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Gene: CTDSP2 (CTD small phosphatase 2) Homo sapiens

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Symbol:

CTDSP2

Name:

CTD small phosphatase 2

RGD ID:

1342553

HGNC Page

HGNC:17077

Description:

Enables RNA polymerase II CTD heptapeptide repeat phosphatase activity. Involved in protein dephosphorylation. Predicted to be located in nucleoplasm.

Type:

protein-coding

RefSeq Status:

VALIDATED

Previously known as:

carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 2; conserved gene amplified in osteosarcoma; CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase 2; NLI-interacting factor 2; nuclear LIM interactor-interacting factor 2; OS4; protein OS-4; PSR2; SCP2; small C-terminal domain phosphatase 2; small CTD phosphatase 2

RGD Orthologs

Alliance Orthologs

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Mus musculus (house mouse):	Ctdsp2 (CTD small phosphatase 2)	HGNC	EggNOG, Ensembl, HGNC, HomoloGene, Inparanoid, NCBI, OMA, OrthoDB, Panther, PhylomeDB, Treefam
Rattus norvegicus (Norway rat):	Ctdsp2 (CTD small phosphatase 2)	HGNC	Ensembl, NCBI, OMA, OrthoDB, Panther
Chinchilla lanigera (long-tailed chinchilla):	Ctdsp2 (CTD small phosphatase 2)	NCBI	Ortholog
Pan paniscus (bonobo/pygmy chimpanzee):	CTDSP2 (CTD small phosphatase 2)	NCBI	Ortholog
Canis lupus familiaris (dog):	CTDSP2 (CTD small phosphatase 2)	HGNC	EggNOG, Ensembl, HomoloGene, Inparanoid, NCBI, OMA, OrthoDB, Panther, Treefam
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Ctdsp2 (CTD small phosphatase 2)	NCBI	Ortholog
Sus scrofa (pig):	CTDSP2 (CTD small phosphatase 2)	HGNC	Ensembl, Inparanoid, NCBI, OrthoDB
Chlorocebus sabaeus (green monkey):	CTDSP2 (CTD small phosphatase 2)	NCBI	Ortholog
Heterocephalus glaber (naked mole-rat):	Ctdsp2 (CTD small phosphatase 2)	NCBI	Ortholog
Alliance orthologs ³
Mus musculus (house mouse):	Ctdsp2 (CTD small phosphatase 2)	Alliance	DIOPT (Ensembl Compara\|HGNC\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Rattus norvegicus (Norway rat):	Ctdsp2 (CTD small phosphatase 2)	Alliance	DIOPT (Ensembl Compara\|HGNC\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Danio rerio (zebrafish):	ctdsp2 (CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase 2)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid\|ZFIN)
Drosophila melanogaster (fruit fly):	CG5830	Alliance	DIOPT (Hieranoid\|OrthoFinder\|OrthoInspector\|PhylomeDB)
Saccharomyces cerevisiae (baker's yeast):	PSR1	Alliance	DIOPT (Ensembl Compara\|InParanoid\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Saccharomyces cerevisiae (baker's yeast):	PSR2	Alliance	DIOPT (Ensembl Compara\|InParanoid\|OrthoFinder\|OrthoInspector\|PANTHER\|SonicParanoid)
Caenorhabditis elegans (roundworm):	scpl-1	Alliance	DIOPT (Hieranoid\|InParanoid\|OrthoFinder\|OrthoInspector\|SonicParanoid)
Xenopus tropicalis (tropical clawed frog):	ctdsp2	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Xenopus laevis (African clawed frog):	ctdsp2.S	Alliance	DIOPT (Xenbase)
Xenopus laevis (African clawed frog):	ctdsp2.L	Alliance	DIOPT (Xenbase)

Related Pseudogenes:

LOC100128056 LOC100422645

Allele / Splice:

See ClinVar data

Latest Assembly:

GRCh38 - Human Genome Assembly GRCh38

Position:

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	12	57,819,927 - 57,846,729 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	12	57,819,927 - 57,846,729 (-)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	12	58,213,710 - 58,240,512 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	12	56,499,977 - 56,527,014 (-)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	12	56,499,978 - 56,526,789	NCBI
Celera	12	57,871,630 - 57,898,666 (-)	NCBI		Celera
Cytogenetic Map	12	q14.1	NCBI
HuRef	12	55,250,675 - 55,277,708 (-)	NCBI		HuRef
CHM1_1	12	58,181,469 - 58,208,506 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	12	57,788,296 - 57,815,097 (-)	NCBI		T2T-CHM13v2.0

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

(+)-schisandrin B (ISO)

1,2-dichloroethane (ISO)

1,2-dimethylhydrazine (ISO)

17beta-estradiol (EXP)

2,3,7,8-tetrachlorodibenzodioxine (ISO)

2-bromohexadecanoic acid (EXP)

2-methylcholine (EXP)

3,3',5,5'-tetrabromobisphenol A (ISO)

4,4'-sulfonyldiphenol (ISO)

acrolein (EXP)

aflatoxin B1 (EXP,ISO)

Aflatoxin B2 alpha (EXP)

arsane (EXP)

arsenic atom (EXP)

benzo[a]pyrene (EXP,ISO)

benzo[a]pyrene diol epoxide I (EXP)

benzo[e]pyrene (EXP)

bisphenol A (ISO)

cadmium atom (EXP)

cadmium dichloride (EXP)

carbon nanotube (ISO)

CGP 52608 (EXP)

chlorpyrifos (ISO)

chromium(6+) (ISO)

clofibrate (ISO)

cyclosporin A (EXP)

dorsomorphin (EXP)

doxorubicin (EXP)

ethanol (ISO)

flusilazole (ISO)

FR900359 (EXP)

hexaconazole (ISO)

lipopolysaccharide (ISO)

metformin (ISO)

methapyrilene (EXP)

methyl methanesulfonate (EXP)

Methylazoxymethanol acetate (ISO)

Mono-carboxy isooctyl phthalate (EXP)

N,N,N',N'-tetrakis(2-pyridylmethyl)ethylenediamine (EXP)

nickel atom (EXP)

ozone (EXP)

paracetamol (EXP,ISO)

phenylmercury acetate (EXP)

propiconazole (ISO)

