Symbol:
Ctdsp2
Name:
CTD small phosphatase 2
RGD ID:
2319209
Description:
Predicted to enable RNA polymerase II CTD heptapeptide repeat phosphatase activity. Predicted to be involved in protein dephosphorylation. Predicted to act upstream of or within negative regulation of G1/S transition of mitotic cell cycle and negative regulation of protein phosphorylation. Orthologous to human CTDSP2 (CTD small phosphatase 2); PARTICIPATES IN Bone morphogenetic proteins signaling pathway; INTERACTS WITH (+)-schisandrin B; 2,3,7,8-tetrachlorodibenzodioxine; aflatoxin B1.
Type:
protein-coding
RefSeq Status:
VALIDATED
Previously known as:
carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 2; CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase 2; LOC100365370; nuclear LIM interactor-interacting factor 2-like
RGD Orthologs
Alliance Orthologs
More Info
more info ...
More Info
Species
Gene symbol and name
Data Source
Assertion derived from
less info ...
Orthologs 1
Homo sapiens (human):
CTDSP2 (CTD small phosphatase 2) HGNC
Ensembl, NCBI, OMA, OrthoDB, Panther
Mus musculus (house mouse):
Ctdsp2 (CTD small phosphatase 2) Transitive Ortholog Pipeline
Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):
Ctdsp2 (CTD small phosphatase 2) Transitive Ortholog Pipeline
Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):
CTDSP2 (CTD small phosphatase 2) Transitive Ortholog Pipeline
Transitive Ortholog Pipeline
Canis lupus familiaris (dog):
CTDSP2 (CTD small phosphatase 2) Transitive Ortholog Pipeline
Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):
Ctdsp2 (CTD small phosphatase 2) Transitive Ortholog Pipeline
Transitive Ortholog Pipeline
Sus scrofa (pig):
CTDSP2 (CTD small phosphatase 2) Transitive Ortholog Pipeline
Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):
CTDSP2 (CTD small phosphatase 2) Transitive Ortholog Pipeline
Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):
Ctdsp2 (CTD small phosphatase 2) Transitive Ortholog Pipeline
Transitive Ortholog Pipeline
Alliance orthologs 3
Homo sapiens (human):
CTDSP2 (CTD small phosphatase 2)
Alliance
DIOPT (Ensembl Compara|HGNC|Hieranoid|InParanoid|OMA|OrthoFinder|OrthoInspector|PANTHER|PhylomeDB|SonicParanoid)
Mus musculus (house mouse):
Ctdsp2 (CTD small phosphatase 2)
Alliance
DIOPT (Ensembl Compara|Hieranoid|InParanoid|OMA|OrthoFinder|OrthoInspector|PANTHER|PhylomeDB|SonicParanoid)
Danio rerio (zebrafish):
ctdsp2 (CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase 2)
Alliance
DIOPT (Ensembl Compara|Hieranoid|InParanoid|OMA|OrthoFinder|OrthoInspector|PANTHER|PhylomeDB|SonicParanoid)
Drosophila melanogaster (fruit fly):
CG5830
Alliance
DIOPT (Hieranoid|OrthoFinder|PhylomeDB)
Saccharomyces cerevisiae (baker's yeast):
PSR1
Alliance
DIOPT (Ensembl Compara|InParanoid|OrthoFinder|OrthoInspector|PANTHER|PhylomeDB|SonicParanoid)
Saccharomyces cerevisiae (baker's yeast):
PSR2
Alliance
DIOPT (Ensembl Compara|InParanoid|OrthoFinder|OrthoInspector|PANTHER|SonicParanoid)
Caenorhabditis elegans (roundworm):
scpl-1
Alliance
DIOPT (Hieranoid|InParanoid|OrthoFinder|OrthoInspector|SonicParanoid)
Xenopus tropicalis (tropical clawed frog):
ctdsp2
Alliance
DIOPT (Ensembl Compara|Hieranoid|InParanoid|OMA|OrthoFinder|OrthoInspector|PANTHER|PhylomeDB|SonicParanoid)
Latest Assembly:
GRCr8 - GRCr8 Assembly
Position:
Rat Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCr8 7 64,690,737 - 64,710,639 (+) NCBI GRCr8 mRatBN7.2 7 62,805,398 - 62,825,306 (+) NCBI mRatBN7.2 mRatBN7.2 mRatBN7.2 Ensembl 7 62,805,658 - 62,825,302 (+) Ensembl mRatBN7.2 Ensembl UTH_Rnor_SHR_Utx 7 64,694,709 - 64,714,611 (+) NCBI Rnor_SHR UTH_Rnor_SHR_Utx UTH_Rnor_SHRSP_BbbUtx_1.0 7 66,897,110 - 66,917,012 (+) NCBI Rnor_SHRSP UTH_Rnor_SHRSP_BbbUtx_1.0 UTH_Rnor_WKY_Bbb_1.0 7 66,698,365 - 66,718,268 (+) NCBI Rnor_WKY UTH_Rnor_WKY_Bbb_1.0 Rnor_6.0 7 70,283,683 - 70,291,795 (+) NCBI Rnor6.0 Rnor_6.0 rn6 Rnor6.0 Rnor_6.0 Ensembl 7 70,283,710 - 70,288,568 (+) Ensembl Rnor6.0 rn6 Rnor6.0 Rnor_5.0 7 70,460,026 - 70,468,044 (+) NCBI Rnor5.0 Rnor_5.0 rn5 Rnor5.0 Celera 7 59,964,189 - 59,969,458 (+) NCBI Celera Cytogenetic Map 7 q22 NCBI
