D7Got224 Marker Search Result - Rat Genome Database

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Marker: D7Got224

Symbol: D7Got224
Previously known as: oxsts3057; OT10.15; D0Got163; 
RGD ID: 1631211
Expected Size: 165 (bp)
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
GRCr8777,919,054 - 77,919,219 (+)Marker Load Pipeline
mRatBN7.2776,034,400 - 76,034,565 (+)MAPPERmRatBN7.2
Rnor_6.0783,787,452 - 83,787,616NCBIRnor6.0
Rnor_5.0783,803,535 - 83,803,699UniSTSRnor5.0
RGSC_v3.4780,763,030 - 80,763,194UniSTSRGSC3.4
Celera773,005,008 - 73,005,172UniSTS
Cytogenetic Map7q31UniSTS
Is Marker For: Genes:   Smg5l1  




#
Reference Title
Reference Citation
1. Data downloaded from Wellcome Trust, University of Oxford Data downloaded from Wellcome Trust, University of Oxford
2. UniSTS Pipeline RGD automated pipelines


 
Forward Primer GATCCCTAAAATCTAAAGTTTATA
Reverse Primer GATCTTCATACATTTACTACACT
 


The following Genes overlap with this region.    Full Report CSV TAB Printer Analysis Tools
RGD ID
Symbol
Name
Chr
Start
Stop
Species
1309489Smg5l1Smg5 nonsense mediated mRNA decay factor like 177591752776051832Rat
GenBank Nucleotide AU028638 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles


1 to 10 of 38 rows
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
1300179Kidm5Kidney mass QTL 53.51kidney mass (VT:0002707)left kidney wet weight (CMO:0000083)743747012135012528Rat
2293667Bss42Bone structure and strength QTL 427.250.0001lumbar vertebra size trait (VT:0010518)lumbar vertebra cross-sectional area (CMO:0001689)74765143992651439Rat
10053722Scort27Serum corticosterone level QTL 272.410.0083blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)74322875088228750Rat
2317035Aia16Adjuvant induced arthritis QTL 162.71joint integrity trait (VT:0010548)right rear ankle joint diameter (CMO:0002150)759238038104238038Rat
1300127Srn1Serum renin concentration QTL 13.87blood renin amount (VT:0003349)plasma renin activity level (CMO:0000116)72940968384928080Rat
2293678Bss24Bone structure and strength QTL 246.710.0001femur morphology trait (VT:0000559)femur cross-sectional area (CMO:0001661)74765143992651439Rat
1358361Sradr5Stress Responsive Adrenal Weight QTL 55.55adrenal gland mass (VT:0010420)both adrenal glands wet weight (CMO:0000164)743747012108555253Rat
1357338Stl17Serum triglyceride level QTL 173.23blood triglyceride amount (VT:0002644)serum triglyceride level (CMO:0000360)769736356112729554Rat
631513Scl7Serum cholesterol level QTL 74.1blood cholesterol amount (VT:0000180)serum total cholesterol level (CMO:0000363)73796056982960569Rat
634331Pia17Pristane induced arthritis QTL 174.7joint integrity trait (VT:0010548)arthritic paw count (CMO:0001460)773829340130221005Rat

1 to 10 of 38 rows


Database
Acc Id
Source(s)
NCBI Gene 314915 UniSTS