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Gene: Mastl (microtubule associated serine/threonine kinase-like) Rattus norvegicus

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Symbol:

Mastl

Name:

microtubule associated serine/threonine kinase-like

RGD ID:

1309186

Description:

Predicted to enable protein serine/threonine kinase activity. Predicted to be involved in several processes, including G2/M transition of mitotic cell cycle; meiotic chromosome condensation; and positive regulation of meiotic cell cycle process involved in oocyte maturation. Predicted to act upstream of or within female meiosis II and positive regulation of ubiquitin protein ligase activity. Predicted to be located in cleavage furrow; microtubule cytoskeleton; and nucleoplasm. Predicted to be active in nucleus. Human ortholog(s) of this gene implicated in thrombocytopenia. Orthologous to human MASTL (microtubule associated serine/threonine kinase like); INTERACTS WITH 1-naphthyl isothiocyanate; 2,3,7,8-tetrachlorodibenzodioxine; acetamide.

Type:

protein-coding

RefSeq Status:

PROVISIONAL

Previously known as:

LOC102553656; LOC307169; microtubule-associated serine/threonine-protein kinase-like; serine/threonine-protein kinase greatwall; serine/threonine-protein kinase greatwall-like

RGD Orthologs

Alliance Orthologs

More Info

more info ...

Latest Assembly:

GRCr8 - GRCr8 Assembly

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	17	90,158,592 - 90,195,550 (-)	NCBI		GRCr8
mRatBN7.2	17	85,250,512 - 85,287,479 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	17	85,251,997 - 85,287,353 (-)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	17	88,736,222 - 88,771,568 (-)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	17	92,571,598 - 92,606,946 (-)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	17	86,588,377 - 86,623,723 (-)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	17	89,839,562 - 89,875,855 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	17	89,742,140 - 89,876,825 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	17	91,504,296 - 91,540,607 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	17	96,722,615 - 96,757,971 (-)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	17	96,733,772 - 96,751,272 (-)	NCBI
Celera	17	83,608,795 - 83,644,003 (+)	NCBI		Celera
Cytogenetic Map	17	q12.3	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

Scimitar Anomaly, Multiple Cardiac Malformations, and Craniofacial and Central Nervous System Abnormalities (ISO)

thrombocytopenia (ISO)

Thrombocytopenia 2 (ISO)

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

1-naphthyl isothiocyanate (EXP)

17beta-estradiol (ISO)

2,3,7,8-tetrachlorodibenzodioxine (EXP,ISO)

3-isobutyl-1-methyl-7H-xanthine (ISO)

3-methylcholanthrene (ISO)

4,4'-sulfonyldiphenol (ISO)

acetamide (EXP)

acrylamide (EXP)

aflatoxin B1 (EXP,ISO)

arsane (ISO)

arsenic atom (ISO)

azathioprine (ISO)

benzo[a]pyrene (ISO)

benzo[a]pyrene diol epoxide I (ISO)

bisphenol A (EXP,ISO)

cadmium dichloride (EXP)

caffeine (ISO)

cannabidiol (ISO)

carbon nanotube (ISO)

chlorpyrifos (ISO)

cisplatin (ISO)

copper(II) sulfate (ISO)

coumarin (ISO)

coumestrol (ISO)

cyclosporin A (ISO)

dexamethasone (ISO)

dichloroacetic acid (ISO)

diclofenac (ISO)

diquat (ISO)

doxorubicin (ISO)

Enterolactone (ISO)

enzyme inhibitor (ISO)

flutamide (EXP)

FR900359 (ISO)

furan (EXP)

genistein (ISO)

Heliotrine (EXP)

indometacin (ISO)

lead diacetate (ISO)

lidocaine (EXP)

methamphetamine (EXP)

okadaic acid (ISO)

ozone (ISO)

paracetamol (ISO)

phenformin (EXP)

pravastatin (EXP,ISO)

quercetin (ISO)

quinolin-8-ol (ISO)

resveratrol (ISO)

rotenone (EXP,ISO)

SCH 23390 (EXP)

senecionine (EXP)

Senkirkine (EXP)

sodium arsenite (ISO)

sunitinib (ISO)

tetrachloromethane (ISO)

thapsigargin (ISO)

thioacetamide (EXP)

titanium dioxide (ISO)

trimellitic anhydride (ISO)

troglitazone (ISO)

trovafloxacin (ISO)

tungsten (ISO)

valproic acid (ISO)

zaragozic acid A (EXP,ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

biological_process (ND)

female meiosis II (IEA,ISO)

G2/M transition of mitotic cell cycle (ISO)

intracellular signal transduction (IBA)

meiotic cell cycle (ISO)

meiotic chromosome condensation (ISO)

meiotic spindle assembly (ISO)

positive regulation of meiotic cell cycle process involved in oocyte maturation (ISO)

positive regulation of ubiquitin protein ligase activity (ISO)

regulation of cell cycle (ISO)

Cellular Component

centrosome (ISO)

cleavage furrow (ISO)

meiotic spindle (ISO)

nucleoplasm (ISO)

nucleus (IBA,ISO)

Molecular Function

ATP binding (IEA)

kinase activity (IEA,ISO)

nucleotide binding (IEA)

protein binding (ISO)

protein kinase activity (IEA)

protein serine/threonine kinase activity (IBA,IEA,ISO)

transferase activity (IEA)

transmembrane transporter binding (IEA)

References

References - curated

#	Reference Title	Reference Citation
1.	FLJ14813 missense mutation: a candidate for autosomal dominant thrombocytopenia on human chromosome 10.	Gandhi MJ, etal., Hum Hered. 2003;55(1):66-70.
2.	Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium.	Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
3.	Rat ISS GO annotations from MGI mouse gene data--August 2006	MGD data from the GO Consortium
4.	OMIM Disease Annotation Pipeline	OMIM Disease Annotation Pipeline
5.	GOA pipeline	RGD automated data pipeline
6.	ClinVar Automated Import and Annotation Pipeline	RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
7.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions
8.	Comprehensive gene review and curation	RGD comprehensive gene curation

