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Gene: LOC500827 (similar to hypothetical protein FLJ35821) Rattus norvegicus
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Symbol: LOC500827
Name: similar to hypothetical protein FLJ35821
Description: Predicted to have mRNA binding activity. Predicted to be involved in poly(A)+ mRNA export from nucleus. Predicted to colocalize with the transcription export complex. Orthologous to human C12orf50 (chromosome 12 open reading frame 50); INTERACTS WITH bisphenol A; aflatoxin B1 (ortholog).
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: hypothetical protein LOC500827; uncharacterized protein C12orf50 homolog
Orthologs:
Homo sapiens (human) : C12orf50 (chromosome 12 open reading frame 50)  HGNC  Alliance
Mus musculus (house mouse) : 1700017N19Rik (RIKEN cDNA 1700017N19 gene)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : LOC102010018 (chromosome unknown open reading frame, human C12orf50)
Pan paniscus (bonobo/pygmy chimpanzee) : C12H12orf50 (chromosome 12 C12orf50 homolog)
Canis lupus familiaris (dog) : C15H12orf50 (chromosome 15 C12orf50 homolog)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : CUNH12orf50 (chromosome unknown C12orf50 homolog)
Sus scrofa (pig) : C5H12orf50 (chromosome 5 C12orf50 homolog)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0740,316,165 - 40,350,482 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.0740,351,715 - 40,389,249 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4738,240,879 - 38,273,269 (+)NCBIRGSC3.4rn4RGSC3.4
Celera732,403,803 - 32,435,401 (+)NCBICelera
Cytogenetic Map7q13NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated

Genomics

Comparative Map Data
QTLs in Region (Rnor_6.0)

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 5.0)

Additional Information

External Database Links
Nomenclature History
 
More on LOC500827
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1563125
Created: 2006-02-09
Species: Rattus norvegicus
Last Modified: 2019-04-12
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.