Rspo2 (R-spondin 2) - Rat Genome Database

Name: Rspo2
Creator: Rat Genome Database
License: Creative Commons CC BY 4.0
Keywords: Rat Gene RGD Genome

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Gene: Rspo2 (R-spondin 2) Rattus norvegicus

Analyze

Symbol:

Rspo2

Name:

R-spondin 2

RGD ID:

1562331

Description:

Predicted to enable heparin binding activity and signaling receptor binding activity. Predicted to be involved in limb development and positive regulation of Wnt signaling pathway. Predicted to act upstream of or within several processes, including embryonic limb morphogenesis; negative regulation of odontogenesis of dentin-containing tooth; and respiratory system development. Predicted to be located in cell surface and extracellular region. Human ortholog(s) of this gene implicated in tetraamelia syndrome 2. Orthologous to human RSPO2 (R-spondin 2); PARTICIPATES IN Wnt signaling, canonical pathway; INTERACTS WITH 17beta-estradiol; 2,3,7,8-tetrachlorodibenzodioxine; 2,3,7,8-Tetrachlorodibenzofuran.

Type:

protein-coding

RefSeq Status:

PROVISIONAL

Previously known as:

LOC500863; R-spondin 2 homolog; R-spondin 2 homolog (Xenopus laevis); R-spondin-2; RGD1562331; similar to RIKEN cDNA 2610028F08

RGD Orthologs

Alliance Genes

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	RSPO2 (R-spondin 2)	HGNC	Ensembl, HomoloGene, Inparanoid, NCBI, OMA, OrthoDB
Mus musculus (house mouse):	Rspo2 (R-spondin 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	Rspo2 (R-spondin 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	RSPO2 (R-spondin 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	RSPO2 (R-spondin 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Rspo2 (R-spondin 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	RSPO2 (R-spondin 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	RSPO2 (R-spondin 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Rspo2 (R-spondin 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Alliance orthologs ³
Mus musculus (house mouse):	Rspo2 (R-spondin 2)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Homo sapiens (human):	RSPO2 (R-spondin 2)	Alliance	DIOPT (Ensembl Compara\|HGNC\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Danio rerio (zebrafish):	rspo2 (R-spondin 2)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Xenopus tropicalis (tropical clawed frog):	rspo2	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)

Latest Assembly:

mRatBN7.2 - mRatBN7.2 Assembly

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
mRatBN7.2	7	74,096,378 - 74,239,398 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	7	74,103,090 - 74,238,933 (-)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	7	76,004,762 - 76,090,437 (-)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	7	78,207,236 - 78,292,913 (-)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	7	78,075,318 - 78,160,987 (-)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	7	81,919,911 - 82,059,659 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	7	81,924,050 - 82,059,789 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	7	81,937,691 - 82,077,651 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	7	78,826,526 - 78,912,786 (-)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
Celera	7	71,160,894 - 71,246,191 (-)	NCBI		Celera
Cytogenetic Map	7	q31	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

genetic disease (ISO)

Humerofemoral Hypoplasia with Radiotibial Ray Deficiency (ISO)

tetraamelia syndrome 2 (ISO)

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

17beta-estradiol (EXP,ISO)

2,3,7,8-tetrachlorodibenzodioxine (EXP,ISO)

2,3,7,8-Tetrachlorodibenzofuran (EXP)

3,3',5,5'-tetrabromobisphenol A (ISO)

4,4'-sulfonyldiphenol (ISO)

6-propyl-2-thiouracil (ISO)

aflatoxin B1 (ISO)

arsenite(3-) (ISO)

arsenous acid (ISO)

benzo[a]pyrene (ISO)

bisphenol A (EXP,ISO)

bisphenol F (ISO)

Cuprizon (EXP)

cytarabine (ISO)

decabromodiphenyl ether (ISO)

diarsenic trioxide (ISO)

diiodine (ISO)

dorsomorphin (ISO)

entinostat (ISO)

ethanol (ISO)

fulvestrant (ISO)

iron dichloride (ISO)

malathion (ISO)

melphalan (ISO)

mercury dibromide (ISO)

methylmercury chloride (ISO)

ozone (ISO)

p-chloromercuribenzoic acid (ISO)

panobinostat (ISO)

paracetamol (EXP,ISO)

phenylmercury acetate (ISO)

resveratrol (ISO)

SB 431542 (ISO)

testosterone (EXP)

Tetrachlorobisphenol A (ISO)

trichloroethene (EXP)

trichostatin A (ISO)

valproic acid (ISO)

vorinostat (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

biological_process (ND)

bone mineralization (ISO)

canonical Wnt signaling pathway (ISO)

dopaminergic neuron differentiation (ISO)

embryonic forelimb morphogenesis (ISO)

embryonic hindlimb morphogenesis (ISO)

epithelial tube branching involved in lung morphogenesis (ISO)

limb development (ISO)

lung growth (ISO)

negative regulation of odontogenesis of dentin-containing tooth (ISO)

osteoblast differentiation (ISO)

positive regulation of canonical Wnt signaling pathway (ISO)

positive regulation of Wnt signaling pathway (ISO)

trachea cartilage morphogenesis (ISO)

Cellular Component

cell surface (ISO)

extracellular region (ISO)

Molecular Function

heparin binding (ISO)

protein binding (ISO)

signaling receptor binding (ISO)

Molecular Pathway Annotations Click to see Annotation Detail View

Wnt signaling, canonical pathway (ISO)

References

References - curated

#	Reference Title	Reference Citation
1.	Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium.	Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2.	The complex world of WNT receptor signalling.	Niehrs C Nat Rev Mol Cell Biol. 2012 Dec;13(12):767-79. doi: 10.1038/nrm3470. Epub 2012 Nov 15.
3.	ClinVar Automated Import and Annotation Pipeline	RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
4.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions
5.	Comprehensive gene review and curation	RGD comprehensive gene curation

Additional References at PubMed

PMID:9596525	PMID:16543246	PMID:18256198	PMID:19213727	PMID:22615920	PMID:24066094	PMID:24616052	PMID:25188337	PMID:29769720

Genomics

Comparative Map Data

Rspo2
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
mRatBN7.2	7	74,096,378 - 74,239,398 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	7	74,103,090 - 74,238,933 (-)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	7	76,004,762 - 76,090,437 (-)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	7	78,207,236 - 78,292,913 (-)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	7	78,075,318 - 78,160,987 (-)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	7	81,919,911 - 82,059,659 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	7	81,924,050 - 82,059,789 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	7	81,937,691 - 82,077,651 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	7	78,826,526 - 78,912,786 (-)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
Celera	7	71,160,894 - 71,246,191 (-)	NCBI		Celera
Cytogenetic Map	7	q31	NCBI

RSPO2
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	8	107,899,316 - 108,083,620 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	8	107,899,316 - 108,083,642 (-)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	8	108,911,544 - 109,095,848 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	8	108,980,721 - 109,164,742 (-)	NCBI	NCBI36	Build 36	hg18	NCBI36
Celera	8	105,098,134 - 105,283,118 (-)	NCBI		Celera
Cytogenetic Map	8	q23.1	NCBI
HuRef	8	104,233,209 - 104,418,017 (-)	NCBI		HuRef
CHM1_1	8	108,951,793 - 109,136,161 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	8	109,027,818 - 109,212,087 (-)	NCBI		T2T-CHM13v2.0

Rspo2
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	15	42,884,184 - 43,034,990 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	15	42,884,190 - 43,034,222 (-)	Ensembl		GRCm39 Ensembl
GRCm38	15	43,020,788 - 43,171,594 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	15	43,020,794 - 43,170,826 (-)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	15	42,852,341 - 43,002,364 (-)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	15	42,850,869 - 43,000,892 (-)	NCBI		MGSCv36	mm8
Celera	15	43,503,080 - 43,653,511 (-)	NCBI		Celera
Cytogenetic Map	15	B3.1	NCBI
cM Map	15	16.73	NCBI

Rspo2
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955417	30,643,554 - 30,704,497 (-)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955417	30,643,554 - 30,704,497 (-)	NCBI	ChiLan1.0	ChiLan1.0

RSPO2
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1	8	100,782,739 - 100,968,263 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	8	104,535,751 - 104,721,463 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	8	106,685,116 - 106,870,494 (-)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	8	106,685,116 - 106,870,494 (-)	Ensembl	panpan1.1		panPan2

RSPO2
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	13	8,610,227 - 8,755,727 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	13	8,611,952 - 8,754,859 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	13	8,550,551 - 8,728,117 (-)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	13	8,873,544 - 9,022,401 (-)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	13	8,874,544 - 9,021,570 (-)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	13	8,627,417 - 8,772,877 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	13	8,745,404 - 8,896,677 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	13	8,823,008 - 8,971,462 (-)	NCBI		UU_Cfam_GSD_1.0

Rspo2
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024405303	29,254,327 - 29,390,001 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936470	36,681,506 - 36,814,626 (+)	Ensembl	SpeTri2.0
SpeTri2.0	NW_004936470	36,680,716 - 36,815,347 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

RSPO2
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	4	29,414,752 - 29,579,674 (+)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	4	29,415,774 - 29,577,890 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	4	31,802,835 - 31,967,808 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

RSPO2
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	8	102,632,060 - 102,804,181 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	8	102,632,060 - 102,801,911 (-)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666039	37,778,158 - 37,953,383 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Rspo2
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624763	23,067,691 - 23,182,059 (-)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624763	23,067,682 - 23,182,945 (-)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants

Variants in Rspo2
830 total Variants

miRNA Target Status

Predicted Target Of

	Summary Value
Count of predictions:	551
Count of miRNA genes:	275
Interacting mature miRNAs:	364
Transcripts:	ENSRNOT00000067333
Prediction methods:	Microtar, Miranda, Rnahybrid, Targetscan
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (mRatBN7.2)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
634336	Anxrr17	Anxiety related response QTL 17	3.66		locomotor behavior trait (VT:0001392)	number of entries into a discrete space in an experimental apparatus (CMO:0000960)	7	924703	115097879	Rat
1643004	Pain2	Pain QTL 2	1		mechanical nociception trait (VT:0002734)	self mutilation severity score (CMO:0002145)	7	9462246	98011544	Rat
1300132	Bp182	Blood pressure QTL 182	3.49		arterial blood pressure trait (VT:2000000)	blood pressure time series experimental set point of the baroreceptor response (CMO:0002593)	7	19654317	84928080	Rat
10402855	Bp379	Blood pressure QTL 379		0.21	arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	7	29409683	74409683	Rat
1300127	Srn1	Serum renin concentration QTL 1	3.87		blood renin amount (VT:0003349)	plasma renin activity level (CMO:0000116)	7	29409683	84928080	Rat
10755453	Coatc12	Coat color QTL 12		0	coat/hair pigmentation trait (VT:0010463)	pigmented ventral coat/hair area to total ventral coat/hair area ratio (CMO:0001812)	7	31112832	76112832	Rat
7411605	Foco14	Food consumption QTL 14	24.1	0.001	eating behavior trait (VT:0001431)	feed conversion ratio (CMO:0001312)	7	34293282	79293282	Rat
631534	Lnnr1	Liver neoplastic nodule remodeling QTL 1	3.85	0.001	liver integrity trait (VT:0010547)	liver remodeling tumorous lesion number to liver total tumorous lesion number ratio (CMO:0001705)	7	34293282	79293282	Rat
631513	Scl7	Serum cholesterol level QTL 7	4.1		blood cholesterol amount (VT:0000180)	serum total cholesterol level (CMO:0000363)	7	37960569	82960569	Rat
61357	Bp38	Blood pressure QTL 38	1.6	0.052	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	7	41333674	119109060	Rat
634326	Hc3	Hypercalciuria QTL 3	2.1		urine calcium amount (VT:0002985)	urine calcium excretion rate (CMO:0000763)	7	42787314	87787314	Rat
10053722	Scort27	Serum corticosterone level QTL 27	2.41	0.0083	blood corticosterone amount (VT:0005345)	plasma corticosterone level (CMO:0001173)	7	43228750	88228750	Rat
1358361	Sradr5	Stress Responsive Adrenal Weight QTL 5	5.55		adrenal gland mass (VT:0010420)	both adrenal glands wet weight (CMO:0000164)	7	43747012	108555253	Rat
1300179	Kidm5	Kidney mass QTL 5	3.51		kidney mass (VT:0002707)	left kidney wet weight (CMO:0000083)	7	43747012	135012528	Rat
1300149	Cm6	Cardiac mass QTL 6	4.09		heart mass (VT:0007028)	heart left ventricle weight to body weight ratio (CMO:0000530)	7	43747099	102228765	Rat
631504	Cm27	Cardiac mass QTL 27	3.45		heart left ventricle mass (VT:0007031)	heart left ventricle wet weight (CMO:0000071)	7	44421311	118198041	Rat
61428	Scl3	Serum cholesterol level QTL 3	3.2		blood cholesterol amount (VT:0000180)	serum total cholesterol level (CMO:0000363)	7	44867533	89867533	Rat
738030	Anxrr8	Anxiety related response QTL 8	4.1		exploratory behavior trait (VT:0010471)	number of entries into a discrete space in an experimental apparatus (CMO:0000960)	7	46590070	91590070	Rat
2293696	Bmd32	Bone mineral density QTL 32	5.1	0.0001	femur strength trait (VT:0010010)	femoral neck polar moment of inertia (CMO:0001670)	7	47651439	92651439	Rat
2293707	Bss32	Bone structure and strength QTL 32	7.64	0.0001	femur strength trait (VT:0010010)	femur midshaft polar moment of inertia (CMO:0001669)	7	47651439	92651439	Rat
2300178	Bmd54	Bone mineral density QTL 54	5.3	0.0001	femur mineral mass (VT:0010011)	volumetric bone mineral density (CMO:0001553)	7	47651439	92651439	Rat
2293644	Bmd29	Bone mineral density QTL 29	5.4	0.0001	femur size trait (VT:1000369)	femoral neck cross-sectional area (CMO:0001697)	7	47651439	92651439	Rat
2293667	Bss42	Bone structure and strength QTL 42	7.25	0.0001	lumbar vertebra size trait (VT:0010518)	lumbar vertebra cross-sectional area (CMO:0001689)	7	47651439	92651439	Rat
2293678	Bss24	Bone structure and strength QTL 24	6.71	0.0001	femur morphology trait (VT:0000559)	femur cross-sectional area (CMO:0001661)	7	47651439	92651439	Rat
2293685	Bmd21	Bone mineral density QTL 21	4.2	0.0003	femur mineral mass (VT:0010011)	total volumetric bone mineral density (CMO:0001728)	7	47651439	92651439	Rat
1300151	Bp181	Blood pressure QTL 181	3.36		arterial blood pressure trait (VT:2000000)	diastolic blood pressure (CMO:0000005)	7	53612714	103945643	Rat
2317035	Aia16	Adjuvant induced arthritis QTL 16	2.71		joint integrity trait (VT:0010548)	right rear ankle joint diameter (CMO:0002150)	7	59238038	104238038	Rat
1298528	Bp169	Blood pressure QTL 169		0.0001	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	7	61074194	106074194	Rat
1559283	Emca4	Estrogen-induced mammary cancer QTL 4	3.7		mammary gland integrity trait (VT:0010552)	percentage of study population developing mammary tumors during a period of time (CMO:0000948)	7	62004452	101773158	Rat
1576303	Ept7	Estrogen-induced pituitary tumorigenesis QTL 7	3.7		pituitary gland mass (VT:0010496)	pituitary gland wet weight (CMO:0000853)	7	62004452	101773158	Rat
70173	Niddm19	Non-insulin dependent diabetes mellitus QTL 19	4.33	0.00005	blood glucose amount (VT:0000188)	blood glucose level area under curve (AUC) (CMO:0000350)	7	64002457	135012528	Rat
2316947	Rf58	Renal function QTL 58	7.8		kidney glomerulus morphology trait (VT:0005325)	index of glomerular damage (CMO:0001135)	7	68938720	113886318	Rat
2316952	Pur22	Proteinuria QTL 22	5.2		urine protein amount (VT:0005160)	urine protein level (CMO:0000591)	7	68938720	113886318	Rat
2316955	Stl24	Serum triglyceride level QTL 24	7.1		blood triglyceride amount (VT:0002644)	plasma triglyceride level (CMO:0000548)	7	68938720	113886318	Rat
631540	Bw9	Body weight QTL 9	4.5		body mass (VT:0001259)	body weight (CMO:0000012)	7	69736226	117455174	Rat
1357338	Stl17	Serum triglyceride level QTL 17	3.23		blood triglyceride amount (VT:0002644)	serum triglyceride level (CMO:0000360)	7	69736356	112729554	Rat
634331	Pia17	Pristane induced arthritis QTL 17	4.7		joint integrity trait (VT:0010548)	arthritic paw count (CMO:0001460)	7	73829340	130221005	Rat

Markers in Region

RH139502

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	7	74,102,610 - 74,102,824 (+)	MAPPER	mRatBN7.2
Rnor_6.0	7	81,924,151 - 81,924,364	NCBI	Rnor6.0
Rnor_5.0	7	81,941,931 - 81,942,144	UniSTS	Rnor5.0
RGSC_v3.4	7	78,774,610 - 78,774,823	UniSTS	RGSC3.4
Celera	7	71,110,007 - 71,110,220	UniSTS
RH 3.4 Map	7	523.0	UniSTS
Cytogenetic Map	7	q31	UniSTS

Expression

RNA-SEQ Expression

High: > 1000 TPM value Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM Below Cutoff: < 0.5 TPM

	alimentary part of gastrointestinal system	circulatory system	endocrine system	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	musculoskeletal system	nervous system	renal system	reproductive system	respiratory system	appendage
High
Medium									12		2
Low		6	4	4	1	4			62		25	11
Below cutoff	2	29	32	16	17	16	8	9		22	11		8

View RNA-SEQ Expression Data

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_001130575	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008765454	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008765455	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017595050	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039079749	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039079750	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AB232173	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CH473950	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JACYVU010000185	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

RefSeq Acc Id:

ENSRNOT00000067333 ⟹ ENSRNOP00000062362

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	7	74,153,444 - 74,238,803 (-)	Ensembl
Rnor_6.0 Ensembl	7	81,974,870 - 82,059,659 (-)	Ensembl

RefSeq Acc Id:

ENSRNOT00000082741 ⟹ ENSRNOP00000069239

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	7	74,103,090 - 74,238,933 (-)	Ensembl
Rnor_6.0 Ensembl	7	81,924,630 - 82,059,789 (-)	Ensembl

RefSeq Acc Id:

ENSRNOT00000087177 ⟹ ENSRNOP00000071706

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
Rnor_6.0 Ensembl	7	81,924,050 - 82,059,247 (-)	Ensembl

RefSeq Acc Id:

NM_001130575 ⟹ NP_001124047

RefSeq Status:

PROVISIONAL

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2	7	74,153,444 - 74,238,803 (-)	NCBI
Rnor_6.0	7	81,974,870 - 82,059,659 (-)	NCBI
Rnor_5.0	7	81,937,691 - 82,077,651 (-)	NCBI
RGSC_v3.4	7	78,826,526 - 78,912,786 (-)	RGD
Celera	7	71,160,894 - 71,246,191 (-)	RGD