JBrowse:
View Region in Genome Browser (JBrowse)
Model
Only show annotations with direct experimental evidence (0 objects hidden)
Ctdsp2 Rat (+)-schisandrin B multiple interactions EXP 6480464 schizandrin B inhibits the reaction [Carbon Tetrachloride results in decreased expression of CTDSP2 mRNA] CTD PMID:31150632 Ctdsp2 Rat 1,2-dichloroethane decreases expression ISO RGD:1620864 6480464 ethylene dichloride results in decreased expression of CTDSP2 mRNA CTD PMID:28960355 Ctdsp2 Rat 1,2-dimethylhydrazine decreases expression ISO RGD:1620864 6480464 1,2-Dimethylhydrazine results in decreased expression of CTDSP2 mRNA CTD PMID:22206623 Ctdsp2 Rat 17beta-estradiol affects expression ISO RGD:1342553 6480464 Estradiol affects the expression of CTDSP2 mRNA CTD PMID:22574217 Ctdsp2 Rat 17beta-estradiol decreases expression ISO RGD:1342553 6480464 Estradiol results in decreased expression of CTDSP2 mRNA CTD PMID:31614463 Ctdsp2 Rat 17beta-estradiol decreases expression ISO RGD:1620864 6480464 Estradiol results in decreased expression of CTDSP2 mRNA CTD PMID:39298647 Ctdsp2 Rat 2,3,7,8-tetrachlorodibenzodioxine affects expression ISO RGD:1620864 6480464 Tetrachlorodibenzodioxin affects the expression of CTDSP2 mRNA CTD PMID:21570461 Ctdsp2 Rat 2,3,7,8-tetrachlorodibenzodioxine decreases expression EXP 6480464 Tetrachlorodibenzodioxin results in decreased expression of CTDSP2 mRNA CTD PMID:33387578 Ctdsp2 Rat 2,3,7,8-tetrachlorodibenzodioxine increases expression EXP 6480464 Tetrachlorodibenzodioxin results in increased expression of CTDSP2 mRNA CTD PMID:32109520 Ctdsp2 Rat 2-bromohexadecanoic acid multiple interactions ISO RGD:1342553 6480464 2-bromopalmitate inhibits the reaction [[Cadmium Chloride results in increased abundance of Cadmium] which results in more ... CTD PMID:38195004 Ctdsp2 Rat 2-methylcholine affects expression ISO RGD:1342553 6480464 beta-methylcholine affects the expression of CTDSP2 mRNA CTD PMID:21179406 Ctdsp2 Rat 3,3',5,5'-tetrabromobisphenol A decreases expression ISO RGD:1620864 6480464 tetrabromobisphenol A results in decreased expression of CTDSP2 mRNA CTD PMID:25172293 Ctdsp2 Rat 4,4'-sulfonyldiphenol decreases expression ISO RGD:1620864 6480464 bisphenol S results in decreased expression of CTDSP2 mRNA CTD PMID:39298647 Ctdsp2 Rat 4,4'-sulfonyldiphenol affects methylation ISO RGD:1620864 6480464 bisphenol S affects the methylation of CTDSP2 gene CTD PMID:31683443 Ctdsp2 Rat acrolein multiple interactions ISO RGD:1342553 6480464 [Acrolein co-treated with methacrylaldehyde co-treated with Ozone] results in increased oxidation of CTDSP2 mRNA CTD PMID:32845096 Ctdsp2 Rat aflatoxin B1 increases methylation ISO RGD:1342553 6480464 Aflatoxin B1 results in increased methylation of CTDSP2 gene CTD PMID:27153756 Ctdsp2 Rat aflatoxin B1 decreases expression EXP 6480464 Aflatoxin B1 results in decreased expression of CTDSP2 mRNA CTD PMID:33354967 Ctdsp2 Rat Aflatoxin B2 alpha decreases methylation ISO RGD:1342553 6480464 aflatoxin B2 results in decreased methylation of CTDSP2 intron CTD PMID:30157460 Ctdsp2 Rat arsane affects methylation ISO RGD:1342553 6480464 Arsenic affects the methylation of CTDSP2 gene CTD PMID:25304211 Ctdsp2 Rat arsane multiple interactions ISO RGD:1342553 6480464 [[sodium arsenite results in increased abundance of Arsenic] co-treated with [manganese chloride results in increased more ... CTD PMID:39836092 Ctdsp2 Rat arsenic atom affects methylation ISO RGD:1342553 6480464 Arsenic affects the methylation of CTDSP2 gene CTD PMID:25304211 Ctdsp2 Rat arsenic atom multiple interactions ISO RGD:1342553 6480464 [[sodium arsenite results in increased abundance