Foco14 QTL Report (Rattus norvegicus) - Rat Genome Database

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QTL Registration

QTL: Foco14 (Food consumption QTL 14) Rattus norvegicus

Symbol: Foco14
Name: Food consumption QTL 14
RGD ID: 7411605
Trait: eating behavior trait   (VT:0001431)    
Measurement Type: feed conversion ratio   (CMO:0001312)    
LOD Score: 24.1
P Value: 0.001
Variance: 22.4
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
GRCr8736,178,764 - 81,178,764RGD_MAPPER_PIPELINE
mRatBN7.2734,293,282 - 79,293,282RGD_MAPPER_PIPELINEmRatBN7.2
Rnor_6.0740,872,682 - 85,872,682RGD_MAPPER_PIPELINERnor6.0
Rnor_5.0741,096,572 - 86,096,572RGD_MAPPER_PIPELINERnor5.0
RGSC_v3.4738,076,588 - 83,076,588RGD_MAPPER_PIPELINERGSC3.4
Cross Type: intercross
Strains Crossed: F344/IcoCrlf LOU/NimrOlaHsd 
JBrowse: View Region in Genome Browser (JBrowse)
Model



Disease Annotations     Click to see Annotation Detail View
Body Weight  (IAGP)

Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype
Experimental Data Annotations     Click to see Annotation Detail View

Clinical Measurement

Experimental Condition

Measurement Method

Vertebrate Trait

Rat Strain

References

References - curated
# Reference Title Reference Citation
1. QTLs influencing carbohydrate and fat choice in a LOU/CxFischer 344 F2 rat population. Marissal-Arvy N, etal., Obesity (Silver Spring). 2013 Apr 17. doi: 10.1002/oby.20485.