Sequence:

show sequence

GCTTGTGTGCATCTCCATCGGAAAGTGCGCTGGCCACATCCCTTCGGCCTCCCGGGCAGTGTTC
TGTCTCCCCTAGCTCAAGCAGCGAGAAACTTCAGCTGTGAAGTGGTGGTGGAGAGAGCACTGGG
AGCAGCGACTGGACCCGGACGCCAAGAGAAGAGCGGACTCGCCCCTCGCCTGGAATCGCTCTCG
AAGGTGGAGACCCAGCATCCCAGCGCTTGCGGTTGTGCTTGCCCGGCCGCGCGCTTTTGCTACG
CGCCGCTAGCCCCGAAGACCCTTGGGGTCCGGGGACCCTTCTGCAGCCGGCGGATTCCCAAAGC
TGCCAAGAGCTCCGGGCGGGTGTCCGCAAACTTTTTCCGAGCCCACGTGCTGACCAAACAGCCC
GGCTCGCTTCCCGAGCCTGGGATGGAGCGCCGCGCCTAGGCACGCCGTGCAGCCCGAGACACGA
GCGCACGGTAGGCGATCCACACCTGGTGCCGCGGCTCTGGGATAGCCCGTCTGGGGAGCGAAGG
GCGTCAGAACGCCCCTTTAAAGCCCTGCGCGCGGCTGCTTCTAGAGCTCCTTCCCTTCCGCAGA
GCTCGCACAACGCCCTTTCCCCAGGGTCAGAAGCCACTGCTCGGCAGAGGTTGCTAATTCACTG
ATTGTAATCACCTTCCTCTCCAAGTCGCCTGCAGCTGTGTCATCTGCGTTAAACTGCTGCGTGG
GTCCTGCCAGTGAGTTCGCGTCCTCCCTCCCTCCTTTCTTTAAACCAAGAGGCGCGAAGGTGCA
GGTACCTCCTCCGGGTTCTCTCGGTCCTCCACCCACCCAGCTTCTCTTTTCCTCATCTCCCAGG
TTCACCGCGGAGGGAGAGATGCCCATCAAGCCAAATTGATCATTGCAGCCCCTGGGCAGTGGCA
TTTGTCTCTGAGTCCTCCCTAGGAGCGCGACCCGCACAGTCTCCTTGCAGGAGCCCAGCATTTC
CTCGACTTTTGAGAGGTGTCTCTCCCCAGCCCGACCGTCCAGATGCGTTTTTGCCTCTTCTCAT
TTGCTCTCATCATTCTGAACTGTATGGATTACAGCCAGTGCCAAGGCAACCGATGGAGACGCAG
TAAGCGAGCTAGTTATGTATCAAATCCCATTTGCAAGGGTTGTTTGTCTTGTTCGAAGGACAAT
GGCTGCAGCCGATGTCAGCAGAAGTTGTTCTTTTTCCTTCGGAGAGAAGGGATGCGCCAGTATG
GAGAGTGTCTGCATTCCTGCCCATCAGGGTACTATGGACACCGAGCCCCAGATATGAACAGATG
TGCAAGATGCAGAATAGAAAACTGTGATTCTTGCTTTAGCAAAGACTTTTGTACCAAGTGCAAA
GCAGGCTTTTATTTGCATAGAGGCCGCTGCTTTGATGAATGTCCAGAGGGTTTTGCACCACTAG
ATGAGACCATGGAGTGTGTAGAAGGTTGTGAAGTTGGTCATTGGAGCGAATGGGGAACGTGTAG
CAGAAACAACCGCACGTGTGGATTTAAATGGGGTCTGGAAACCAGAACACGGCAGATTGTTAAA
AAGCCAGCGAAAGACACAATACCATGTCCAACCATTGCAGAATCCAGGAGATGCAAGATGGCCA
TGAGGCACTGTCCAGGAGGTGGGTCTAAACAATCATGCTCATATGCTGCCTGCCTTCCGAAAGC
TCCCTCCTCCACACAATAAATGCTGTTTATCCATGATAGAAACCCGATACTAACATTGGACATG
AGATAAAATTCTACCTTTTTGTTTTAAGAAACAAATGCTTAAGTTGTGATTTATATACAGTGGA
CATTTCATTTGCTTTTATAATAGTTTTGAAATAATTTGAAGGAGTATCAATATGCTTTCAAACA
TGAGATTTATAAAAGTATGGGTTTGTGTGTGTGTGTGGTGTGTGTGTGTGTGTGTGTGTGTGTG
TGTGTGTGTTCTCAAATGTGCCATAATAAAGGCTTCTTGTGAAATTTGGCCTTTGCAGATGTTG
CTCAGGAGAAGGGGCCAACTTTCAGTTGAGAAGAGTTTAGATTAGAAAGGTTTATAGAATCTGT
AAAATTATCTGCATCATTACTAGTTGAATATGACAGCTTAAAATAAACTTACCCAAACACTGGG
AGGAAAAAACCCTGTGTTAATGTTACCACAATTAGCCCTTTCTCTTTGTTTTGATAATAATTTG
TAGAAAACAGCTACTGGTATGTGTGTGCTTAACTCTTTGTAATAATTATACTGATTTGCAGTCA
TTATTCTGTAATAGCCGGATTAGGCTCATTTGGAAACTAGGAGAGGAGTACTTAGTGAGGTGTT
AGACAATACAGAACCAGGAGGTCAAAATGCAGTTCTTGGGTACATGTGTTTGTGTGTTGTGATT
ACATGTGTGTTTGTGACATGGATGTGTATGTGTACATGTGTGTGCATGTGGAGACCAGATGACA
TTAGGCATTTCCCTTTATTGTTGTCAACCTTTTTAAGACATGGTCCCTTACTGACCTGGAACTC
ACTAATTTGACTAGACTGGTTGGCCAGTAAGGCCCTAGGACCCTGTGTCTCTGTGCATCTTACC
CAGGGGTGGAGTTATTGGCATACTTGACATGTATGTAGATGCTGGGTATATGAACTTTGGTCTT
CCTAACAGTGCAGCAAGCCTATTACAGACTGAACCATCTCACCAGTGTATTCATGTGGAATATG
CACAATATTCATGTGCTGCTTAAAGCAGTAATCACTTATTGACACTTACAGTATCACTGGCCAA
AGCCATATTGCCACAGAGGAAACCGAGATTTTTTTTTTAGGTGCACAGATTAAAAACAAAAAAA
AAAAGCAATAAGTAAGTTGTTTTTGGAAGAGCGACTTTAAAACAATCCAAACTTTTGTTTGCCC
TCTTCCCCCTCACTCACTGTTGCTGTGTAACTTCTCAACCTTTTAACTCAAGCCCAGAAAGAGA
CCACATAGTTACTTAAAGTGGGTTTGCATCCTCATTCTGCTGCCCCAGAGACAGTGTCTATGAT
CCATGGAGAAAGACGAGACTCTGAAGACTGGAAGACTCCGGCTGGCCTCTGAGGACTATTAGAT
CCAGATTCAGAAGCTCGTGTGGAGGAGCCAGCTTTTCCTCTTAAATTAGTCTTGCTTTTCCTTA
CTGGGCCTTTGAAACAAATTTTCTTTGGGGGTCTGCTTTTCACTAACAAGGATGGTTTTGTTCA
CTTTAAGTGGGTATTTTTCAGTC

hide sequence

RefSeq Acc Id:

XM_008765454 ⟹ XP_008763676

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2	7	74,096,378 - 74,239,398 (-)	NCBI
Rnor_6.0	7	81,919,911 - 82,058,671 (-)	NCBI

Sequence:

show sequence

GCCCGACCGTCCAGATGCGTTTTTGCCTCTTCTCATTTGCTCTCATCATTCTGAACTGTATGGA
TTACAGCCAGTGCCAAGGCAACCGATGGAGACGCAGTAAGCGAGGTGGGTCGCGCTCGCCTGAA
GCTAGTTATGTATCAAATCCCATTTGCAAGGGTTGTTTGTCTTGTTCGAAGGACAATGGCTGCA
GCCGATGTCAGCAGAAGTTGTTCTTTTTCCTTCGGAGAGAAGGGATGCGCCAGTATGGAGAGTG
TCTGCATTCCTGCCCATCAGGGTACTATGGACACCGAGCCCCAGATATGAACAGATGTGCAAGA
TGCAGAATAGAAAACTGTGATTCTTGCTTTAGCAAAGACTTTTGTACCAAGTGCAAAGCAGGCT
TTTATTTGCATAGAGGCCGCTGCTTTGATGAATGTCCAGAGGGTTTTGCACCACTAGATGAGAC
CATGGAGTGTGTAGAAGGTTGTGAAGTTGGTCATTGGAGCGAATGGGGAACGTGTAGCAGAAAC
AACCGCACGTGTGGATTTAAATGGGGTCTGGAAACCAGAACACGGCAGATTGTTAAAAAGCCAG
CGAAAGACACAATACCATGTCCAACCATTGCAGAATCCAGGAGATGCAAGATGGCCATGAGGCA
CTGTCCAGGAGGGAAGAGAACACCAAAGGCCAAAGAGAAGAGAAACAAGAAGAAGAGACGGAAG
CTGATTGAGAGAGCCCAAGAACAGCACAGCGTCTTCCTTGCTACAGACAGAGTGAATCAATAAA
ATACAAGAAATAGCTAGGGCATTTGGAGGTTTTCTGTTTTGTTTTGTTGTTGTTTTGCAAAAGT
GCACAAAGCTACTCTCCGATCCACACTGGTGGACAGCATTCCTGATCCTCCGACCAGTATCCAT
TTCCAGTAATGTTGCAAAGGGAGGTGCCCGAGCACAGACTCTGGGTTATTTATGTTTTGATTAG
AATTTGGAGCCTGTGATGGCAGGAGCTTGTTGAGTTGAATCAGTGGGAACTGATGTGTCTGTAC
TCTTATGATGAGCACAGTTTGTCATAAGACCCTGTCGCTGGCATGGCGGACCTGCGGGAGGCAC
GAGGCTGTAGATCACCATTGGAGAATGCACCTGTGCCTACTTCTGTGGATGACAGTGCTAAGCG
AGCAAGCACTGTTCACTTGTGACTTTTATTTCCCACACCATGCATTGTCAAAGACAAATGAGCA
TGGAAAAGGTGTTTAGTGTCACCTCACAGTGTTCTCAGCATCAGTGATCTTCAGATGGTCCTAC
GATGAGACTGCTTCCTAGCTAGGGTATGCTGTGGAAATTCCTGCTACATTTCATCCTAGTGCTA
ACATGTACAGATTCTGCTGAGCTATATTCGAAGCTCCTTACTGTATATTTATGCTTTCTGCGTG
AAACAAGTTATACCTGATTGCTAAGATGTCACTTTGTTTCTAGTGGTTCTTAACCATGGTCTGG
TACATGGCTGTTCTAGTCTTGAAAATTGACAAGTGTTTTGTTGCCTCTTGTTTTCTTTTGTTCC
TATTATTTTGGAGGGGGTGGGGTGGGCTTGTTTCTAATTGTAAGTATAGGATAAGCCAGTTTGT
ATATAGAGTCAAATGAGTGATATCAGAGTTTCAGTGCTGATAGAACTTCCCCAGTTCGTGTCAC
CACACACAGAGAGAAAAAGCAGCATGCAGCATCTGGCCATCAGAAGTCAAACTCCTTTTGAGTC
CAAAAATTGGTGACTTATGAAATACAGCTGAAAAGAAGAAGATTTATGTGCAGTTGCTTGTATT
TATTACACAATCAATTTTCCAATTACATTTTTTTTCAAACTCAAAATAATCCATGACTTTGAAC
AATAAATCACCTGGCCATATTCTTGGGTCACTGGGGAAGCTGCTGTCATGAAACCACTCAGAAA
ATGAAAGAGAAAATAGGATGGATTCCCCCAAGTGAGAGTCACAGCTTAATATCTCAGTTGAGTC
GAGATCAACTACATTAGAACCGAGAACATGTTGGAAGCTTTCCAGTTGACTCACGTGGTCATGG
TTTCAGAAATATCTCTGTCCCCTAGGCTCAGTTGGTCCTTAGACCTATGAATTGGCAAGTTCTA
AATGCATTATTCTCCTGGATGATCAAGGAGAAAATTAGAACAAAGTTGTATAGTTTTGAGAAAA
CATCCAAAGCAAGACAAAGCCTTTCCTTGCCTTGCCTTGGCAAAACTACCTCTTTAGCATTTCT
GTTGATTCAGAAACATCTTGCTGTTATGTATAGATGTCTTAAGCTTCATTATGAAAATACTGAT
GCAAGATAAGCCATATCTGAATGTTGAATTCAACTTTAGGGCTTGAACGTAATCCTAAAGTGTT
CACCTCTCTCTCTCTCCATGCCTCCTTACATTCTATTCCTATTTACTAAGTGGGTAGGGGTCTC
CTTAATATCATACTTCATTGTTAATAAGTCAATGCTTGTTATGTTTCTGGGCTGTTTTGTGCAT
TAAAATCTCAAAAATTGTTTTTTAGACTGTTTTTCTTTGGCTTTAACAGTACACTCAAGGGAAG
TGCATTACATTCTTTACCAACACTAGTGCCTACTAGTGAGTGATCAAAAACATGAGAGATTATG
TTGATATCAGTGTTTATGATATTCATTTATGTAAAATATTATTGCATAGTAGTTGAAAGTGGGA
TTTTTCAGAACTATGTTTCTTAAGTTCCAATCTAGGCTAAGAAACCTAAGACAAATTGCTTTAT
CTCTGTGAGTTCTTATCTATCTATAGGGCTGTATTTTAGGGGCTATATTAGTTAAGACATGTGC
TATAGTTCTCTGTACCCACAGGTTCTAATGGGCTCTACTCAACTGTGCATCACAAATATTTTAA
AAATATTGCATCCATCCATACTGAACATATGCTTTTTGTCATTCCTTCGTCATTCCCTACATGT
AATGTATTTAGAAACATGAAATAATTTTTAGTGTATGAGGAATTTGTACACATATATTTGAAAA
ACTATAACACCAGCTTTGGATTATGACCATCTTTCGATTGTGGTGTTTGCAGGACCTCATGGAA
ATAATGTCATGATGAAACCAAGACATCCTAGTATACAGACTTTTAGTTAAGACCTGGGATAATA
TATATGTATGAACTGTGGTCGCTATAGCAGATTGCCAAATCCTACACAAATTAGTACCTATTAT
TTCTTCCATTGGCTATTTTATATTTTCCCCAAGACATTCTATTAACAAAATAGAATTTAAAATT
GTTCAGTGGTAGAGAATTTTGCTGGCATCCATTATCCTAGGTCCCATCTTTAATACTGCAAAAA
AAGATGAGTAAACATTTATGGAAGTATCAGACAACTTCAATCTATTGATTAATTTCTAGTCATT
AACTTTATTCTTATTGGGATTTGCTTATACCCTCTTATTTCCGAGGAGTACGTGTATAAATCTA
AAACTGAATTCAGGACTGTTTCTCAGTTGGGGTGAAGTCAAGGAAATCAAACCAGGCATTTCAA
ATGCACTCTAATATCAAGAATATATTAATTACACTGGTAGTAAATAAGCCATGAAGTCATGTGT
GTTACCAAAATAAGCCAGAGTGGAGCTATAGCAGGAAGCTACTATCATGATTCGGGGTAGGAGG
AAGGATTGCAGGGAAAGGTGGAATTTCCAAGATGTAATTATCAAGCTATTACCTTAAGCTAAAG
CTATAGTTGAGAATAGAGTTATAACCACAGGTCATTGAGACCAAGAACAGAACTCATATCAAGG
GGAATTGAAATCTTAGACACAAGAGAGGGTCAGTGTCAGGTCTTTAGGGACTGTGTTTAATGTG
CACTTGTTTAGTGTCTTAATTGATACTTTTGGAATATAAAGACAAACATGAATTTAAAAGTAGG
TGATTCACACCTTAAAGCAGAATAATGAGTTAGCTAGTCAGGGCAATGTATACGGAATAATTAT
TTAAGCAGATTGCAATACGACTATGAGGAATCACATTAGCAGACTACCACATGCCTTCTCCTCC
AGCGTCAGCAAATGTTGTCGATCATATTCTTGACTTCTGATAAAAATACCTAGAATCCCAAAGT
GGAGTTCCAGGGAAATACTTCTAAAATTCTGACATGAATAGAGGATTAATAATGTCTAGCTTTT
CTCATACATGTTAATGTCCAGAAGAGAAACTTTTATCTTCTTCCAGAAAATATTTTTTTTAAAA
ATGGCTGTATAAGTGTTTTTCCATATTTATGCTTCTGAGGCTCAGAACTTCTTAAGCAGGCCTC
CAAAATGGTAGTATGTTTTATTTTTTGATAGCTTGGTGTCCACTTATGTCTTATGACAAGAAGT
TGAGTATGGACTATATTTTTTAAGAGTAAAGTCTTGTAGACAATACTTGCAGCATGCTTTTTCT
CTGGTTAGCTTGTTCCATGTGCTTCAGATTGAAGTTTGTTATCATTATGAGTTTCTCTATGGTG
GAGACAGTAGACCATATGTCAGTGGCAGGAAGGAACCTGACAGGTATATTTTGACATAAAGCCT
TATGACAAACATTTGAAATCTTGGAAAGAGGAGCCAAGGCACTAGAAAGCAAGAACAGGATCAG
GAGGGTTGAAGAAAAGACAACCAGGAAGAGATGCTAAAGTGCTGTCTGAAAGGTAGAACCAAGA
GCGGTCAGGGAGAAATGAAGACCCATGAAGGCTGTAGAGAAAACTCAGATTTTGTTATATATGG
TGGGCAGAAAAAAATTACTGGATTTTTGTCCTGCTTAAGCAGAAGAGAGATGTGCTCTAATTTC
TGTACACTGTTCACTAAGTCATCTGTGCAGAAGGTATATTTTAAGAGAAAAAAGCAAAGAGATG
AATTAAGTTATTGCACTACCCTGGTGAGAATGCATATGACATTGGTTAGTGAACAATATTAAAA
GGAAGAGGGATCTAGGACCCTTGGGAGTTAGATATGAAATAAAGGAACAAATGGAGCCTAAGGT
ATAATCTAGGTCTTTTGTTCTGAGTAAGAATATTTGGGGGACAGAACTGGCAAATGATTACAGT
TTTCATATGCTAAGCATGAAGTGGTGTTAGGTAGCTAAGTAAAAACAGCAAGAAGGCAATTGCT
TATAATTATGGACTTCAGGGAAAAGGTCAAAGCCAGATTATAATTGGGGGCTATATTGGGATAT
TGCTTGTTCTTTGAATCGTAGGCCTTAATGTGATGGCCCAGAAAGAGTACAGATGGGAGAAGAA
AGACTTTGGACATTCAAATATTCATTATCAACCAGAGGATGGTATGGAAGTAAAGAGAAATAGA
GAGGACCACCAGAAGCAGATAATAGTAGTGACCAAGAAGAATTGCACTTGAAATTGCAATGCAC
ACTTTTAATCCCAGCATTAACAAATTTAGGAGTCTGAGGCAAGGGGATCAGGAGTTTAAGGATA
GTCTCAGTTAAATGAGACCTGTCCAGGCTACAGAGACATAGCTTTAAAACAGGTTGGAGTTCTA
GGCTTTATGTAGTTCCCTTTCCCTCTGTAATACAATAAAAATAATGAGAGGAGTAAGGACAATT
AGAAAAATTGTAATAATTAAAGGTTGTTGTCTCCTCAATTTTATTTCTGAACCATATACTCCAA
GAGTGAAATTTACACATAACTTACAATCTGTTGAAAGTGGTTTTGATATAGAACAAAAATATGT
CAATGCTTAAAACACTTGGAAACTACTCTTCACATAAATGTGATAATGATACTTAATTTCAGGT
TACCATACCATCTACCAATTTCATTTACATTTATGATGAAATAATTATCTCAATGACCCTGCAA
GGATTTTTCTTTTATTGCTTTCAAAATCAATAAAATGTATCAATTGAGCTACAAAACAAGCATT
CTGTGAATTAGAGGTCCTTGAGTTTGTAATTTTCAGAATTGAGGATTTTTCAAACTTGTAATTA
TTGAGTTGCTTTGGTAGCAGCCTTCTGATGTGAGCGCATACATGTCTGAACAGAATTAGGCAAT
CACATGCACACAATCATAGTATTTAACTAAAGAGCAAGATTGTGGTAAAAATACTTATTTTTTC
CATGCATTTCTGTGTAAAGTAGAACAAATGAGATCTTTAATTACTTACATTTCAAATTTAAGTT
AGATAAATGTGTGCTGATAGTTTCCCCATTATACATGCCTCCCCTGGGTATAGTCTCACTTACA
TGTGATACCTGGATAAGTGTAGTAAAACCTGGTAGAACTGACCCTCTCCTTTTTGAGCAATGAG
TAACATTCTATTCCCCAGTTCTCTTGTAGATAGATGGTCCTTGTGCTTGACTTAAATCCATGGG
GTTTCAGAGAAATGGTATATATCCATTTGAGATCCAGCTTTTCTAATAGTAGCAGGTGCACCTT
TTGCATGATGTTTGTGCCTTAAGCACAAAGACATGTCCATGGAGTAAACGAAACCTGTCTTTCA
GTTACTGTATGGAAGAGAGTTGGCTCAAATACTGGCCCAAGCTATACATGTAAATATCAATATT
TGTTATGTTGAGCTTTAATGATCCTTTGTTACTCTTGACCTTGAGTCAACACCTTCATCATGGA
CTTCAGAATGGTGAGAAATACATACCTGTTCTTTAAGCCACA

hide sequence

RefSeq Acc Id:

