Dcstamp (Rattus norvegicus - Norway rat) |
Rat Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
---|
GRCr8 | 7 | 72,692,364 - 72,706,983 (+) | NCBI | GRCr8 | GRCr8 | | GRCr8 | GRCr8 Ensembl | 7 | 72,671,477 - 72,707,009 (+) | Ensembl | | | | GRCr8 | mRatBN7.2 | 7 | 70,807,455 - 70,822,067 (+) | NCBI | mRatBN7.2 | mRatBN7.2 | | | mRatBN7.2 Ensembl | 7 | 70,807,581 - 70,822,078 (+) | Ensembl | | | | mRatBN7.2 | Rnor_6.0 | 7 | 78,725,173 - 78,756,160 (+) | NCBI | Rnor_6.0 | Rnor_6.0 | rn6 | Rnor6.0 | Rnor_6.0 Ensembl | 7 | 78,649,875 - 78,650,906 (+) | Ensembl | | | rn6 | Rnor6.0 | Rnor_6.0 Ensembl | 7 | 78,732,904 - 78,741,588 (+) | Ensembl | | | rn6 | Rnor6.0 | Rnor_5.0 | 7 | 77,597,411 - 77,598,623 (-) | NCBI | Rnor_5.0 | Rnor_5.0 | rn5 | | RGSC_v3.4 | 7 | 75,318,788 - 75,336,382 (+) | NCBI | RGSC_v3.4 | RGSC_v3.4 | rn4 | | Celera | 7 | 67,860,809 - 67,891,645 (+) | NCBI | | Celera | | | RGSC_v3.1 | 7 | 75,349,840 - 75,357,112 (+) | NCBI | | | | | Cytogenetic Map | 7 | q31 | NCBI | | | | |
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DCSTAMP (Homo sapiens - human) |
Human Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
GRCh38 | 8 | 104,339,796 - 104,356,689 (+) | NCBI | GRCh38 | GRCh38 | hg38 | GRCh38 | GRCh38.p14 Ensembl | 8 | 104,339,087 - 104,356,689 (+) | Ensembl | | | hg38 | GRCh38 | GRCh37 | 8 | 105,352,024 - 105,368,917 (+) | NCBI | GRCh37 | GRCh37 | hg19 | GRCh37 | Build 36 | 8 | 105,421,230 - 105,438,092 (+) | NCBI | Build 36 | Build 36 | hg18 | NCBI36 | Build 34 | 8 | 105,421,229 - 105,438,092 | NCBI | | | | | Celera | 8 | 101,538,720 - 101,555,582 (+) | NCBI | | Celera | | | Cytogenetic Map | 8 | q22.3 | NCBI | | | | | HuRef | 8 | 100,553,073 - 100,569,966 (+) | NCBI | | HuRef | | | CHM1_1 | 8 | 105,392,829 - 105,409,722 (+) | NCBI | | CHM1_1 | | | T2T-CHM13v2.0 | 8 | 105,466,609 - 105,484,210 (+) | NCBI | | T2T-CHM13v2.0 | | |
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Dcstamp (Mus musculus - house mouse) |
Mouse Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
GRCm39 | 15 | 39,609,326 - 39,624,334 (+) | NCBI | GRCm39 | GRCm39 | mm39 | | GRCm39 Ensembl | 15 | 39,609,326 - 39,624,334 (+) | Ensembl | | GRCm39 Ensembl | | GRCm39 | GRCm38 | 15 | 39,745,930 - 39,760,938 (+) | NCBI | GRCm38 | GRCm38 | mm10 | GRCm38 | GRCm38.p6 Ensembl | 15 | 39,745,930 - 39,760,938 (+) | Ensembl | | | mm10 | GRCm38 | MGSCv37 | 15 | 39,577,478 - 39,592,480 (+) | NCBI | MGSCv37 | MGSCv37 | mm9 | NCBIm37 | MGSCv36 | 15 | 39,576,006 - 39,591,008 (+) | NCBI | | MGSCv36 | mm8 | | Celera | 15 | 40,229,920 - 40,244,989 (+) | NCBI | | Celera | | | Cytogenetic Map | 15 | B3.1 | NCBI | | | | | cM Map | 15 | 15.51 | NCBI | | | | |
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Dcstamp (Chinchilla lanigera - long-tailed chinchilla) |
Chinchilla Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
ChiLan1.0 Ensembl | NW_004955417 | 28,155,842 - 28,168,049 (+) | Ensembl | | | | | ChiLan1.0 | NW_004955417 | 28,156,046 - 28,169,481 (+) | NCBI | ChiLan1.0 | ChiLan1.0 | | |
