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Gene: Otogl (otogelin-like) Rattus norvegicus
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Symbol: Otogl
Name: otogelin-like
Description: Predicted to have alpha-L-arabinofuranosidase activity. Predicted to be involved in L-arabinose metabolic process and sensory perception of sound. Predicted to localize to the extracellular region. Human ortholog(s) of this gene implicated in autosomal recessive nonsyndromic deafness 84B. Orthologous to human OTOGL (otogelin like); INTERACTS WITH atrazine; aflatoxin B2 (ortholog); benzo[a]pyrene (ortholog).
Type: protein-coding
RefSeq Status: MODEL
Also known as: LOC685850; LOC685868; otogelin-like, pseudogene 1; Otogl-ps1; RGD1564294; similar to otogelin
Orthologs:
Homo sapiens (human) : OTOGL (otogelin like)  HGNC  Alliance
Mus musculus (house mouse) : Otogl (otogelin-like)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Otogl (otogelin like)
Pan paniscus (bonobo/pygmy chimpanzee) : OTOGL (otogelin like)
Canis lupus familiaris (dog) : OTOGL (otogelin like)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Otogl (otogelin like)
Sus scrofa (pig) : OTOGL (otogelin like)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0751,768,469 - 51,935,442 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.0751,784,572 - 51,946,812 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4746,451,864 - 46,595,814 (-)NCBIRGSC3.4rn4RGSC3.4
Celera739,940,457 - 40,102,337 (-)NCBICelera
Cytogenetic Map7q21NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
RGD Disease Portals

Genomics

Comparative Map Data
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome

Strain Variation

Strain Sequence Variants (Rnor 5.0)
Damaging Variants

Additional Information

External Database Links
Nomenclature History
 
More on Otogl
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1589018
Created: 2006-11-19
Species: Rattus norvegicus
Last Modified: 2019-04-12
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.