XM_008765455 ⟹ XP_008763677

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2	7	74,096,378 - 74,239,398 (-)	NCBI
Rnor_6.0	7	81,919,911 - 82,059,659 (-)	NCBI

Sequence:

show sequence

GCTTGTGTGCATCTCCATCGGAAAGTGCGCTGGCCACATCCCTTCGGCCTCCCGGGCAGTGTTC
TGTCTCCCCTAGCTCAAGCAGCGAGAAACTTCAGCTGTGAAGTGGTGGTGGAGAGAGCACTGGG
AGCAGCGACTGGACCCGGACGCCAAGAGAAGAGCGGACTCGCCCCTCGCCTGGAATCGCTCTCG
AAGGTGGAGACCCAGCATCCCAGCGCTTGCGGTTGTGCTTGCCCGGCCGCGCGCTTTTGCTACG
CGCCGCTAGCCCCGAAGACCCTTGGGGTCCGGGGACCCTTCTGCAGCCGGCGGATTCCCAAAGC
TGCCAAGAGCTCCGGGCGGGTGTCCGCAAACTTTTTCCGAGCCCACGTGCTGACCAAACAGCCC
GGCTCGCTTCCCGAGCCTGGGATGGAGCGCCGCGCCTAGGCACGCCGTGCAGCCCGAGACACGA
GCGCACGGTAGGCGATCCACACCTGGTGCCGCGGCTCTGGGATAGCCCGTCTGGGGAGCGAAGG
GCGTCAGAACGCCCCTTTAAAGCCCTGCGCGCGGCTGCTTCTAGAGCTCCTTCCCTTCCGCAGA
GCTCGCACAACGCCCTTTCCCCAGGGTCAGAAGCCACTGCTCGGCAGAGGTTGCTAATTCACTG
ATTGTAATCACCTTCCTCTCCAAGTCGCCTGCAGCTGTGTCATCTGCGTTAAACTGCTGCGTGG
GTCCTGCCAGTGAGTTCGCGTCCTCCCTCCCTCCTTTCTTTAAACCAAGAGGCGCGAAGGTGCA
GGTACCTCCTCCGGGTTCTCTCGGTCCTCCACCCACCCAGCTTCTCTTTTCCTCATCTCCCAGG
TTCACCGCGGAGGGAGAGATGCCCATCAAGCCAAATTGATCATTGCAGCCCCTGGGCAGTGGCA
TTTGTCTCTGAGTCCTCCCTAGGAGCGCGACCCGCACAGTCTCCTTGCAGGAGCCCAGCATTTC
CTCGACTTTTGAGAGGTGTCTCTCCCCAGCCCGACCGTCCAGATGCGTTTTTGCCTCTTCTCAT
TTGCTCTCATCATTCTGAACTGTATGGATTACAGCCAGTGCCAAGGCAACCGATGGAGACGCAG
TAAGCGAGCTAGTTATGTATCAAATCCCATTTGCAAGGGTTGTTTGTCTTGTTCGAAGGACAAT
GGCTGCAGCCGATGTCAGCAGAAGTTGTTCTTTTTCCTTCGGAGAGAAGGGATGCGCCAGTATG
GAGAGTGTCTGCATTCCTGCCCATCAGGGTACTATGGACACCGAGCCCCAGATATGAACAGATG
TGCAAGATGCAGAATAGAAAACTGTGATTCTTGCTTTAGCAAAGACTTTTGTACCAAGTGCAAA
GCAGGCTTTTATTTGCATAGAGGCCGCTGCTTTGATGAATGTCCAGAGGGTTTTGCACCACTAG
ATGAGACCATGGAGTGTGTAGAAGGTTGTGAAGTTGGTCATTGGAGCGAATGGGGAACGTGTAG
CAGAAACAACCGCACGTGTGGATTTAAATGGGGTCTGGAAACCAGAACACGGCAGATTGTTAAA
AAGCCAGCGAAAGACACAATACCATGTCCAACCATTGCAGAATCCAGGAGATGCAAGATGGCCA
TGAGGCACTGTCCAGGAGGGAAGAGAACACCAAAGGCCAAAGAGAAGAGAAACAAGAAGAAGAG
ACGGAAGCTGATTGAGAGAGCCCAAGAACAGCACAGCGTCTTCCTTGCTACAGACAGAGTGAAT
CAATAAAATACAAGAAATAGCTAGGGCATTTGGAGGTTTTCTGTTTTGTTTTGTTGTTGTTTTG
CAAAAGTGCACAAAGCTACTCTCCGATCCACACTGGTGGACAGCATTCCTGATCCTCCGACCAG
TATCCATTTCCAGTAATGTTGCAAAGGGAGGTGCCCGAGCACAGACTCTGGGTTATTTATGTTT
TGATTAGAATTTGGAGCCTGTGATGGCAGGAGCTTGTTGAGTTGAATCAGTGGGAACTGATGTG
TCTGTACTCTTATGATGAGCACAGTTTGTCATAAGACCCTGTCGCTGGCATGGCGGACCTGCGG
GAGGCACGAGGCTGTAGATCACCATTGGAGAATGCACCTGTGCCTACTTCTGTGGATGACAGTG
CTAAGCGAGCAAGCACTGTTCACTTGTGACTTTTATTTCCCACACCATGCATTGTCAAAGACAA
ATGAGCATGGAAAAGGTGTTTAGTGTCACCTCACAGTGTTCTCAGCATCAGTGATCTTCAGATG
GTCCTACGATGAGACTGCTTCCTAGCTAGGGTATGCTGTGGAAATTCCTGCTACATTTCATCCT
AGTGCTAACATGTACAGATTCTGCTGAGCTATATTCGAAGCTCCTTACTGTATATTTATGCTTT
CTGCGTGAAACAAGTTATACCTGATTGCTAAGATGTCACTTTGTTTCTAGTGGTTCTTAACCAT
GGTCTGGTACATGGCTGTTCTAGTCTTGAAAATTGACAAGTGTTTTGTTGCCTCTTGTTTTCTT
TTGTTCCTATTATTTTGGAGGGGGTGGGGTGGGCTTGTTTCTAATTGTAAGTATAGGATAAGCC
AGTTTGTATATAGAGTCAAATGAGTGATATCAGAGTTTCAGTGCTGATAGAACTTCCCCAGTTC
GTGTCACCACACACAGAGAGAAAAAGCAGCATGCAGCATCTGGCCATCAGAAGTCAAACTCCTT
TTGAGTCCAAAAATTGGTGACTTATGAAATACAGCTGAAAAGAAGAAGATTTATGTGCAGTTGC
TTGTATTTATTACACAATCAATTTTCCAATTACATTTTTTTTCAAACTCAAAATAATCCATGAC
TTTGAACAATAAATCACCTGGCCATATTCTTGGGTCACTGGGGAAGCTGCTGTCATGAAACCAC
TCAGAAAATGAAAGAGAAAATAGGATGGATTCCCCCAAGTGAGAGTCACAGCTTAATATCTCAG
TTGAGTCGAGATCAACTACATTAGAACCGAGAACATGTTGGAAGCTTTCCAGTTGACTCACGTG
GTCATGGTTTCAGAAATATCTCTGTCCCCTAGGCTCAGTTGGTCCTTAGACCTATGAATTGGCA
AGTTCTAAATGCATTATTCTCCTGGATGATCAAGGAGAAAATTAGAACAAAGTTGTATAGTTTT
GAGAAAACATCCAAAGCAAGACAAAGCCTTTCCTTGCCTTGCCTTGGCAAAACTACCTCTTTAG
CATTTCTGTTGATTCAGAAACATCTTGCTGTTATGTATAGATGTCTTAAGCTTCATTATGAAAA
TACTGATGCAAGATAAGCCATATCTGAATGTTGAATTCAACTTTAGGGCTTGAACGTAATCCTA
AAGTGTTCACCTCTCTCTCTCTCCATGCCTCCTTACATTCTATTCCTATTTACTAAGTGGGTAG
GGGTCTCCTTAATATCATACTTCATTGTTAATAAGTCAATGCTTGTTATGTTTCTGGGCTGTTT
TGTGCATTAAAATCTCAAAAATTGTTTTTTAGACTGTTTTTCTTTGGCTTTAACAGTACACTCA
AGGGAAGTGCATTACATTCTTTACCAACACTAGTGCCTACTAGTGAGTGATCAAAAACATGAGA
GATTATGTTGATATCAGTGTTTATGATATTCATTTATGTAAAATATTATTGCATAGTAGTTGAA
AGTGGGATTTTTCAGAACTATGTTTCTTAAGTTCCAATCTAGGCTAAGAAACCTAAGACAAATT