Additional References at PubMed

PMID:14760703	PMID:20538976	PMID:20818157	PMID:23843240	PMID:25246615

Genomics

Comparative Map Data

Mastl
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	17	90,158,592 - 90,195,550 (-)	NCBI		GRCr8
mRatBN7.2	17	85,250,512 - 85,287,479 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	17	85,251,997 - 85,287,353 (-)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	17	88,736,222 - 88,771,568 (-)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	17	92,571,598 - 92,606,946 (-)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	17	86,588,377 - 86,623,723 (-)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	17	89,839,562 - 89,875,855 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	17	89,742,140 - 89,876,825 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	17	91,504,296 - 91,540,607 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	17	96,722,615 - 96,757,971 (-)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	17	96,733,772 - 96,751,272 (-)	NCBI
Celera	17	83,608,795 - 83,644,003 (+)	NCBI		Celera
Cytogenetic Map	17	q12.3	NCBI

MASTL
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	10	27,154,479 - 27,187,953 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	10	27,154,824 - 27,187,953 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	10	27,444,281 - 27,476,882 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	10	27,484,298 - 27,515,854 (+)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	10	27,484,297 - 27,515,854	NCBI
Celera	10	27,160,210 - 27,192,290 (+)	NCBI		Celera
Cytogenetic Map	10	p12.1	NCBI
HuRef	10	27,112,454 - 27,144,522 (+)	NCBI		HuRef
CHM1_1	10	27,443,697 - 27,475,780 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	10	27,184,483 - 27,217,949 (+)	NCBI		T2T-CHM13v2.0

Mastl
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	2	23,006,549 - 23,046,036 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	2	23,005,618 - 23,046,036 (-)	Ensembl		GRCm39 Ensembl
GRCm38	2	23,116,539 - 23,156,024 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	2	23,115,606 - 23,156,024 (-)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	2	22,972,064 - 23,011,544 (-)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	2	22,940,074 - 22,977,925 (-)	NCBI		MGSCv36	mm8
Celera	2	22,848,204 - 22,887,677 (-)	NCBI		Celera
Cytogenetic Map	2	A3	NCBI
cM Map	2	15.23	NCBI

Mastl
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955429	2,591,203 - 2,617,784 (+)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955429	2,591,173 - 2,617,084 (+)	NCBI	ChiLan1.0	ChiLan1.0

MASTL
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	8	39,783,630 - 39,816,414 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	10	39,788,957 - 39,821,737 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	10	27,264,475 - 27,296,085 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	10	27,626,892 - 27,658,180 (+)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	10	27,626,892 - 27,658,180 (+)	Ensembl	panpan1.1		panPan2

MASTL
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	2	6,829,309 - 6,863,876 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	2	6,830,168 - 6,863,568 (+)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	2	5,582,408 - 5,616,987 (+)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	2	5,018,871 - 5,053,474 (+)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	2	5,019,818 - 5,053,476 (+)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	2	4,395,980 - 4,430,831 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	2	4,472,486 - 4,507,336 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	2	4,639,192 - 4,673,999 (+)	NCBI		UU_Cfam_GSD_1.0

Mastl
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024409344	26,109,771 - 26,141,730 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936484	2,276,744 - 2,306,035 (-)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936484	2,276,463 - 2,306,119 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

MASTL
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	10	48,856,072 - 48,880,475 (+)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	10	48,855,895 - 48,877,504 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	10	54,162,099 - 54,186,773 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

MASTL
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	9	26,752,354 - 26,786,802 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	9	26,753,331 - 26,787,019 (+)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666051	32,761,322 - 32,796,246 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Mastl
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624796	2,216,034 - 2,243,962 (+)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624796	2,215,951 - 2,244,307 (+)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants

Variants in Mastl
225 total Variants

miRNA Target Status (No longer updated)

Predicted Target Of

	Summary Value
Count of predictions:	269
Count of miRNA genes:	182
Interacting mature miRNAs:	203
Transcripts:	ENSRNOT00000023698
Prediction methods:	Microtar, Miranda, Rnahybrid
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (GRCr8)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
8694181	Bw151	Body weight QTL 151	4.36	0.001	body mass (VT:0001259)	body weight gain (CMO:0000420)	17	48560935	86533673	Rat
1358295	Aocep1	Aortic cell protein QTL 1	6.1	7e-07	thoracic aorta cellular protein amount (VT:0010598)	aortic cell percentage	17	40990005	85990005	Rat
7411575	Bw140	Body weight QTL 140	30.2	0.001	body mass (VT:0001259)	body weight gain (CMO:0000420)	17	48560935	86533673	Rat
2317045	Aia11	Adjuvant induced arthritis QTL 11	4.06		joint integrity trait (VT:0010548)	left rear ankle joint diameter (CMO:0002149)	17	60781426	86533673	Rat
7411577	Bw141	Body weight QTL 141		0.001	body mass (VT:0001259)	body weight gain (CMO:0000420)	17	62619516	86533673	Rat
4889894	Eae33	Experimental allergic encephalomyelitis QTL 33	5.2	0.0001	nervous system integrity trait (VT:0010566)	experimental autoimmune encephalomyelitis severity score (CMO:0001419)	17	50909099	86022412	Rat
2317038	Ginf3	Gastrointestinal inflammation QTL 3	2.89	0.005	liver integrity trait (VT:0010547)	liver granuloma severity score (CMO:0002157)	17	49920154	86533673	Rat
2303580	Gluco49	Glucose level QTL 49	2		blood glucose amount (VT:0000188)	blood glucose level (CMO:0000046)	17	50040271	86533673	Rat

Markers in Region

BE107567

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	17	85,285,767 - 85,285,939 (-)	MAPPER	mRatBN7.2
Rnor_6.0	17	89,841,063 - 89,841,234	NCBI	Rnor6.0
Rnor_6.0	17	89,743,564 - 89,743,735	NCBI	Rnor6.0
Rnor_5.0	17	91,505,815 - 91,505,986	UniSTS	Rnor5.0
Rnor_5.0	17	91,408,316 - 91,408,487	UniSTS	Rnor5.0
RGSC_v3.4	17	96,756,386 - 96,756,557	UniSTS	RGSC3.4
Celera	17	83,610,209 - 83,610,380	UniSTS
RH 3.4 Map	17	841.1	UniSTS
Cytogenetic Map	17	q12.3	UniSTS

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Download All Expressed Objects for this Gene

alimentary part of gastrointestinal system	appendage	circulatory system	ectoderm	endocrine system	endoderm	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	mesenchyme	mesoderm	nervous system	renal system	reproductive system	respiratory system
9	11	49	113	91	90	59	25	59	6	218	97	93	45	60	31

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_001107369	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006254340	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006254341	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006254342	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017600574	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063276502	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_001841735	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_596839	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	CH474100	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	FQ224658	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAXUCZ010000017	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSRNOT00000077899 ⟹ ENSRNOP00000074792