SB 431542 (EXP)

silicon dioxide (EXP)

sodium arsenite (ISO)

sunitinib (EXP)

temozolomide (EXP)

tetrachloroethene (ISO)

tetrachloromethane (ISO)

triadimefon (ISO)

triphenyl phosphate (EXP)

troglitazone (ISO)

urethane (EXP)

valproic acid (EXP,ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

chromatin remodeling (IEA)

negative regulation of G1/S transition of mitotic cell cycle (IEA,ISO)

negative regulation of protein phosphorylation (ISO)

protein dephosphorylation (IDA)

regulation of transcription by RNA polymerase II (IEA)

Cellular Component

nucleoplasm (TAS)

nucleus (IEA)

Molecular Function

calmodulin-dependent protein phosphatase activity (IEA)

histone H2AXS140 phosphatase activity (IEA)

MAP kinase serine/threonine phosphatase activity (IEA)

metal ion binding (IEA)

myosin phosphatase activity (IEA)

phosphatase activity (IEA)

phosphoprotein phosphatase activity (IEA)

protein binding (IPI)

protein serine/threonine phosphatase activity (IEA)

RNA polymerase II CTD heptapeptide repeat phosphatase activity (IBA,IDA,IEA)

RNA polymerase II CTD heptapeptide repeat S2 phosphatase activity (IEA)

RNA polymerase II CTD heptapeptide repeat S5 phosphatase activity (IEA)

RNA polymerase II CTD heptapeptide repeat S7 phosphatase activity (IEA)

RNA polymerase II CTD heptapeptide repeat T4 phosphatase activity (IEA)

RNA polymerase II CTD heptapeptide repeat Y1 phosphatase activity (IEA)

Molecular Pathway Annotations Click to see Annotation Detail View

Bone morphogenetic proteins signaling pathway (EXP)

References

References - curated

#	Reference Title	Reference Citation
1.	GOAs Human GO annotations	GOA_HUMAN data from the GO Consortium
2.	PID Annotation Import Pipeline	Pipeline to import Pathway Interaction Database annotations from NCI into RGD
3.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions

Additional References at PubMed

PMID:8090779	PMID:8673473	PMID:9315096	PMID:12477932	PMID:12721286	PMID:15146197	PMID:15489334	PMID:16344560	PMID:16724108	PMID:16751776	PMID:16882717	PMID:17085434
PMID:17207965	PMID:19004823	PMID:21516116	PMID:21873635	PMID:22458338	PMID:25416956	PMID:25990325	PMID:26186194	PMID:27229929	PMID:27880917	PMID:28065597	PMID:28514442
PMID:28986522	PMID:31774910	PMID:32296183	PMID:32513696	PMID:32973332	PMID:33961781	PMID:34432599	PMID:35748872	PMID:35844135	PMID:37478010

Genomics

Comparative Map Data

CTDSP2
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	12	57,819,927 - 57,846,729 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	12	57,819,927 - 57,846,729 (-)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	12	58,213,710 - 58,240,512 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	12	56,499,977 - 56,527,014 (-)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	12	56,499,978 - 56,526,789	NCBI
Celera	12	57,871,630 - 57,898,666 (-)	NCBI		Celera
Cytogenetic Map	12	q14.1	NCBI
HuRef	12	55,250,675 - 55,277,708 (-)	NCBI		HuRef
CHM1_1	12	58,181,469 - 58,208,506 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	12	57,788,296 - 57,815,097 (-)	NCBI		T2T-CHM13v2.0

Ctdsp2
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	10	126,814,586 - 126,835,844 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	10	126,814,586 - 126,835,844 (+)	Ensembl		GRCm39 Ensembl
GRCm38	10	126,978,717 - 126,999,975 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	10	126,978,717 - 126,999,975 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	10	126,415,773 - 126,437,031 (+)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	10	126,398,561 - 126,402,918 (+)	NCBI		MGSCv36	mm8
Celera	10	129,370,578 - 129,391,937 (+)	NCBI		Celera
Cytogenetic Map	10	D3	NCBI
cM Map	10	74.35	NCBI

Ctdsp2
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	7	64,690,737 - 64,710,639 (+)	NCBI		GRCr8
mRatBN7.2	7	62,805,398 - 62,825,306 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	7	62,805,658 - 62,825,302 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	7	64,694,709 - 64,714,611 (+)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	7	66,897,110 - 66,917,012 (+)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	7	66,698,365 - 66,718,268 (+)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	7	70,283,683 - 70,291,795 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	7	70,283,710 - 70,288,568 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	7	70,460,026 - 70,468,044 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
Celera	7	59,964,189 - 59,969,458 (+)	NCBI		Celera
Cytogenetic Map	7	q22	NCBI

Ctdsp2
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955458	5,523,548 - 5,549,398 (-)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955458	5,523,548 - 5,549,190 (-)	NCBI	ChiLan1.0	ChiLan1.0

CTDSP2
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	10	36,493,787 - 36,520,919 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	12	36,490,567 - 36,517,684 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	12	31,079,686 - 31,106,789 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	12	31,340,308 - 31,367,164 (+)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	12	31,340,313 - 31,367,164 (+)	Ensembl	panpan1.1		panPan2

CTDSP2
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	10	1,875,307 - 1,898,385 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	10	1,876,536 - 1,898,348 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	10	1,938,082 - 1,960,869 (-)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	10	1,884,550 - 1,907,344 (-)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	10	1,884,618 - 1,907,270 (-)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	10	1,862,042 - 1,885,087 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	10	2,104,263 - 2,127,308 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	10	2,228,959 - 2,252,119 (-)	NCBI		UU_Cfam_GSD_1.0

Ctdsp2
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024404945	56,892,954 - 56,918,112 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936646	1,952,123 - 1,977,337 (-)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936646	1,952,123 - 1,977,279 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

CTDSP2
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	5	23,105,172 - 23,132,586 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	5	23,111,366 - 23,132,811 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1

CTDSP2
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	11	53,733,041 - 53,759,809 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	11	53,736,699 - 53,742,750 (-)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666037	192,201,834 - 192,228,574 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Ctdsp2
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624802	10,108,098 - 10,130,617 (+)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624802	10,107,715 - 10,133,710 (+)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants

Variants in CTDSP2
12 total Variants

Clinical Variants

Name	Type	Condition(s)	Position(s)	Clinical significance
GRCh38/hg38 12q13.3-14.2(chr12:57013355-63042498)x1	copy number loss	See cases [RCV000052813]	Chr12:57013355..63042498 [GRCh38] Chr12:57407139..63436278 [GRCh37] Chr12:55693406..61722545 [NCBI36] Chr12:12q13.3-14.2	pathogenic
GRCh38/hg38 12q13.3-14.1(chr12:57041158-60273934)x1	copy number loss	See cases [RCV000052814]	Chr12:57041158..60273934 [GRCh38] Chr12:57434942..60667715 [GRCh37] Chr12:55721209..58953982 [NCBI36] Chr12:12q13.3-14.1	pathogenic
GRCh38/hg38 12p13.33-q24.33(chr12:121271-133196807)x3	copy number gain	See cases [RCV000139555]	Chr12:121271..133196807 [GRCh38] Chr12:282465..133773393 [GRCh37] Chr12:100698..132283466 [NCBI36] Chr12:12p13.33-q24.33	pathogenic
GRCh37/hg19 12p13.33-q24.33(chr12:1-133851895)x3	copy number gain	See cases [RCV000258805]	Chr12:1..133851895 [GRCh37] Chr12:12p13.33-q24.33	pathogenic\|likely pathogenic
GRCh37/hg19 12p13.33-q24.33(chr12:173787-133777902)x3	copy number gain	See cases [RCV000510482]	Chr12:173787..133777902 [GRCh37] Chr12:12p13.33-q24.33	pathogenic
GRCh37/hg19 12p13.33-q24.33(chr12:173787-133777902)	copy number gain	See cases [RCV000511643]	Chr12:173787..133777902 [GRCh37] Chr12:12p13.33-q24.33	pathogenic
GRCh37/hg19 12p13.33-q24.33(chr12:621220-133779118)x3	copy number gain	not provided [RCV000750253]	Chr12:621220..133779118 [GRCh37] Chr12:12p13.33-q24.33	pathogenic
GRCh37/hg19 12p13.33-q24.33(chr12:191619-133777645)x3	copy number gain	not provided [RCV000750246]	Chr12:191619..133777645 [GRCh37] Chr12:12p13.33-q24.33	pathogenic
NM_005730.4(CTDSP2):c.465A>T (p.Glu155Asp)	single nucleotide variant	not specified [RCV004320923]	Chr12:57824266 [GRCh38] Chr12:58218049 [GRCh37] Chr12:12q14.1	uncertain significance
NM_005730.4(CTDSP2):c.402C>T (p.Thr134=)	single nucleotide variant	not provided [RCV000933460]	Chr12:57826355 [GRCh38] Chr12:58220138 [GRCh37] Chr12:12q14.1	likely benign
GRCh37/hg19 12q13.2-14.1(chr12:55552371-62126304)x3	copy number gain	not provided [RCV001006505]	Chr12:55552371..62126304 [GRCh37] Chr12:12q13.2-14.1	pathogenic
GRCh37/hg19 12q13.3-14.1(chr12:57582163-59031979)x1	copy number loss	not provided [RCV001006506]	Chr12:57582163..59031979 [GRCh37] Chr12:12q13.3-14.1	likely pathogenic
GRCh37/hg19 12q13.3-14.1(chr12:57631073-58236597)x1	copy number loss	not provided [RCV002474565]	Chr12:57631073..58236597 [GRCh37] Chr12:12q13.3-14.1	likely pathogenic
GRCh37/hg19 12q13.3-14.1(chr12:57064059-59314016)x1	copy number loss	not provided [RCV003222783]	Chr12:57064059..59314016 [GRCh37] Chr12:12q13.3-14.1	likely pathogenic
NM_005730.4(CTDSP2):c.77A>G (p.Lys26Arg)	single nucleotide variant	not specified [RCV004361502]	Chr12:57829584 [GRCh38] Chr12:58223367 [GRCh37] Chr12:12q14.1	uncertain significance
NM_005730.4(CTDSP2):c.718A>C (p.Met240Leu)	single nucleotide variant	not specified [RCV004374891]	Chr12:57823700 [GRCh38] Chr12:58217483 [GRCh37] Chr12:12q14.1	uncertain significance
NM_005730.4(CTDSP2):c.248A>G (p.Tyr83Cys)	single nucleotide variant	not specified [RCV004374890]	Chr12:57827556 [GRCh38] Chr12:58221339 [GRCh37] Chr12:12q14.1	uncertain significance
NM_005730.4(CTDSP2):c.768C>T (p.Ser256=)	single nucleotide variant	CTDSP2-related disorder [RCV003909412]	Chr12:57823650 [GRCh38] Chr12:58217433 [GRCh37] Chr12:12q14.1	likely benign
NM_005730.4(CTDSP2):c.747C>A (p.Ile249=)	single nucleotide variant	CTDSP2-related disorder [RCV003957200]	Chr12:57823671 [GRCh38] Chr12:58217454 [GRCh37] Chr12:12q14.1	likely benign
NM_005730.4(CTDSP2):c.786C>T (p.Tyr262=)	single nucleotide variant	CTDSP2-related disorder [RCV003911569]	Chr12:57823632 [GRCh38] Chr12:58217415 [GRCh37] Chr12:12q14.1	likely benign
NM_005730.4(CTDSP2):c.621G>T (p.Gly207=)	single nucleotide variant	EBV-positive nodal T- and NK-cell lymphoma [RCV004560215]	Chr12:57823973 [GRCh38] Chr12:58217756 [GRCh37] Chr12:12q14.1	likely benign
NM_005730.4(CTDSP2):c.197C>A (p.Ala66Glu)	single nucleotide variant	not specified [RCV004615837]	Chr12:57829464 [GRCh38] Chr12:58223247 [GRCh37] Chr12:12q14.1	uncertain significance
NM_005730.4(CTDSP2):c.781G>A (p.Val261Ile)	single nucleotide variant	not specified [RCV004615836]	Chr12:57823637 [GRCh38] Chr12:58217420 [GRCh37] Chr12:12q14.1	uncertain significance
NM_005730.4(CTDSP2):c.23C>T (p.Thr8Ile)	single nucleotide variant	not specified [RCV004615838]	Chr12:57846413 [GRCh38] Chr12:58240196 [GRCh37] Chr12:12q14.1	uncertain significance