GCTTTATCTCTGTGAGTTCTTATCTATCTATAGGGCTGTATTTTAGGGGCTATATTAGTTAAGA
CATGTGCTATAGTTCTCTGTACCCACAGGTTCTAATGGGCTCTACTCAACTGTGCATCACAAAT
ATTTTAAAAATATTGCATCCATCCATACTGAACATATGCTTTTTGTCATTCCTTCGTCATTCCC
TACATGTAATGTATTTAGAAACATGAAATAATTTTTAGTGTATGAGGAATTTGTACACATATAT
TTGAAAAACTATAACACCAGCTTTGGATTATGACCATCTTTCGATTGTGGTGTTTGCAGGACCT
CATGGAAATAATGTCATGATGAAACCAAGACATCCTAGTATACAGACTTTTAGTTAAGACCTGG
GATAATATATATGTATGAACTGTGGTCGCTATAGCAGATTGCCAAATCCTACACAAATTAGTAC
CTATTATTTCTTCCATTGGCTATTTTATATTTTCCCCAAGACATTCTATTAACAAAATAGAATT
TAAAATTGTTCAGTGGTAGAGAATTTTGCTGGCATCCATTATCCTAGGTCCCATCTTTAATACT
GCAAAAAAAGATGAGTAAACATTTATGGAAGTATCAGACAACTTCAATCTATTGATTAATTTCT
AGTCATTAACTTTATTCTTATTGGGATTTGCTTATACCCTCTTATTTCCGAGGAGTACGTGTAT
AAATCTAAAACTGAATTCAGGACTGTTTCTCAGTTGGGGTGAAGTCAAGGAAATCAAACCAGGC
ATTTCAAATGCACTCTAATATCAAGAATATATTAATTACACTGGTAGTAAATAAGCCATGAAGT
CATGTGTGTTACCAAAATAAGCCAGAGTGGAGCTATAGCAGGAAGCTACTATCATGATTCGGGG
TAGGAGGAAGGATTGCAGGGAAAGGTGGAATTTCCAAGATGTAATTATCAAGCTATTACCTTAA
GCTAAAGCTATAGTTGAGAATAGAGTTATAACCACAGGTCATTGAGACCAAGAACAGAACTCAT
ATCAAGGGGAATTGAAATCTTAGACACAAGAGAGGGTCAGTGTCAGGTCTTTAGGGACTGTGTT
TAATGTGCACTTGTTTAGTGTCTTAATTGATACTTTTGGAATATAAAGACAAACATGAATTTAA
AAGTAGGTGATTCACACCTTAAAGCAGAATAATGAGTTAGCTAGTCAGGGCAATGTATACGGAA
TAATTATTTAAGCAGATTGCAATACGACTATGAGGAATCACATTAGCAGACTACCACATGCCTT
CTCCTCCAGCGTCAGCAAATGTTGTCGATCATATTCTTGACTTCTGATAAAAATACCTAGAATC
CCAAAGTGGAGTTCCAGGGAAATACTTCTAAAATTCTGACATGAATAGAGGATTAATAATGTCT
AGCTTTTCTCATACATGTTAATGTCCAGAAGAGAAACTTTTATCTTCTTCCAGAAAATATTTTT
TTTAAAAATGGCTGTATAAGTGTTTTTCCATATTTATGCTTCTGAGGCTCAGAACTTCTTAAGC
AGGCCTCCAAAATGGTAGTATGTTTTATTTTTTGATAGCTTGGTGTCCACTTATGTCTTATGAC
AAGAAGTTGAGTATGGACTATATTTTTTAAGAGTAAAGTCTTGTAGACAATACTTGCAGCATGC
TTTTTCTCTGGTTAGCTTGTTCCATGTGCTTCAGATTGAAGTTTGTTATCATTATGAGTTTCTC
TATGGTGGAGACAGTAGACCATATGTCAGTGGCAGGAAGGAACCTGACAGGTATATTTTGACAT
AAAGCCTTATGACAAACATTTGAAATCTTGGAAAGAGGAGCCAAGGCACTAGAAAGCAAGAACA
GGATCAGGAGGGTTGAAGAAAAGACAACCAGGAAGAGATGCTAAAGTGCTGTCTGAAAGGTAGA
ACCAAGAGCGGTCAGGGAGAAATGAAGACCCATGAAGGCTGTAGAGAAAACTCAGATTTTGTTA
TATATGGTGGGCAGAAAAAAATTACTGGATTTTTGTCCTGCTTAAGCAGAAGAGAGATGTGCTC
TAATTTCTGTACACTGTTCACTAAGTCATCTGTGCAGAAGGTATATTTTAAGAGAAAAAAGCAA
AGAGATGAATTAAGTTATTGCACTACCCTGGTGAGAATGCATATGACATTGGTTAGTGAACAAT
ATTAAAAGGAAGAGGGATCTAGGACCCTTGGGAGTTAGATATGAAATAAAGGAACAAATGGAGC
CTAAGGTATAATCTAGGTCTTTTGTTCTGAGTAAGAATATTTGGGGGACAGAACTGGCAAATGA
TTACAGTTTTCATATGCTAAGCATGAAGTGGTGTTAGGTAGCTAAGTAAAAACAGCAAGAAGGC
AATTGCTTATAATTATGGACTTCAGGGAAAAGGTCAAAGCCAGATTATAATTGGGGGCTATATT
GGGATATTGCTTGTTCTTTGAATCGTAGGCCTTAATGTGATGGCCCAGAAAGAGTACAGATGGG
AGAAGAAAGACTTTGGACATTCAAATATTCATTATCAACCAGAGGATGGTATGGAAGTAAAGAG
AAATAGAGAGGACCACCAGAAGCAGATAATAGTAGTGACCAAGAAGAATTGCACTTGAAATTGC
AATGCACACTTTTAATCCCAGCATTAACAAATTTAGGAGTCTGAGGCAAGGGGATCAGGAGTTT
AAGGATAGTCTCAGTTAAATGAGACCTGTCCAGGCTACAGAGACATAGCTTTAAAACAGGTTGG
AGTTCTAGGCTTTATGTAGTTCCCTTTCCCTCTGTAATACAATAAAAATAATGAGAGGAGTAAG
GACAATTAGAAAAATTGTAATAATTAAAGGTTGTTGTCTCCTCAATTTTATTTCTGAACCATAT
ACTCCAAGAGTGAAATTTACACATAACTTACAATCTGTTGAAAGTGGTTTTGATATAGAACAAA
AATATGTCAATGCTTAAAACACTTGGAAACTACTCTTCACATAAATGTGATAATGATACTTAAT
TTCAGGTTACCATACCATCTACCAATTTCATTTACATTTATGATGAAATAATTATCTCAATGAC
CCTGCAAGGATTTTTCTTTTATTGCTTTCAAAATCAATAAAATGTATCAATTGAGCTACAAAAC
AAGCATTCTGTGAATTAGAGGTCCTTGAGTTTGTAATTTTCAGAATTGAGGATTTTTCAAACTT
GTAATTATTGAGTTGCTTTGGTAGCAGCCTTCTGATGTGAGCGCATACATGTCTGAACAGAATT
AGGCAATCACATGCACACAATCATAGTATTTAACTAAAGAGCAAGATTGTGGTAAAAATACTTA
TTTTTTCCATGCATTTCTGTGTAAAGTAGAACAAATGAGATCTTTAATTACTTACATTTCAAAT
TTAAGTTAGATAAATGTGTGCTGATAGTTTCCCCATTATACATGCCTCCCCTGGGTATAGTCTC
ACTTACATGTGATACCTGGATAAGTGTAGTAAAACCTGGTAGAACTGACCCTCTCCTTTTTGAG
CAATGAGTAACATTCTATTCCCCAGTTCTCTTGTAGATAGATGGTCCTTGTGCTTGACTTAAAT
CCATGGGGTTTCAGAGAAATGGTATATATCCATTTGAGATCCAGCTTTTCTAATAGTAGCAGGT
GCACCTTTTGCATGATGTTTGTGCCTTAAGCACAAAGACATGTCCATGGAGTAAACGAAACCTG
TCTTTCAGTTACTGTATGGAAGAGAGTTGGCTCAAATACTGGCCCAAGCTATACATGTAAATAT
CAATATTTGTTATGTTGAGCTTTAATGATCCTTTGTTACTCTTGACCTTGAGTCAACACCTTCA
TCATGGACTTCAGAATGGTGAGAAATACATACCTGTTCTTTAAGCCACA

