Submit Data |  Help |  Video Tutorials |  News |  Publications |  FTP Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes QTLs Strains Markers Genome Information Ontologies Cell Lines References FTP Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Variant Visualizer Multi-Ontology Enrichment (MOET) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) RatMine GViewer (Genome Viewer) Overgo Probe Designer ACP Haplotyper Genome Scanner
Aging & Age-Related Disease Cancer Cardiovascular Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Genetic Models PhenoMiner (Quantitative Phenotypes) Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Phenotypes GERRC (Gene Editing Rat Resource Center) Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Poster Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
Gene: Cct2 (chaperonin containing TCP1 subunit 2) Rattus norvegicus
Analyze
Symbol: Cct2
Name: chaperonin containing TCP1 subunit 2
Description: Predicted to have protein folding chaperone and ubiquitin protein ligase binding activity. Predicted to be involved in several processes, including binding activity of sperm to zona pellucida; chaperone mediated protein folding independent of cofactor; and positive regulation of DNA biosynthetic process. Predicted to localize to several cellular components, including the chaperonin-containing T-complex; microtubule; and zona pellucida receptor complex. Orthologous to human CCT2 (chaperonin containing TCP1 subunit 2); INTERACTS WITH (S)-10-[(DIMETHYLAMINO)METHYL]-4-ETHYL-4,9-DIHYDROXY-1H-PYRANO[3',4':6,7]INOLIZINO[1,2-B]-QUINOLINE-3,14(4H,12H)-DIONE; 1,1,1-Trichloro-2-(o-chlorophenyl)-2-(p-chlorophenyl)ethane; 17alpha-ethynylestradiol.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: CCT-beta; chaperonin containing TCP1, subunit 2 (beta); MGC94480; T-complex protein 1 subunit beta; TCP-1-beta
Orthologs:
Homo sapiens (human) : CCT2 (chaperonin containing TCP1 subunit 2)  HGNC  Alliance
Mus musculus (house mouse) : Cct2 (chaperonin containing Tcp1, subunit 2 (beta))  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Cct2 (chaperonin containing TCP1 subunit 2)
Pan paniscus (bonobo/pygmy chimpanzee) : CCT2 (chaperonin containing TCP1 subunit 2)
Canis lupus familiaris (dog) : CCT2 (chaperonin containing TCP1 subunit 2)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Cct2 (chaperonin containing TCP1 subunit 2)
Sus scrofa (pig) : CCT2 (chaperonin containing TCP1 subunit 2)
more info ...
Related Pseudogenes: Cct2-ps1  
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0760,106,532 - 60,122,779 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.0760,106,598 - 60,122,867 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4756,391,341 - 56,404,084 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.1756,412,071 - 56,424,814 (-)NCBI
Celera749,468,323 - 49,481,066 (-)NCBICelera
Cytogenetic Map7q22NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model

Annotation    (Toggle Annotation Detail/Summary View)

Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated
RGD Disease Portals

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 5.0)
Damaging Variants

Additional Information

External Database Links
Nomenclature History
  
More on Cct2
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1359143
Created: 2005-07-29
Species: Rattus norvegicus
Last Modified: 2019-05-07
Status: ACTIVE



Contact Us |  About Us |  License CC BY 4.0 |  Legal Disclaimer |  © Medical College of Wisconsin
NHLBI Logo

RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.