Region

Genes in Region
The following Genes overlap with this region.    Full Report CSV TAB Printer Analysis Tools
RGD IDSymbolNameChrStartStopSpecies
41291036LOC120093570uncharacterized LOC12009357073618755636211987Rat
402000330LOC134479670uncharacterized LOC13447967073627196136273206Rat
401991981LOC134479671uncharacterized LOC13447967173635414736363518Rat
1565753Csl1citrate synthase like 173647055736590936Rat
41212204Cs-ps1citrate synthase, pseudogene 173648672736488547Rat
6498798LOC100910453voltage-dependent anion-selective channel protein 1-like73672760236728205Rat
3086KitlgKIT ligand73678262136863796Rat
402079287LOC134479672uncharacterized LOC13447967273686727236870884Rat
41175762LOC120093572uncharacterized LOC12009357273686943036874480Rat
11378564LOC108351620glyceraldehyde-3-phosphate dehydrogenase pseudogene73691694436918911Rat
41395832LOC120093971small nucleolar RNA SNORA4873698886736989008Rat
1306351Tmtc3transmembrane O-mannosyltransferase targeting cadherins 373715145637196550Rat
1311640Cep290centrosomal protein 29073719676537285955Rat
41325648Trnap-ggg7transfer RNA proline (anticodon GGG) 773723575137235831Rat
1307947Rlig1RNA 5'-phosphate and 3'-OH ligase 173728454537295858Rat
1563125C7h12orf50similar to human chromosome 12 open reading frame 5073729624237329893Rat
402188664LOC134479675uncharacterized LOC13447967573729683237298132Rat
2323562Rps13-ps9ribosomal protein S13, pseudogene 973736703937367481Rat
41251481LOC120093573uncharacterized LOC12009357373843964338457720Rat
1307871Mgat4cMGAT4 family, member C73859611739361103Rat
40962455Rsrc1-ps1arginine and serine rich coiled-coil 1, pseudogene 173895126638964246Rat
402453941LOC134479677uncharacterized LOC13447967773908514939104733Rat
402264647LOC134479676uncharacterized LOC13447967673912419839146884Rat
6498316LOC100910482uncharacterized LOC10091048273940734839428611Rat
621612Ntsneurotensin73945148439460888Rat
402425367LOC134479678uncharacterized LOC13447967873948100239485530Rat
621329Rassf9Ras association domain family member 973948625739518090Rat
9445936LOC103690238uncharacterized LOC10369023873971638139763188Rat
41365425LOC120093575uncharacterized LOC12009357574000060440018296Rat
2273Alx1ALX homeobox 174004418540063778Rat
41273020LOC120093145leucine-rich repeat and IQ domain-containing protein 1-like74007815040203750Rat
41128408LOC120094005small nucleolar RNA SNORA1774016873240168851Rat
1564903Lrriq1leucine-rich repeats and IQ motif containing 174021103640296374Rat
402384742LOC134479679uncharacterized LOC13447967974029644240335547Rat
628664Slc6a15solute carrier family 6 member 1574043960740493788Rat
41078854LOC120093967small nucleolar RNA SNORA4874045067740450820Rat
41254759LOC120093576uncharacterized LOC12009357674045301440455038Rat
41327720LOC120093901U6 spliceosomal RNA74054379740543901Rat
41028082LOC120093907U6 spliceosomal RNA74097887840978986Rat
41337737LOC120093577uncharacterized LOC12009357774132304441413605Rat
402101547LOC134479796MLV-related proviral Env polyprotein-like74148043741496098Rat
41032554Banf1-ps4BAF nuclear assembly factor 1, pseudogene 474216400542164450Rat
41082719LOC120094000small nucleolar RNA SNORA1774223110342231235Rat
1309848Tmtc2transmembrane O-mannosyltransferase targeting cadherins 274228074642695651Rat
40960293LOC120093898U6 spliceosomal RNA74245522542455323Rat
402301293LOC134479680uncharacterized LOC13447968074252485742534354Rat
40957379LOC120093578uncharacterized LOC12009357874265895042683552Rat
402068521LOC134479681uncharacterized LOC13447968174272989942751849Rat
1310270Mettl25methyltransferase like 2574294893443029610Rat
1311912Ccdc59coiled-coil domain containing 5974302927243035655Rat
402238971LOC134479682uncharacterized LOC13447968274365219443652913Rat
1305021Ppfia2PTPRF interacting protein alpha 274365225844126555Rat
1307051Acss3acyl-CoA synthetase short-chain family member 374412772544336707Rat
9417884LOC103692846sulfotransferase 1C2 pseudogene74414127044142644Rat
40969194LOC120094001small nucleolar RNA SNORA1774434633444346464Rat
402330441LOC134479592uncharacterized LOC13447959274444640844450053Rat
621256Lin7alin-7 homolog A, crumbs cell polarity complex component74447356844629074Rat
41152665LOC120094046U5 spliceosomal RNA74454403344544141Rat
402061666LOC134479683uncharacterized LOC13447968374457916044605028Rat
1308322Myf5myogenic factor 574468940744692638Rat
3134Myf6myogenic factor 674469946944701313Rat
41050361LOC120093580uncharacterized LOC12009358074470171544903039Rat
620779Ptprqprotein tyrosine phosphatase, receptor type, Q74472091644903291Rat
1589018Otoglotogelin-like74495263345097869Rat
620013Ppp1r12aprotein phosphatase 1, regulatory subunit 12A74536892245480158Rat
69065Pawrpro-apoptotic WT1 regulator74553148045611492Rat
41023123Rpl26-ps10ribosomal protein L26, pseudogene 1074559036245603426Rat
41368650LOC120093977small nucleolar RNA SNORA4874559819045598334Rat
41136792LOC120093582uncharacterized LOC12009358274565169445653120Rat
40962771LOC120093799uncharacterized LOC12009379974569453345701523Rat
3803Syt1synaptotagmin 174569964946244460Rat
7658882LOC102547595uncharacterized LOC10254759574583765145887891Rat
9447173Brcc3dcBRCA1/BRCA2-containing complex, subunit 3, domain containing74590132145903078Rat
402141245LOC134479870uncharacterized LOC13447987074590863445925594Rat
402335391LOC134479869high mobility group protein B1-like74596987146007059Rat
6493321Rpl31-ps2ribosomal protein L31, pseudogene 274618653746187065Rat
41207487LOC120093800uncharacterized LOC12009380074624457146250282Rat
1594372Hdac1-ps6Histone deacetylase 1, pseudogene 674652945546531550Rat
1306259Nav3neuron navigator 374693857747726839Rat
41236746LOC120093801uncharacterized LOC12009380174694300046983744Rat
1310258E2f7E2F transcription factor 774803688148079055Rat
402418583LOC134479685uncharacterized LOC13447968574810583648176845Rat
41210402LOC120093928U6 spliceosomal RNA74822128948221394Rat
61950Csrp2cysteine and glycine-rich protein 274823541548254049Rat
1595790Zdhhc17zinc finger DHHC-type palmitoyltransferase 1774825626948320000Rat
41121043LOC120093583uncharacterized LOC12009358374831245448319862Rat
1588873Pes1-ps4pescadillo ribosomal biogenesis factor 1, pseudogene 474836189148363981Rat
41017733LOC120093585uncharacterized LOC12009358574843188348454976Rat
402225936LOC134479684uncharacterized LOC13447968474844422248448165Rat
41054798LOC120093925U6 spliceosomal RNA74844507348445172Rat
2319089Spdl1-ps1spindle apparatus coiled-coil protein 1, pseudogene 174847193348476544Rat
1561474Osbpl8oxysterol binding protein-like 874848325948636151Rat
41366535LOC120093586uncharacterized LOC12009358674856152348564409Rat
402138486LOC134479686uncharacterized LOC13447968674860911948611088Rat
1596694Eif5-ps8eukaryotic translation initiation factor 5, pseudogene 874860914548610939Rat
1560748Bbs10Bardet-Biedl syndrome 1074863732448640395Rat
7721657LOC102548498uncharacterized LOC10254849874877002048794299Rat
402335278LOC134479687uncharacterized LOC13447968774879426648800142Rat
71094Nap1l1nucleosome assembly protein 1-like 174881946448844108Rat
41211178LOC120093965small nucleolar RNA SNORA4874882692148827063Rat
3836Phlda1pleckstrin homology-like domain, family A, member 174885369048855894Rat
7728983LOC102548561uncharacterized LOC10254856174909469049106480Rat
402360158LOC134479593uncharacterized LOC13447959374918576249186501Rat
11427685LOC108351449uncharacterized LOC10835144974921218449230900Rat
41375281LOC120093587uncharacterized LOC12009358774923089949249420Rat
11431842LOC108351450uncharacterized LOC10835145074933147049350730Rat
1306183Krr1KRR1, small subunit processome component homolog74936179449374222Rat
1305978Glipr1GLI pathogenesis-related 174937357949399190Rat
1310205Glipr1l2GLIPR1 like 274940184749432249Rat
1563000Glipr1l1GLIPR1 like 174943686749463860Rat
