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Gene: Pop1 (POP1 homolog, ribonuclease P/MRP subunit) Rattus norvegicus
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Symbol: Pop1
Name: POP1 homolog, ribonuclease P/MRP subunit
RGD ID: 1308609
Description: Predicted to contribute to ribonuclease P activity. Predicted to be involved in RNA phosphodiester bond hydrolysis, endonucleolytic; tRNA 5'-leader removal; and tRNA catabolic process. Predicted to localize to nucleolar ribonuclease P complex and ribonuclease MRP complex. Orthologous to human POP1 (POP1 homolog, ribonuclease P/MRP subunit); PARTICIPATES IN tRNA maturation pathway; ribosome biogenesis pathway; RNA transport pathway; INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; amphetamine; bisphenol A.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: LOC315045; processing of precursor 1; processing of precursor 1, ribonuclease P/MRP family, (S. cerevisiae) ; processing of precursor 1, ribonuclease P/MRP subunit; processing of precursor 1, ribonuclease P/MRP subunit (S. cerevisiae); ribonucleases P/MRP protein subunit POP1
Orthologs:
Homo sapiens (human) : POP1 (POP1 homolog, ribonuclease P/MRP subunit)  HGNC  Alliance
Mus musculus (house mouse) : Pop1 (processing of precursor 1, ribonuclease P/MRP family, (S. cerevisiae))  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Pop1 (POP1 homolog, ribonuclease P/MRP subunit)
Pan paniscus (bonobo/pygmy chimpanzee) : POP1 (POP1 homolog, ribonuclease P/MRP subunit)
Canis lupus familiaris (dog) : POP1 (POP1 homolog, ribonuclease P/MRP subunit)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Pop1 (POP1 homolog, ribonuclease P/MRP subunit)
Sus scrofa (pig) : POP1 (POP1 homolog, ribonuclease P/MRP subunit)
Chlorocebus sabaeus (African green monkey) : POP1 (POP1 homolog, ribonuclease P/MRP subunit)
Heterocephalus glaber (naked mole-rat) : Pop1 (POP1 homolog, ribonuclease P/MRP subunit)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0773,270,403 - 73,298,209 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl773,270,455 - 73,298,239 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0773,436,473 - 73,473,185 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4769,944,414 - 69,979,794 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.1769,965,163 - 70,000,525 (+)NCBI
Celera762,806,384 - 62,834,025 (+)NCBICelera
Cytogenetic Map7q22NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)
Damaging Variants

Additional Information

External Database Links
Nomenclature History
 
More on Pop1
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1308609
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2020-08-20
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.