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DCSTAMP (Pan paniscus - bonobo/pygmy chimpanzee) |
Bonobo Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
NHGRI_mPanPan1-v2 | 7 | 121,690,535 - 121,709,115 (+) | NCBI | | NHGRI_mPanPan1-v2 | | | NHGRI_mPanPan1 | 8 | 97,223,284 - 97,231,562 (+) | NCBI | | NHGRI_mPanPan1 | | | Mhudiblu_PPA_v0 | 8 | 100,967,757 - 100,985,384 (+) | NCBI | Mhudiblu_PPA_v0 | Mhudiblu_PPA_v0 | panPan3 | | PanPan1.1 | 8 | 103,121,332 - 103,138,223 (+) | NCBI | PanPan1.1 | PanPan1.1 | panPan2 | | PanPan1.1 Ensembl | 8 | 103,121,332 - 103,138,223 (+) | Ensembl | | | panPan2 | panpan1.1 |
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DCSTAMP (Canis lupus familiaris - dog) |
Dog Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
CanFam3.1 | 13 | 5,542,474 - 5,559,433 (+) | NCBI | CanFam3.1 | CanFam3.1 | canFam3 | CanFam3.1 | CanFam3.1 Ensembl | 13 | 5,542,425 - 5,571,968 (+) | Ensembl | | | canFam3 | CanFam3.1 | Dog10K_Boxer_Tasha | 13 | 5,550,114 - 5,580,387 (+) | NCBI | Dog10K_Boxer_Tasha | Dog10K_Boxer_Tasha | | | ROS_Cfam_1.0 | 13 | 5,789,666 - 5,820,024 (+) | NCBI | ROS_Cfam_1.0 | ROS_Cfam_1.0 | | | ROS_Cfam_1.0 Ensembl | 13 | 5,789,570 - 5,806,821 (+) | Ensembl | | | | ROS_Cfam_1.0 Ensembl | UMICH_Zoey_3.1 | 13 | 5,558,282 - 5,588,532 (+) | NCBI | | UMICH_Zoey_3.1 | | | UNSW_CanFamBas_1.0 | 13 | 5,677,761 - 5,708,007 (+) | NCBI | | UNSW_CanFamBas_1.0 | | | UU_Cfam_GSD_1.0 | 13 | 5,699,620 - 5,729,895 (+) | NCBI | UU_Cfam_GSD_1.0 | UU_Cfam_GSD_1.0 | | |
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Dcstamp (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
Squirrel Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
HiC_Itri_2 | NW_024405303 | 32,237,463 - 32,245,440 (-) | NCBI | | HiC_Itri_2 | | | SpeTri2.0 Ensembl | NW_004936470 | 39,664,511 - 39,671,532 (-) | Ensembl | | SpeTri2.0 Ensembl | | | SpeTri2.0 | NW_004936470 | 39,664,573 - 39,671,532 (-) | NCBI | SpeTri2.0 | SpeTri2.0 | | SpeTri2.0 |
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DCSTAMP (Sus scrofa - pig) |
Pig Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
Sscrofa11.1 Ensembl | 4 | 32,913,152 - 32,928,235 (-) | Ensembl | | | susScr11 | Sscrofa11.1 | Sscrofa11.1 | 4 | 32,912,320 - 32,928,323 (-) | NCBI | Sscrofa11.1 | Sscrofa11.1 | susScr11 | Sscrofa11.1 | Sscrofa10.2 | 4 | 35,670,769 - 35,685,853 (-) | NCBI | Sscrofa10.2 | Sscrofa10.2 | susScr3 | |
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DCSTAMP (Chlorocebus sabaeus - green monkey) |
Green Monkey Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
ChlSab1.1 | 8 | 99,174,778 - 99,193,539 (+) | NCBI | ChlSab1.1 | ChlSab1.1 | chlSab2 | | ChlSab1.1 Ensembl | 8 | 99,185,423 - 99,193,058 (+) | Ensembl | | ChlSab1.1 Ensembl | chlSab2 | Vervet-AGM | Vero_WHO_p1.0 | NW_023666039 | 41,377,453 - 41,386,732 (-) | NCBI | Vero_WHO_p1.0 | Vero_WHO_p1.0 | | |
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Dcstamp (Heterocephalus glaber - naked mole-rat) |
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