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	17	85,251,997 - 85,287,353 (-)	Ensembl
Rnor_6.0 Ensembl	17	89,742,140 - 89,876,825 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000106298 ⟹ ENSRNOP00000085820

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	17	85,252,045 - 85,287,317 (-)	Ensembl

RefSeq Acc Id:

NM_001107369 ⟹ NP_001100839

RefSeq Status:

PROVISIONAL

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	17	90,160,068 - 90,195,424 (-)	NCBI
mRatBN7.2	17	85,251,997 - 85,287,353 (-)	NCBI
Rnor_6.0	17	89,839,649 - 89,874,391 (+)	NCBI
Rnor_5.0	17	91,504,296 - 91,540,607 (+)	NCBI
RGSC_v3.4	17	96,722,615 - 96,757,971 (-)	RGD
Celera	17	83,608,795 - 83,644,003 (+)	RGD

Sequence:

show sequence

GGCGAAAGCATTTGAATCTACTTGGCGGGAGTTAGTACTGTAGTGCGAACTGTTCAGCTATGGA
GTCCGCCTCGGGAAGTGAGGAGAATGAAGAAGGTGCGGCGACAGAGAAATGCGTGAATAGGATC
CCAGTACCAAGACCACCCTCCATTGAAGAATTCACTATAGTGAAGCCCATTAGCCGTGGCGCAT
TCGGGAAAGTGTACCTGGGACAGAAAGGCAGCAAGTTGTACGCGGTGAAGGTTGTCAAAAAAGC
AGACATGATCAATAAAAATATGACTCATCAGGTACAGGCTGAGAGAGATGCCCTGGCACTGAGC
AAAAGCCCTTTTGTTGTGCATCTGTATTACTCACTACAGTCAGCAAGCAACGTCTACTTGATAA
TGGAATATCTTATTGGTGGAGATGTCAAGTCTCTCCTACATATATATGGTTATTTTGATGAAGA
GATGGCTATAAAATATACTTCTGAAGTAGCATTGGCTTTAGACTACCTGCACAGACATGGCATC
ATCCACAGGGATTTGAAACCGGACAATATGCTTATTTCCAATGAGGGTCATATTAAGCTGACAG
ATTTTGGCCTTTCCAAAGTTACTCTGAATAGAGACATCAATATGATGGATATTCTCACGACACC
ATCAATGTCTAAACCTAAGCAAGATTATTCGAGAACCCCAGGACAAGTCTTATCTCTCATCAGT
TCTTTGGGATTTTTCACACCAGTTGGAGAAAAAGATCAAGACTCTGCAAATGTGTTTTCAGCAC
CTAAGTCTGAAGCACAACTTTCTCAAGGATCAATTTGTCCTATGTCCATAGATCAGAAGGAGCC
AATTTCTTATTCTAGCAAACTACTAAAATCATGTTTTGAAACACTTGCATCCAATCCAGAAATA
CCTGTGAAATGTCTGACTTCTAATCTACTCCAGTGTAGGAAAAGACTGGGTACCTCAAGTACTA
GTAGCCAGTCTCATACCTTCGTATCCAGTGTGGAGTCAGAATGTCACAGCAGTCCCAAATGGGA
GAAAGACTGCCAGAGTGCCAAGCCATCAAGTACAATGATGAGCTGGAGTGCCGGTGAAATGCCG
TATGCAAAATCTGTAAGTGCCATCGAGACAAAAACGGATTTGGAATTAGCACTTTCTCCCATTC
ATGACAGCAGTAACATTCCTCCCACTGGAAGAAACTACATGACCCTCCCTAGAAAGTGCTTCTC
CAGGGAAATCTCTTGGGAGGCAAGAGAACCGGATATAAATAATGAGACCATGACCATTGACGAG
GTCAGTTTCTGTCAGTCCAATCATTGGGCTGTAAATTCTAGTGCTACATCTGAAGAACACCTCT
GTAAAAGAAACTGTAAAAGAAATTTCCACTTGGTTGACTCCAGTCCTTGTCAGGAAATTATACA
AAGTAAAAAAAACTGTATAGAATATGAAGCCAATAAGGAAAAGACAGGCTGTTGTGCAAATCAA
GCTACAGGCTTGACAGCCCAAGTCCAGAACCTGAAGCTATCAGTGTGCAAAAGTCAGCAACATG
ACTATGCTAATAAGGAGAACACTGTCACCTATTTAACTGACAGACGAACCCCAGAAGAACTGCA
TATACCAACAATAGCAAAGAACCTCATGTCTGAGCTCGATGAAGACTGTGAGCTGAGCAGTAAA
AAAGACTGCCTCCATTCTAATTCCGTATGTTCTGATGAGGATAGAGCTCCTAAAACTGTCTGTG
TAGACTCTGATTCATCTTTTCCTGGAGTGTCTATGATGGAAAGTTCACTGGAAATTCAGGCCTT
AGAGCCAGATAAAAGCATCAGAGACTACTCTTTTGAAGAACCAAATACTGAAGATCTACTTATG
TTACCAAAATGCCAAGAAAATTCCTTGCCAAAAGATGACTGGCATGCTTCTATCCAAGACAGTA
ACCAAATGTTAGCTCCTCCTTCAAAGGCGCCAAAAACATTCGCCTCTAAAACCAATGTCGTGGC
TTTTCGAAGTTTTAGCAGTCACATTAATGCATCCAGTAATTCAGAACCATCCAAAGTGAGCACA
ACTTCTTTAGACACTATGGACATTTCCTGTGACTACAGTGGTTCGTGTCCCATGGCTGTGACCC
CTACTGAGAAAGGGAGGGCCTGTGTGTCACATCAGACTCCGAGTCAGGTCAAGTTGGGAACATC
ATACAGAACTCCAAAGAGTGTGAGAAGAGGGCCACCCCCAGTAGATGATGGACGGATTCTAGGA
ACCCCGGATTACCTGGCACCTGAGCTCCTACTGGGAGCCGCCCATGGTCCTGCAGTAGACTGGT
GGGCACTTGGAGTCTGCTTGTTTGAATTTCTAACAGGAATCCCCCCTTTCAATGATGAAACACC
ACAGCAAGTATTCCAGAATATTCTAAAAAGAGATATCCCGTGGCCAGAAGGTGAAGAAAAGCTA
TCTGATAAGTCTCAAAGTGCGATGGATATGCTGTTAACCATTGATGACACAAAGAGAGCTGGGA
TGAAAGAACTGAAACATCATCCTCTCTTCAGTGAAGTGGACTGGGAGAATCTGCAGCATCAGAC
TATGCCTTTCGTGCCCCAACCAGACAACGAAACAGATACATCCTACTTTGAAGCCAGGAACAAT
GCTCAGCATCTGACCATATCTGGGTTCAGTCTGTAGCACATGCATGCCATTTCTATCTAACTTG
TGATATAGAATTTTAACACTAGATTCATCTACACGGAATAAGTCATTATTGTACCGAGGCTAAA
CAGTTTTAATGAGTACAACAGCTTTTACAGAGTTAAAATACTGTAAAAAATATAAACAGTAATC
TCTACCTTAGAACTGTACATAAGGCATCATGGCTTTTTTCATCTTATTTATTCACTGCACTTTA
TGAAGAGCAATGTCTCAATAAACTAAAACAGCACTACCACTCTAAACAGAGGGGATGAACCATA
AGCTTGTATGTATCTGTTGATGTTAGTTCTGTTCACTTTGGTGTT