of Arsenic] co-treated with [manganese chloride results in increased more ... CTD PMID:39836092 Ctdsp2 Rat benzo[a]pyrene increases methylation ISO RGD:1620864 6480464 Benzo(a)pyrene results in increased methylation of CTDSP2 promoter CTD PMID:27901495 Ctdsp2 Rat benzo[a]pyrene increases methylation ISO RGD:1342553 6480464 Benzo(a)pyrene results in increased methylation of CTDSP2 promoter CTD PMID:27901495 Ctdsp2 Rat benzo[a]pyrene diol epoxide I decreases expression ISO RGD:1342553 6480464 7,8-Dihydro-7,8-dihydroxybenzo(a)pyrene 9,10-oxide results in decreased expression of CTDSP2 mRNA CTD PMID:19150397 Ctdsp2 Rat benzo[e]pyrene decreases methylation ISO RGD:1342553 6480464 benzo(e)pyrene results in decreased methylation of CTDSP2 intron CTD PMID:30157460 Ctdsp2 Rat bisphenol A decreases methylation ISO RGD:1620864 6480464 bisphenol A results in decreased methylation of CTDSP2 promoter CTD PMID:27312807 Ctdsp2 Rat bisphenol A increases expression ISO RGD:1620864 6480464 bisphenol A results in increased expression of CTDSP2 mRNA CTD PMID:32156529 Ctdsp2 Rat bisphenol A decreases expression EXP 6480464 bisphenol A results in decreased expression of CTDSP2 mRNA CTD PMID:32145629 Ctdsp2 Rat bisphenol A affects expression EXP 6480464 bisphenol A affects the expression of CTDSP2 mRNA CTD PMID:30816183 Ctdsp2 Rat cadmium atom multiple interactions ISO RGD:1342553 6480464 2-bromopalmitate inhibits the reaction [[Cadmium Chloride results in increased abundance of Cadmium] which results in more ... CTD PMID:38195004 Ctdsp2 Rat cadmium dichloride decreases expression ISO RGD:1342553 6480464 Cadmium Chloride results in decreased expression of CTDSP2 mRNA CTD PMID:38568856 Ctdsp2 Rat cadmium dichloride multiple interactions ISO RGD:1342553 6480464 2-bromopalmitate inhibits the reaction [[Cadmium Chloride results in increased abundance of Cadmium] which results in more ... CTD PMID:38195004 Ctdsp2 Rat carbon nanotube increases expression ISO RGD:1620864 6480464 Nanotubes, Carbon analog results in increased expression of CTDSP2 mRNA CTD PMID:25620056 Ctdsp2 Rat carbon nanotube decreases expression ISO RGD:1620864 6480464 Nanotubes, Carbon analog results in decreased expression of CTDSP2 mRNA CTD PMID:25554681 Ctdsp2 Rat CGP 52608 multiple interactions ISO RGD:1342553 6480464 CGP 52608 promotes the reaction [RORA protein binds to CTDSP2 gene] CTD PMID:28238834 Ctdsp2 Rat chlorpyrifos decreases expression ISO RGD:1620864 6480464 Chlorpyrifos results in decreased expression of CTDSP2 mRNA CTD PMID:32715474 Ctdsp2 Rat chromium(6+) affects expression ISO RGD:1620864 6480464 chromium hexavalent ion affects the expression of CTDSP2 mRNA CTD PMID:28472532 Ctdsp2 Rat clofibrate decreases expression ISO RGD:1620864 6480464 Clofibrate results in decreased expression of CTDSP2 mRNA CTD PMID:23811191 Ctdsp2 Rat cyclosporin A increases expression ISO RGD:1342553 6480464 Cyclosporine results in increased expression of CTDSP2 mRNA CTD PMID:25562108 Ctdsp2 Rat dorsomorphin multiple interactions ISO RGD:1342553 6480464 [NOG protein co-treated with Phenylmercuric Acetate co-treated with dorsomorphin co-treated with 4-(5-benzo(1,3)dioxol-5-yl-4-pyridin-2-yl-1H-imidazol-2-yl)benzamide] results in decreased more ... CTD PMID:27188386 Ctdsp2 Rat doxorubicin increases expression ISO RGD:1342553 6480464 Doxorubicin results in increased expression of CTDSP2 mRNA CTD PMID:29803840 Ctdsp2 Rat ethanol affects splicing ISO RGD:1620864 6480464 Ethanol affects the splicing of CTDSP2 mRNA CTD PMID:30319688 Ctdsp2 Rat flusilazole affects expression ISO RGD:1620864 6480464 flusilazole affects the expression of CTDSP2 mRNA CTD PMID:21195148 Ctdsp2 Rat FR900359 decreases phosphorylation ISO RGD:1342553 6480464 FR900359 results in decreased phosphorylation of CTDSP2 protein CTD PMID:37730182 Ctdsp2 Rat hexaconazole affects expression ISO RGD:1620864 6480464 hexaconazole