1309826Caps2calcyphosine 274946732049525465Rat
2318888Rpl27a-ps2ribosomal protein L27a, pseudogene 274952908849561365Rat
628829Kcnc2potassium voltage-gated channel subfamily C member 274958627449770212Rat
402253034LOC134479688uncharacterized LOC13447968874978578149789112Rat
41098017LOC120093919U6 spliceosomal RNA75006389550063989Rat
2301984Atxn7l3bataxin 7-like 3B75020866650212190Rat
402365052LOC134479689uncharacterized LOC13447968975021599250269958Rat
402182923LOC134479690uncharacterized LOC13447969075028961950292239Rat
7709076LOC102546573uncharacterized LOC10254657375029647150303572Rat
6486766Tuba1b-ps5tubulin, alpha 1B, pseudogene 575045065750452094Rat
402185158LOC134479594uncharacterized LOC13447959475059474350600917Rat
41084667Snord56small nucleolar RNA, C/D box 5675060829550608348Rat
11414169LOC108351454uncharacterized LOC10835145475130536551320697Rat
1585306Arf1-ps4ADP-ribosylation factor 1, pseudogene 475161462951615173Rat
728895Trhdethyrotropin-releasing hormone degrading enzyme75182947352236843Rat
41180745LOC120093589uncharacterized LOC12009358975223670652254687Rat
41120670Trnat-agu25transfer RNA threonine (anticodon AGU) 2575224954752249625Rat
7514887LOC102549403uncharacterized LOC10254940375228671052309724Rat
41208259LOC120093590uncharacterized LOC12009359075231352752333760Rat
1595789Btf3-ps10basic transcription factor 3, pseudogene 1075243068552431150Rat
631332Tph2tryptophan hydroxylase 275257190952676305Rat
9406127LOC103692856nuclear cap-binding protein subunit 2 pseudogene75262656852633674Rat
1307920Tbc1d15TBC1 domain family, member 1575269077052746309Rat
1303150Rab21RAB21, member RAS oncogene family75279015852814943Rat
402262921LOC134479691uncharacterized LOC13447969175280184752805917Rat
735209Tmem19transmembrane protein 1975284498552871708Rat
1593643Thap2THAP domain containing 275287901152893680Rat
1306287Zfc3h1zinc finger, C3H1-type containing75289441752950755Rat
41089710LOC120093959small nucleolar RNA SNORA4475290520552905327Rat
11410267Hnrnpa1-ps42heterogeneous nuclear ribonucleoprotein A1, pseudogene 4275293189552933744Rat
41346314LOC120093850MICOS complex subunit Mic10-like75295660952965697Rat
1307733Lgr5leucine rich repeat containing G protein coupled receptor 575297315153107964Rat
41214652Trnap-agg57transfer RNA proline (anticodon AGG) 5775298908152989154Rat
41084931LOC12009359139S ribosomal protein L50, mitochondrial-like75307050253100143Rat
402200739LOC134479797large ribosomal subunit protein eL19-like75324020053247772Rat
402015287LOC134479871uncharacterized LOC13447987175328670353290616Rat
621783Tspan8tetraspanin 875333101953365402Rat
402186794LOC134479873uncharacterized LOC13447987375335415453365121Rat
41113964LOC120093938U7 small nuclear RNA75336032753360384Rat
7677619LOC102551386uncharacterized LOC10255138675337606953382441Rat
402307506LOC134479872uncharacterized LOC13447987275338612753400465Rat
7638646LOC102551482uncharacterized LOC10255148275339494753404825Rat
41120201LOC120093592uncharacterized LOC12009359275341516853427119Rat
620780Ptprrprotein tyrosine phosphatase, receptor type, R75354861153815632Rat
1596425Taf7l-ps1TAF7-like RNA polymerase II, TATA box binding protein (TBP)-associated factor, pseudogene 175364930153650443Rat
41355956LOC120093594uncharacterized LOC12009359475374372753767437Rat
41067918LOC120093595uncharacterized LOC12009359575379000953805803Rat
1305922Ptprbprotein tyrosine phosphatase, receptor type, B75381619753920760Rat
620728Kcnmb4potassium calcium-activated channel subfamily M regulatory beta subunit 475395215054005101Rat
1311672Cnot2CCR4-NOT transcription complex, subunit 275401644754117511Rat
2318367Pdia4-ps1protein disulfide isomerase family A, member 4, pseudogene 175412701754128266Rat
40972102LOC120093596uncharacterized LOC12009359675420381454209003Rat
1564883Rpl12a-ps1ribosomal protein L12, pseudogene 175425270254253424Rat
1562127Myrflmyelin regulatory factor-like75428943054406097Rat
1582946H3f3a-ps5H3.3 histone A, pseudogene 575440921654416694Rat
620650Rab3ipRAB3A interacting protein75441741854461253Rat
1305439Best3bestrophin 375447193854548885Rat
402276005LOC134479874uncharacterized LOC13447987475450138854506053Rat
41120395LOC120093598uncharacterized LOC12009359875452245354526143Rat
1597472Rtcb-ps1RNA 2',3'-cyclic phosphate and 5'-OH ligase, pseudogene 175455581954557905Rat
41354498LOC120093599uncharacterized LOC12009359975456292054571041Rat
1307358Lrrc10leucine-rich repeat-containing 1075457293554574332Rat
1359143Cct2chaperonin containing TCP1 subunit 275457865454591428Rat
1308201Frs2fibroblast growth factor receptor substrate 275459718254678656Rat
41286435LOC120093600uncharacterized LOC12009360075467875354690614Rat
1597418Mrpl47-ps1mitochondrial ribosomal protein L47, pseudogene 175472581054727451Rat
1305741Yeats4YEATS domain containing 475474422054751361Rat
1306474RGD1306474similar to RIKEN cDNA 9530003J2375476106354772664Rat
1593616Lyc2lysozyme C type 275477300954780352Rat
3026Lyz2lysozyme 275479271554798060Rat
1304640Cpsf6cleavage and polyadenylation specific factor 675479845254887711Rat
41016237LOC120093975small nucleolar RNA SNORA4875481603854816179Rat
41127999LOC120093601uncharacterized LOC12009360175491692254930213Rat
402401171LOC134479595uncharacterized LOC13447959575499155654993151Rat
41061317LOC120093899U6 spliceosomal RNA75500715155007254Rat
402237798LOC134479692uncharacterized LOC13447969275503127455039832Rat
41163580LOC120093602uncharacterized LOC12009360275503979555041489Rat
7710554LOC102550217uncharacterized LOC10255021775504727155058378Rat
402044785LOC134479693uncharacterized LOC13447969375507656555077444Rat
1310532Cpmcarboxypeptidase M75511159955172114Rat
41397689LOC120093603uncharacterized LOC12009360375511199255121537Rat
1305332Mdm2MDM2 proto-oncogene75517655855201757Rat
11428166LOC108351461uncharacterized LOC10835146175521821455227887Rat
1564876Slc35e3solute carrier family 35, member E375522296255236022Rat
621160Nup107nucleoporin 10775523961055285050Rat
620577Rap1bRAP1B, member of RAS oncogene family75530892255342217Rat
7733495Ndufa13-ps3NADH:ubiquinone oxidoreductase subunit A13, pseudogene 375532680055327253Rat
41116110Sfr1-ps1SWI5-dependent homologous recombination repair protein 1, pseudogene 175534397455347284Rat
41166350LOC120093606uncharacterized LOC12009360675535457455360381Rat
402095327LOC134479875uncharacterized LOC13447987575536449855365399Rat
41103456LOC120093607uncharacterized LOC12009360775537426455381194Rat
402048380LOC134479876uncharacterized LOC13447987675538252755385767Rat
7725676LOC102550659uncharacterized LOC10255065975540265255411370Rat
41135449LOC120093865basic proline-rich protein-like75543059555432166Rat
1306282Tmem186l1transmembrane protein 186l175543920455441385Rat
11389551LOC108351462uncharacterized LOC10835146275550551555515429Rat
402128478LOC134479694uncharacterized LOC13447969475553725455539425Rat
11429701LOC108351463uncharacterized LOC10835146375556556955580976Rat
402270638LOC134479695uncharacterized LOC13447969575558296555588586Rat
7718419LOC102551023uncharacterized LOC10255102375560381155615916Rat
1561092Mdm1Mdm1 nuclear protein75561545955651889Rat
1561292Il22interleukin 2275568706155691526Rat
9117410LOC103692876small ubiquitin-related modifier 2 pseudogene75576060755760997Rat
2866Ifnginterferon gamma75578918055793216Rat
402116228LOC134479596uncharacterized LOC13447959675581590255819016Rat
41268730LOC120093851uncharacterized LOC12009385175609595956098586Rat
1312039Dyrk2dual specificity tyrosine phosphorylation regulated kinase 275623527656265741Rat
402184072LOC134479696uncharacterized LOC13447969675644082556442214Rat
620479Cand1cullin-associated and neddylation-dissociated 175656676556604653Rat
402264546LOC134479697uncharacterized LOC13447969775664300256648500Rat
1594497Rps12-ps4ribosomal protein S12, pseudogene75671316556713557Rat