hide sequence

RefSeq Acc Id:

XM_006254340 ⟹ XP_006254402

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	17	90,158,592 - 90,195,550 (-)	NCBI
mRatBN7.2	17	85,250,512 - 85,287,479 (-)	NCBI
Rnor_6.0	17	89,839,562 - 89,875,855 (+)	NCBI
Rnor_5.0	17	91,504,296 - 91,540,607 (+)	NCBI

Sequence:

show sequence

TGCCGCCAGCCCCACCCATCTATGCAGGCTTACAGTGAGCCAGCAGAGCGCAGGCGCATGGTGA
CGTCACGGGAGGCATCCGGCGTAGGCGAAAGCATTTGAATCTACTTGGCGGGAGTTAGTACTGT
AGTGCGAACTGTTCAGCTATGGAGTCCGCCTCGGGAAGTGAGGAGAATGAAGAAGGTGCGGCGA
CAGAGAAATGCGTGAATAGGATCCCAGTACCAAGACCACCCTCCATTGAAGAATTCACTATAGT
GAAGCCCATTAGCCGTGGCGCATTCGGGAAAGTGTACCTGGGACAGAAAGGCAGCAAGTTGTAC
GCGGTGAAGGTTGTCAAAAAAGCAGACATGATCAATAAAAATATGACTCATCAGGTACAGGCTG
AGAGAGATGCCCTGGCACTGAGCAAAAGCCCTTTTGTTGTGCATCTGTATTACTCACTACAGTC
AGCAAGCAACGTCTACTTGATAATGGAATATCTTATTGGTGGAGATGTCAAGTCTCTCCTACAT
ATATATGGTTATTTTGATGAAGAGATGGCTATAAAATATACTTCTGAAGTAGCATTGGCTTTAG
ACTACCTGCACAGACATGGCATCATCCACAGGGATTTGAAACCGGACAATATGCTTATTTCCAA
TGAGGGTCATATTAAGCTGACAGATTTTGGCCTTTCCAAAGTTACTCTGAATAGAGACATCAAT
ATGATGGATATTCTCACGACACCATCAATGTCTAAACCTAAGCAAGATTATTCGAGAACCCCAG
GACAAGTCTTATCTCTCATCAGTTCTTTGGGATTTTTCACACCAGTTGGAGAAAAAGATCAAGA
CTCTGCAAATGTGTTTTCAGCACCTAAGTCTGAAGCACAACTTTCTCAAGGATCAATTTGTCCT
ATGTCCATAGATCAGAAGGAGCCAGTTTCTTATTCTAGCAAACTACTAAAATCATGTTTTGAAA
CACTTGCATCCAATCCAGAAATACCTGTGAAATGTCTGACTTCTAATCTACTCCAGTGTAGGAA
AAGACTGGGTACCTCAAGTACTAGTAGCCAGTCTCATACCTTCGTATCCAGTGTGGAGTCAGAA
TGTCACAGCAGTCCCAAATGGGAGAAAGACTGCCAGAGTGCCAAGCCATCAAGTACAATGATGA
GCTGGAGTGCCGGTGAAATGCCGTATGCAAAATCTGTAAGTGCCATCGAGACAAAAACGGATTT
GGAATTAGCACTTTCTCCCATTCATGACAGCAGTAACATTCCTCCCACTGGAAGAAACTACATG
ACCCTCCCTAGAAAGTGCTTCTCCAGGGAAATCTCTTGGGAGGCAAGAGAACCGGATATAAATA
ATGAGACCATGACCATTGACGAGGTCAGTTTCTGTCAGTCCAATCATTGGGCTGTAAATTCTAG
TGCTACATCTGAAGAACACCTCTGTAAAAGAAACTGTAAAAGAAATTTCCACTTGGTTGACTCC
AGTCCTTGTCAGGAAATTATACAAAGTAAAAAAAACTGTATAGAATATGAAGCCAATAAGGAAA
AGACAGGCTGTTGTGCAAATCAAGCTACAGGCTTGACAGCCCAAGTCCAGAACCTGAAGCTATC
AGTGTGCAAAAGTCAGCAACATGACTATGCTAATAAGGAGAACACTGTCACCTATTTAACTGAC
AGACGAACCCCAGAAGAACTGCATATACCAACAATAGCAAAGAACCTCATGTCTGAGCTCGATG
AAGACTGTGAGCTGAGCAGTAAAAAAGACTGCCTCCATTCTAATTCCGTATGTTCTGATGAGGA
TAGAGCTCCTAAAACTGTCTGTGTAGACTCTGATTCATCTTTTCCTGGAGTGTCTATGATGGAA
AGTTCACTGGAAATTCAGGCCTTAGAGCCAGATAAAAGCATCAGAGACTACTCTTTTGAAGAAC
CAAATACTGAAGATCTACTTATGTTACCAAAATGCCAAGAAAATTCCTTGCCAAAAGATGACTG
GCATGCTTCTATCCAAGACAGTAACCAAATGTTAGCTCCTCCTTCAAAGGCGCCAAAAACATTC
GCCTCTAAAACCAATGTCGTGGCTTTTCGAAGTTTTAGCAGTCACATTAATGCATCCAGTAATT