affects the expression of CTDSP2 mRNA CTD PMID:21195148 Ctdsp2 Rat lipopolysaccharide decreases expression ISO RGD:1620864 6480464 Lipopolysaccharides results in decreased expression of CTDSP2 mRNA CTD PMID:25890327 Ctdsp2 Rat manganese atom multiple interactions ISO RGD:1342553 6480464 [[sodium arsenite results in increased abundance of Arsenic] co-treated with [manganese chloride results in increased more ... CTD PMID:39836092 Ctdsp2 Rat manganese(0) multiple interactions ISO RGD:1342553 6480464 [[sodium arsenite results in increased abundance of Arsenic] co-treated with [manganese chloride results in increased more ... CTD PMID:39836092 Ctdsp2 Rat manganese(II) chloride multiple interactions ISO RGD:1342553 6480464 [[sodium arsenite results in increased abundance of Arsenic] co-treated with [manganese chloride results in increased more ... CTD PMID:39836092 Ctdsp2 Rat metformin decreases expression EXP 6480464 Metformin results in decreased expression of CTDSP2 mRNA CTD PMID:31324951 Ctdsp2 Rat methapyrilene decreases methylation ISO RGD:1342553 6480464 Methapyrilene results in decreased methylation of CTDSP2 intron CTD PMID:30157460 Ctdsp2 Rat methyl methanesulfonate decreases expression ISO RGD:1342553 6480464 Methyl Methanesulfonate results in decreased expression of CTDSP2 mRNA CTD PMID:23649840 Ctdsp2 Rat Methylazoxymethanol acetate decreases expression EXP 6480464 Methylazoxymethanol Acetate results in decreased expression of CTDSP2 mRNA CTD PMID:28349193 Ctdsp2 Rat Mono-carboxy isooctyl phthalate affects expression ISO RGD:1342553 6480464 mono(carboxy-isooctyl)phthalate affects the expression of CTDSP2 mRNA CTD PMID:34478338 Ctdsp2 Rat N,N,N',N'-tetrakis(2-pyridylmethyl)ethylenediamine decreases expression ISO RGD:1342553 6480464 N,N,N',N'-tetrakis(2-pyridylmethyl)ethylenediamine results in decreased expression of CTDSP2 mRNA CTD PMID:12756304 Ctdsp2 Rat nickel atom increases expression ISO RGD:1342553 6480464 Nickel results in increased expression of CTDSP2 mRNA CTD PMID:24768652|PMID:25583101 Ctdsp2 Rat okadaic acid decreases expression ISO RGD:1342553 6480464 Okadaic Acid results in decreased expression of CTDSP2 mRNA CTD PMID:38832940 Ctdsp2 Rat ozone multiple interactions ISO RGD:1342553 6480464 [Acrolein co-treated with methacrylaldehyde co-treated with Ozone] results in increased oxidation of CTDSP2 mRNA CTD PMID:32845096 Ctdsp2 Rat paracetamol decreases expression ISO RGD:1342553 6480464 Acetaminophen results in decreased expression of CTDSP2 mRNA CTD PMID:21420995 Ctdsp2 Rat paracetamol decreases expression EXP 6480464 Acetaminophen results in decreased expression of CTDSP2 mRNA CTD PMID:33387578 Ctdsp2 Rat paracetamol affects expression ISO RGD:1620864 6480464 Acetaminophen affects the expression of CTDSP2 mRNA CTD PMID:17562736 Ctdsp2 Rat phenylmercury acetate decreases expression ISO RGD:1342553 6480464 Phenylmercuric Acetate results in decreased expression of CTDSP2 mRNA CTD PMID:26272509 Ctdsp2 Rat phenylmercury acetate multiple interactions ISO RGD:1342553 6480464 [NOG protein co-treated with Phenylmercuric Acetate co-treated with dorsomorphin co-treated with 4-(5-benzo(1,3)dioxol-5-yl-4-pyridin-2-yl-1H-imidazol-2-yl)benzamide] results in decreased more ... CTD PMID:27188386 Ctdsp2 Rat propiconazole decreases expression ISO RGD:1620864 6480464 propiconazole results in decreased expression of CTDSP2 mRNA CTD PMID:21278054 Ctdsp2 Rat SB 431542 multiple interactions ISO RGD:1342553 6480464 [NOG protein co-treated with Phenylmercuric Acetate co-treated with dorsomorphin co-treated with 4-(5-benzo(1,3)dioxol-5-yl-4-pyridin-2-yl-1H-imidazol-2-yl)benzamide] results in decreased more ... CTD PMID:27188386 Ctdsp2 Rat silicon dioxide decreases expression ISO RGD:1342553 6480464 Silicon Dioxide analog results in decreased expression of CTDSP2 mRNA CTD PMID:25895662 Ctdsp2 Rat sodium arsenite