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Gene: Tmtc2 (transmembrane O-mannosyltransferase targeting cadherins 2) Rattus norvegicus

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Symbol:

Tmtc2

Name:

transmembrane O-mannosyltransferase targeting cadherins 2

RGD ID:

1309848

Description:

Predicted to enable dolichyl-phosphate-mannose-protein mannosyltransferase activity. Predicted to be involved in calcium ion homeostasis and protein O-linked mannosylation. Predicted to be located in endoplasmic reticulum. Predicted to be active in endoplasmic reticulum membrane. Orthologous to human TMTC2 (transmembrane O-mannosyltransferase targeting cadherins 2); INTERACTS WITH 2-methoxyethanol; 6-propyl-2-thiouracil; alpha-Zearalanol.

Type:

protein-coding

RefSeq Status:

VALIDATED

Previously known as:

LOC299762; RGD1309848; similar to RIKEN cDNA D330034A10 gene; transmembrane and tetratricopeptide repeat containing 2; transmembrane and TPR repeat-containing protein 2

RGD Orthologs

Alliance Orthologs

More Info

more info ...

Allele / Splice:

Tmtc2^{Tn(sb-T2/Bart3)2.276Mcwi}

Genetic Models:

F344-Tmtc2^{Tn(sb-T2/Bart3)2.276Mcwi}

Latest Assembly:

mRatBN7.2 - mRatBN7.2 Assembly

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	7	42,280,746 - 42,695,651 (-)	NCBI		GRCr8
mRatBN7.2	7	40,392,377 - 40,806,685 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	7	40,394,220 - 40,807,298 (-)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	7	42,297,607 - 42,708,576 (-)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	7	44,500,689 - 44,911,641 (-)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	7	44,275,578 - 44,686,535 (-)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	7	47,179,596 - 47,586,777 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	7	47,181,981 - 47,586,137 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	7	47,197,110 - 47,603,261 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	7	43,667,983 - 44,133,854 (-)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	7	43,688,792 - 44,154,492 (-)	NCBI
Celera	7	37,294,447 - 37,702,308 (-)	NCBI		Celera
Cytogenetic Map	7	q21	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

COVID-19 (ISO)

Deafness (ISO)

Nonsyndromic Sensorineural Hearing Loss (ISO)

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

1,2-dichloroethane (ISO)

17beta-hydroxy-5alpha-androstan-3-one (ISO)

2,3,7,8-tetrachlorodibenzodioxine (ISO)

2-methoxyethanol (EXP)

3,3',4,4'-tetrachlorobiphenyl (ISO)

3-methylcholanthrene (ISO)

6-propyl-2-thiouracil (EXP)

aflatoxin B1 (ISO)

alpha-Zearalanol (EXP)

amiodarone (ISO)

amphetamine (EXP)

aristolochic acid A (ISO)

arsane (ISO)

arsenic atom (ISO)

arsenous acid (ISO)

atrazine (ISO)

Benoxacor (ISO)

benzo[a]pyrene (ISO)

benzo[b]fluoranthene (ISO)

benzo[e]pyrene (ISO)

bisphenol A (EXP,ISO)

cadmium dichloride (ISO)

calcitriol (ISO)

carbon nanotube (ISO)

chloroprene (ISO)

chlorpyrifos (ISO)

choline (ISO)

cidofovir anhydrous (ISO)

cisplatin (ISO)

coumestrol (ISO)

cyclosporin A (ISO)

DDT (EXP)

diarsenic trioxide (ISO)

dibenz[a,h]anthracene (ISO)

Dibutyl phosphate (ISO)

dibutyl phthalate (EXP,ISO)

dichloroacetic acid (ISO)

dioxygen (ISO)

dorsomorphin (ISO)

doxorubicin (ISO)

Enterolactone (ISO)

entinostat (ISO)

epoxiconazole (ISO)

ethanol (ISO)

folic acid (ISO)

formaldehyde (ISO)

fulvestrant (ISO)

hydrogen peroxide (ISO)

ifosfamide (ISO)

L-methionine (ISO)

lead(0) (ISO)

methapyrilene (ISO)

methoxychlor (EXP)

methyl methanesulfonate (ISO)

methylmercury chloride (ISO)

ozone (ISO)

paracetamol (EXP,ISO)

perfluorohexanesulfonic acid (ISO)

perfluorononanoic acid (ISO)

perfluorooctane-1-sulfonic acid (ISO)

perfluorooctanoic acid (EXP,ISO)

phenobarbital (ISO)

pirinixic acid (ISO)

resveratrol (ISO)