CAGAACCATCCAAAGTGAGCACAACTTCTTTAGACACTATGGACATTTCCTGTGACTACAGTGG
TTCGTGTCCCATGGCTGTGACCCCTACTGAGAAAGGGAGGGCCTGTGTGTCACATCAGCAGACT
CCGAGTCAGGTCAAGTTGGGAACATCATACAGAACTCCAAAGAGTGTGAGAAGAGGGCCACCCC
CAGTAGATGATGGACGGATTCTAGGAACCCCGGATTACCTGGCACCTGAGCTCCTACTGGGAGC
CGCCCATGGTCCTGCAGTAGACTGGTGGGCACTTGGAGTCTGCTTGTTTGAATTTCTAACAGGA
ATCCCCCCTTTCAATGATGAAACACCACAGCAAGTATTCCAGAATATTCTAAAAAGAGATATCC
CGTGGCCAGAAGGTGAAGAAAAGCTATCTGATAAGTCTCAAAGTGCGATGGATATGCTGTTAAC
CATTGATGACACAAAGAGAGCTGGGATGAAAGAACTGAAACATCATCCTCTCTTCAGTGAAGTG
GACTGGGAGAATCTGCAGCATCAGACTATGCCTTTCGTGCCCCAACCAGACAACGAAACAGATA
CATCCTACTTTGAAGCCAGGAACAATGCTCAGCATCTGACCATATCTGGGTTCAGTCTGTAGCA
CATGCATGCCATTTCTATCTAACTTGTGATATAGAATTTTAACACTAGATTCATCTACACGGAA
TAAGTCATTATTGTACCGAGGCTAAACAGTTTTAATGAGTACAACAGCTTTTACAGAGTTAAAA
TACTGTAAAAAATATAAACAGTAATCTCTACCTTAGAACTGTACATAAGGCATCATGGCTTTTT
TCATCTTATTTATTCACTGCACTTTATGAAGAGCAATGTCTCAATAAACTAAAACAGCACTACC
ACTCTAAACAGAGGGGATGAACCATAAGCTTGTATGTATCTGTTGATGTTAGTTCTGTTCACTT
TGGTGTTTATTTGCACATGGTTACATCCTAAGCTGTTCTCGGGGCTGTCATATGAGACAAACAT
GACTGAAAATCGTTTGACCCAGACATCGTGGTGGAAGTTCCCATATTCAAGAGCAGATGTAACA
CAGGATTATGACTGCAATTTGAAGACTCAGGCCAGCCAGGACTGTATTTCTCATCAGTATGTCT
CTGCTGAGGGTGAACTAGTCAAAAGAATTAAGGTTCTAACTCATCTTACTTATGATGGAATCTC
ACTGCCTTGAATGCTCTTGGTGCTTCCCTCTACAATTCCTGCTTGTTTAAACGGGTAGTGGAAA
GGCTGGGTGTGATACTTTAAGTGATTTTAATAGCTTCTTCACTTTTAATAGAAAAATTTATACT
TTACATCAGATCCTTTCAAACACTGCGAGAGACAAATAGTAACAATTATAATTACTTGTAACTG
TAACTAGTGACTTCAGTATTGGTCTTTTCAAGTATGTACTAAGACTCAGGTCAAAAGTCTTATC
TCAAACTAATTGAGGCTTTTGATATTTCCCTAGAAGAGCAAAATTAAGACGTACGTGTACCATA
GGGAAGGTTTTTGCTAATGCCTGCTTGCATACTGACTTTAGTGCTTCCACTGCCACCCAGTCAC
AGCCCAGATAGAATACAGTTTGCAAAGATGCATAATCAGTGCTGGGTATAGAGTCCTTACTGTA
CTTATTTTAGTAAAGACTACTTAGTGTTCCAGTTACCTTTTTTACTAAAAATATTCAAATATAT
TTACAGCTTCCTTTACTAAGACTCACTTTCAGGTGACAGCATAATTCTACAGTCTGTTTACTCT
ATCATCCTCTTAGAGTGTTTTCAAGATTAGAAAGAAACCTTTAGAATCAAAAAAATACCTAAAT
GACTGCTACTAAACTGAAATGATGTGGGCAGGTTAAAAGTGAGCATGAAGATGCTGGAGGGAGC
AAATGCTTAGTGTGCCAAGGACCCCGTGTTCAATCCCCACCATACACAAACAGTAATTGAGGAA
TTAGGATAAGCAGAGCCACATTAATAAACCTGAGGTTCACAAGTCATGGCTTACCAGAGCACTG
GACCCCAGCTATGGGTATTGTTAAAAGTGAGTCTGCAGAAGCAAGCCCCTAGTGGCTTCTTAAA
TTAAATCATTGGACAATTGGTTATAGTAAAATTAAATTCTGCTGTGGATCCTTGAGAGTTCCTG
GCTTGCCTGGGTGGGGCCACATGAATATATCACTGGAATAGGAAAGTCTGTAAATGGATGGCTG
AATAAACAGGGAAACATATGTAAGTATGCAGAAGAGAAGGATGGGAAGACACTATAGTTTTTGT
AAAATGCTTTTTTCTACTTTCCCTGTTTTCACAGAGTGAATCATAAACACTTTGCACATTTATG
TTTCATTTTCTTTTACTTGTATGTACAGAATATGATTTTAAAAAATTATTTCTCCTTTCAAGA

