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Gene: Katnb1 (katanin regulatory subunit B1) Rattus norvegicus
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Symbol: Katnb1
Name: katanin regulatory subunit B1
Description: Predicted to contribute to microtubule-severing ATPase activity. Involved in microtubule severing; positive regulation of cell death; and positive regulation of neuron projection development. Localizes to the growth cone; midbody; and neuronal cell body. Human ortholog(s) of this gene implicated in lissencephaly. Orthologous to human KATNB1 (katanin regulatory subunit B1); INTERACTS WITH 17beta-estradiol 3-benzoate; 2,3,7,8-tetrachlorodibenzodioxine; 2-methoxyethanol.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: katanin p80 (WD repeat containing) subunit B 1; katanin p80 (WD40-containing) subunit B 1; katanin p80 WD40 repeat-containing subunit B1; katanin p80 WD40-containing subunit B1; LOC291852
Orthologs:
Homo sapiens (human) : KATNB1 (katanin regulatory subunit B1)  HGNC  Alliance
Mus musculus (house mouse) : Katnb1 (katanin p80 (WD40-containing) subunit B 1)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Katnb1 (katanin regulatory subunit B1)
Pan paniscus (bonobo/pygmy chimpanzee) : KATNB1 (katanin regulatory subunit B1)
Canis lupus familiaris (dog) : KATNB1 (katanin regulatory subunit B1)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Katnb1 (katanin regulatory subunit B1)
Sus scrofa (pig) : KATNB1 (katanin regulatory subunit B1)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01910,340,027 - 10,360,319 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.01910,320,130 - 10,339,578 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41910,355,488 - 10,373,010 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11910,360,314 - 10,377,836 (-)NCBI
Celera199,809,407 - 9,826,994 (-)NCBICelera
Cytogenetic Map19p13NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
 
More on Katnb1
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1311256
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2019-10-16
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.