hide sequence

RefSeq Acc Id:

XM_017595050 ⟹ XP_017450539

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2	7	74,096,378 - 74,239,398 (-)	NCBI
Rnor_6.0	7	81,919,911 - 82,058,671 (-)	NCBI

Sequence:

show sequence

GCCCGACCGTCCAGATGCGTTTTTGCCTCTTCTCATTTGCTCTCATCATTCTGAACTGTATGGA
TTACAGCCAGTGCCAAGGCAACCGATGGAGACGCAGTAAGCGAGGTGGGTCGCGCTCGCCTGAA
GCTAGTTATGTATCAAATCCCATTTGCAAGGGTTGTTTGTCTTGTTCGAAGGACAATGGCTGCA
GCCGATGTCAGCAGAAGTTGTTCTTTTTCCTTCGGAGAGAAGGGATGCGCCAGTATGGAGAGTG
TCTGCATTCCTGCCCATCAGGGTACTATGGACACCGAGCCCCAGATATGAACAGATGTGCAAGA
TGCAGAATAGAAAACTGTGATTCTTGCTTTAGCAAAGACTTTTGTACCAAGTGCAAAGCAGGCT
TTTATTTGCATAGAGGCCGCTGCTTTGATGAATGTCCAGAGGGTTTTGCACCACTAGATGAGAC
CATGGAGTGTGTAGGTTGTGAAGTTGGTCATTGGAGCGAATGGGGAACGTGTAGCAGAAACAAC
CGCACGTGTGGATTTAAATGGGGTCTGGAAACCAGAACACGGCAGATTGTTAAAAAGCCAGCGA
AAGACACAATACCATGTCCAACCATTGCAGAATCCAGGAGATGCAAGATGGCCATGAGGCACTG
TCCAGGAGGGAAGAGAACACCAAAGGCCAAAGAGAAGAGAAACAAGAAGAAGAGACGGAAGCTG
ATTGAGAGAGCCCAAGAACAGCACAGCGTCTTCCTTGCTACAGACAGAGTGAATCAATAAAATA
CAAGAAATAGCTAGGGCATTTGGAGGTTTTCTGTTTTGTTTTGTTGTTGTTTTGCAAAAGTGCA
CAAAGCTACTCTCCGATCCACACTGGTGGACAGCATTCCTGATCCTCCGACCAGTATCCATTTC
CAGTAATGTTGCAAAGGGAGGTGCCCGAGCACAGACTCTGGGTTATTTATGTTTTGATTAGAAT
TTGGAGCCTGTGATGGCAGGAGCTTGTTGAGTTGAATCAGTGGGAACTGATGTGTCTGTACTCT
TATGATGAGCACAGTTTGTCATAAGACCCTGTCGCTGGCATGGCGGACCTGCGGGAGGCACGAG
GCTGTAGATCACCATTGGAGAATGCACCTGTGCCTACTTCTGTGGATGACAGTGCTAAGCGAGC
AAGCACTGTTCACTTGTGACTTTTATTTCCCACACCATGCATTGTCAAAGACAAATGAGCATGG
AAAAGGTGTTTAGTGTCACCTCACAGTGTTCTCAGCATCAGTGATCTTCAGATGGTCCTACGAT
GAGACTGCTTCCTAGCTAGGGTATGCTGTGGAAATTCCTGCTACATTTCATCCTAGTGCTAACA
TGTACAGATTCTGCTGAGCTATATTCGAAGCTCCTTACTGTATATTTATGCTTTCTGCGTGAAA
CAAGTTATACCTGATTGCTAAGATGTCACTTTGTTTCTAGTGGTTCTTAACCATGGTCTGGTAC
ATGGCTGTTCTAGTCTTGAAAATTGACAAGTGTTTTGTTGCCTCTTGTTTTCTTTTGTTCCTAT
TATTTTGGAGGGGGTGGGGTGGGCTTGTTTCTAATTGTAAGTATAGGATAAGCCAGTTTGTATA
TAGAGTCAAATGAGTGATATCAGAGTTTCAGTGCTGATAGAACTTCCCCAGTTCGTGTCACCAC
ACACAGAGAGAAAAAGCAGCATGCAGCATCTGGCCATCAGAAGTCAAACTCCTTTTGAGTCCAA
AAATTGGTGACTTATGAAATACAGCTGAAAAGAAGAAGATTTATGTGCAGTTGCTTGTATTTAT
TACACAATCAATTTTCCAATTACATTTTTTTTCAAACTCAAAATAATCCATGACTTTGAACAAT
AAATCACCTGGCCATATTCTTGGGTCACTGGGGAAGCTGCTGTCATGAAACCACTCAGAAAATG
AAAGAGAAAATAGGATGGATTCCCCCAAGTGAGAGTCACAGCTTAATATCTCAGTTGAGTCGAG
ATCAACTACATTAGAACCGAGAACATGTTGGAAGCTTTCCAGTTGACTCACGTGGTCATGGTTT
CAGAAATATCTCTGTCCCCTAGGCTCAGTTGGTCCTTAGACCTATGAATTGGCAAGTTCTAAAT
GCATTATTCTCCTGGATGATCAAGGAGAAAATTAGAACAAAGTTGTATAGTTTTGAGAAAACAT
CCAAAGCAAGACAAAGCCTTTCCTTGCCTTGCCTTGGCAAAACTACCTCTTTAGCATTTCTGTT
GATTCAGAAACATCTTGCTGTTATGTATAGATGTCTTAAGCTTCATTATGAAAATACTGATGCA
AGATAAGCCATATCTGAATGTTGAATTCAACTTTAGGGCTTGAACGTAATCCTAAAGTGTTCAC
CTCTCTCTCTCTCCATGCCTCCTTACATTCTATTCCTATTTACTAAGTGGGTAGGGGTCTCCTT
AATATCATACTTCATTGTTAATAAGTCAATGCTTGTTATGTTTCTGGGCTGTTTTGTGCATTAA
AATCTCAAAAATTGTTTTTTAGACTGTTTTTCTTTGGCTTTAACAGTACACTCAAGGGAAGTGC
ATTACATTCTTTACCAACACTAGTGCCTACTAGTGAGTGATCAAAAACATGAGAGATTATGTTG
ATATCAGTGTTTATGATATTCATTTATGTAAAATATTATTGCATAGTAGTTGAAAGTGGGATTT
TTCAGAACTATGTTTCTTAAGTTCCAATCTAGGCTAAGAAACCTAAGACAAATTGCTTTATCTC
TGTGAGTTCTTATCTATCTATAGGGCTGTATTTTAGGGGCTATATTAGTTAAGACATGTGCTAT
AGTTCTCTGTACCCACAGGTTCTAATGGGCTCTACTCAACTGTGCATCACAAATATTTTAAAAA
TATTGCATCCATCCATACTGAACATATGCTTTTTGTCATTCCTTCGTCATTCCCTACATGTAAT
GTATTTAGAAACATGAAATAATTTTTAGTGTATGAGGAATTTGTACACATATATTTGAAAAACT
ATAACACCAGCTTTGGATTATGACCATCTTTCGATTGTGGTGTTTGCAGGACCTCATGGAAATA
ATGTCATGATGAAACCAAGACATCCTAGTATACAGACTTTTAGTTAAGACCTGGGATAATATAT
ATGTATGAACTGTGGTCGCTATAGCAGATTGCCAAATCCTACACAAATTAGTACCTATTATTTC
TTCCATTGGCTATTTTATATTTTCCCCAAGACATTCTATTAACAAAATAGAATTTAAAATTGTT
CAGTGGTAGAGAATTTTGCTGGCATCCATTATCCTAGGTCCCATCTTTAATACTGCAAAAAAAG
ATGAGTAAACATTTATGGAAGTATCAGACAACTTCAATCTATTGATTAATTTCTAGTCATTAAC
TTTATTCTTATTGGGATTTGCTTATACCCTCTTATTTCCGAGGAGTACGTGTATAAATCTAAAA
CTGAATTCAGGACTGTTTCTCAGTTGGGGTGAAGTCAAGGAAATCAAACCAGGCATTTCAAATG
CACTCTAATATCAAGAATATATTAATTACACTGGTAGTAAATAAGCCATGAAGTCATGTGTGTT
ACCAAAATAAGCCAGAGTGGAGCTATAGCAGGAAGCTACTATCATGATTCGGGGTAGGAGGAAG
GATTGCAGGGAAAGGTGGAATTTCCAAGATGTAATTATCAAGCTATTACCTTAAGCTAAAGCTA
TAGTTGAGAATAGAGTTATAACCACAGGTCATTGAGACCAAGAACAGAACTCATATCAAGGGGA
ATTGAAATCTTAGACACAAGAGAGGGTCAGTGTCAGGTCTTTAGGGACTGTGTTTAATGTGCAC
TTGTTTAGTGTCTTAATTGATACTTTTGGAATATAAAGACAAACATGAATTTAAAAGTAGGTGA
TTCACACCTTAAAGCAGAATAATGAGTTAGCTAGTCAGGGCAATGTATACGGAATAATTATTTA
AGCAGATTGCAATACGACTATGAGGAATCACATTAGCAGACTACCACATGCCTTCTCCTCCAGC
GTCAGCAAATGTTGTCGATCATATTCTTGACTTCTGATAAAAATACCTAGAATCCCAAAGTGGA
GTTCCAGGGAAATACTTCTAAAATTCTGACATGAATAGAGGATTAATAATGTCTAGCTTTTCTC
ATACATGTTAATGTCCAGAAGAGAAACTTTTATCTTCTTCCAGAAAATATTTTTTTTAAAAATG
GCTGTATAAGTGTTTTTCCATATTTATGCTTCTGAGGCTCAGAACTTCTTAAGCAGGCCTCCAA
AATGGTAGTATGTTTTATTTTTTGATAGCTTGGTGTCCACTTATGTCTTATGACAAGAAGTTGA
GTATGGACTATATTTTTTAAGAGTAAAGTCTTGTAGACAATACTTGCAGCATGCTTTTTCTCTG
GTTAGCTTGTTCCATGTGCTTCAGATTGAAGTTTGTTATCATTATGAGTTTCTCTATGGTGGAG
ACAGTAGACCATATGTCAGTGGCAGGAAGGAACCTGACAGGTATATTTTGACATAAAGCCTTAT
GACAAACATTTGAAATCTTGGAAAGAGGAGCCAAGGCACTAGAAAGCAAGAACAGGATCAGGAG
GGTTGAAGAAAAGACAACCAGGAAGAGATGCTAAAGTGCTGTCTGAAAGGTAGAACCAAGAGCG
GTCAGGGAGAAATGAAGACCCATGAAGGCTGTAGAGAAAACTCAGATTTTGTTATATATGGTGG
GCAGAAAAAAATTACTGGATTTTTGTCCTGCTTAAGCAGAAGAGAGATGTGCTCTAATTTCTGT
ACACTGTTCACTAAGTCATCTGTGCAGAAGGTATATTTTAAGAGAAAAAAGCAAAGAGATGAAT
TAAGTTATTGCACTACCCTGGTGAGAATGCATATGACATTGGTTAGTGAACAATATTAAAAGGA
AGAGGGATCTAGGACCCTTGGGAGTTAGATATGAAATAAAGGAACAAATGGAGCCTAAGGTATA
ATCTAGGTCTTTTGTTCTGAGTAAGAATATTTGGGGGACAGAACTGGCAAATGATTACAGTTTT
CATATGCTAAGCATGAAGTGGTGTTAGGTAGCTAAGTAAAAACAGCAAGAAGGCAATTGCTTAT
AATTATGGACTTCAGGGAAAAGGTCAAAGCCAGATTATAATTGGGGGCTATATTGGGATATTGC
TTGTTCTTTGAATCGTAGGCCTTAATGTGATGGCCCAGAAAGAGTACAGATGGGAGAAGAAAGA
CTTTGGACATTCAAATATTCATTATCAACCAGAGGATGGTATGGAAGTAAAGAGAAATAGAGAG
GACCACCAGAAGCAGATAATAGTAGTGACCAAGAAGAATTGCACTTGAAATTGCAATGCACACT
TTTAATCCCAGCATTAACAAATTTAGGAGTCTGAGGCAAGGGGATCAGGAGTTTAAGGATAGTC
TCAGTTAAATGAGACCTGTCCAGGCTACAGAGACATAGCTTTAAAACAGGTTGGAGTTCTAGGC
TTTATGTAGTTCCCTTTCCCTCTGTAATACAATAAAAATAATGAGAGGAGTAAGGACAATTAGA
AAAATTGTAATAATTAAAGGTTGTTGTCTCCTCAATTTTATTTCTGAACCATATACTCCAAGAG
TGAAATTTACACATAACTTACAATCTGTTGAAAGTGGTTTTGATATAGAACAAAAATATGTCAA
TGCTTAAAACACTTGGAAACTACTCTTCACATAAATGTGATAATGATACTTAATTTCAGGTTAC
CATACCATCTACCAATTTCATTTACATTTATGATGAAATAATTATCTCAATGACCCTGCAAGGA
TTTTTCTTTTATTGCTTTCAAAATCAATAAAATGTATCAATTGAGCTACAAAACAAGCATTCTG
TGAATTAGAGGTCCTTGAGTTTGTAATTTTCAGAATTGAGGATTTTTCAAACTTGTAATTATTG
AGTTGCTTTGGTAGCAGCCTTCTGATGTGAGCGCATACATGTCTGAACAGAATTAGGCAATCAC
ATGCACACAATCATAGTATTTAACTAAAGAGCAAGATTGTGGTAAAAATACTTATTTTTTCCAT
GCATTTCTGTGTAAAGTAGAACAAATGAGATCTTTAATTACTTACATTTCAAATTTAAGTTAGA
TAAATGTGTGCTGATAGTTTCCCCATTATACATGCCTCCCCTGGGTATAGTCTCACTTACATGT
GATACCTGGATAAGTGTAGTAAAACCTGGTAGAACTGACCCTCTCCTTTTTGAGCAATGAGTAA
CATTCTATTCCCCAGTTCTCTTGTAGATAGATGGTCCTTGTGCTTGACTTAAATCCATGGGGTT
TCAGAGAAATGGTATATATCCATTTGAGATCCAGCTTTTCTAATAGTAGCAGGTGCACCTTTTG
CATGATGTTTGTGCCTTAAGCACAAAGACATGTCCATGGAGTAAACGAAACCTGTCTTTCAGTT
ACTGTATGGAAGAGAGTTGGCTCAAATACTGGCCCAAGCTATACATGTAAATATCAATATTTGT
TATGTTGAGCTTTAATGATCCTTTGTTACTCTTGACCTTGAGTCAACACCTTCATCATGGACTT
CAGAATGGTGAGAAATACATACCTGTTCTTTAAGCCACA