hide sequence

RefSeq Acc Id:

XM_006254341 ⟹ XP_006254403

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	17	90,158,592 - 90,195,550 (-)	NCBI
mRatBN7.2	17	85,250,512 - 85,287,479 (-)	NCBI
Rnor_6.0	17	89,839,562 - 89,875,855 (+)	NCBI
Rnor_5.0	17	91,504,296 - 91,540,607 (+)	NCBI

Sequence:

show sequence

TGCCGCCAGCCCCACCCATCTATGCAGGCTTACAGTGAGCCAGCAGAGCGCAGGCGCATGGTGA
CGTCACGGGAGGCATCCGGCGTAGGCGAAAGCATTTGAATCTACTTGGCGGGAGTTAGTACTGT
AGTGCGAACTGTTCAGCTATGGAGTCCGCCTCGGGAAGTGAGGAGAATGAAGAAGGTGCGGCGA
CAGAGAAATGCGTGAATAGGATCCCAGTACCAAGACCACCCTCCATTGAAGAATTCACTATAGT
GAAGCCCATTAGCCGTGGCGCATTCGGGAAAGTGTACCTGGGACAGAAAGGCAGCAAGTTGTAC
GCGGTGAAGATAATGGAATATCTTATTGGTGGAGATGTCAAGTCTCTCCTACATATATATGGTT
ATTTTGATGAAGAGATGGCTATAAAATATACTTCTGAAGTAGCATTGGCTTTAGACTACCTGCA
CAGACATGGCATCATCCACAGGGATTTGAAACCGGACAATATGCTTATTTCCAATGAGGGTCAT
ATTAAGCTGACAGATTTTGGCCTTTCCAAAGTTACTCTGAATAGAGACATCAATATGATGGATA
TTCTCACGACACCATCAATGTCTAAACCTAAGCAAGATTATTCGAGAACCCCAGGACAAGTCTT
ATCTCTCATCAGTTCTTTGGGATTTTTCACACCAGTTGGAGAAAAAGATCAAGACTCTGCAAAT
GTGTTTTCAGCACCTAAGTCTGAAGCACAACTTTCTCAAGGATCAATTTGTCCTATGTCCATAG
ATCAGAAGGAGCCAGTTTCTTATTCTAGCAAACTACTAAAATCATGTTTTGAAACACTTGCATC
CAATCCAGAAATACCTGTGAAATGTCTGACTTCTAATCTACTCCAGTGTAGGAAAAGACTGGGT
ACCTCAAGTACTAGTAGCCAGTCTCATACCTTCGTATCCAGTGTGGAGTCAGAATGTCACAGCA
GTCCCAAATGGGAGAAAGACTGCCAGAGTGCCAAGCCATCAAGTACAATGATGAGCTGGAGTGC
CGGTGAAATGCCGTATGCAAAATCTGTAAGTGCCATCGAGACAAAAACGGATTTGGAATTAGCA
CTTTCTCCCATTCATGACAGCAGTAACATTCCTCCCACTGGAAGAAACTACATGACCCTCCCTA
GAAAGTGCTTCTCCAGGGAAATCTCTTGGGAGGCAAGAGAACCGGATATAAATAATGAGACCAT
GACCATTGACGAGGTCAGTTTCTGTCAGTCCAATCATTGGGCTGTAAATTCTAGTGCTACATCT
GAAGAACACCTCTGTAAAAGAAACTGTAAAAGAAATTTCCACTTGGTTGACTCCAGTCCTTGTC
AGGAAATTATACAAAGTAAAAAAAACTGTATAGAATATGAAGCCAATAAGGAAAAGACAGGCTG
TTGTGCAAATCAAGCTACAGGCTTGACAGCCCAAGTCCAGAACCTGAAGCTATCAGTGTGCAAA
AGTCAGCAACATGACTATGCTAATAAGGAGAACACTGTCACCTATTTAACTGACAGACGAACCC
CAGAAGAACTGCATATACCAACAATAGCAAAGAACCTCATGTCTGAGCTCGATGAAGACTGTGA
GCTGAGCAGTAAAAAAGACTGCCTCCATTCTAATTCCGTATGTTCTGATGAGGATAGAGCTCCT
AAAACTGTCTGTGTAGACTCTGATTCATCTTTTCCTGGAGTGTCTATGATGGAAAGTTCACTGG
AAATTCAGGCCTTAGAGCCAGATAAAAGCATCAGAGACTACTCTTTTGAAGAACCAAATACTGA
AGATCTACTTATGTTACCAAAATGCCAAGAAAATTCCTTGCCAAAAGATGACTGGCATGCTTCT
ATCCAAGACAGTAACCAAATGTTAGCTCCTCCTTCAAAGGCGCCAAAAACATTCGCCTCTAAAA
CCAATGTCGTGGCTTTTCGAAGTTTTAGCAGTCACATTAATGCATCCAGTAATTCAGAACCATC
CAAAGTGAGCACAACTTCTTTAGACACTATGGACATTTCCTGTGACTACAGTGGTTCGTGTCCC
ATGGCTGTGACCCCTACTGAGAAAGGGAGGGCCTGTGTGTCACATCAGCAGACTCCGAGTCAGG
TCAAGTTGGGAACATCATACAGAACTCCAAAGAGTGTGAGAAGAGGGCCACCCCCAGTAGATGA
TGGACGGATTCTAGGAACCCCGGATTACCTGGCACCTGAGCTCCTACTGGGAGCCGCCCATGGT
CCTGCAGTAGACTGGTGGGCACTTGGAGTCTGCTTGTTTGAATTTCTAACAGGAATCCCCCCTT
TCAATGATGAAACACCACAGCAAGTATTCCAGAATATTCTAAAAAGAGATATCCCGTGGCCAGA
AGGTGAAGAAAAGCTATCTGATAAGTCTCAAAGTGCGATGGATATGCTGTTAACCATTGATGAC
ACAAAGAGAGCTGGGATGAAAGAACTGAAACATCATCCTCTCTTCAGTGAAGTGGACTGGGAGA
ATCTGCAGCATCAGACTATGCCTTTCGTGCCCCAACCAGACAACGAAACAGATACATCCTACTT
TGAAGCCAGGAACAATGCTCAGCATCTGACCATATCTGGGTTCAGTCTGTAGCACATGCATGCC
ATTTCTATCTAACTTGTGATATAGAATTTTAACACTAGATTCATCTACACGGAATAAGTCATTA
TTGTACCGAGGCTAAACAGTTTTAATGAGTACAACAGCTTTTACAGAGTTAAAATACTGTAAAA
AATATAAACAGTAATCTCTACCTTAGAACTGTACATAAGGCATCATGGCTTTTTTCATCTTATT
TATTCACTGCACTTTATGAAGAGCAATGTCTCAATAAACTAAAACAGCACTACCACTCTAAACA
GAGGGGATGAACCATAAGCTTGTATGTATCTGTTGATGTTAGTTCTGTTCACTTTGGTGTTTAT
TTGCACATGGTTACATCCTAAGCTGTTCTCGGGGCTGTCATATGAGACAAACATGACTGAAAAT
CGTTTGACCCAGACATCGTGGTGGAAGTTCCCATATTCAAGAGCAGATGTAACACAGGATTATG
ACTGCAATTTGAAGACTCAGGCCAGCCAGGACTGTATTTCTCATCAGTATGTCTCTGCTGAGGG
TGAACTAGTCAAAAGAATTAAGGTTCTAACTCATCTTACTTATGATGGAATCTCACTGCCTTGA
ATGCTCTTGGTGCTTCCCTCTACAATTCCTGCTTGTTTAAACGGGTAGTGGAAAGGCTGGGTGT
GATACTTTAAGTGATTTTAATAGCTTCTTCACTTTTAATAGAAAAATTTATACTTTACATCAGA
TCCTTTCAAACACTGCGAGAGACAAATAGTAACAATTATAATTACTTGTAACTGTAACTAGTGA
CTTCAGTATTGGTCTTTTCAAGTATGTACTAAGACTCAGGTCAAAAGTCTTATCTCAAACTAAT
TGAGGCTTTTGATATTTCCCTAGAAGAGCAAAATTAAGACGTACGTGTACCATAGGGAAGGTTT
TTGCTAATGCCTGCTTGCATACTGACTTTAGTGCTTCCACTGCCACCCAGTCACAGCCCAGATA
GAATACAGTTTGCAAAGATGCATAATCAGTGCTGGGTATAGAGTCCTTACTGTACTTATTTTAG
TAAAGACTACTTAGTGTTCCAGTTACCTTTTTTACTAAAAATATTCAAATATATTTACAGCTTC
CTTTACTAAGACTCACTTTCAGGTGACAGCATAATTCTACAGTCTGTTTACTCTATCATCCTCT
TAGAGTGTTTTCAAGATTAGAAAGAAACCTTTAGAATCAAAAAAATACCTAAATGACTGCTACT
AAACTGAAATGATGTGGGCAGGTTAAAAGTGAGCATGAAGATGCTGGAGGGAGCAAATGCTTAG
TGTGCCAAGGACCCCGTGTTCAATCCCCACCATACACAAACAGTAATTGAGGAATTAGGATAAG
CAGAGCCACATTAATAAACCTGAGGTTCACAAGTCATGGCTTACCAGAGCACTGGACCCCAGCT
ATGGGTATTGTTAAAAGTGAGTCTGCAGAAGCAAGCCCCTAGTGGCTTCTTAAATTAAATCATT
GGACAATTGGTTATAGTAAAATTAAATTCTGCTGTGGATCCTTGAGAGTTCCTGGCTTGCCTGG
GTGGGGCCACATGAATATATCACTGGAATAGGAAAGTCTGTAAATGGATGGCTGAATAAACAGG
GAAACATATGTAAGTATGCAGAAGAGAAGGATGGGAAGACACTATAGTTTTTGTAAAATGCTTT
TTTCTACTTTCCCTGTTTTCACAGAGTGAATCATAAACACTTTGCACATTTATGTTTCATTTTC
TTTTACTTGTATGTACAGAATATGATTTTAAAAAATTATTTCTCCTTTCAAGA