miRNA Target Status

Predicted Target Of

	Summary Value
Count of predictions:	4015
Count of miRNA genes:	1175
Interacting mature miRNAs:	1482
Transcripts:	ENST00000398073, ENST00000547169, ENST00000547701, ENST00000548823, ENST00000549039, ENST00000550144, ENST00000551594, ENST00000552294
Prediction methods:	Microtar, Miranda, Rnahybrid, Targetscan
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (GRCh38)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
407246788	GWAS895764_H	adolescent idiopathic scoliosis QTL GWAS895764 (human)		3e-33	adolescent idiopathic scoliosis		12	57840479	57840480	Human
407327177	GWAS976153_H	insomnia QTL GWAS976153 (human)		8e-14	insomnia		12	57830154	57830155	Human

Markers in Region

RH45075

Human Assembly	Chr	Position (strand)	Source	JBrowse
GRCh37	12	58,216,653 - 58,216,874	UniSTS	GRCh37
Build 36	12	56,502,920 - 56,503,141	RGD	NCBI36
Celera	12	57,874,573 - 57,874,794	RGD
Cytogenetic Map	12	q14.1	UniSTS
HuRef	12	55,253,618 - 55,253,839	UniSTS
GeneMap99-GB4 RH Map	12	277.56	UniSTS
NCBI RH Map	12	459.1	UniSTS

RH67816

Human Assembly	Chr	Position (strand)	Source	JBrowse
Cytogenetic Map	12	q14.1	UniSTS

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Download All Expressed Objects for this Gene

adipose tissue	alimentary part of gastrointestinal system	appendage	circulatory system	ectoderm	endocrine system	endoderm	entire extraembryonic component	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	mesenchyme	mesoderm	musculoskeletal system	nervous system	pharyngeal arch	renal system	reproductive system	respiratory system	sensory system	visual system
1204	2439	2788	2253	4974	1726	2351	6	624	1951	465	2270	7306	6472	53	3734	1	852	1744	1617	175	1

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_005730	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_005268556	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_054370721	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AC025165	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AC083805	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AC121759	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AF000152	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AF022231	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK226076	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK291289	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK294930	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK310183	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK310873	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK311070	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK312413	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AY279531	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BC018922	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BC065920	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CH471054	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CN313995	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CP068266	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	DB001093	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	U81556	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENST00000398073 ⟹ ENSP00000381148

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38.p14 Ensembl	12	57,819,927 - 57,846,729 (-)	Ensembl

Ensembl Acc Id:

ENST00000547169

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38.p14 Ensembl	12	57,822,891 - 57,824,543 (-)	Ensembl

Ensembl Acc Id:

ENST00000547701 ⟹ ENSP00000446705

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38.p14 Ensembl	12	57,823,461 - 57,845,534 (-)	Ensembl

Ensembl Acc Id:

ENST00000548823 ⟹ ENSP00000447046

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38.p14 Ensembl	12	57,822,800 - 57,846,704 (-)	Ensembl

Ensembl Acc Id:

ENST00000549039 ⟹ ENSP00000448386

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38.p14 Ensembl	12	57,823,183 - 57,826,402 (-)	Ensembl

Ensembl Acc Id:

ENST00000550144 ⟹ ENSP00000448299

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38.p14 Ensembl	12	57,823,958 - 57,829,550 (-)	Ensembl

Ensembl Acc Id:

ENST00000551594 ⟹ ENSP00000448951

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38.p14 Ensembl	12	57,823,653 - 57,846,544 (-)	Ensembl

Ensembl Acc Id:

ENST00000552294

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38.p14 Ensembl	12	57,826,379 - 57,827,407 (-)	Ensembl

RefSeq Acc Id:

NM_005730 ⟹ NP_005721

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38	12	57,819,927 - 57,846,729 (-)	NCBI
GRCh37	12	58,213,710 - 58,240,747 (-)	RGD
Build 36	12	56,499,977 - 56,527,014 (-)	NCBI Archive
Celera	12	57,871,630 - 57,898,666 (-)	RGD
HuRef	12	55,250,675 - 55,277,708 (-)	ENTREZGENE
CHM1_1	12	58,181,469 - 58,208,506 (-)	NCBI
T2T-CHM13v2.0	12	57,788,296 - 57,815,097 (-)	NCBI

Sequence:

show sequence

CTCTTGTTTTCGCTCCGGATTCTCCATGTTGGACCCAAACTGAGGAGCCCGGAGCTGCCGCTGG
GGGATCGGGGCCGGGGGCACCCGGGGGAGCCGCTGCCCGGGCCGCCCGCCCTTTGTACAGGCCG
CCTCCCTTCCCGGTCCGGGGAGGAAACGAGAGGGGGGATGTGAACAGCTGTGGAAGTCGGAGTC
TCGGGAGCCGGAGCGGGCCCCCGCCCAGGCCCCCCAGCCCAGCCCAGCCCGCGCGCCCGCCCGT
CCTCCCGCCCAGCCAGCCCGGGCCCGCGGGATTGTTAGATGGAACACGGCTCCATCATCACCCA
GGCGCGGAGGGAAGACGCCCTGGTGCTCACCAAGCAAGGCCTGGTCTCCAAGTCCTCTCCTAAG
AAGCCTCGTGGACGTAACATCTTCAAGGCCCTTTTCTGCTGTTTTCGCGCCCAGCATGTTGGCC
AGTCAAGTTCCTCCACTGAGCTCGCTGCGTATAAGGAGGAAGCAAACACCATTGCTAAGTCGGA
TCTGCTCCAGTGTCTCCAGTACCAGTTCTACCAGATCCCAGGGACCTGCCTGCTCCCAGAGGTG
ACAGAGGAAGATCAAGGAAGGATCTGTGTGGTCATTGACCTCGATGAAACCCTTGTGCATAGCT
CCTTTAAGCCAATCAACAATGCTGACTTCATAGTGCCTATAGAGATTGAGGGGACCACTCACCA
GGTGTATGTGCTCAAGAGGCCTTATGTGGATGAGTTCCTGAGACGCATGGGGGAACTCTTTGAA
TGTGTTCTCTTCACTGCCAGCCTGGCCAAGTATGCCGACCCTGTGACAGACCTGCTGGACCGGT
GTGGGGTGTTCCGGGCCCGCCTATTCCGTGAGTCTTGCGTGTTCCACCAGGGCTGCTACGTCAA
GGACCTCAGCCGCCTGGGGAGGGACCTGAGAAAGACCCTCATCCTGGACAACTCGCCTGCTTCT
TACATATTCCACCCCGAGAATGCAGTGCCTGTGCAGTCCTGGTTTGATGACATGGCAGACACTG
AGTTGCTGAACCTGATCCCAATCTTTGAGGAGCTGAGCGGAGCAGAGGACGTCTACACCAGCCT
TGGGCAGCTGCGGGCCCCTTAGCCTGCCCTGCTTCCAAGCGACGGCCATCCCAGTAGGGGACTT
TCCCACACTGTGCCTTTACGATCAGCGTGACAGAGTAGAAGCTGGAGTGCCTCACCACACGGCC
CGGAAACAGCGGGAAGTAACTGGAAAGAGCTTTAGGACAGCTTAGATGCCGAGTGGGCGAATGC
CAGACCAATGATACCCAGAGCTACCTGCCGCCAACTTGTTGAGATGTGTGTTTGACTGTGAGAG
AGTGTGTGTTTGTGTGTGTGTTTTGCCATGAACTGTGGCCCCAGTGTATAGTGTTTCAGTGGGG
GAGAAGCTGAAAGACCAAGACTCTTCCCAAGTTAGCTTGTCTCCTCTCCTGTCACCCTAAGAGC
CACTGAGTTGTGTAGGGATGAAGACTATTGAAGACTCCATTGCCAAACCATGGCCTTTCCTCAG
TGTTGTAAGGCCTATGCCAAGGATAAAGGAAGGGTATGCCTTTGGGTACTCCAGGCACACACCT
TTCTGAAATCCTTCTCCAGCCAGCTGCTGCAGACAAAAGATCACATTTCTGGGAAGATGAGAAC
TTGTTTCCAGACCAGCATCCAGTGGCCATCAGGTCTTGTGGCCCAAAGGCTATGCTTGCCTCCG
GCTGAGTGCCTGGGATAGGCCTTTTCTATGTCTCCCCAAGGCTGGGGTGCTGAGCCTGCCTTCC
TCACCACCTAGCCATAGTCTCAAACCTGTGGGGAAGGAGGTTTTCTCCCTGCCCGGGAAGAGGA
CAGATAACTGATTTCCGTTCTTTTGACTGTGTTTTAAAATTCTCTTTCTAAACACAGAGTGTTG
GGCCTGGTTTGTTTCTGACAAAGTTACAGTCCTGGGCCTGTAATGAATGTCGGCGGCGCTGGGG
TTGCAGGGAAAAGACAAATCCTCAAAGCGTGGACGTGTGTCCCCATGGCTTGTGGATCAGCTAA
GCTCGGGATCATTTCCATAAGTCTGCTTTTCAGGGATTCTCTGCTGGTGCTGGTGCAAGGACTT
CTGTTCCAAAGGCTGGGAAAAACTAAGCTGTCCCAGCCCCTCCCATTTCTTGGGCAGGGCTCTT
TTCCTGTTGTGTCTTCCCCCAGGGCCTGTCCTGTACCGAGCTCTGTCTGTTCCAGCCTTCATCC
TTCCTGGCTGTTGCTTTTCCTCTTAAGGGCCTCAGAACTCTTGCTCTTCCTGGGCTGAGGGGGA
ATGAGTGTTCTTGCCATTTGCCAGCCTAATGCGCATGCTTTCTGCCTCTGGTAACAGGAGTGAG