2324060Uqcr11l1ubiquinol-cytochrome c reductase, complex III subunit XI like 175676078256760952Rat
41394217LOC120093612uncharacterized LOC12009361275677390756788442Rat
621667Grip1glutamate receptor interacting protein 175682050157477877Rat
402428663LOC134479880uncharacterized LOC13447988075686288556863625Rat
401988105LOC134479879uncharacterized LOC13447987975686318356927368Rat
402215694LOC134479878uncharacterized LOC13447987875710325357135426Rat
402212491LOC134479877uncharacterized LOC13447987775722462857231519Rat
41052312LOC120093802uncharacterized LOC12009380275724055557245262Rat
1560103HelbDNA helicase B75747411557502221Rat
1308846Irak3interleukin-1 receptor-associated kinase 375753852257600166Rat
735173Tmbim4transmembrane BAX inhibitor motif containing 475760427557618861Rat
1308261LlphLLP homolog, long-term synaptic facilitation factor75762092557625924Rat
620617Hmga2high mobility group AT-hook 275776271057884555Rat
41181996LOC120093613uncharacterized LOC12009361375779871857827513Rat
7677968LOC102549309uncharacterized LOC10254930975784969057863070Rat
41260607LOC120093614uncharacterized LOC12009361475786493957873970Rat
7678454LOC102547249uncharacterized LOC10254724975788464157895863Rat
11502995LOC108351467uncharacterized LOC10835146775796638357976697Rat
41374847LOC120093989small nucleolar RNA SNORA1775800478958004909Rat
7542471LOC102547506uncharacterized LOC10254750675800691158026270Rat
41319368LOC120093615uncharacterized LOC12009361575805292158057985Rat
41150806LOC120093616uncharacterized LOC12009361675806408558080327Rat
402251474LOC134479699uncharacterized LOC13447969975808316058090624Rat
402082511LOC134479698uncharacterized LOC13447969875809064758093872Rat
402155474LOC134479700uncharacterized LOC13447970075813865558147006Rat
1596851Msrb3methionine sulfoxide reductase B375818882758311459Rat
1562607Styx-ps1serine/threonine/tyrosine interacting protein, pseudogene 175824890858250111Rat
1596822Lemd3LEM domain containing 375830055658389485Rat
41235016LOC120093617uncharacterized LOC12009361775839923758413008Rat
619774Wif1Wnt inhibitory factor 175843332658503853Rat
402009346LOC134479701uncharacterized LOC13447970175844918958460461Rat
402003583LOC134479597uncharacterized LOC13447959775855599158567009Rat
1561871Rps10-ps22ribosomal protein S10, pseudogene 2275865813158659366Rat
1305255Tbc1d30TBC1 domain family, member 3075866505458754427Rat
40974068LOC120093619uncharacterized LOC12009361975875526258757349Rat
1305877Gnsglucosamine (N-acetyl)-6-sulfatase75877462558808650Rat
1311450Rassf3Ras association domain family member 375882136058886020Rat
402097759LOC134479702uncharacterized LOC13447970275889834858911330Rat
1588588Tbk1TANK-binding kinase 175896331958996357Rat
402157019LOC134479881uncharacterized LOC13447988175899640159021612Rat
1305562Xpotexportin for tRNA75899702559037506Rat
2322266Ghitm-ps2growth hormone inducible transmembrane protein, pseudogene 275904170859043023Rat
1561648C7h12orf56similar to human chromosome 12 open reading frame 5675905528359106900Rat
1565498Kics2KICSTOR subunit 275916970359182974Rat
1566260Srgap1SLIT-ROBO Rho GTPase activating protein 175921500759479600Rat
40973776LOC120093620uncharacterized LOC12009362075921898659233832Rat
40943516LOC120093867sentrin-specific protease 2-like75949212459494655Rat
402130018LOC134479798sentrin-specific protease 2-like75951626859517673Rat
41349511LOC120093868sentrin-specific protease 2-like75955803759560113Rat
41179485LOC120093869sentrin-specific protease 2-like75958692559588405Rat
41225140LOC120093621sentrin-specific protease 2-like75962745759629527Rat
7548711Tmed2-ps1transmembrane p24 trafficking protein 2, pseudogene 175965312059656281Rat
1309356Rxylt1ribitol xylosyltransferase 175965627459668140Rat
1594496Vps54-ps1vacuolar protein sorting 54 homolog (S. cerevisiae), pseudogene 175971766359720016Rat
2185Avpr1aarginine vasopressin receptor 1A75999974360003667Rat
402033072LOC134479598uncharacterized LOC13447959876012003760127982Rat
1309528Ppm1hprotein phosphatase, Mg2+/Mn2+ dependent, 1H76022408760484947Rat
402283637LOC134479882uncharacterized LOC13447988276034912560355738Rat
402261207LOC134479883uncharacterized LOC13447988376042398060429075Rat
402274279LOC134479799nascent polypeptide-associated complex subunit alpha, muscle-specific form-like76052776060538009Rat
2325604Mirlet7imicroRNA let-7i76052787760527961Rat
1308808Mon2MON2 homolog, regulator of endosome-to-Golgi trafficking76053477260613467Rat
11466148Snurfl1SNRPN upstream open reading frame like 176060010160600962Rat
402025953LOC134478823SNRPN upstream reading frame protein-like76060110260601991Rat
628795Usp15ubiquitin specific peptidase 1576064361160805137Rat
9685075Snora19small nucleolar RNA, H/ACA box 1976066589160665959Rat
402094298LOC134479704uncharacterized LOC13447970476068397160690415Rat
402324556LOC134479703uncharacterized LOC13447970376073402160753461Rat
402228257LOC134479705uncharacterized LOC13447970576080760860817429Rat
1589429Tafa2TAFA chemokine like family member 276082798561303873Rat
40952871LOC120093870basic proline-rich protein-like76132743261328649Rat
41098039LOC120093624uncharacterized LOC12009362476141317061417322Rat
41286787Crb1-ps3crumbs cell polarity complex component 1, pseudogene 376146880161483906Rat
41375035LOC120093987small nucleolar RNA SNORA1776156418861564319Rat
40939206Ftl1-ps8ferritin light chain 1, pseudogene 876271085962723054Rat
402110653LOC134479706uncharacterized LOC13447970676283435262861719Rat
7695057LOC102552186uncharacterized LOC10255218676286133262977982Rat
3691Slc16a7solute carrier family 16 member 776292906763096995Rat
7654942LOC102552637uncharacterized LOC10255263776329410863382203Rat
7628604LOC102552423uncharacterized LOC10255242376338220363418062Rat
1561255Lrig3leucine-rich repeats and immunoglobulin-like domains 376370172463751898Rat
40991943LOC120093626uncharacterized LOC12009362676381992363826670Rat
402057115LOC134479599uncharacterized LOC13447959976434288064346192Rat
1559995Dppa5l1developmental pluripotency associated 5 like 176441041964411004Rat
402129054LOC134479884uncharacterized LOC13447988476443420964448097Rat
41034435Trnat-agu22transfer RNA threonine (anticodon AGU) 2276445087764450949Rat
41075389LOC120093627uncharacterized LOC12009362776450654464522484Rat
40988719LOC120093981small nucleolar RNA SNORA1776456777864567908Rat
11399049LOC108351471uncharacterized LOC10835147176456857064586337Rat
1597486Park7-ps1Parkinsonism associated deglycase, pseudogene 176459146564592345Rat
7525893LOC102557532uncharacterized LOC10255753276459429364596191Rat
1588587Atp23ATP23 metallopeptidase and ATP synthase assembly factor homolog76460010064615240Rat
41359680LOC120093628uncharacterized LOC12009362876463969664645590Rat
11399716LOC108351472uncharacterized LOC10835147276467045864690252Rat
2319209Ctdsp2CTD small phosphatase 276469073764710639Rat
620301Aviladvillin76471129464729436Rat
1593058TsfmTs translation elongation factor, mitochondrial76471433064750106Rat
1590711Eef1akmt3EEF1A lysine methyltransferase 376473872664749904Rat
1593036Mettl1methyltransferase 1, tRNA methylguanosine76475018964754531Rat
69192Cyp27b1cytochrome P450, family 27, subfamily b, polypeptide 176475662664761570Rat
1590688Marchf9membrane associated ring-CH-type finger 976476434664767824Rat
621120Cdk4cyclin-dependent kinase 476477145364774891Rat
1309876Tspan31tetraspanin 3176477488164783534Rat
628844Agap2ArfGAP with GTPase domain, ankyrin repeat and PH domain 276478261864799624Rat
1359574Os9OS9, endoplasmic reticulum lectin76480251764829185Rat
402150615LOC134479707uncharacterized LOC13447970776483816264842940Rat
2318153Coq4-ps1coenzyme Q4, pseudogene 176484437464848759Rat
1565117Rps26l1ribosomal protein S26 like 176486713164868017Rat
620490B4galnt1beta-1,4-N-acetyl-galactosaminyl transferase 176487390964881512Rat
