.0005uvea integrity trait (VT:0010551)experimental autoimmune uveitis score (CMO:0001504)12852542328064601Rat
1581516Cm56Cardiac mass QTL 564.20.05heart left ventricle mass (VT:0007031)heart left ventricle weight to body weight ratio (CMO:0000530)12129333307Rat

1 to 10 of 38 rows


Database
Acc Id
Source(s)
NCBI Gene 81822 UniSTS