hide sequence

RefSeq Acc Id:

XM_039079749 ⟹ XP_038935677

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2	7	74,096,378 - 74,239,398 (-)	NCBI

RefSeq Acc Id:

XM_039079750 ⟹ XP_038935678

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2	7	74,096,378 - 74,239,398 (-)	NCBI

Protein Sequences


Protein RefSeqs	NP_001124047	(Get FASTA)	NCBI Sequence Viewer
	XP_008763676	(Get FASTA)	NCBI Sequence Viewer
	XP_008763677	(Get FASTA)	NCBI Sequence Viewer
	XP_017450539	(Get FASTA)	NCBI Sequence Viewer
	XP_038935677	(Get FASTA)	NCBI Sequence Viewer
	XP_038935678	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	BAF03041	(Get FASTA)	NCBI Sequence Viewer
	EDM16320	(Get FASTA)	NCBI Sequence Viewer
	EDM16321	(Get FASTA)	NCBI Sequence Viewer
	EDM16322	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSRNOP00000062362
	ENSRNOP00000062362.1
	ENSRNOP00000069239
	ENSRNOP00000069239.1

RefSeq Acc Id:	NP_001124047 ⟸ NM_001130575
- Peptide Label:	precursor
- UniProtKB:	D3ZCB0 (UniProtKB/TrEMBL), A6HRA2 (UniProtKB/TrEMBL)
- Sequence:	show sequence MRFCLFSFALIILNCMDYSQCQGNRWRRSKRASYVSNPICKGCLSCSKDNGCSRCQQKLFFFLR REGMRQYGECLHSCPSGYYGHRAPDMNRCARCRIENCDSCFSKDFCTKCKAGFYLHRGRCFDEC PEGFAPLDETMECVEGCEVGHWSEWGTCSRNNRTCGFKWGLETRTRQIVKKPAKDTIPCPTIAE SRRCKMAMRHCPGGGSKQSCSYAACLPKAPSSTQ hide sequence

RefSeq Acc Id:	XP_008763677 ⟸ XM_008765455
- Peptide Label:	isoform X3
- UniProtKB:	A6HRA0 (UniProtKB/TrEMBL)
- Sequence:	show sequence MRFCLFSFALIILNCMDYSQCQGNRWRRSKRASYVSNPICKGCLSCSKDNGCSRCQQKLFFFLR REGMRQYGECLHSCPSGYYGHRAPDMNRCARCRIENCDSCFSKDFCTKCKAGFYLHRGRCFDEC PEGFAPLDETMECVEGCEVGHWSEWGTCSRNNRTCGFKWGLETRTRQIVKKPAKDTIPCPTIAE SRRCKMAMRHCPGGKRTPKAKEKRNKKKRRKLIERAQEQHSVFLATDRVNQ hide sequence

RefSeq Acc Id:	XP_008763676 ⟸ XM_008765454
- Peptide Label:	isoform X1
- UniProtKB:	I7GAZ6 (UniProtKB/TrEMBL)
- Sequence:	show sequence MRFCLFSFALIILNCMDYSQCQGNRWRRSKRGGSRSPEASYVSNPICKGCLSCSKDNGCSRCQQ KLFFFLRREGMRQYGECLHSCPSGYYGHRAPDMNRCARCRIENCDSCFSKDFCTKCKAGFYLHR GRCFDECPEGFAPLDETMECVEGCEVGHWSEWGTCSRNNRTCGFKWGLETRTRQIVKKPAKDTI PCPTIAESRRCKMAMRHCPGGKRTPKAKEKRNKKKRRKLIERAQEQHSVFLATDRVNQ hide sequence

RefSeq Acc Id:

XP_017450539 ⟸ XM_017595050

- Peptide Label:

isoform X2

- Sequence:

show sequence

MRFCLFSFALIILNCMDYSQCQGNRWRRSKRGGSRSPEASYVSNPICKGCLSCSKDNGCSRCQQ
KLFFFLRREGMRQYGECLHSCPSGYYGHRAPDMNRCARCRIENCDSCFSKDFCTKCKAGFYLHR
GRCFDECPEGFAPLDETMECVGCEVGHWSEWGTCSRNNRTCGFKWGLETRTRQIVKKPAKDTIP
CPTIAESRRCKMAMRHCPGGKRTPKAKEKRNKKKRRKLIERAQEQHSVFLATDRVNQ

hide sequence

RefSeq Acc Id:

ENSRNOP00000062362 ⟸ ENSRNOT00000067333

RefSeq Acc Id:

ENSRNOP00000069239 ⟸ ENSRNOT00000082741

RefSeq Acc Id:

ENSRNOP00000071706 ⟸ ENSRNOT00000087177

RefSeq Acc Id:	XP_038935678 ⟸ XM_039079750
- Peptide Label:	isoform X1
- UniProtKB:	I7GAZ6 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038935677 ⟸ XM_039079749
- Peptide Label:	isoform X1
- UniProtKB:	I7GAZ6 (UniProtKB/TrEMBL)

Protein Domains

R-spondin Fu-CRD

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-I7GAZ6-F1-model_v2	AlphaFold	I7GAZ6	1-250	view protein structure

Transcriptome

eQTL		View at Phenogen
WGCNA		View at Phenogen
Tissue/Strain Expression		View at Phenogen

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	RGD:1562331	AgrOrtholog
BioCyc Gene	G2FUF-33494	BioCyc
Ensembl Genes	ENSRNOG00000037687	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSRNOT00000067333	ENTREZGENE
	ENSRNOT00000067333.2	UniProtKB/TrEMBL
	ENSRNOT00000082741	ENTREZGENE
	ENSRNOT00000082741.2	UniProtKB/TrEMBL
Gene3D-CATH	2.20.100.10	UniProtKB/TrEMBL
InterPro	Furin_repeat	UniProtKB/TrEMBL
	Growth_fac_rcpt	UniProtKB/TrEMBL
	Rspo_Fu-CRD_dom	UniProtKB/TrEMBL
	Thrombospondin_1_rpt	UniProtKB/TrEMBL
	TSP1_rpt_sf	UniProtKB/TrEMBL
KEGG Report	rno:500863	UniProtKB/TrEMBL
NCBI Gene	500863	ENTREZGENE
PANTHER	NEUROHYPOPHYSIAL HORMONES, N-TERMINAL DOMAIN CONTAINING PROTEIN	UniProtKB/TrEMBL
	PTHR46987:SF4	UniProtKB/TrEMBL
Pfam	Furin-like_2	UniProtKB/TrEMBL
PhenoGen	Rspo2	PhenoGen
PROSITE	TSP1	UniProtKB/TrEMBL
RatGTEx	ENSRNOG00000037687	RatGTEx
SMART	SM00261	UniProtKB/TrEMBL
	TSP1	UniProtKB/TrEMBL
Superfamily-SCOP	Grow_fac_recept	UniProtKB/TrEMBL
	TSP1	UniProtKB/TrEMBL
UniProt	A6HRA0	ENTREZGENE, UniProtKB/TrEMBL
	A6HRA2	ENTREZGENE, UniProtKB/TrEMBL
	D3ZCB0	ENTREZGENE, UniProtKB/TrEMBL
	I7GAZ6	ENTREZGENE, UniProtKB/TrEMBL

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2011-08-01	Rspo2	R-spondin 2	Rspo2	R-spondin 2 homolog (Xenopus laevis)	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2008-02-29	Rspo2	R-spondin 2 homolog (Xenopus laevis)	RGD1562331_predicted	similar to RIKEN cDNA 2610028F08 (predicted)	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2006-03-07	RGD1562331_predicted	similar to RIKEN cDNA 2610028F08 (predicted)	LOC500863	similar to RIKEN cDNA 2610028F08	Symbol and Name status set to approved	1299863	APPROVED
2006-02-09	LOC500863	similar to RIKEN cDNA 2610028F08			Symbol and Name status set to provisional	70820	PROVISIONAL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

Imported Disease Annotations - ClinVar

Imported Disease Annotations - OMIM

RGD Manual Annotations

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Imported Disease Annotations - ClinVar

Imported Disease Annotations - OMIM

RGD Manual Annotations