1564851Slc26a10solute carrier family 26, member 1076488069464890340Rat
735210Arhgef25Rho guanine nucleotide exchange factor 2576489126064898382Rat
1566181Dtx3deltex E3 ubiquitin ligase 376489869364904636Rat
402177496LOC134479708uncharacterized LOC13447970876489989764900976Rat
621711Pip4k2cphosphatidylinositol-5-phosphate 4-kinase type 2 gamma76490532264920380Rat
1303035Kif5akinesin family member 5A76493721064974339Rat
1303182Dctn2dynactin subunit 276497733864992875Rat
1311050Mbd6methyl-CpG binding domain protein 676499287765001274Rat
62391Ddit3DNA-damage inducible transcript 376500169565006517Rat
402273966LOC134479709DDIT3 upstream open reading frame protein76500173065005659Rat
1305321Mars1methionyl-tRNA synthetase 176500645665023880Rat
11465430Gapdh-ps23Glyceraldehyde-3-phosphate dehydrogenase, pseudogene 2376502385365034702Rat
1305342Arhgap9Rho GTPase activating protein 976503402365042336Rat
621673Gli1GLI family zinc finger 176504223765054888Rat
621196Inhbeinhibin subunit beta E76506153165064519Rat
621194Inhbcinhibin subunit beta C76506945065082919Rat
41303428LOC120093804uncharacterized LOC12009380476507678865084660Rat
1310066R3hdm2R3H domain containing 276509768565225863Rat
7520545Eef1a1-ps12eukaryotic translation elongation factor 1 alpha 1, pseudogene 1276511276265113400Rat
41067915LOC120093917U6 spliceosomal RNA76512179765121906Rat
402117001LOC134479885peptidyl-prolyl cis-trans isomerase D-like76515154665173326Rat
1308964Stac3SH3 and cysteine rich domain 376522715165235884Rat
2324558Ndufa4l2NDUFA4, mitochondrial complex associated like 276524216965244296Rat
1308582Shmt2serine hydroxymethyltransferase 276524424765249580Rat
628723Nxph4neurexophilin 476525304365261864Rat
1307535Lrp1LDL receptor related protein 176526563965346196Rat
41348715LOC120093805uncharacterized LOC12009380576533069065338648Rat
402244174LOC134479886uncharacterized LOC13447988676535111065360523Rat
402215721LOC134479889uncharacterized LOC13447988976536152265365359Rat
1309063Stat6signal transducer and activator of transcription 676536550565382825Rat
1311712Nab2Ngfi-A binding protein 276538286365389527Rat
402407532LOC134479888uncharacterized LOC13447988876539420165399404Rat
1587179Nemp1nuclear envelope integral membrane protein 176539929765424054Rat
3135Myo1amyosin IA76542420665443227Rat
3809Tac3tachykinin precursor 376544781765454427Rat
1306532Zbtb39zinc finger and BTB domain containing 3976546225565469806Rat
61903Gpr182G protein-coupled receptor 18276547125465474110Rat
41090800LOC120093075retinol dehydrogenase 16-like76547629465498680Rat
735050Rdh16retinol dehydrogenase 1676549976365510304Rat
41109545Rdh16-ps1retinol dehydrogenase 16, pseudogene 176551393565537027Rat
402329441LOC134479887uncharacterized LOC13447988776551415265519021Rat
1561812Rdh9retinol dehydrogenase 976552755265530396Rat
631370Rdh7retinol dehydrogenase 776556125965574618Rat
628716Sdr9c7short chain dehydrogenase/reductase family 9C, member 776558872665607534Rat
402236101LOC134479600high mobility group protein B1-like76565505265657548Rat
1311971Uqcrbubiquinol-cytochrome c reductase binding protein76570001665705382Rat
7570063LOC102549197uncharacterized LOC10254919776570556265711270Rat
735158Mterf3mitochondrial transcription termination factor 376571165465729926Rat
40928360LOC1200938965S ribosomal RNA76572574365725858Rat
1308949Ptdss1phosphatidylserine synthase 176573025065792024Rat
1583275Esco2-ps1establishment of cohesion 1 homolog 2 (S. cerevisiae), pseudogene 176583341665836864Rat
1583261Limk2-ps1LIM domain kinase 2, pseudogene 176593132565932422Rat
402054988LOC134479601uncharacterized LOC13447960176594022165942563Rat
3649Sdc2syndecan 276601240566125101Rat
628610Cpqcarboxypeptidase Q76614897366719189Rat
9336170LOC103692875translationally-controlled tumor protein pseudogene76625009666258604Rat
41192745LOC120094055U6 spliceosomal RNA76633015066330256Rat
1311262Tspyl5TSPY-like 576676669566770702Rat
1583210Spata1-ps1spermatogenesis associated 1, pseudogene 176687052566874778Rat
1597752Tpt1-ps9tumor protein, translationally-controlled 1 pseudogene 976700709267007755Rat
1562404Rps18l3ribosomal protein S18 like 376702833967028875Rat
41182883LOC120093916U6 spliceosomal RNA76705521967055324Rat
1591678Rps17-ps10ribosomal protein S17, pseudogene 1076712466567125073Rat
1591667Gltp-ps1glycolipid transfer protein, pseudogene 176712678767130048Rat
402234761LOC134479891uncharacterized LOC13447989176718408667192514Rat
620992Mtdhmetadherin76719259267250819Rat
402405648LOC134479890uncharacterized LOC13447989076725382467257941Rat
41364015LOC120093852uncharacterized LOC12009385276730650567308660Rat
1311853Laptm4blysosomal protein transmembrane 4 beta76731943867362547Rat
1305353Matn2matrilin 276738014067529767Rat
41226631LOC120093957small nucleolar RNA SNORA2876753253267532655Rat
621201Rpl30ribosomal protein L3076753342067536555Rat
41001841LOC120093944small nucleolar RNA SNORA7276753391267534043Rat
1590540Erich5glutamate-rich 576753815467569433Rat
70940Ridareactive intermediate imine deaminase A homolog76757658667590493Rat
1308609Pop1POP1 homolog, ribonuclease P/MRP subunit76759050267618187Rat
40964218LOC120093927U6 spliceosomal RNA76761881567618924Rat
1564315Nipal2NIPA-like domain containing 276765962867771105Rat
41236297LOC120093631uncharacterized LOC12009363176766860167745583Rat
41171344LOC120093976small nucleolar RNA SNORA4876776650967766647Rat
402436170LOC134479710uncharacterized LOC13447971076780444367808759Rat
402448986LOC134479602uncharacterized LOC13447960276786229167862963Rat
7673256LOC102553465uncharacterized LOC10255346576788197767890394Rat
621525Kcns2potassium voltage-gated channel, modifier subfamily S, member 276790749267913562Rat
68412Stk3serine/threonine kinase 376793834168208472Rat
1305812Osr2odd-skipped related transcription factor 276837250068380195Rat
2320291Uba52-ps2ubiquitin A-52 residue ribosomal protein fusion product 1, pseudogene 276843325868436115Rat
1311183Vps13bvacuolar protein sorting 13 homolog B76843699669013574Rat
9428725LOC103692884pre-mRNA-splicing factor SPF27 pseudogene76850535468521576Rat
1585800Atmin-ps2ATM interactor, pseudogene 276864698168652267Rat
2325477Mir875microRNA 87576874710668747178Rat
620616Cox6ccytochrome c oxidase subunit 6C76901441069027145Rat
402173987LOC134479800pre-mRNA-splicing factor CWC22 homolog76903773369048214Rat
1565056Rps24-ps17ribosomal protein S24, pseudogene 1776905290469053757Rat
1565493Rgs22regulator of G-protein signaling 2276907368169194041Rat
402400482LOC134479892uncharacterized LOC13447989276920908969212733Rat
1310225Fbxo43F-box protein 4376921829869231873Rat
2319895Polr2kRNA polymerase II, I and III subunit K76924123369244579Rat
1310702Spag1sperm associated antigen 176924630169306483Rat
41261583LOC120094040U4 spliceosomal RNA76929823269298390Rat
1307807Rnf19aring finger protein 19A, RBR E3 ubiquitin protein ligase76931094769350567Rat
7499219Rnf19al1ring finger protein 19A, RBR E3 ubiquitin protein ligase like 176934824669359435Rat
41311683Ldha-ps28lactate dehydrogenase A, pseudogene 2876936293269368199Rat
7630248LOC102554030uncharacterized LOC10255403076938081969408573Rat
402153459LOC134479893uncharacterized LOC13447989376938321769400481Rat
402299307LOC134479894uncharacterized LOC13447989476943933769442281Rat
402458982LOC134479711uncharacterized LOC13447971176947003769504212Rat
402232282LOC134479895uncharacterized LOC13447989576952499469532987Rat
1309382Ankrd46ankyrin repeat domain 4676953230369553311Rat
1309483Snx31sorting nexin 3176956094869662015Rat
619838Pabpc1poly(A) binding protein, cytoplasmic 176966251369674806Rat
402285032LOC134479712uncharacterized LOC13447971276977124769775339Rat
3980Ywhaztyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta76982640469848702Rat