hide sequence

RefSeq Acc Id:

XM_063276502 ⟹ XP_063132572

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	17	90,158,592 - 90,195,550 (-)	NCBI

Protein Sequences


Protein RefSeqs	NP_001100839	(Get FASTA)	NCBI Sequence Viewer
	XP_006254402	(Get FASTA)	NCBI Sequence Viewer
	XP_006254403	(Get FASTA)	NCBI Sequence Viewer
	XP_063132572	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	EDL83930	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSRNOP00000074792
	ENSRNOP00000074792.1
	ENSRNOP00000085820
	ENSRNOP00000085820.1

RefSeq Acc Id:

NP_001100839 ⟸ NM_001107369

- UniProtKB:

A6KRZ2 (UniProtKB/TrEMBL), D4A355 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MESASGSEENEEGAATEKCVNRIPVPRPPSIEEFTIVKPISRGAFGKVYLGQKGSKLYAVKVVK
KADMINKNMTHQVQAERDALALSKSPFVVHLYYSLQSASNVYLIMEYLIGGDVKSLLHIYGYFD
EEMAIKYTSEVALALDYLHRHGIIHRDLKPDNMLISNEGHIKLTDFGLSKVTLNRDINMMDILT
TPSMSKPKQDYSRTPGQVLSLISSLGFFTPVGEKDQDSANVFSAPKSEAQLSQGSICPMSIDQK
EPISYSSKLLKSCFETLASNPEIPVKCLTSNLLQCRKRLGTSSTSSQSHTFVSSVESECHSSPK
WEKDCQSAKPSSTMMSWSAGEMPYAKSVSAIETKTDLELALSPIHDSSNIPPTGRNYMTLPRKC
FSREISWEAREPDINNETMTIDEVSFCQSNHWAVNSSATSEEHLCKRNCKRNFHLVDSSPCQEI
IQSKKNCIEYEANKEKTGCCANQATGLTAQVQNLKLSVCKSQQHDYANKENTVTYLTDRRTPEE
LHIPTIAKNLMSELDEDCELSSKKDCLHSNSVCSDEDRAPKTVCVDSDSSFPGVSMMESSLEIQ
ALEPDKSIRDYSFEEPNTEDLLMLPKCQENSLPKDDWHASIQDSNQMLAPPSKAPKTFASKTNV
VAFRSFSSHINASSNSEPSKVSTTSLDTMDISCDYSGSCPMAVTPTEKGRACVSHQTPSQVKLG
TSYRTPKSVRRGPPPVDDGRILGTPDYLAPELLLGAAHGPAVDWWALGVCLFEFLTGIPPFNDE
TPQQVFQNILKRDIPWPEGEEKLSDKSQSAMDMLLTIDDTKRAGMKELKHHPLFSEVDWENLQH
QTMPFVPQPDNETDTSYFEARNNAQHLTISGFSL

hide sequence

RefSeq Acc Id:	XP_006254402 ⟸ XM_006254340
- Peptide Label:	isoform X1
- UniProtKB:	D4A355 (UniProtKB/TrEMBL)
- Sequence:	show sequence MESASGSEENEEGAATEKCVNRIPVPRPPSIEEFTIVKPISRGAFGKVYLGQKGSKLYAVKVVK KADMINKNMTHQVQAERDALALSKSPFVVHLYYSLQSASNVYLIMEYLIGGDVKSLLHIYGYFD EEMAIKYTSEVALALDYLHRHGIIHRDLKPDNMLISNEGHIKLTDFGLSKVTLNRDINMMDILT TPSMSKPKQDYSRTPGQVLSLISSLGFFTPVGEKDQDSANVFSAPKSEAQLSQGSICPMSIDQK EPVSYSSKLLKSCFETLASNPEIPVKCLTSNLLQCRKRLGTSSTSSQSHTFVSSVESECHSSPK WEKDCQSAKPSSTMMSWSAGEMPYAKSVSAIETKTDLELALSPIHDSSNIPPTGRNYMTLPRKC FSREISWEAREPDINNETMTIDEVSFCQSNHWAVNSSATSEEHLCKRNCKRNFHLVDSSPCQEI IQSKKNCIEYEANKEKTGCCANQATGLTAQVQNLKLSVCKSQQHDYANKENTVTYLTDRRTPEE LHIPTIAKNLMSELDEDCELSSKKDCLHSNSVCSDEDRAPKTVCVDSDSSFPGVSMMESSLEIQ ALEPDKSIRDYSFEEPNTEDLLMLPKCQENSLPKDDWHASIQDSNQMLAPPSKAPKTFASKTNV VAFRSFSSHINASSNSEPSKVSTTSLDTMDISCDYSGSCPMAVTPTEKGRACVSHQQTPSQVKL GTSYRTPKSVRRGPPPVDDGRILGTPDYLAPELLLGAAHGPAVDWWALGVCLFEFLTGIPPFND ETPQQVFQNILKRDIPWPEGEEKLSDKSQSAMDMLLTIDDTKRAGMKELKHHPLFSEVDWENLQ HQTMPFVPQPDNETDTSYFEARNNAQHLTISGFSL hide sequence