SB 431542 (ISO)

silicon dioxide (ISO)

sodium arsenite (ISO)

sunitinib (ISO)

tetrachloroethene (ISO)

tetrachloromethane (ISO)

thioacetamide (EXP)

titanium dioxide (ISO)

trichloroethene (ISO)

trichostatin A (ISO)

valproic acid (ISO)

zoledronic acid (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

biological_process (ND)

calcium ion homeostasis (ISO)

protein O-linked mannosylation (IBA,ISO)

Cellular Component

endoplasmic reticulum (ISO)

endoplasmic reticulum membrane (IBA,ISO)

Molecular Function

dolichyl-phosphate-mannose-protein mannosyltransferase activity (ISO)

mannosyltransferase activity (IBA)

protein binding (ISO)

References

References - curated

#	Reference Title	Reference Citation
1.	Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium.	Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2.	Rat ISS GO annotations from MGI mouse gene data--August 2006	MGD data from the GO Consortium
3.	GOA pipeline	RGD automated data pipeline
4.	ClinVar Automated Import and Annotation Pipeline	RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
5.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions
6.	Comprehensive gene review and curation	RGD comprehensive gene curation
7.	Association of TMTC2 With Human Nonsyndromic Sensorineural Hearing Loss.	Runge CL, etal., JAMA Otolaryngol Head Neck Surg. 2016 Jun 16. doi: 10.1001/jamaoto.2016.1444.

Additional References at PubMed

PMID:24764305	PMID:28973932

Genomics

Comparative Map Data

Tmtc2
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	7	42,280,746 - 42,695,651 (-)	NCBI		GRCr8
mRatBN7.2	7	40,392,377 - 40,806,685 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	7	40,394,220 - 40,807,298 (-)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	7	42,297,607 - 42,708,576 (-)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	7	44,500,689 - 44,911,641 (-)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	7	44,275,578 - 44,686,535 (-)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	7	47,179,596 - 47,586,777 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	7	47,181,981 - 47,586,137 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	7	47,197,110 - 47,603,261 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	7	43,667,983 - 44,133,854 (-)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	7	43,688,792 - 44,154,492 (-)	NCBI
Celera	7	37,294,447 - 37,702,308 (-)	NCBI		Celera
Cytogenetic Map	7	q21	NCBI

TMTC2
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	12	82,686,906 - 83,134,866 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	12	82,686,880 - 83,134,870 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	12	83,080,685 - 83,528,645 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	12	81,605,065 - 82,052,196 (+)	NCBI	NCBI36	Build 36	hg18	NCBI36
Celera	12	82,748,495 - 83,195,421 (+)	NCBI		Celera
Cytogenetic Map	12	q21.31	NCBI
HuRef	12	80,139,235 - 80,586,094 (+)	NCBI		HuRef
CHM1_1	12	83,046,833 - 83,493,575 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	12	82,666,441 - 83,114,534 (+)	NCBI		T2T-CHM13v2.0

Tmtc2
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	10	105,023,524 - 105,410,340 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	10	105,023,524 - 105,410,312 (-)	Ensembl		GRCm39 Ensembl
GRCm38	10	105,187,663 - 105,574,479 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	10	105,187,663 - 105,574,451 (-)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	10	104,624,719 - 105,011,535 (-)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	10	104,591,773 - 104,978,561 (-)	NCBI		MGSCv36	mm8
Celera	10	107,116,217 - 107,505,137 (-)	NCBI		Celera
Cytogenetic Map	10	D1	NCBI
cM Map	10	54.72	NCBI

Tmtc2
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955405	20,969,952 - 21,359,783 (+)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955405	20,969,836 - 21,357,939 (+)	NCBI	ChiLan1.0	ChiLan1.0

TMTC2
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	10	90,738,676 - 91,185,559 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	12	90,735,094 - 91,186,578 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	12	80,209,070 - 80,660,058 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	12	83,316,647 - 83,761,761 (+)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	12	83,317,358 - 83,759,281 (+)	Ensembl	panpan1.1		panPan2

TMTC2
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	15	24,629,610 - 25,017,936 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	15	24,629,157 - 25,016,555 (+)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	15	25,060,632 - 25,448,131 (+)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	15	25,377,180 - 25,529,388 (+)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	15	25,008,752 - 25,526,997 (+)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	15	24,585,728 - 24,973,537 (+)	NCBI		UMICH_Zoey_3.1

Tmtc2
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024404945	35,255,207 - 35,632,245 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936507	603,868 - 980,230 (+)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936507	603,222 - 980,229 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

TMTC2
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	5	98,697,035 - 99,229,550 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	5	98,695,404 - 99,085,243 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	5	103,474,951 - 103,667,323 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