6497839LOC100910524uncharacterized LOC10091052476999125870051724Rat
1563959Zfp706zinc finger protein 70677005096070059588Rat
402107193LOC134479896uncharacterized LOC13447989677009242570100126Rat
40982949Ftl1-ps7ferritin light chain 1, pseudogene 777019216170192818Rat
1561191Grhl2grainyhead-like transcription factor 277028036070415277Rat
1560287Ncaldneurocalcin delta77041768370849763Rat
40939488Nacc1-ps1nucleus accumbens associated 1, pseudogene 177047333270474970Rat
41101397LOC12009387660S ribosomal protein L29-like77053536370535665Rat
40991499LOC120093633uncharacterized LOC12009363377076673470814993Rat
402145218LOC134479713uncharacterized LOC13447971377087264270882078Rat
41182468LOC120093634uncharacterized LOC12009363477088035070919993Rat
1306045Rrm2bribonucleotide reductase regulatory TP53 inducible subunit M2B77096200870993726Rat
621236Ubr5ubiquitin protein ligase E3 component n-recognin 577100019771109841Rat
1589002Papolb-ps1poly(A) polymerase beta, pseudogene 177116063071161623Rat
41391265LOC120093637uncharacterized LOC12009363777116916371217411Rat
11511017Rps29-ps17ribosomal protein S29, pseudogene 1777117973071180037Rat
9399550LOC103692890uncharacterized LOC10369289077123644171262574Rat
3228Odf1outer dense fiber of sperm tails 177126227071274621Rat
7607416LOC102550353uncharacterized LOC10255035377130366671313484Rat
621652Klf10KLF transcription factor 1077135261271358680Rat
401994930LOC134479897uncharacterized LOC13447989777135845171369931Rat
41034532LOC120093639uncharacterized LOC12009363977145915771469300Rat
2318945Rnf149-ps1ring finger protein 149, pseudogene 177148825771507639Rat
61934Azin1antizyme inhibitor 177153971171566515Rat
41029905LOC120093640uncharacterized LOC12009364077157036671581666Rat
41148025LOC120093641uncharacterized LOC12009364177159013271603969Rat
7709136LOC102550582uncharacterized LOC10255058277166083871668792Rat
1311082Atp6v1c1ATPase H+ transporting V1 subunit C177171932671757191Rat
402304406LOC134479714uncharacterized LOC13447971477176004671770100Rat
628703BaalcBAALC binder of MAP3K1 and KLF477180364071877608Rat
402157847LOC134479898uncharacterized LOC13447989877187825571884669Rat
628816Fzd6frizzled class receptor 677193991671971685Rat
41061388LOC120094004small nucleolar RNA SNORA1777197448771974651Rat
402008680LOC134479899uncharacterized LOC13447989977197651171985149Rat
628801Cthrc1collagen triple helix repeat containing 177200737272017654Rat
1565789Slc25a32solute carrier family 25 member 3277202453572045692Rat
1308458Dcaf13DDB1 and CUL4 associated factor 1377204582872081039Rat
41183437Gapdh-ps35Glyceraldehyde-3-phosphate dehydrogenase, pseudogene 3577210349372104939Rat
620001Rims2regulating synaptic membrane exocytosis 277213300472644059Rat
402164329LOC134479901uncharacterized LOC13447990177231754172322111Rat
9426508LOC103692901non-histone chromosomal protein HMG-17 pseudogene77234988272350279Rat
402066430LOC134479900uncharacterized LOC13447990077248042172481637Rat
402408906LOC134479902uncharacterized LOC13447990277248445372497734Rat
402000839LOC134479903uncharacterized LOC13447990377261179672618638Rat
41031770LOC120093966small nucleolar RNA SNORA4877266463572664777Rat
1310435Dcstampdendrocyte expressed seven transmembrane protein77269236472706983Rat
68376Dpysdihydropyrimidinase77270756672814183Rat
402428296LOC134479715uncharacterized LOC13447971577275131372755195Rat
1304943Lrp12LDL receptor related protein 1277282597972897308Rat
41122073LOC120093642uncharacterized LOC12009364277292140572926228Rat
1565735Gapdh-ps14Glyceraldehyde-3-phosphate dehydrogenase, pseudogene 1477295747372958474Rat
41255602LOC120094033U2 spliceosomal RNA77299804172998247Rat
2318573Zcchc10-ps1zinc finger CCHC-type containing 10, pseudogene 177315908173161656Rat
9196150LOC103692893uncharacterized LOC10369289377323348573300062Rat
11463877LOC108351485uncharacterized LOC10835148577355101373563516Rat
1306021Zfpm2zinc finger protein, multitype 277356373274001041Rat
41126079LOC120093643uncharacterized LOC12009364377362769473648370Rat
402218611LOC134479716uncharacterized LOC13447971677384966673876741Rat
41188976LOC120093644uncharacterized LOC12009364477396802273973264Rat
41120258LOC120093645uncharacterized LOC12009364577408798674100344Rat
7655393LOC102556196uncharacterized LOC10255619677425461274313222Rat
621857Oxr1oxidation resistance 177441360974850487Rat
41018571Rpl31-ps4ribosomal protein L31, pseudogene 477451699974517393Rat
41181863LOC120094047U6 spliceosomal RNA77455133774551443Rat
40939062LOC120093810uncharacterized LOC12009381077473747774775937Rat
708493Abraactin-binding Rho activating protein77485500874859076Rat
41216067Snora4small nucleolar RNA, H/ACA box 477487796274878050Rat
41313047LOC120094010small nucleolar RNA SNORA1777492895374929069Rat
41139740Bnip3-ps7BCL2 interacting protein 3, pseudogene 777492956274932385Rat
40947210LOC120094048U6 spliceosomal RNA77511796875118074Rat
41211778LOC120094034U2 spliceosomal RNA77528692475287055Rat
9388790LOC103692897anaphase-promoting complex subunit CDC26 pseudogene77534715575347565Rat
1594493Krt18-ps3keratin 18, pseudogene 377535138175353603Rat
402290254LOC134479717heterogeneous nuclear ribonucleoprotein A3-like77538460275396515Rat
628896Angpt1angiopoietin 177541595975668696Rat
7673863LOC102547184uncharacterized LOC10254718477566834975678340Rat
7688552LOC102547251uncharacterized LOC10254725177568135975685937Rat
402205826LOC134479718uncharacterized LOC13447971877574376675914835Rat
41157951LOC120093933U7 small nuclear RNA77591522775915289Rat
1562331Rspo2R-spondin 277598721776123984Rat
1311521Eif3eeukaryotic translation initiation factor 3 subunit E77622456776257346Rat
1594492Morf4l1-ps6mortality factor 4 like 1, pseudogene 677640495176413404Rat
1310430Emc2ER membrane protein complex subunit 277647189976508866Rat
41319180LOC120094042U4 spliceosomal RNA77662940776629542Rat
402261066LOC134479719uncharacterized LOC13447971977670960076711967Rat
1566279Tmem74transmembrane protein 7477681400076822633Rat
41130380LOC120094049U6 spliceosomal RNA77685585776855963Rat
402283641LOC134479720uncharacterized LOC13447972077694325176943775Rat
9273439Eif3e-ps1eukaryotic translation initiation factor 3 subunit E, pseudogene 177714205877150293Rat
3904Trhrthyrotropin releasing hormone receptor77723317577277988Rat
41084824LOC120094006small nucleolar RNA SNORA1777739601577396140Rat
1310624Nudcd1NudC domain containing 177743603577480651Rat
1596439Eny2ENY2, transcription and export complex 2 subunit77746588577489637Rat
1310406Pkhd1l1PKHD1 like 177750506377679994Rat
1307293Ebag9estrogen receptor binding site associated antigen 977769521377713565Rat
1564335Sybusyntabulin77773166277833413Rat
402301126LOC134479721uncharacterized LOC13447972177774259277751749Rat
1309489Smg5l1Smg5 nonsense mediated mRNA decay factor like 177780212677936486Rat
41079558LOC120094031U2 spliceosomal RNA77795381877953961Rat
41104726LOC120093973small nucleolar RNA SNORA4877799081377990944Rat
41357363LOC120093648uncharacterized LOC12009364877801742678051773Rat
621264Kcnv1potassium voltage-gated channel modifier subfamily V member 177814531978153794Rat
11459737LOC108351622uncharacterized LOC10835162277871130278715854Rat
41402332LOC120093856uncharacterized LOC12009385677878950578790109Rat
1582945Elavl1-ps1ELAV like RNA binding protein 1, pseudogene 177979693779798593Rat
6500921Rpl6-ps4ribosomal protein L6, pseudogene 477998816179991755Rat
7680464LOC102551754uncharacterized LOC10255175478054312780548726Rat
1598176Eif4b-ps2eukaryotic translation initiation factor 4B, pseudogene 278061181480613681Rat
1594530Csmd3CUB and Sushi multiple domains 378063734181956469Rat
9394853Hdac1-ps2histone deacetylase 1, pseudogene 278081558980827464Rat
40946632LOC120093991small nucleolar RNA SNORA1778088560280885725Rat
41164982LOC120093811uncharacterized LOC12009381178088586280950043Rat