RefSeq Acc Id:	XP_006254403 ⟸ XM_006254341
- Peptide Label:	isoform X2
- UniProtKB:	D4A355 (UniProtKB/TrEMBL)
- Sequence:	show sequence MESASGSEENEEGAATEKCVNRIPVPRPPSIEEFTIVKPISRGAFGKVYLGQKGSKLYAVKIME YLIGGDVKSLLHIYGYFDEEMAIKYTSEVALALDYLHRHGIIHRDLKPDNMLISNEGHIKLTDF GLSKVTLNRDINMMDILTTPSMSKPKQDYSRTPGQVLSLISSLGFFTPVGEKDQDSANVFSAPK SEAQLSQGSICPMSIDQKEPVSYSSKLLKSCFETLASNPEIPVKCLTSNLLQCRKRLGTSSTSS QSHTFVSSVESECHSSPKWEKDCQSAKPSSTMMSWSAGEMPYAKSVSAIETKTDLELALSPIHD SSNIPPTGRNYMTLPRKCFSREISWEAREPDINNETMTIDEVSFCQSNHWAVNSSATSEEHLCK RNCKRNFHLVDSSPCQEIIQSKKNCIEYEANKEKTGCCANQATGLTAQVQNLKLSVCKSQQHDY ANKENTVTYLTDRRTPEELHIPTIAKNLMSELDEDCELSSKKDCLHSNSVCSDEDRAPKTVCVD SDSSFPGVSMMESSLEIQALEPDKSIRDYSFEEPNTEDLLMLPKCQENSLPKDDWHASIQDSNQ MLAPPSKAPKTFASKTNVVAFRSFSSHINASSNSEPSKVSTTSLDTMDISCDYSGSCPMAVTPT EKGRACVSHQQTPSQVKLGTSYRTPKSVRRGPPPVDDGRILGTPDYLAPELLLGAAHGPAVDWW ALGVCLFEFLTGIPPFNDETPQQVFQNILKRDIPWPEGEEKLSDKSQSAMDMLLTIDDTKRAGM KELKHHPLFSEVDWENLQHQTMPFVPQPDNETDTSYFEARNNAQHLTISGFSL hide sequence

Ensembl Acc Id:

ENSRNOP00000074792 ⟸ ENSRNOT00000077899

Ensembl Acc Id:

ENSRNOP00000085820 ⟸ ENSRNOT00000106298

RefSeq Acc Id:	XP_063132572 ⟸ XM_063276502
- Peptide Label:	isoform X3
- UniProtKB:	D4A355 (UniProtKB/TrEMBL)

Protein Domains

AGC-kinase C-terminal Protein kinase

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-D4A355-F1-model_v2	AlphaFold	D4A355	1-866	view protein structure

Transcriptome

eQTL		View at Phenogen
WGCNA		View at Phenogen
Tissue/Strain Expression		View at Phenogen

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	RGD:1309186	AgrOrtholog
BioCyc Gene	G2FUF-8478	BioCyc
Ensembl Genes	ENSRNOG00000054474	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSRNOT00000077899	ENTREZGENE
	ENSRNOT00000077899.2	UniProtKB/TrEMBL
	ENSRNOT00000106298	ENTREZGENE
	ENSRNOT00000106298.1	UniProtKB/TrEMBL
Gene3D-CATH	Phosphorylase Kinase, domain 1	UniProtKB/TrEMBL
	Transferase(Phosphotransferase) domain 1	UniProtKB/TrEMBL
InterPro	AGC-kinase_C	UniProtKB/TrEMBL
	Kinase-like_dom_sf	UniProtKB/TrEMBL
	Prot_kinase_dom	UniProtKB/TrEMBL
	Ser/Thr_kinase_AS	UniProtKB/TrEMBL
	Ser_Thr_kinase_AGC	UniProtKB/TrEMBL
KEGG Report	rno:307169	UniProtKB/TrEMBL
NCBI Gene	307169	ENTREZGENE
PANTHER	SERINE/THREONINE-PROTEIN KINASE	UniProtKB/TrEMBL
	SERINE/THREONINE-PROTEIN KINASE GREATWALL	UniProtKB/TrEMBL
Pfam	Pkinase	UniProtKB/TrEMBL
PhenoGen	Mastl	PhenoGen
PROSITE	AGC_KINASE_CTER	UniProtKB/TrEMBL
	PROTEIN_KINASE_DOM	UniProtKB/TrEMBL
	PROTEIN_KINASE_ST	UniProtKB/TrEMBL
RatGTEx	ENSRNOG00000054474	RatGTEx
SMART	S_TKc	UniProtKB/TrEMBL
Superfamily-SCOP	SSF56112	UniProtKB/TrEMBL
UniProt	A0A8I6A106_RAT	UniProtKB/TrEMBL
	A6KRZ2	ENTREZGENE, UniProtKB/TrEMBL
	D4A355	ENTREZGENE, UniProtKB/TrEMBL

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2021-03-09	Mastl	microtubule associated serine/threonine kinase-like	LOC102553656	serine/threonine-protein kinase greatwall-like	Data merged from RGD:7648050	737654	PROVISIONAL
2013-12-18	LOC102553656	serine/threonine-protein kinase greatwall-like			Symbol and Name status set to provisional	70820	PROVISIONAL
2008-04-30	Mastl	microtubule associated serine/threonine kinase-like	Mastl_predicted	microtubule associated serine/threonine kinase-like (predicted)	'predicted' is removed	2292626	APPROVED
2005-01-12	Mastl_predicted	microtubule associated serine/threonine kinase-like (predicted)			Symbol and Name status set to approved	70820	APPROVED

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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Imported Disease Annotations - ClinVar