TGAGCCCCTCAGACCTGCACTCTGGGTGTCTCCTGCTTTCAAAGGTTCTTAATAGTGAATGCTT
TAAAATTAAAGTCATCACGAAATGGAAGTTTTCCCAGGGTGGAAAATAAGAGGAAGTGCTGCTG
TAATTGGGAGCACAAGGGGCCTCCCAAAAAGGAGCCCCACCTCAGCATCACTGCCTTAATCGTG
GCCTCCCTGGGGTGGGTGGGGTTCTCTCCTCCCTCCCTCCCTCCTCCTGGGGTGGGAGGGCGCT
CCTGTTCCCATCTCTGTGTTCCCTGGAGGCAGGTATCACAAAGCATTTGTGAATTGCTTTAGGT
GCAGGGACACCACCCACTCAGGACTCTTCCCCATCATCCCTTCCATTGCCACACCCTAGATCCA
GCCTCAGGAACTAACAAGTTTTGAGAAAAGCAGGTAGTAGAGCAGCAGCTTCGTGCTCTCAGCG
GTGGCTGGCTGGCATTTTTCTCTAGCGTTGTGGTGCCACCTTCCCTTCTTGTCCCAAGGTTATA
AGGCCTTGTCTTTCTCTTTGGAATCATAAAGTGGAACAGAGTCCCCAGAACTCATGTGGCCATT
TCCGCCAGCATCACTCCCCGGTGCCTATGGGGTCCCGGTGTACCTAAAGGGAGAAGGACCCCAT
GTGCTAGCCAGAAATATACTGTCTCTTGAAGGAAAGCAGGAGCTCAGACTCTTAGAGCCAGCTG
TGGCTTCGGACCCAAGGCCTGACCTAGGCTGCTATCCTAATATTGCAGGAGGGGCCTCTCTTCC
AAGCCCCACCCTAAGGGTTAGCCCTTGGCCAAATCTTTTGCCGTCTAGGCCCAGCCAGGCTTTT
CTGACTAAATAAGCAATAAGAGGCTCTAAGCTGACTGAGTTGCAAGGACCCTTTCCGCCCTCCC
TTGGATCTCCATGTTTTTCCAGATGGCGGAAGAGCATGTGCCACCCCCTTTCCTAACAGACTTG
TCCAAGTGCTTGGCGTGGGACCCATGACCAAAGCCCAGGATGGCTTGGTGGGAGTGTCCCTGCT
GCATCTGCATGAAGCCCCTGCTTTTTAGGCCTCACTCCCATCAGAACCCTGCCTGCCCACCTGC
AACTCCCCCCCAACAATGCCATTCCCACTTGCCCCAGAGAAGCTACTCGGCCAAACCTAGCCAG
GGTCTGTTCTTGTGGACCAGAGCCAGCCTAGTCATTATTTGCTGTCGGGTTTCCAGTTTCACCG
TGTGTTAGGGTGAGGGATGATTGTAAAATTTGCTCCTCAAAGGAATCAGGCCAGACTCAATTTT
GGAGGGCAAGACAGGGAGGAGGCCGCTTCATCCCAGACTCTCTTCTAGGGCTTCCCACCATCAG
CCCCTCCCACTTGAGACTGGTCTTTGGGAGGCAATAGGCCACCATGCCTGGTCAGCACCAATTC
AAGCCATGCCAGGAATCTGCCTACCTGCCAGGTTCAGTTCTTTTAAGGTGCCTCTTCAGGGACA
CAGTGTGTCTCTCTGATTGGGCTTCTAAATCAAAAGCCTGATGTTCGTGTCCCTCTCATAGGGG
GAGCTTTGGACACAGGACCAGTTTGGAAAAGGGTCAGGTAAGGGTTTCCACTCTGCACATTGTA
GAGGGAACACTCTGTAGGCCCATGGGTCCCTTACTAGAGAGGTTGAGTGAATTTGCCTTCAGTT
AACATGGGACCTTCTGTTTAGCTTCCTCTTGCTTCCCAAAGATTTTAAGCATTTTGTAAATGTA
TAAACTCACCTCTGGTAACAGTGGCCCAGACGCTGCTTTGTGCTAAAAGCATGGGAAATGTAAA
GGCAGTCTTTCTCTGGGAAATGGATGCTATTCTATTCTGCTGCCCCTACCTGTTCCTGAGGCCT
CATTTAGAAAGAAAATCCCCTCAGAAGGCTGTCTGGCACCCAGTGTCCTAGCCAGGCCAAGTAT
ATGAGAAAGGTAAGTCCATTTTCCCCTTCAGGTCCTCAGTGGATTACTTAACCACTGCTGTCCC
TCGGTCCCTTTTTCCTAAACGGGTTTAGTTCTGTCTTTTTTCTCCTTTTTTCTAAATGCTGGTA
AATATTTACATTCAGCCAGGGAAGAGGAGGCCAGAGGTCGGGCCAGCTGCCCCATTCTTTTAAC
GTTGTAGGGCCTGCCCATGGAGCGGACCCTCCTCTTTGGGCCTCGTGAGCTTTTTTGCTTATCA
TGTTCCATTTCGTGCCGCTTTCCCCCTTCAAGATGCCATTTGGAGGGTAGGGGATCTGCTTCCC
ACTGTGACTGGGCTATGGGATTCTGACTACCTTGCTTACAGATTCATGGTTTGATAAATTTGTT
GTATTCAAAAACTTGAAATGCAGGACGCCATTAAGTGTCTGTTTATATTTTTGGAATATTTGTA
TTACTTACAATTAATTAATAAAAGTGGGTTTAAAAAACCTTTCCAGGAA