decreases expression ISO RGD:1620864 6480464 sodium arsenite results in decreased expression of CTDSP2 mRNA CTD PMID:25270620 Ctdsp2 Rat sodium arsenite multiple interactions ISO RGD:1342553 6480464 [[sodium arsenite results in increased abundance of Arsenic] co-treated with [manganese chloride results in increased more ... CTD PMID:39836092 Ctdsp2 Rat sunitinib increases expression ISO RGD:1342553 6480464 Sunitinib results in increased expression of CTDSP2 mRNA CTD PMID:31533062 Ctdsp2 Rat temozolomide decreases expression ISO RGD:1342553 6480464 Temozolomide results in decreased expression of CTDSP2 mRNA CTD PMID:31758290 Ctdsp2 Rat tetrachloroethene increases expression ISO RGD:1620864 6480464 Tetrachloroethylene results in increased expression of CTDSP2 mRNA CTD PMID:28973375 Ctdsp2 Rat tetrachloromethane multiple interactions ISO RGD:1620864 6480464 PLG gene mutant form promotes the reaction [Carbon Tetrachloride results in increased expression of CTDSP2 more ... CTD PMID:16006527 Ctdsp2 Rat tetrachloromethane multiple interactions EXP 6480464 schizandrin B inhibits the reaction [Carbon Tetrachloride results in decreased expression of CTDSP2 mRNA] CTD PMID:31150632 Ctdsp2 Rat tetrachloromethane decreases expression EXP 6480464 Carbon Tetrachloride results in decreased expression of CTDSP2 mRNA CTD PMID:31150632|PMID:33387578 Ctdsp2 Rat triadimefon affects expression ISO RGD:1620864 6480464 triadimefon affects the expression of CTDSP2 mRNA CTD PMID:21195148 Ctdsp2 Rat triphenyl phosphate affects expression ISO RGD:1342553 6480464 triphenyl phosphate affects the expression of CTDSP2 mRNA CTD PMID:37042841 Ctdsp2 Rat troglitazone decreases expression ISO RGD:1620864 6480464 troglitazone results in decreased expression of CTDSP2 mRNA CTD PMID:28973697 Ctdsp2 Rat urethane increases expression ISO RGD:1342553 6480464 Urethane results in increased expression of CTDSP2 mRNA CTD PMID:28818685 Ctdsp2 Rat valproic acid affects expression ISO RGD:1620864 6480464 Valproic Acid affects the expression of CTDSP2 mRNA CTD PMID:17292431 Ctdsp2 Rat valproic acid decreases expression ISO RGD:1342553 6480464 Valproic Acid results in decreased expression of CTDSP2 mRNA CTD PMID:23179753|PMID:28001369 Ctdsp2 Rat valproic acid decreases methylation ISO RGD:1342553 6480464 Valproic Acid results in decreased methylation of CTDSP2 gene CTD PMID:29154799
Imported Annotations - PID (archival)
(+)-schisandrin B (EXP) 1,2-dichloroethane (ISO) 1,2-dimethylhydrazine (ISO) 17beta-estradiol (ISO) 2,3,7,8-tetrachlorodibenzodioxine (EXP,ISO) 2-bromohexadecanoic acid (ISO) 2-methylcholine (ISO) 3,3',5,5'-tetrabromobisphenol A (ISO) 4,4'-sulfonyldiphenol (ISO) acrolein (ISO) aflatoxin B1 (EXP,ISO) Aflatoxin B2 alpha (ISO) arsane (ISO) arsenic atom (ISO) benzo[a]pyrene (ISO) benzo[a]pyrene diol epoxide I (ISO) benzo[e]pyrene (ISO) bisphenol A (EXP,ISO) cadmium atom (ISO) cadmium dichloride (ISO) carbon nanotube (ISO) CGP 52608 (ISO) chlorpyrifos (ISO) chromium(6+) (ISO) clofibrate (ISO) cyclosporin A (ISO) dorsomorphin (ISO) doxorubicin (ISO) ethanol (ISO) flusilazole (ISO) FR900359 (ISO) hexaconazole (ISO) lipopolysaccharide (ISO) manganese atom (ISO) manganese(0) (ISO) manganese(II) chloride (ISO) metformin (EXP) methapyrilene (ISO) methyl methanesulfonate (ISO) Methylazoxymethanol acetate (EXP) Mono-carboxy isooctyl phthalate (ISO) N,N,N',N'-tetrakis(2-pyridylmethyl)ethylenediamine (ISO) nickel atom (ISO) okadaic acid (ISO) ozone (ISO) paracetamol (EXP,ISO) phenylmercury acetate (ISO) propiconazole (ISO) SB 431542 (ISO) silicon dioxide (ISO) sodium arsenite (ISO) sunitinib (ISO) temozolomide (ISO) tetrachloroethene (ISO) tetrachloromethane (EXP,ISO) triadimefon (ISO) triphenyl phosphate (ISO) troglitazone (ISO) urethane (ISO) valproic acid (ISO)
