Rida (reactive intermediate imine deaminase A homolog)

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Gene: Rida (reactive intermediate imine deaminase A homolog) Rattus norvegicus

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Symbol:

Rida

Name:

reactive intermediate imine deaminase A homolog

Description:

ENCODES a protein that exhibits endoribonuclease activity, producing 3'-phosphomonoesters; ion binding; long-chain fatty acid binding; INVOLVED IN brain development; G1 to G0 transition; kidney development; ASSOCIATED WITH Experimental Liver Cirrhosis; Experimental Liver Neoplasms; FOUND IN cytosol; mitochondrial matrix; nucleus; INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; 2,4-dinitrotoluene; 3-chloropropane-1,2-diol

Type:

protein-coding

RefSeq Status:

PROVISIONAL

Also known as:

14.5 kDa translational inhibitor protein; 2-iminobutanoate/2-iminopropanoate deaminase; heat-responsive protein 12; Hrsp12; L-PSP; perchloric acid soluble protein; perchloric acid-soluble protein; Psp; PSP1; ribonuclease UK114; rp14.5; translation inhibitor L-PSP ribonuclease; UK114 antigen homolog

Orthologs:

Homo sapiens (human) : RIDA (reactive intermediate imine deaminase A homolog) HGNC Alliance
Mus musculus (house mouse) : Rida (reactive intermediate imine deaminase A homolog) MGI Alliance
Chinchilla lanigera (long-tailed chinchilla) : Rida (reactive intermediate imine deaminase A homolog)
Pan paniscus (bonobo/pygmy chimpanzee) : RIDA (reactive intermediate imine deaminase A homolog)
Canis lupus familiaris (dog) : RIDA (reactive intermediate imine deaminase A homolog)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Rida (reactive intermediate imine deaminase A homolog)
Sus scrofa (pig) : RIDA (reactive intermediate imine deaminase A homolog)

more info ...

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	RIDA (reactive intermediate imine deaminase A homolog)	HGNC	EggNOG, Ensembl, HomoloGene, Inparanoid, NCBI, OMA, OrthoDB, OrthoMCL, Panther, PhylomeDB, Treefam
Mus musculus (house mouse):	Rida (reactive intermediate imine deaminase A homolog)	HGNC	Treefam, EggNOG, OrthoMCL, NCBI, OMA, HomoloGene, Inparanoid, Panther, PhylomeDB, OrthoDB, Ensembl
Chinchilla lanigera (long-tailed chinchilla):	Rida (reactive intermediate imine deaminase A homolog)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	RIDA (reactive intermediate imine deaminase A homolog)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	RIDA (reactive intermediate imine deaminase A homolog)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Rida (reactive intermediate imine deaminase A homolog)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	RIDA (reactive intermediate imine deaminase A homolog)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Alliance orthologs ³
Mus musculus (house mouse):	Rida (reactive intermediate imine deaminase A homolog)	Alliance	DIOPT (Ensembl Compara, Hieranoid, InParanoid, OMA, OrthoFinder, OrthoInspector, PANTHER, PhylomeDB, TreeFam)
Homo sapiens (human):	RIDA (reactive intermediate imine deaminase A homolog)	Alliance	DIOPT (Ensembl Compara, HGNC, Hieranoid, InParanoid, OrthoFinder, OrthoInspector, PANTHER, PhylomeDB, TreeFam)
Saccharomyces cerevisiae (baker's yeast):	HMF1 (null)	Alliance	DIOPT (Ensembl Compara, Hieranoid, InParanoid, OMA, OrthoFinder, OrthoInspector, PhylomeDB, TreeFam)
Caenorhabditis elegans (roundworm):	C23G10.2 (null)	Alliance	DIOPT (Ensembl Compara, Hieranoid, InParanoid, OMA, OrthoFinder, OrthoInspector, PANTHER, PhylomeDB, TreeFam)
Drosophila melanogaster (fruit fly):	UK114 (null)	Alliance	DIOPT (Ensembl Compara, Hieranoid, InParanoid, OMA, OrthoFinder, OrthoInspector, PhylomeDB, TreeFam)
Danio rerio (zebrafish):	rida (null)	Alliance	DIOPT (Ensembl Compara, Hieranoid, InParanoid, OMA, OrthoFinder, OrthoInspector, PANTHER, PhylomeDB, TreeFam)
Saccharomyces cerevisiae (baker's yeast):	MMF1 (null)	Alliance	DIOPT (Ensembl Compara, Hieranoid, InParanoid, OMA, OrthoFinder, OrthoInspector, PhylomeDB, TreeFam)

Latest Assembly:

Rnor_6.0 - RGSC Genome Assembly v6.0

NCBI Annotation Information:

Annotation category: partial on reference assembly

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Rnor_6.0	7	73,256,506 - 73,270,308 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_5.0	7	73,422,772 - 73,436,372 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	7	69,930,464 - 69,944,267 (-)	NCBI	RGSC3.4		rn4	RGSC3.4
RGSC_v3.1	7	69,951,193 - 69,964,994 (-)	NCBI
Celera	7	62,792,438 - 62,806,237 (-)	NCBI		Celera
Cytogenetic Map	7	q22	NCBI

JBrowse:

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Model

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Disease Annotations

Gene-Chemical Interaction Annotations

Gene Ontology Annotations

References - curated

References - uncurated

RGD Disease Portals

Genomics

Comparative Map Data

QTLs in Region (Rnor_6.0)

miRNA Target Status

Sequence

Nucleotide Sequences

Protein Sequences

Transcriptome

Promoters

Strain Variation

Strain Sequence Variants (Rnor 5.0)

Additional Information

External Database Links

Nomenclature History

RGD Curation Notes

More on Rida
	Alliance Gene
	NCBI Gene
	Ensembl Gene
	JBrowse: rn5 rn6
	NCBI Genome Data Viewer

RGD Object Information
RGD ID:	70940
Created:	2002-07-09
Species:	Rattus norvegicus
Last Modified:	2019-01-30
Status:	ACTIVE

Functional Annotation unavailable	Annotation Distribution unavailable	Genomic Variants unavailble for Mouse Genomic Variants unavailable
Functional Annotation	Annotation Distribution	Genomic Variants

Protein-Protein Interactions unavailable	Genome Viewer unavailable	Damaging Variants unavailble for Mouse Damaging Variants unavailable
Protein-Protein Interactions	Genome Viewer	Damaging Variants

Annotation Comparison unavailable	OLGA unavailable
Annotation Comparison	OLGA	Excel (Download)

RGD Manual Annotations