hide sequence

RefSeq Acc Id:

XM_005268556 ⟹ XP_005268613

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38	12	57,819,927 - 57,846,729 (-)	NCBI
GRCh37	12	58,213,710 - 58,240,747 (-)	NCBI

Sequence:

show sequence

GTTTTCGCTCCGGATTCTCCATGTTGGACCCAAACTGAGGAGCCCGGAGCTGCCGCTGGGGGAT
CGGGGCCGGGGGCACCCGGGGGAGCCGCTGCCCGGGCCGCCCGCCCTTTGTACAGGCCGCCTCC
CTTCCCGGTCCGGGGAGGAAACGAGAGGGGGGATGTGAACAGCTGTGGAAGTCGGAGTCTCGGG
AGCCGGAGCGGGCCCCCGCCCAGGCCCCCCAGCCCAGCCCAGCCCGCGCGCCCGCCCGTCCTCC
CGCCCAGCCAGCCCGGGCCCGCGGGATTGTTAGATGGAACACGGCTCCATCATCACCCAGGCGC
GGAGGGAAGACGCCCTGGTGCTCACCAAGCAAGGCCTGGTCTCCAAGTCCTCTCCTAAGAAGCC
TCGTGGACGTAACATCTTCAAGGCCCTTTTCTGCTGTTTTCGCGCCCAGCATGTTGGCCAGTCA
AGTTCCTCCACTGAGCTCGCTGCGTATAAGGAGGAAGCAAACACCATTGCTAAGTCGGATCTGC
TCCAGTGTCTCCAGTACCAGTTCTACCAGGTACGTGACTCTGGCCTGATCCCAGGGACCTGCCT
GCTCCCAGAGGTGACAGAGGAAGATCAAGGAAGGATCTGTGTGGTCATTGACCTCGATGAAACC
CTTGTGCATAGCTCCTTTAAGCCAATCAACAATGCTGACTTCATAGTGCCTATAGAGATTGAGG
GGACCACTCACCAGGTGTATGTGCTCAAGAGGCCTTATGTGGATGAGTTCCTGAGACGCATGGG
GGAACTCTTTGAATGTGTTCTCTTCACTGCCAGCCTGGCCAAGTATGCCGACCCTGTGACAGAC
CTGCTGGACCGGTGTGGGGTGTTCCGGGCCCGCCTATTCCGTGAGTCTTGCGTGTTCCACCAGG
GCTGCTACGTCAAGGACCTCAGCCGCCTGGGGAGGGACCTGAGAAAGACCCTCATCCTGGACAA
CTCGCCTGCTTCTTACATATTCCACCCCGAGAATGCAGTGCCTGTGCAGTCCTGGTTTGATGAC
ATGGCAGACACTGAGTTGCTGAACCTGATCCCAATCTTTGAGGAGCTGAGCGGAGCAGAGGACG
TCTACACCAGCCTTGGGCAGCTGCGGGCCCCTTAGCCTGCCCTGCTTCCAAGCGACGGCCATCC
CAGTAGGGGACTTTCCCACACTGTGCCTTTACGATCAGCGTGACAGAGTAGAAGCTGGAGTGCC
TCACCACACGGCCCGGAAACAGCGGGAAGTAACTGGAAAGAGCTTTAGGACAGCTTAGATGCCG
AGTGGGCGAATGCCAGACCAATGATACCCAGAGCTACCTGCCGCCAACTTGTTGAGATGTGTGT
TTGACTGTGAGAGAGTGTGTGTTTGTGTGTGTGTTTTGCCATGAACTGTGGCCCCAGTGTATAG
TGTTTCAGTGGGGGAGAAGCTGAAAGACCAAGACTCTTCCCAAGTTAGCTTGTCTCCTCTCCTG
TCACCCTAAGAGCCACTGAGTTGTGTAGGGATGAAGACTATTGAAGACTCCATTGCCAAACCAT
GGCCTTTCCTCAGTGTTGTAAGGCCTATGCCAAGGATAAAGGAAGGGTATGCCTTTGGGTACTC
CAGGCACACACCTTTCTGAAATCCTTCTCCAGCCAGCTGCTGCAGACAAAAGATCACATTTCTG
GGAAGATGAGAACTTGTTTCCAGACCAGCATCCAGTGGCCATCAGGTCTTGTGGCCCAAAGGCT
ATGCTTGCCTCCGGCTGAGTGCCTGGGATAGGCCTTTTCTATGTCTCCCCAAGGCTGGGGTGCT
GAGCCTGCCTTCCTCACCACCTAGCCATAGTCTCAAACCTGTGGGGAAGGAGGTTTTCTCCCTG
CCCGGGAAGAGGACAGATAACTGATTTCCGTTCTTTTGACTGTGTTTTAAAATTCTCTTTCTAA
ACACAGAGTGTTGGGCCTGGTTTGTTTCTGACAAAGTTACAGTCCTGGGCCTGTAATGAATGTC
GGCGGCGCTGGGGTTGCAGGGAAAAGACAAATCCTCAAAGCGTGGACGTGTGTCCCCATGGCTT
GTGGATCAGCTAAGCTCGGGATCATTTCCATAAGTCTGCTTTTCAGGGATTCTCTGCTGGTGCT
GGTGCAAGGACTTCTGTTCCAAAGGCTGGGAAAAACTAAGCTGTCCCAGCCCCTCCCATTTCTT
GGGCAGGGCTCTTTTCCTGTTGTGTCTTCCCCCAGGGCCTGTCCTGTACCGAGCTCTGTCTGTT
CCAGCCTTCATCCTTCCTGGCTGTTGCTTTTCCTCTTAAGGGCCTCAGAACTCTTGCTCTTCCT
GGGCTGAGGGGGAATGAGTGTTCTTGCCATTTGCCAGCCTAATGCGCATGCTTTCTGCCTCTGG
TAACAGGAGTGAGTGAGCCCCTCAGACCTGCACTCTGGGTGTCTCCTGCTTTCAAAGGTTCTTA
ATAGTGAATGCTTTAAAATTAAAGTCATCACGAAATGGAAGTTTTCCCAGGGTGGAAAATAAGA
GGAAGTGCTGCTGTAATTGGGAGCACAAGGGGCCTCCCAAAAAGGAGCCCCACCTCAGCATCAC
TGCCTTAATCGTGGCCTCCCTGGGGTGGGTGGGGTTCTCTCCTCCCTCCCTCCCTCCTCCTGGG
GTGGGAGGGCGCTCCTGTTCCCATCTCTGTGTTCCCTGGAGGCAGGTATCACAAAGCATTTGTG
AATTGCTTTAGGTGCAGGGACACCACCCACTCAGGACTCTTCCCCATCATCCCTTCCATTGCCA
CACCCTAGATCCAGCCTCAGGAACTAACAAGTTTTGAGAAAAGCAGGTAGTAGAGCAGCAGCTT
CGTGCTCTCAGCGGTGGCTGGCTGGCATTTTTCTCTAGCGTTGTGGTGCCACCTTCCCTTCTTG
TCCCAAGGTTATAAGGCCTTGTCTTTCTCTTTGGAATCATAAAGTGGAACAGAGTCCCCAGAAC
TCATGTGGCCATTTCCGCCAGCATCACTCCCCGGTGCCTATGGGGTCCCGGTGTACCTAAAGGG