Ctdsp2 Rat Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCr8 7 64,690,737 - 64,710,639 (+) NCBI GRCr8 mRatBN7.2 7 62,805,398 - 62,825,306 (+) NCBI mRatBN7.2 mRatBN7.2 mRatBN7.2 Ensembl 7 62,805,658 - 62,825,302 (+) Ensembl mRatBN7.2 Ensembl UTH_Rnor_SHR_Utx 7 64,694,709 - 64,714,611 (+) NCBI Rnor_SHR UTH_Rnor_SHR_Utx UTH_Rnor_SHRSP_BbbUtx_1.0 7 66,897,110 - 66,917,012 (+) NCBI Rnor_SHRSP UTH_Rnor_SHRSP_BbbUtx_1.0 UTH_Rnor_WKY_Bbb_1.0 7 66,698,365 - 66,718,268 (+) NCBI Rnor_WKY UTH_Rnor_WKY_Bbb_1.0 Rnor_6.0 7 70,283,683 - 70,291,795 (+) NCBI Rnor6.0 Rnor_6.0 rn6 Rnor6.0 Rnor_6.0 Ensembl 7 70,283,710 - 70,288,568 (+) Ensembl Rnor6.0 rn6 Rnor6.0 Rnor_5.0 7 70,460,026 - 70,468,044 (+) NCBI Rnor5.0 Rnor_5.0 rn5 Rnor5.0 Celera 7 59,964,189 - 59,969,458 (+) NCBI Celera Cytogenetic Map 7 q22 NCBI
CTDSP2 Human Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCh38 12 57,819,927 - 57,846,729 (-) NCBI GRCh38 GRCh38 hg38 GRCh38 GRCh38.p14 Ensembl 12 57,819,927 - 57,846,729 (-) Ensembl GRCh38 hg38 GRCh38 GRCh37 12 58,213,710 - 58,240,512 (-) NCBI GRCh37 GRCh37 hg19 GRCh37 Build 36 12 56,499,977 - 56,527,014 (-) NCBI NCBI36 Build 36 hg18 NCBI36 Build 34 12 56,499,978 - 56,526,789 NCBI Celera 12 57,871,630 - 57,898,666 (-) NCBI Celera Cytogenetic Map 12 q14.1 NCBI HuRef 12 55,250,675 - 55,277,708 (-) NCBI HuRef CHM1_1 12 58,181,469 - 58,208,506 (-) NCBI CHM1_1 T2T-CHM13v2.0 12 57,788,296 - 57,815,097 (-) NCBI T2T-CHM13v2.0
Ctdsp2 Mouse Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCm39 10 126,814,586 - 126,835,844 (+) NCBI GRCm39 GRCm39 mm39 GRCm39 Ensembl 10 126,814,586 - 126,835,844 (+) Ensembl GRCm39 Ensembl GRCm38 10 126,978,717 - 126,999,975 (+) NCBI GRCm38 GRCm38 mm10 GRCm38 GRCm38.p6 Ensembl 10 126,978,717 - 126,999,975 (+) Ensembl GRCm38 mm10 GRCm38 MGSCv37 10 126,415,773 - 126,437,031 (+) NCBI GRCm37 MGSCv37 mm9 NCBIm37 MGSCv36 10 126,398,561 - 126,402,918 (+) NCBI MGSCv36 mm8 Celera 10 129,370,578 - 129,391,937 (+) NCBI Celera Cytogenetic Map 10 D3 NCBI cM Map 10 74.35 NCBI
Ctdsp2 Chinchilla Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl ChiLan1.0 Ensembl NW_004955458 5,523,548 - 5,549,398 (-) Ensembl ChiLan1.0 ChiLan1.0 NW_004955458 5,523,548 - 5,549,190 (-) NCBI ChiLan1.0 ChiLan1.0
CTDSP2 Bonobo Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl NHGRI_mPanPan1-v2 10 36,493,787 - 36,520,919 (+) NCBI NHGRI_mPanPan1-v2 NHGRI_mPanPan1 12 36,490,567 - 36,517,684 (+) NCBI NHGRI_mPanPan1 Mhudiblu_PPA_v0 12 31,079,686 - 31,106,789 (+) NCBI Mhudiblu_PPA_v0 Mhudiblu_PPA_v0 panPan3 PanPan1.1 12 31,340,308 - 31,367,164 (+) NCBI panpan1.1 PanPan1.1 panPan2 PanPan1.1 Ensembl 12 31,340,313 - 31,367,164 (+) Ensembl panpan1.1 panPan2
CTDSP2 Dog Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl CanFam3.1 10 1,875,307 - 1,898,385 (-) NCBI CanFam3.1 CanFam3.1 canFam3 CanFam3.1 CanFam3.1 Ensembl 10 1,876,536 - 1,898,348 (-) Ensembl CanFam3.1 canFam3 CanFam3.1 Dog10K_Boxer_Tasha 10 1,938,082 - 1,960,869 (-) NCBI Dog10K_Boxer_Tasha ROS_Cfam_1.0 10 1,884,550 - 1,907,344 (-) NCBI ROS_Cfam_1.0 ROS_Cfam_1.0 Ensembl 10 1,884,618 - 1,907,270 (-) Ensembl ROS_Cfam_1.0 Ensembl UMICH_Zoey_3.1 10 1,862,042 - 1,885,087 (-) NCBI UMICH_Zoey_3.1 UNSW_CanFamBas_1.0 10 2,104,263 - 2,127,308 (-) NCBI UNSW_CanFamBas_1.0 UU_Cfam_GSD_1.0 10 2,228,959 - 2,252,119 (-) NCBI UU_Cfam_GSD_1.0
Ctdsp2 Squirrel Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl HiC_Itri_2 NW_024404945 56,892,954 - 56,918,112 (+) NCBI HiC_Itri_2 SpeTri2.0 Ensembl NW_004936646 1,952,123 - 1,977,337 (-) Ensembl SpeTri2.0 SpeTri2.0 Ensembl SpeTri2.0 NW_004936646 1,952,123 - 1,977,279 (-) NCBI SpeTri2.0 SpeTri2.0 SpeTri2.0
CTDSP2
CTDSP2 Green Monkey Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl ChlSab1.1 11 53,733,041 - 53,759,809 (-) NCBI ChlSab1.1 ChlSab1.1 chlSab2 ChlSab1.1 Ensembl 11 53,736,699 - 53,742,750 (-) Ensembl ChlSab1.1 ChlSab1.1 Ensembl chlSab2 Vero_WHO_p1.0 NW_023666037 192,201,834 - 192,228,574 (+) NCBI Vero_WHO_p1.0 Vero_WHO_p1.0
Ctdsp2
.
