Gene: Cox6c (cytochrome c oxidase subunit 6C) Rattus norvegicus
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Symbol: Cox6c
Name: cytochrome c oxidase subunit 6C
Description: ENCODES a protein that exhibits cytochrome-c oxidase activity (inferred); INVOLVED IN electron transport chain (inferred); proton transmembrane transport (inferred); PARTICIPATES IN Alzheimer's disease pathway; Huntington's disease pathway; oxidative phosphorylation pathway; FOUND IN mitochondrion (ortholog); INTERACTS WITH 1,3-dinitrobenzene; 3H-1,2-dithiole-3-thione; ammonium chloride
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: COVIc; COX-VIc; Cox6c2; cytochrome c oxidase polypeptide VIc-2; cytochrome c oxidase subunit 6C-2; cytochrome c oxidase, subunit VIc; cytochrome oxidase subunit VIc
Orthologs:
Homo sapiens (human) : COX6C (cytochrome c oxidase subunit 6C)  HGNC  Alliance
Mus musculus (house mouse) : Cox6c (cytochrome c oxidase subunit 6C)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : LOC102014046 (cytochrome c oxidase subunit 6C)
Pan paniscus (bonobo/pygmy chimpanzee) : LOC100994763 (cytochrome c oxidase subunit 6C)
Canis lupus familiaris (dog) : LOC100683934 (cytochrome c oxidase subunit VIc pseudogene)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : LOC101970194 (cytochrome c oxidase subunit 6C)
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Related Pseudogenes: Cox6c-ps1  
Is Marker For: Strains:   SS.LEW-(D7Rat73-D7Rat128)/Ayd   LEW.SS-(D7Rat73-D7Rat128)/Ayd  
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0774,723,177 - 74,735,650 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.0774,880,032 - 74,892,505 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4771,465,790 - 71,478,524 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.1771,486,526 - 71,498,346 (-)NCBI
Celera764,212,107 - 64,224,807 (-)NCBICelera
Cytogenetic Map7q22NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
References - curated
References - uncurated
RGD Disease Portals

Genomics

Comparative Map Data
QTLs in Region (Rnor_6.0)
Related Rat Strains
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 5.0)
Damaging Variants

Additional Information

External Database Links
Nomenclature History
RGD Curation Notes
 
More on Cox6c
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 620616
Created: 2002-08-06
Species: Rattus norvegicus
Last Modified: 2018-12-11
Status: ACTIVE