TMTC2
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	11	78,130,490 - 78,569,546 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	11	78,296,438 - 78,569,740 (+)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666037	166,791,023 - 167,244,956 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Tmtc2
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624837	1,998,083 - 2,398,451 (+)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624837	1,998,443 - 2,398,290 (+)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants

Variants in Tmtc2
2256 total Variants

miRNA Target Status

Predicted Target Of

	Summary Value
Count of predictions:	87
Count of miRNA genes:	66
Interacting mature miRNAs:	73
Transcripts:	ENSRNOT00000006086
Prediction methods:	Microtar, Miranda, Rnahybrid, Targetscan
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (mRatBN7.2)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
1354644	Spl4	Serum phospholipid level QTL 4	4.9		blood phospholipid amount (VT:0006084)	blood phospholipid level (CMO:0001169)	7	19654317	49753746	Rat
7411569	Bw137	Body weight QTL 137		0.001	body mass (VT:0001259)	body weight gain (CMO:0000420)	7	21921195	66921195	Rat
9590102	Sffal5	Serum free fatty acids level QTL 5	8.62	0.001	blood free fatty acid amount (VT:0001553)	plasma free fatty acids level (CMO:0000546)	7	5329019	50329019	Rat
1578652	Bmd15	Bone mineral density QTL 15	5.2		femur mineral mass (VT:0010011)	trabecular volumetric bone mineral density (CMO:0001729)	7	9866467	60460686	Rat
1641885	Alcrsp9	Alcohol response QTL 9			alcohol metabolism trait (VT:0015089)	blood ethanol level (CMO:0000535)	7	24099606	69099606	Rat
631503	Bp102	Blood pressure QTL 102	1.9		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	7	1	44822433	Rat
1549840	Bss5	Bone structure and strength QTL 5	9.8		femur strength trait (VT:0010010)	femur midshaft polar moment of inertia (CMO:0001669)	7	24751841	69751841	Rat
10755438	Coatc9	Coat color QTL 9		0	coat/hair pigmentation trait (VT:0010463)	pigmented ventral coat/hair area to total ventral coat/hair area ratio (CMO:0001812)	7	3529280	48529280	Rat
1300127	Srn1	Serum renin concentration QTL 1	3.87		blood renin amount (VT:0003349)	plasma renin activity level (CMO:0000116)	7	29409683	84928080	Rat
2298547	Neuinf5	Neuroinflammation QTL 5	3.7		nervous system integrity trait (VT:0010566)	spinal cord Cd74 protein level (CMO:0002131)	7	9462246	58265113	Rat
631513	Scl7	Serum cholesterol level QTL 7	4.1		blood cholesterol amount (VT:0000180)	serum total cholesterol level (CMO:0000363)	7	37960569	82960569	Rat
10059592	Kidm45	Kidney mass QTL 45	3.95	0.025	kidney mass (VT:0002707)	both kidneys wet weight to body weight ratio (CMO:0000340)	7	7573985	52573985	Rat
10755440	Coatc10	Coat color QTL 10		0	coat/hair pigmentation trait (VT:0010463)	pigmented ventral coat/hair area to total ventral coat/hair area ratio (CMO:0001812)	7	7496499	52496499	Rat
1354637	Scl30	Serum cholesterol level QTL 30	3.7		blood cholesterol amount (VT:0000180)	blood total cholesterol level (CMO:0000051)	7	19654317	49753746	Rat
10755453	Coatc12	Coat color QTL 12		0	coat/hair pigmentation trait (VT:0010463)	pigmented ventral coat/hair area to total ventral coat/hair area ratio (CMO:0001812)	7	31112832	76112832	Rat
1354639	Spl5	Serum phospholipid level QTL 5	3.9		blood LDL phospholipid amount (VT:0010505)	blood low density lipoprotein phospholipid level (CMO:0001568)	7	19654317	52888450	Rat
10755451	Coatc11	Coat color QTL 11		0	coat/hair pigmentation trait (VT:0010463)	pigmented ventral coat/hair area to total ventral coat/hair area ratio (CMO:0001812)	7	17944357	62944357	Rat
2317059	Aia15	Adjuvant induced arthritis QTL 15	2.46		joint integrity trait (VT:0010548)	right rear ankle joint diameter (CMO:0002150)	7	17004598	62004598	Rat
61410	Bw19	Body weight QTL 19	6.2	0.001	body mass (VT:0001259)	body weight (CMO:0000012)	7	1	44782185	Rat
7411605	Foco14	Food consumption QTL 14	24.1	0.001	eating behavior trait (VT:0001431)	feed conversion ratio (CMO:0001312)	7	34293282	79293282	Rat
1643004	Pain2	Pain QTL 2	1		mechanical nociception trait (VT:0002734)	self mutilation severity score (CMO:0002145)	7	9462246	98011544	Rat
631534	Lnnr1	Liver neoplastic nodule remodeling QTL 1	3.85	0.001	liver integrity trait (VT:0010547)	liver remodeling tumorous lesion number to liver total tumorous lesion number ratio (CMO:0001705)	7	34293282	79293282	Rat
634336	Anxrr17	Anxiety related response QTL 17	3.66		locomotor behavior trait (VT:0001392)	number of entries into a discrete space in an experimental apparatus (CMO:0000960)	7	924703	115097879	Rat
70190	Mcs6	Mammary carcinoma susceptibility QTL 6	2.29		mammary gland integrity trait (VT:0010552)	mammary tumor number (CMO:0000343)	7	26737401	63902784	Rat
1300132	Bp182	Blood pressure QTL 182	3.49		arterial blood pressure trait (VT:2000000)	blood pressure time series experimental set point of the baroreceptor response (CMO:0002593)	7	19654317	84928080	Rat
1300138	Hrtrt9	Heart rate QTL 9	4.72		heart pumping trait (VT:2000009)	heart rate (CMO:0000002)	7	29409683	53612950	Rat
10402855	Bp379	Blood pressure QTL 379		0.21	arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	7	29409683	74409683	Rat
738033	Anxrr6	Anxiety related response QTL 6	4.1		exploratory behavior trait (VT:0010471)	percentage of entries into a discrete space in an experimental apparatus (CMO:0000961)	7	15573889	60573889	Rat