Predicted Target Of
Count of predictions: 37 Count of miRNA genes: 33 Interacting mature miRNAs: 36 Transcripts: ENSRNOT00000075371 Prediction methods: Miranda, Rnahybrid, Targetscan Result types: miRGate_prediction
7411569 Bw137 Body weight QTL 137 0.001 body mass (VT:0001259) body weight gain (CMO:0000420) 7 21921195 66921195 Rat 1300179 Kidm5 Kidney mass QTL 5 3.51 kidney mass (VT:0002707) left kidney wet weight (CMO:0000083) 7 43747012 135012528 Rat 2293667 Bss42 Bone structure and strength QTL 42 7.25 0.0001 lumbar vertebra size trait (VT:0010518) lumbar vertebra cross-sectional area (CMO:0001689) 7 47651439 92651439 Rat 10053722 Scort27 Serum corticosterone level QTL 27 2.41 0.0083 blood corticosterone amount (VT:0005345) plasma corticosterone level (CMO:0001173) 7 43228750 88228750 Rat 1641885 Alcrsp9 Alcohol response QTL 9 alcohol metabolism trait (VT:0015089) blood ethanol level (CMO:0000535) 7 24099606 69099606 Rat 1549840 Bss5 Bone structure and strength QTL 5 9.8 femur strength trait (VT:0010010) femur midshaft polar moment of inertia (CMO:0001669) 7 24751841 69751841 Rat 2317035 Aia16 Adjuvant induced arthritis QTL 16 2.71 joint integrity trait (VT:0010548) right rear ankle joint diameter (CMO:0002150) 7 59238038 104238038 Rat 1300127 Srn1 Serum renin concentration QTL 1 3.87 blood renin amount (VT:0003349) plasma renin activity level (CMO:0000116) 7 29409683 84928080 Rat 10059605 Kidm47 Kidney mass QTL 47 2.91 0.05 kidney mass (VT:0002707) both kidneys wet weight to body weight ratio (CMO:0000340) 7 47251783 65728867 Rat 2293678 Bss24 Bone structure and strength QTL 24 6.71 0.0001 femur morphology trait (VT:0000559) femur cross-sectional area (CMO:0001661) 7 47651439 92651439 Rat 1358361 Sradr5 Stress Responsive Adrenal Weight QTL 5 5.55 adrenal gland mass (VT:0010420) both adrenal glands wet weight (CMO:0000164) 7 43747012 108555253 Rat 631513 Scl7 Serum cholesterol level QTL 7 4.1 blood cholesterol amount (VT:0000180) serum total cholesterol level (CMO:0000363) 7 37960569 82960569 Rat 2293685 Bmd21 Bone mineral density QTL 21 4.2 0.0003 femur mineral mass (VT:0010011) total volumetric bone mineral density (CMO:0001728) 7 47651439 92651439 Rat 10755453 Coatc12 Coat color QTL 12 0 coat/hair pigmentation trait (VT:0010463) pigmented ventral coat/hair area to total ventral coat/hair area ratio (CMO:0001812) 7 31112832 76112832 Rat 631504 Cm27 Cardiac mass QTL 27 3.45 heart left ventricle mass (VT:0007031) heart left ventricle wet weight (CMO:0000071) 7 44421311 118198041 Rat 10755451 Coatc11 Coat color QTL 11 0 coat/hair pigmentation trait (VT:0010463) pigmented ventral coat/hair area to total ventral coat/hair area ratio (CMO:0001812) 7 17944357 62944357 Rat 634326 Hc3 Hypercalciuria QTL 3 2.1 urine calcium amount (VT:0002985) urine calcium excretion rate (CMO:0000763) 7 42787314 87787314 Rat 2293696 Bmd32 Bone mineral density QTL 32 5.1 0.0001 femur strength trait (VT:0010010) femoral neck polar moment of inertia (CMO:0001670) 7 47651439 92651439 Rat 7411605 Foco14 Food consumption QTL 14 24.1 0.001 eating behavior trait (VT:0001431) feed conversion ratio (CMO:0001312) 7 34293282 79293282 Rat 1300151 Bp181 Blood pressure QTL 181 3.36 arterial blood pressure trait (VT:2000000) diastolic blood pressure (CMO:0000005) 7 53612714 103945643 Rat 1559283 Emca4 Estrogen-induced mammary cancer QTL 4 3.7 mammary gland integrity trait (VT:0010552) percentage of study population developing mammary tumors during a period of time (CMO:0000948) 7 62004452 101773158 Rat 1643004 Pain2 Pain QTL 2 1 mechanical nociception trait (VT:0002734) self mutilation severity score (CMO:0002145) 7 9462246 98011544 Rat 738030 Anxrr8 Anxiety related response QTL 8 4.1 exploratory behavior trait (VT:0010471) number of entries into a discrete space in an experimental apparatus (CMO:0000960) 7 46590070 91590070 Rat 1300149 Cm6 Cardiac mass QTL 6 4.09 heart mass (VT:0007028) heart left ventricle weight to body weight