Markers in Region
The following Markers overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolExpected SizeChrStartStopSpeciesMatch
10221D7Arb1722675999866159998887Ratregion
34375D7Mgh1012176947098569471106Ratregion
34499D7Mgh713077162115471621284Ratregion
36099D7Rat2514475867869258678836Ratregion
37236D7Rat5111674913799949138115Ratregion
37256D7Rat10614774579696945797116Ratregion
37258D7Rat10723274630749046307722Ratregion
37004D7Rat18116273996036639960528Ratregion
37722D7Rat7919975971157059711769Ratregion
36422D7Rat2616474968283249682996Ratregion
36731D7Rat2415277110301171103163Ratregion
34999D7Rat4414676388985863890004Ratregion
35749D7Rat4517676578784165788017Ratregion
39830D7Rat16324276692318466923426Ratregion
39884D7Rat16920774960570249605909Ratregion
39902D7Rat16824975162236351622612Ratregion
38198D7Rat6923476234578562346019Ratregion
40442D7Rat19113175674390356744034Ratregion
40598D7Rat17915574329759843297753Ratregion
38606D7Rat11022777097493670975163Ratregion
40058D7Rat14615275550278755502939Ratregion
38794D7Rat7323675549858455498820Ratregion
38972D7Rat8423373933649239336725Ratregion
39012D7Rat9825075163970451639954Ratregion
39016D7Rat10323174299622642996457Ratregion
39094D7Rat5823376015030860150541Ratregion
39480D7Rat16523376761378767614020Ratregion
42825D7Rat21224774263760142637848Ratregion
42826D7Rat21013974831818848318327Ratregion
42827D7Rat21121974890171148901930Ratregion
42830D7Rat20725575852737658527631Ratregion
42831D7Rat22814775986125059861397Ratregion
42832D7Rat17710477653240376532507Ratregion
42833D7Rat20622477272503772725261Ratregion
42834D7Rat20415277466615974666311Ratregion
41516D7Rat14836874741919947419567Ratregion
42337D7Rat22123074067402540674255Ratregion
42339D7Rat22024376041747160417714Ratregion
42340D7Rat23014576517964865179793Ratregion
40812D7Rat8321873668765936687877Ratregion
41078D7Rat14412277002885170028973Ratregion
44248D7Got3114673854205138542197Ratregion
44251D7Got15724974599453345994782Ratregion
44259D7Got4016475598877955988943Ratregion
44262D7Got4425776041351360413770Ratregion
44263D7Got3823075711465957114889Ratregion
60577D7Got5029477931451879314812Ratregion
67815D7Uwm1115674848215148482307Ratregion
67826D7Uwm1412177779646577796586Ratregion
67832D7Uwm1929675720437557204671Ratregion
61292D7Uwm913973741272637412865Ratregion
67753D7Uwm2033776051773660518073Ratregion
1631211D7Got22416577791905477919219Ratregion
1632072D7Wox3312875183372351833851Ratregion
1632357D7Got22917876349570663495884Ratregion
1629994D7Got22019076594795665948146Ratregion
1632961D7Got23017874842822748428405Ratregion
1633186D7Wox2718476062802660628210Ratregion
1635672D7Got23617374454281544542988Ratregion
1636569D7Got21915973758999637590155Ratregion
1636849D7Got22818974895564048955829Ratregion
1637797D7Got23222676446398764464213Ratregion
1634664D7Got22221977305913373059352Ratregion
7193117Myf642074470004744700467Ratregion
5031474AU04820418776906628969066476Ratregion
5034049RH14116618577090028770900472Ratregion
5031734AU04732824674263760142637847Ratregion
5032074AU02888617673728064437280820Ratregion
5027621AI19500512275656700956567131Ratregion
5033413RH13874459374884030348840896Ratregion
5056243RH14426612275400007654000198Ratregion
5054781RH14342176575458448854585253Ratregion
5058082BF38658818577768514177685326Ratregion
5058444BI29020457477205156472052138Ratregion
5050918RH13433383475761787157618705Ratregion
5041252RH12875030276500652565006827Ratregion
5046568RH13182820977651463576514844Ratregion
5047816RH13254519576479934864799543Ratregion
5049234RH13336387477005269070053564Ratregion
5049788RH13368220875833476458334972Ratregion
5048560RH13297420375747426757474470Ratregion
5074180RH13786724275896777858968020Ratregion
5076528RH13922887875761787157618749Ratregion
5076568RH13925124176839092568391166Ratregion
5072610RH13694973475446624654466980Ratregion
5080634RH14169321375866530058665513Ratregion
5080704RH14173321874825420348254421Ratregion
5077884RH14001556276479394364794505Ratregion
5073348RH13738418276837994168380123Ratregion
5066628AU04824516975366739953667568Ratregion
5067666AU04760816077703459977034759Ratregion
5068374AU04718517075582255055822720Ratregion
5068786AU04693228176680304366803324Ratregion
5068862AU04688028575890906858909353Ratregion
5069752AU02912523476446399064464224Ratregion
5060356AW53152115977459345474593613Ratregion
5089043AU04892114174693133046931471Ratregion
5089073AU04893917076594795965948129Ratregion
5081202RH14202362476488162464882248Ratregion
5085661AW53551920176966272269662923Ratregion
5504466PMC212738P320276477224964772451Ratregion
5507091UniSTS:22445117076538293765383107Ratregion
5501400Myf680974470004444700853Ratregion
5501734MARC_10159-10160:996678914:141176752664667527057Ratregion
5501962MARC_21230-21231:1032890530:140674470001244700418Ratregion
5501700MGF85273684421636845068Ratregion
Position Markers

