LOC108351471 (uncharacterized LOC108351471) - Rat Genome Database

Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
Advanced Search (OLGA)
Gene: LOC108351471 (uncharacterized LOC108351471) Rattus norvegicus
Analyze
Symbol: LOC108351471
Name: uncharacterized LOC108351471
RGD ID: 11399049
Description:
Type: ncrna
RefSeq Status: MODEL
Latest Assembly: GRCr8 - GRCr8 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8764,568,570 - 64,586,337 (-)NCBIGRCr8
mRatBN7.2762,681,017 - 62,702,138 (-)NCBImRatBN7.2mRatBN7.2
Rnor_6.0770,100,457 - 70,168,262 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Celera759,781,189 - 59,847,105 (-)NCBICelera
Cytogenetic Map7q22NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model




.

.
Variants in LOC108351471
143 total Variants

1 to 10 of 36 rows
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
7411569Bw137Body weight QTL 1370.001body mass (VT:0001259)body weight gain (CMO:0000420)72192119566921195Rat
1300179Kidm5Kidney mass QTL 53.51kidney mass (VT:0002707)left kidney wet weight (CMO:0000083)743747012135012528Rat
2293667Bss42Bone structure and strength QTL 427.250.0001lumbar vertebra size trait (VT:0010518)lumbar vertebra cross-sectional area (CMO:0001689)74765143992651439Rat
10053722Scort27Serum corticosterone level QTL 272.410.0083blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)74322875088228750Rat
1641885Alcrsp9Alcohol response QTL 9alcohol metabolism trait (VT:0015089)blood ethanol level (CMO:0000535)72409960669099606Rat
1549840Bss5Bone structure and strength QTL 59.8femur strength trait (VT:0010010)femur midshaft polar moment of inertia (CMO:0001669)72475184169751841Rat
2317035Aia16Adjuvant induced arthritis QTL 162.71joint integrity trait (VT:0010548)right rear ankle joint diameter (CMO:0002150)759238038104238038Rat
1300127Srn1Serum renin concentration QTL 13.87blood renin amount (VT:0003349)plasma renin activity level (CMO:0000116)72940968384928080Rat
10059605Kidm47Kidney mass QTL 472.910.05kidney mass (VT:0002707)both kidneys wet weight to body weight ratio (CMO:0000340)74725178365728867Rat
2293678Bss24Bone structure and strength QTL 246.710.0001femur morphology trait (VT:0000559)femur cross-sectional area (CMO:0001661)74765143992651439Rat

1 to 10 of 36 rows






RefSeq Acc Id: XR_010053729
Type: NON-CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8764,568,570 - 64,586,337 (-)NCBI
RefSeq Acc Id: XR_010053730
Type: NON-CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8764,568,570 - 64,586,337 (-)NCBI
RefSeq Acc Id: XR_010053731
Type: NON-CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8764,568,570 - 64,586,337 (-)NCBI
RefSeq Acc Id: XR_010053732
Type: NON-CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8764,568,570 - 64,586,337 (-)NCBI
RefSeq Acc Id: XR_010053733
Type: NON-CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8764,568,570 - 64,586,337 (-)NCBI
RefSeq Acc Id: XR_010053734
Type: NON-CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8764,568,570 - 64,586,337 (-)NCBI
RefSeq Acc Id: XR_010053735
Type: NON-CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8764,568,570 - 64,586,337 (-)NCBI


Database
Acc Id
Source(s)
BioCyc Gene G2FUF-33802 BioCyc
NCBI Gene LOC108351471 ENTREZGENE
PhenoGen LOC108351471 PhenoGen
RNAcentral URS0000CCE471 RNACentral
  URS0000CCF7A8 RNACentral
  URS0000CCF7F2 RNACentral
  URS0000CCF917 RNACentral


Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2016-08-02 LOC108351471  uncharacterized LOC108351471      Symbol and Name status set to provisional 70820 PROVISIONAL