Markers in Region

D7Got37

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	7	40,498,993 - 40,499,147 (+)	MAPPER	mRatBN7.2
Rnor_6.0	7	47,285,795 - 47,285,948	NCBI	Rnor6.0
Rnor_5.0	7	47,301,048 - 47,301,201	UniSTS	Rnor5.0
RGSC_v3.4	7	43,772,693 - 43,772,847	RGD	RGSC3.4
RGSC_v3.4	7	43,772,694 - 43,772,847	UniSTS	RGSC3.4
RGSC_v3.1	7	43,792,965 - 43,793,118	RGD
Celera	7	37,397,958 - 37,398,111	UniSTS
RH 3.4 Map	7	359.9	UniSTS
RH 3.4 Map	7	359.9	RGD
RH 2.0 Map	7	321.2	RGD
Cytogenetic Map	7	q21	UniSTS

D7Got36

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	7	40,444,264 - 40,444,450 (+)	MAPPER	mRatBN7.2
Rnor_6.0	7	47,231,373 - 47,231,558	NCBI	Rnor6.0
Rnor_5.0	7	47,246,668 - 47,246,853	UniSTS	Rnor5.0
RGSC_v3.4	7	43,720,176 - 43,720,362	RGD	RGSC3.4
RGSC_v3.4	7	43,720,177 - 43,720,362	UniSTS	RGSC3.4
RGSC_v3.1	7	43,740,448 - 43,740,633	RGD
Celera	7	37,343,805 - 37,343,990	UniSTS
RH 3.4 Map	7	364.3	RGD
RH 3.4 Map	7	364.3	UniSTS
Cytogenetic Map	7	q21	UniSTS

AU047328

Rat Assembly	Chr	Position (strand)	Source	JBrowse
GRCr8	7	42,637,601 - 42,637,847 (+)	Marker Load Pipeline
mRatBN7.2	7	40,751,092 - 40,751,340 (+)	MAPPER	mRatBN7.2
Rnor_6.0	7	47,531,856 - 47,532,101	NCBI	Rnor6.0
Rnor_5.0	7	47,548,158 - 47,548,403	UniSTS	Rnor5.0
RGSC_v3.4	7	44,076,063 - 44,076,308	UniSTS	RGSC3.4
Celera	7	37,646,306 - 37,646,540	UniSTS
Cytogenetic Map	7	q21	UniSTS

RH133880

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	7	40,392,554 - 40,392,752 (+)	MAPPER	mRatBN7.2
Rnor_6.0	7	47,179,774 - 47,179,971	NCBI	Rnor6.0
Rnor_5.0	7	47,195,445 - 47,195,642	UniSTS	Rnor5.0
RGSC_v3.4	7	43,666,318 - 43,666,515	UniSTS	RGSC3.4
Celera	7	37,292,782 - 37,292,979	UniSTS
RH 3.4 Map	7	368.2	UniSTS
Cytogenetic Map	7	q21	UniSTS