Peak: (D7Rat25)
Rat AssemblyChrPosition (strand)Source
GRCr8758,678,692 - 58,678,836 (+)Marker Load Pipeline
mRatBN7.2756,793,210 - 56,793,354 (+)MAPPER
Rnor_6.0763,372,611 - 63,372,754NCBI
Rnor_5.0763,596,501 - 63,596,644UniSTS
RGSC_v3.4760,576,516 - 60,576,660RGD
RGSC_v3.4760,576,517 - 60,576,660UniSTS
RGSC_v3.1760,597,247 - 60,597,390RGD
Celera753,538,981 - 53,539,124UniSTS
RH 3.4 Map7494.5RGD
RH 3.4 Map7494.5UniSTS
RH 2.0 Map7423.6RGD
SHRSP x BN Map736.71RGD
FHH x ACI Map733.46RGD
Cytogenetic Map7q22UniSTS


QTLs in Region (GRCr8)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1354644Spl4Serum phospholipid level QTL 44.9blood phospholipid amount (VT:0006084)blood phospholipid level (CMO:0001169)72154197751639954Rat
7411569Bw137Body weight QTL 1370.001body mass (VT:0001259)body weight gain (CMO:0000420)72380760668807606Rat
1578652Bmd15Bone mineral density QTL 155.2femur mineral mass (VT:0010011)trabecular volumetric bone mineral density (CMO:0001729)71051708662346019Rat
1549840Bss5Bone structure and strength QTL 59.8femur strength trait (VT:0010010)femur midshaft polar moment of inertia (CMO:0001669)72663805771638057Rat
1300127Srn1Serum renin concentration QTL 13.87blood renin amount (VT:0003349)plasma renin activity level (CMO:0000116)72417947886817926Rat
1357336Gluco6Glucose level QTL 63.4blood glucose amount (VT:0000188)serum glucose level (CMO:0000543)75170064396700643Rat
1358361Sradr5Stress Responsive Adrenal Weight QTL 55.55adrenal gland mass (VT:0010420)both adrenal glands wet weight (CMO:0000164)731770293110435881Rat
1357338Stl17Serum triglyceride level QTL 173.23blood triglyceride amount (VT:0002644)serum triglyceride level (CMO:0000360)771621154114982716Rat
70159Bp61Blood pressure QTL 610.0001arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)773618702118618702Rat
2298547Neuinf5Neuroinflammation QTL 53.7nervous system integrity trait (VT:0010566)spinal cord Cd74 protein level (CMO:0002131)71011291660150541Rat
1354637Scl30Serum cholesterol level QTL 303.7blood cholesterol amount (VT:0000180)blood total cholesterol level (CMO:0000051)72154197751639954Rat
2317059Aia15Adjuvant induced arthritis QTL 152.46joint integrity trait (VT:0010548)right rear ankle joint diameter (CMO:0002150)74968283263890004Rat
1300151Bp181Blood pressure QTL 1813.36arterial blood pressure trait (VT:2000000)diastolic blood pressure (CMO:0000005)755498584105834451Rat
1300149Cm6Cardiac mass QTL 64.09heart mass (VT:0007028)heart left ventricle weight to body weight ratio (CMO:0000530)71104117804Rat
631201Panci1Pancreas inflammation QTL 100.001pancreas integrity trait (VT:0010560)percentage of study population displaying chronic pancreatitis at a point in time (CMO:0001214)773557047118557047Rat
1582260Bw72Body weight QTL 723.20.0043body mass (VT:0001259)body weight (CMO:0000012)7139960528Rat
1582261Bw69Body weight QTL 693.20.0048body mass (VT:0001259)body weight (CMO:0000012)7139960528Rat
61357Bp38Blood pressure QTL 381.60.052arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)740540077123682549Rat
1582262Bw75Body weight QTL 7530.0038body mass (VT:0001259)body weight (CMO:0000012)7139960528Rat
2303629Vencon3Ventilatory control QTL 37.25respiration trait (VT:0001943)respiration rate (CMO:0000289)74299622658678836Rat
70190Mcs6Mammary carcinoma susceptibility QTL 62.29mammary gland integrity trait (VT:0010552)mammary tumor number (CMO:0000343)72862457565788017Rat
2316947Rf58Renal function QTL 587.8kidney glomerulus morphology trait (VT:0005325)index of glomerular damage (CMO:0001135)749682832115766396Rat
10450862Kidm55Kidney mass QTL 554.9kidney mass (VT:0002707)kidney weight (CMO:0000081)772725037117725037Rat
1300132Bp182Blood pressure QTL 1823.49arterial blood pressure trait (VT:2000000)blood pressure time series experimental set point of the baroreceptor response (CMO:0002593)72154197786817926Rat
10450856Livw4Liver weight QTL 43.8liver mass (VT:0003402)liver weight (CMO:0000092)772725037117725037Rat
7411654Foco25Food consumption QTL 259.30.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)777807807122807807Rat
2316955Stl24Serum triglyceride level QTL 247.1blood triglyceride amount (VT:0002644)plasma triglyceride level (CMO:0000548)749682832115766396Rat
1300138Hrtrt9Heart rate QTL 94.72heart pumping trait (VT:2000009)heart rate (CMO:0000002)71049882055498820Rat
61369Mcs2Mammary carcinoma susceptibility QTL 23.38mammary gland integrity trait (VT:0010552)mammary tumor number (CMO:0000343)72092049437412865Rat
10402855Bp379Blood pressure QTL 3790.21arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)778682549123682549Rat
2316952Pur22Proteinuria QTL 225.2urine protein amount (VT:0005160)urine protein level (CMO:0000591)749682832115766396Rat
70207Niddm31Non-insulin dependent diabetes mellitus QTL 313.9blood glucose amount (VT:0000188)plasma glucose level (CMO:0000042)72005723265057232Rat
1358891Bp265Blood pressure QTL 2652.21arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)771827901136544683Rat
10053722Scort27Serum corticosterone level QTL 272.410.0083blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)74511390390113903Rat
9590102Sffal5Serum free fatty acids level QTL 58.620.001blood free fatty acid amount (VT:0001553)plasma free fatty acids level (CMO:0000546)7721609752216097Rat
631503Bp102Blood pressure QTL 1021.9arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)7170952746709527Rat
2317035Aia16Adjuvant induced arthritis QTL 162.71joint integrity trait (VT:0010548)right rear ankle joint diameter (CMO:0002150)771103011106126789Rat
10059605Kidm47Kidney mass QTL 472.910.05kidney mass (VT:0002707)both kidneys wet weight to body weight ratio (CMO:0000340)74913799967614020Rat
1298525Cm1Cardiac mass QTL 12.7heart mass (VT:0007028)heart wet weight (CMO:0000069)756625161101625161Rat
631513Scl7Serum cholesterol level QTL 74.1blood cholesterol amount (VT:0000180)serum total cholesterol level (CMO:0000363)73984590284845902Rat
10059592Kidm45Kidney mass QTL 453.950.025kidney mass (VT:0002707)both kidneys wet weight to body weight ratio (CMO:0000340)7946087754460877Rat
10755453Coatc12Coat color QTL 120coat/hair pigmentation trait (VT:0010463)pigmented ventral coat/hair area to total ventral coat/hair area ratio (CMO:0001812)73299870277998702Rat
631504Cm27Cardiac mass QTL 273.45heart left ventricle mass (VT:0007031)heart left ventricle wet weight (CMO:0000071)746307490127866166Rat
61410Bw19Body weight QTL 196.20.001body mass (VT:0001259)body weight (CMO:0000012)7166965846669658Rat
7411605Foco14Food consumption QTL 1424.10.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)73617876481178764Rat
1559283Emca4Estrogen-induced mammary cancer QTL 43.7mammary gland integrity trait (VT:0010552)percentage of study population developing mammary tumors during a period of time (CMO:0000948)763889858108889858Rat
1643004Pain2Pain QTL 21mechanical nociception trait (VT:0002734)self mutilation severity score (CMO:0002145)71011291699900612Rat
738030Anxrr8Anxiety related response QTL 84.1exploratory behavior trait (VT:0010471)number of entries into a discrete space in an experimental apparatus (CMO:0000960)74847504993475049Rat
7411607Foco15Food consumption QTL 150.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)777807807122807807Rat
631534Lnnr1Liver neoplastic nodule remodeling QTL 13.850.001liver integrity trait (VT:0010547)liver remodeling tumorous lesion number to liver total tumorous lesion number ratio (CMO:0001705)73617876481178764Rat
634336Anxrr17Anxiety related response QTL 173.66locomotor behavior trait (VT:0001392)number of entries into a discrete space in an experimental apparatus (CMO:0000960)71509236116977875Rat
1298528Bp169Blood pressure QTL 1690.0001arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)762963207107963207Rat
1576303Ept7Estrogen-induced pituitary tumorigenesis QTL 73.7pituitary gland mass (VT:0010496)pituitary gland wet weight (CMO:0000853)763889858108889858Rat
738033Anxrr6Anxiety related response QTL 64.1exploratory behavior trait (VT:0010471)percentage of entries into a discrete space in an experimental apparatus (CMO:0000961)71746044762460447Rat
61435Cia4Collagen induced arthritis QTL 45.3joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)75999866163890004Rat
2303582Gluco53Glucose level QTL 533blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)74860308793603087Rat
631540Bw9Body weight QTL 94.5body mass (VT:0001259)body weight (CMO:0000012)771621154119349044Rat
61439Cia8Collagen induced arthritis QTL 85.1joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)72718291472182914Rat


Additional Information

RGD Curation Notes
Note Type Note Reference
qtl_cross_type intercross 7401255
qtl_general measurement method: At 16 weeks of age animals were individually housed and given self-selection diet (protein, carbohydrate and fat diet in three separate cups); percentage of carbohydrate intake calculated as the relative amount of calories provided by carbohydrates against total calories consumed 7401255
qtl_general carbohydrate and fat intake are highly correlated 7401255
qtl_general software package used: multiple interval mapping (MIM); MultiQTL software (version 2.6); ANOVA 7401255
qtl_general number of animals used: 94 F2 females 7401255
qtl_map spans from 51.1-67.0 Mb; peak at 59.1 Mb 7401255