ratio (CMO:0000530) 7 43747099 102228765 Rat 631534 Lnnr1 Liver neoplastic nodule remodeling QTL 1 3.85 0.001 liver integrity trait (VT:0010547) liver remodeling tumorous lesion number to liver total tumorous lesion number ratio (CMO:0001705) 7 34293282 79293282 Rat 634336 Anxrr17 Anxiety related response QTL 17 3.66 locomotor behavior trait (VT:0001392) number of entries into a discrete space in an experimental apparatus (CMO:0000960) 7 924703 115097879 Rat 2293707 Bss32 Bone structure and strength QTL 32 7.64 0.0001 femur strength trait (VT:0010010) femur midshaft polar moment of inertia (CMO:0001669) 7 47651439 92651439 Rat 61357 Bp38 Blood pressure QTL 38 1.6 0.052 arterial blood pressure trait (VT:2000000) systolic blood pressure (CMO:0000004) 7 41333674 119109060 Rat 2293644 Bmd29 Bone mineral density QTL 29 5.4 0.0001 femur size trait (VT:1000369) femoral neck cross-sectional area (CMO:0001697) 7 47651439 92651439 Rat 70190 Mcs6 Mammary carcinoma susceptibility QTL 6 2.29 mammary gland integrity trait (VT:0010552) mammary tumor number (CMO:0000343) 7 26737401 63902784 Rat 2300178 Bmd54 Bone mineral density QTL 54 5.3 0.0001 femur mineral mass (VT:0010011) volumetric bone mineral density (CMO:0001553) 7 47651439 92651439 Rat 1298528 Bp169 Blood pressure QTL 169 0.0001 arterial blood pressure trait (VT:2000000) systolic blood pressure (CMO:0000004) 7 61074194 106074194 Rat 61428 Scl3 Serum cholesterol level QTL 3 3.2 blood cholesterol amount (VT:0000180) serum total cholesterol level (CMO:0000363) 7 44867533 89867533 Rat 1300132 Bp182 Blood pressure QTL 182 3.49 arterial blood pressure trait (VT:2000000) blood pressure time series experimental set point of the baroreceptor response (CMO:0002593) 7 19654317 84928080 Rat 1576303 Ept7 Estrogen-induced pituitary tumorigenesis QTL 7 3.7 pituitary gland mass (VT:0010496) pituitary gland wet weight (CMO:0000853) 7 62004452 101773158 Rat 10402855 Bp379 Blood pressure QTL 379 0.21 arterial blood pressure trait (VT:2000000) mean arterial blood pressure (CMO:0000009) 7 29409683 74409683 Rat
Click on a value in the shaded box below the category label to view a detailed expression data table for that system.
alimentary part of gastrointestinal system
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Ensembl Acc Id:
ENSRNOT00000075371 ⟹ ENSRNOP00000064803
Type:
CODING
Position:
Rat Assembly Chr Position (strand) Source mRatBN7.2 Ensembl 7 62,805,658 - 62,822,579 (+) Ensembl Rnor_6.0 Ensembl 7 70,283,710 - 70,288,568 (+) Ensembl
Ensembl Acc Id:
ENSRNOT00000105207 ⟹ ENSRNOP00000082723
Type:
CODING
Position:
Rat Assembly Chr Position (strand) Source mRatBN7.2 Ensembl 7 62,812,315 - 62,825,302 (+) Ensembl
RefSeq Acc Id:
NM_001398613 ⟹ NP_001385542
RefSeq Status:
VALIDATED
Type:
CODING
Position:
Rat Assembly Chr Position (strand) Source GRCr8 7 64,690,737 - 64,710,639 (+) NCBI mRatBN7.2 7 62,805,398 - 62,825,306 (+) NCBI
Ensembl Acc Id:
ENSRNOP00000064803 ⟸ ENSRNOT00000075371
Ensembl Acc Id:
ENSRNOP00000082723 ⟸ ENSRNOT00000105207
RefSeq Acc Id:
NP_001385542 ⟸ NM_001398613
- UniProtKB:
A0A8I5ZV44 (UniProtKB/TrEMBL)
Date
Current Symbol
Current Name
Previous Symbol
Previous Name
Description
Reference
Status
2022-06-02
Ctdsp2
CTD small phosphatase 2
Ctdsp2
CTD small phosphatase 2
Data merged from RGD:149736519
737654 PROVISIONAL
2021-08-09
Ctdsp2
CTD small phosphatase 2
Symbol and Name status set to provisional
45752 PROVISIONAL
2015-11-12
Ctdsp2
CTD small phosphatase 2
Ctdsp2
CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase 2
Nomenclature updated to reflect human and mouse nomenclature
1299863 APPROVED
2013-08-08
Ctdsp2
CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase 2
LOC100365370
nuclear LIM interactor-interacting factor 2-like
Nomenclature updated to reflect human and mouse nomenclature
1299863 APPROVED
2010-05-05
LOC100365370
nuclear LIM interactor-interacting factor 2-like
Symbol and Name status set to provisional
70820 PROVISIONAL