BE112859

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	7	40,764,983 - 40,765,145 (+)	MAPPER	mRatBN7.2
Rnor_6.0	7	47,544,477 - 47,544,638	NCBI	Rnor6.0
Rnor_5.0	7	47,561,601 - 47,561,762	UniSTS	Rnor5.0
RGSC_v3.4	7	44,092,194 - 44,092,355	UniSTS	RGSC3.4
Celera	7	37,660,656 - 37,660,817	UniSTS
RH 3.4 Map	7	351.6	UniSTS
Cytogenetic Map	7	q21	UniSTS

RH140341

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	7	40,452,128 - 40,452,250 (+)	MAPPER	mRatBN7.2
Rnor_6.0	7	47,239,237 - 47,239,358	NCBI	Rnor6.0
Rnor_5.0	7	47,254,532 - 47,254,653	UniSTS	Rnor5.0
RGSC_v3.4	7	43,728,041 - 43,728,162	UniSTS	RGSC3.4
Celera	7	37,351,667 - 37,351,787	UniSTS
RH 3.4 Map	7	364.4	UniSTS
Cytogenetic Map	7	q21	UniSTS

AA800171

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	7	40,400,253 - 40,400,428 (+)	MAPPER	mRatBN7.2
Rnor_6.0	7	47,187,473 - 47,187,647	NCBI	Rnor6.0
Rnor_5.0	7	47,203,144 - 47,203,318	UniSTS	Rnor5.0
RGSC_v3.4	7	43,674,017 - 43,674,191	UniSTS	RGSC3.4
Celera	7	37,300,481 - 37,300,655	UniSTS
RH 3.4 Map	7	358.8	UniSTS
Cytogenetic Map	7	q21	UniSTS

Genetic Models

This gene Tmtc2 is modified in the following models/strains:

F344-Tmtc2^{Tn(sb-T2/Bart3)2.276Mcwi}

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Download All Expressed Objects for this Gene

alimentary part of gastrointestinal system	appendage	circulatory system	ectoderm	endocrine system	endoderm	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	mesenchyme	mesoderm	nervous system	renal system	reproductive system	respiratory system
9	11	49	113	91	90	59	25	59	6	218	97	93	45	60	31

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_001171177	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017594739	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039078703	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039078704	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039078706	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AAHX01048913	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AAHX01048914	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AAHX01048915	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AAHX01048916	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AAHX01048917	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AAHX01048918	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AAHX01048919	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AAHX01048920	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AAHX01048921	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AAHX01048922	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AAHX01048923	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AAHX01048924	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AAHX01048925	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AAHX01048926	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AAHX01048927	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AAHX01048928	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AAHX01048929	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AAHX01048930	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AAHX01048931	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AAHX01048932	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AAHX01048933	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AAHX01048934	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AAHX01048935	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AAHX01048936	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CH473960	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAXUCZ010000007	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSRNOT00000006086 ⟹ ENSRNOP00000006086

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	7	40,394,220 - 40,807,298 (-)	Ensembl
Rnor_6.0 Ensembl	7	47,181,981 - 47,586,137 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000093853 ⟹ ENSRNOP00000086192

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	7	40,453,179 - 40,807,298 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000113359 ⟹ ENSRNOP00000094183

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	7	40,454,451 - 40,807,298 (-)	Ensembl

RefSeq Acc Id:

NM_001171177 ⟹ NP_001164648

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	7	42,280,746 - 42,693,151 (-)	NCBI
mRatBN7.2	7	40,394,220 - 40,806,651 (-)	NCBI
Rnor_6.0	7	47,181,439 - 47,586,137 (-)	NCBI
Rnor_5.0	7	47,197,110 - 47,603,261 (-)	NCBI
Celera	7	37,294,447 - 37,702,308 (-)	NCBI

Sequence:

show sequence

ATGATTGCAGAGTTGGTGAGCAGCGCTCTGGGGCTCGCCTTGTATCTCAACACCCTGAGTGCGG
ATTTCTGCTACGATGACAGCCGTGCTATCAAGACTAATCAGGACCTGCTGCCAGAAACCCCCTG
GACCCACATTTTCTATAATGATTTCTGGGGGACTCTTCTAACCCACAGTGGTAGCCACAAATCC
TACCGGCCGCTCTGCACTCTTTCTTTTCGACTGAATCATGCCATCGGAGGGCTGAATCCCTGGA
GTTATCACCTTGTCAATGTCCTGTTGCACGCGGCCGTCACCGGCCTCTTCACACGCTTCTCCAA
GGCCCTGCTTGGGGACGGATACTGGACTTTCATGGCGGGCTTGATGTTTGCCTCGCACCCCATT
CACACGGAGGCAGTGGCGGGCATCGTGGGCCGGGCAGACGTGGGCGCCAGTCTCTTTTTCCTCC
TGTCCTTGCTCTGCTACACCAAGCACTGTTCTACAAGAGGCTACTCAGCCAGAACTTGGGGCTG
GTTCCTGGGGACAGGACTGTGCGCTGGATGCAGCATGCTGTGGAAGGAGCAAGGAGTGACCGTC
CTCGCAGTTTCAGCCGTTTATGACGTCTTTGTCTTCCACAGGCTGAAGATGAGGCAGATTCTTC
CTACCATTTACAAAAGGAAGAACTTGTCTCTCTTTCTCAGCATTAGCTTGTTAACATTCTGGGG
GACCAGCCTTTTGGGTGCCCGGTTATACTGGATGGGCAATAAACCACCAAGCTTTTCCAACTCC
GACAACCCCGCTGCTGACTCGGACAGCCTTTTGGCTCGCACGCTCACTTTCTTCTATTTACCTA
CCAAGAACCTCTGGCTATTGCTCTGCCCGGACACCCTGAGCTTTGATTGGTCCATGGACGCCGT
GCCTCTTCTCAAAACAGTTTGTGATTGGAGAAATCTACACACTGTGGCCTTCTATTCTGGACTT
CTCCTGCTCGCCTACTGTGGTTTGAAGAGCCCAAGTTTAGAAGGAGAGTGCAACGGGAAAGCTG
TGACAAACGGCAAGCAGAACGCCAATGGCCATAGTTGCTACTCAGACGTGGAGTACCGGAACTC
AGAAATTAAGCCCAGCTTTGCATCCAAAGTAGAGAATGGAATTAAAAGTTGCGTATCACAGAGA
CCTCAGCTCCCTTCCACTGAGAACATTGTCATCCTGTCTTTATCTTTGTTGATAATACCTTTTA
TTCCTGCCACGAACCTGTTTTTCTATGTCGGCTTTGTAATCGCAGAGCGAGTCTTATATATTCC
CAGTATGGGCTTCTGCCTTCTGATCACAGTGGGCGCCAGAGCCCTTTATGTCAAAGTACAAAAG
AGGTTTCTCAAGAGCCTGGTTTTTTATGCTACAGCAACGTTAATTGTCTTCTACGGACTCAAGA
CTGCGATCAGGAACGGAGACTGGCAGAATGAGGAGATGCTGTATAGATCAGGGATCAAAGTGAA
CCCCGCCAAAGCATGGGGTAACCTTGGAAATGTTCTGAAGAGTCAGAGTAAAATCTCTGAAGCT
GAAATCGCCTATAGAAATGCTCTGTACTACCGCAGCAACATGGCTGACATGCTGTATAATTTAG
GGTTGCTGCTCCAAGAGAACAGCAGGTTTGCAGAAGCTCTCCATTATTACAAACTGGCTGTCGG
CAGCAGGCCTACCCTGGCTTCTGCCTATTTAAACACCGGCATCATTCTCATGAACCAAGGGAAG
ACAGAAGAAGCCCGACGTACATTCCTCAAGTGTTCTGAGATTCCAGATGAGAATCTGAAGGATC
CTCATGCACATAAGAGTTCTGTTACCAGCTGCCTGTACAACCTCGGGAAACTCTATCATGAGCA
AGGACGCTATGAGGAAGCCCTGAGTGTTTATAGGGAAGCAATTCAGAAGATGCCAAGGCAGTTT
GCCCCTCAGAGCTTATACAACATGATGGGCGAAGCCTACATGAGACTGAGTAAGCTTCCTGAAG
CTGAGCATTGGTACATGGAATCATTGAGATCCAAGACGGACCACATCCCTGCTCATCTTACCTA
TGGGAAGCTGCTGGCGCTAACAGGTCGTAAGAGTGAGGCTGAAAAGTTCTTCTTGAAGGCTATT
GAGCTGGATCCTACCAAAGGAAACTGTTACATGCACTATGGTCAGTTTCTCCTGGAGGAATCTC
GCCTCACAGAAGCAGCCGAGATGGCAAAAAAAGCAGCTGAGCTGGACAGCACAGAGTTCGATGT
CGTCTTCAATGCTGCCCACATGCTCAGACAAGCTAGCCTCAATGAAGCTGCGGAGAAGTATTAC
GATCTTGCAGCAAGACTGAGACCTAATTACCCTGCTGCTCTCATGAACCTAGGGGCCATCCTAC
ATCTCAATGGGCGACTCCAGAAGGCTGAGGCCAACTACCTGAGGGCTCTGCAGCTCAAGCCGGA
TGATGTCATCACTCAGTCCAATCTCCGCAAGCTGTGGAACATCATGGAAAAGCAAGGCTTGAAG
ACCTCCAAGACCTGACACTCGAGAACTAGCCTCCTTCTCCTACGCTTGTCAAAGCTGGCTTCAT
TAACGGACAGATCTTCCCAGCAGTGCAGCGGTGATAAAACCTCACTGGAGATAACAAGCCCAGG
ACAGAGGTCATCATGGTTACCGCCACTGCTAGGAGAATCCACTTTGCTATGGGCACAGCCCTTA
ACACCAAAAAGGGGAACATTGAGAACCTCTGGGAGGGTGTAATTGTTACCCATAGACTGTAAAC
CAGAGCACTTAACAGGACTTTGGGGCGTTCTTAGAAGGGAGTGGGATCTCAGCTGCAGATGTTG
TTCACTTTTGAGGGAGAATTTGAAATTATATTGTTCCTTAAACACTGTGAGAGGAAGTCAGAGA
GCCCATCCAGCCACAGTGAACTCTTAAGGGGGTGATTAACACACAGTGTGAATCCCAGTGAGCC
ACCGGTTGTCCTTATGCTGCTTGATTGCTGAAGCTAATCAAACATTGGTTTTAACAGTGTGTCA
GGATCTGTCAGAATCTCCAGTTGTCTCTTGACTTGCTCATAA

hide sequence

RefSeq Acc Id:

XM_039078703 ⟹ XP_038934631

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	7	42,317,100 - 42,695,651 (-)	NCBI
mRatBN7.2	7	40,449,802 - 40,806,685 (-)	NCBI

RefSeq Acc Id:

XM_039078704 ⟹ XP_038934632

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	7	42,281,325 - 42,695,648 (-)	NCBI
mRatBN7.2	7	40,394,808 - 40,806,685 (-)	NCBI

RefSeq Acc Id:

XM_039078706 ⟹ XP_038934634

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	7	42,340,377 - 42,695,649 (-)	NCBI
mRatBN7.2	7	40,453,850 - 40,806,685 (-)	NCBI

Protein Sequences


Protein RefSeqs	NP_001164648	(Get FASTA)	NCBI Sequence Viewer
	XP_038934631	(Get FASTA)	NCBI Sequence Viewer
	XP_038934632	(Get FASTA)	NCBI Sequence Viewer
	XP_038934634	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	EDM16783	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSRNOP00000006086.7
	ENSRNOP00000086192.1
	ENSRNOP00000094183.1

RefSeq Acc Id:	NP_001164648 ⟸ NM_001171177
- Peptide Label:	precursor
- UniProtKB:	F1M369 (UniProtKB/TrEMBL), A6IGB5 (UniProtKB/TrEMBL)
- Sequence:	show sequence MIAELVSSALGLALYLNTLSADFCYDDSRAIKTNQDLLPETPWTHIFYNDFWGTLLTHSGSHKS YRPLCTLSFRLNHAIGGLNPWSYHLVNVLLHAAVTGLFTRFSKALLGDGYWTFMAGLMFASHPI HTEAVAGIVGRADVGASLFFLLSLLCYTKHCSTRGYSARTWGWFLGTGLCAGCSMLWKEQGVTV LAVSAVYDVFVFHRLKMRQILPTIYKRKNLSLFLSISLLTFWGTSLLGARLYWMGNKPPSFSNS DNPAADSDSLLARTLTFFYLPTKNLWLLLCPDTLSFDWSMDAVPLLKTVCDWRNLHTVAFYSGL LLLAYCGLKSPSLEGECNGKAVTNGKQNANGHSCYSDVEYRNSEIKPSFASKVENGIKSCVSQR PQLPSTENIVILSLSLLIIPFIPATNLFFYVGFVIAERVLYIPSMGFCLLITVGARALYVKVQK RFLKSLVFYATATLIVFYGLKTAIRNGDWQNEEMLYRSGIKVNPAKAWGNLGNVLKSQSKISEA EIAYRNALYYRSNMADMLYNLGLLLQENSRFAEALHYYKLAVGSRPTLASAYLNTGIILMNQGK TEEARRTFLKCSEIPDENLKDPHAHKSSVTSCLYNLGKLYHEQGRYEEALSVYREAIQKMPRQF APQSLYNMMGEAYMRLSKLPEAEHWYMESLRSKTDHIPAHLTYGKLLALTGRKSEAEKFFLKAI ELDPTKGNCYMHYGQFLLEESRLTEAAEMAKKAAELDSTEFDVVFNAAHMLRQASLNEAAEKYY DLAARLRPNYPAALMNLGAILHLNGRLQKAEANYLRALQLKPDDVITQSNLRKLWNIMEKQGLK TSKT hide sequence

Ensembl Acc Id:

ENSRNOP00000006086 ⟸ ENSRNOT00000006086

RefSeq Acc Id:	XP_038934632 ⟸ XM_039078704
- Peptide Label:	isoform X2
- UniProtKB:	A0A8I6ALM4 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038934631 ⟸ XM_039078703
- Peptide Label:	isoform X1
- UniProtKB:	A0A8I6A5J6 (UniProtKB/TrEMBL), A0A8I6ALM4 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038934634 ⟸ XM_039078706
- Peptide Label:	isoform X2
- UniProtKB:	A0A8I6ALM4 (UniProtKB/TrEMBL)

Ensembl Acc Id:

ENSRNOP00000094183 ⟸ ENSRNOT00000113359

Ensembl Acc Id:

ENSRNOP00000086192 ⟸ ENSRNOT00000093853

Protein Domains

DUF1736

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-F1M369-F1-model_v2	AlphaFold	F1M369	1-836	view protein structure

Transcriptome

eQTL		View at Phenogen
WGCNA		View at Phenogen
Tissue/Strain Expression		View at Phenogen

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	RGD:1309848	AgrOrtholog
BioCyc Gene	G2FUF-34194	BioCyc
BioCyc Pathway	PWY-7922 [protein O-mannosylation II (mammals, core M1 and core M2)]	BioCyc
	PWY-7979 [protein O-mannosylation III (mammals, core M3)]	BioCyc
BioCyc Pathway Image	PWY-7922	BioCyc
	PWY-7979	BioCyc
Ensembl Genes	ENSRNOG00000004585	Ensembl, UniProtKB/TrEMBL
Ensembl Transcript	ENSRNOT00000006086.7	UniProtKB/TrEMBL
	ENSRNOT00000093853.1	UniProtKB/TrEMBL
	ENSRNOT00000113359.1	UniProtKB/TrEMBL
Gene3D-CATH	1.25.40.10	UniProtKB/TrEMBL
InterPro	DUF1736	UniProtKB/TrEMBL
	TMTC_O-mannosyltransferase	UniProtKB/TrEMBL
	TPR-like_helical	UniProtKB/TrEMBL
	TPR_repeat	UniProtKB/TrEMBL
KEGG Report	rno:299762	UniProtKB/TrEMBL
NCBI Gene	299762	ENTREZGENE
PANTHER	PROTEIN O-MANNOSYL-TRANSFERASE TMTC2	UniProtKB/TrEMBL
	PROTEIN O-MANNOSYL-TRANSFERASE TMTC2	UniProtKB/TrEMBL
Pfam	DUF1736	UniProtKB/TrEMBL
	TPR_1	UniProtKB/TrEMBL
	TPR_12	UniProtKB/TrEMBL
	TPR_16	UniProtKB/TrEMBL
	TPR_8	UniProtKB/TrEMBL
PhenoGen	Tmtc2	PhenoGen
PROSITE	TPR	UniProtKB/TrEMBL
	TPR_REGION	UniProtKB/TrEMBL
RatGTEx	ENSRNOG00000004585	RatGTEx
SMART	TPR	UniProtKB/TrEMBL
Superfamily-SCOP	SSF48452	UniProtKB/TrEMBL
UniProt	A0A8I6A5J6	ENTREZGENE, UniProtKB/TrEMBL
	A0A8I6ALM4	ENTREZGENE, UniProtKB/TrEMBL
	A6IGB5	ENTREZGENE, UniProtKB/TrEMBL
	F1M369	ENTREZGENE, UniProtKB/TrEMBL

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2008-04-30	Tmtc2	transmembrane and tetratricopeptide repeat containing 2	Tmtc2_predicted	transmembrane and tetratricopeptide repeat containing 2 (predicted)	'predicted' is removed	2292626	APPROVED
2006-03-30	Tmtc2_predicted	transmembrane and tetratricopeptide repeat containing 2 (predicted)	RGD1309848_predicted	similar to RIKEN cDNA D330034A10 gene (predicted)	Symbol and Name updated	1299863	APPROVED
2005-01-20	RGD1309848_predicted	similar to RIKEN cDNA D330034A10 gene (predicted)	LOC299762_predicted		Symbol and Name status set to approved	1331353	APPROVED
2005-01-12	LOC299762_predicted	similar to RIKEN cDNA D330034A10 gene (predicted)			Symbol and Name status set to provisional	70820	PROVISIONAL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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Imported Disease Annotations - CTD

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