AGAAGGACCCCATGTGCTAGCCAGAAATATACTGTCTCTTGAAGGAAAGCAGGAGCTCAGACTC
TTAGAGCCAGCTGTGGCTTCGGACCCAAGGCCTGACCTAGGCTGCTATCCTAATATTGCAGGAG
GGGCCTCTCTTCCAAGCCCCACCCTAAGGGTTAGCCCTTGGCCAAATCTTTTGCCGTCTAGGCC
CAGCCAGGCTTTTCTGACTAAATAAGCAATAAGAGGCTCTAAGCTGACTGAGTTGCAAGGACCC
TTTCCGCCCTCCCTTGGATCTCCATGTTTTTCCAGATGGCGGAAGAGCATGTGCCACCCCCTTT
CCTAACAGACTTGTCCAAGTGCTTGGCGTGGGACCCATGACCAAAGCCCAGGATGGCTTGGTGG
GAGTGTCCCTGCTGCATCTGCATGAAGCCCCTGCTTTTTAGGCCTCACTCCCATCAGAACCCTG
CCTGCCCACCTGCAACTCCCCCCCAACAATGCCATTCCCACTTGCCCCAGAGAAGCTACTCGGC
CAAACCTAGCCAGGGTCTGTTCTTGTGGACCAGAGCCAGCCTAGTCATTATTTGCTGTCGGGTT
TCCAGTTTCACCGTGTGTTAGGGTGAGGGATGATTGTAAAATTTGCTCCTCAAAGGAATCAGGC
CAGACTCAATTTTGGAGGGCAAGACAGGGAGGAGGCCGCTTCATCCCAGACTCTCTTCTAGGGC
TTCCCACCATCAGCCCCTCCCACTTGAGACTGGTCTTTGGGAGGCAATAGGCCACCATGCCTGG
TCAGCACCAATTCAAGCCATGCCAGGAATCTGCCTACCTGCCAGGTTCAGTTCTTTTAAGGTGC
CTCTTCAGGGACACAGTGTGTCTCTCTGATTGGGCTTCTAAATCAAAAGCCTGATGTTCGTGTC
CCTCTCATAGGGGGAGCTTTGGACACAGGACCAGTTTGGAAAAGGGTCAGGTAAGGGTTTCCAC
TCTGCACATTGTAGAGGGAACACTCTGTAGGCCCATGGGTCCCTTACTAGAGAGGTTGAGTGAA
TTTGCCTTCAGTTAACATGGGACCTTCTGTTTAGCTTCCTCTTGCTTCCCAAAGATTTTAAGCA
TTTTGTAAATGTATAAACTCACCTCTGGTAACAGTGGCCCAGACGCTGCTTTGTGCTAAAAGCA
TGGGAAATGTAAAGGCAGTCTTTCTCTGGGAAATGGATGCTATTCTATTCTGCTGCCCCTACCT
GTTCCTGAGGCCTCATTTAGAAAGAAAATCCCCTCAGAAGGCTGTCTGGCACCCAGTGTCCTAG
CCAGGCCAAGTATATGAGAAAGGTAAGTCCATTTTCCCCTTCAGGTCCTCAGTGGATTACTTAA
CCACTGCTGTCCCTCGGTCCCTTTTTCCTAAACGGGTTTAGTTCTGTCTTTTTTCTCCTTTTTT
CTAAATGCTGGTAAATATTTACATTCAGCCAGGGAAGAGGAGGCCAGAGGTCGGGCCAGCTGCC
CCATTCTTTTAACGTTGTAGGGCCTGCCCATGGAGCGGACCCTCCTCTTTGGGCCTCGTGAGCT
TTTTTGCTTATCATGTTCCATTTCGTGCCGCTTTCCCCCTTCAAGATGCCATTTGGAGGGTAGG
GGATCTGCTTCCCACTGTGACTGGGCTATGGGATTCTGACTACCTTGCTTACAGATTCATGGTT
TGATAAATTTGTTGTATTCAAAAACTTGAAATGCAGGACGCCATTAAGTGTCTGTTTATATTTT
TGGAATATTTGTATTACTTACAATTAATTAATAAAAGTGGGTTTAAAAAACCTTTCCAGGAATG
TGAGCTGCCACCAACCTTCATTGGCCCTTAAGTGTTCACTGGGCCCATGGCAAGCACCGCCTTT
CTTCTCGCAACCCCTTCCATCATGAAGCAGCTGCACCCCCGGGCTGAGTGGGGTGTTGCACCCA
CCGGGAGGCCAGCTGCAGATGCCACACAGGGCTTCCGCTCAAGGTTACACAAGTTCTGCTGTGA
TCAACCCCATTGCAGTCAGGTGCTTAGCACGTGTATATGCTTGATGTCCTATTGACTTCTGGGC
ATGAACCAGAAGCCCTAAGGGAATGGATTATTATTTTTTTTTTTTTTTTTGAAATGGAGTCTTG
CTCTGTTGCCCAGGCTAGAGGCAGTGGCATGATCTCAGCTCACTGCAACCTCCACCTCCCAGGT
TCAAGCGATTCTCCTGCCTCAGTCTCCTGAGTAGCTGGGATTACAGGCGCCTGCCAGCACGCCC
GGCTCATTTTTGTATTTTTAGTAGAGATGGGGTTTCACCATCTTGGCCAGGCTGTTTTCAAACT
CCTCACATTGTGATCCACCCACCTCAGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCA
CCACACCCAGCCCTGGGAATGGAGTCTTGATTCTTCTCTGCCCCTCACTGATTCTTCCAAACTG
GAAACCCTGAAGCTGAGAGCCCAGCATGGTTCCTGGCAAACAGCAGGCACTCAAATATTGATTG
GTTTACTGTATGACTAGTAGAGACCCCAACGAGCAAAACTGTGGCCTAATAAAATTCTGGCTCC
TCTCCCAGACTTCCCCTCCCTTTGAGAAATGCCAGAAGCTTCTTAGGGAGGCTCTTGCCAACCT
AGACATCACAGGCACTCATGGGGCAGCTCCAGCCTCTTCCTCCTGTCATCACCATAATGCATCC
ATATCTACAATATGGCAAATTTCATATCCTTCCAACCTCTTTCCTGCATTATTGATGGGCTGTG
TGCACTTTTTAAAAAATCAATTAGATCAGGGCGTGGAGCTGGAGTTCAAAGAAGCCTTTAAAAG
TCTGCTCTTCTGTTTTGCTGTTTTGAATAGGCACAGATAAAGCTTTCCCTCTGGTTTGAATAAG
CCAAGCTCAGTGCTAGGTTGGCTCTGATTGGCCAGGACTAGGAAAATGCGGTTAAGATGCAAAC
ACAAGCAAATATAACCCAGTATCTCTGCGGCCATTACTAAGCTAAGGCAGCAGGACCTGGAGCC
TCCTGCTTTGGAGTGGTTCTTCAATACTGCTGCTGCTTACGCGCCGGGAAACTGGGAAGGCTGG
TGAGCGAGAAGGCAAGGTAAGGTCTCTGATTTACGGGGGCATGCCAGTTAATCCTCCTGAATGA
GGAAGAAATGAAAGGAAGAGGAGCTTGAGAGTCCCTTGGCTTTGTCTTCTGAGATGAGGCTTTT
AAAATGAACCAGGAGTCTGGCTGGCCAGTTTTGCAAACTTCTTGTTCAGAAGAACCCCTTAGAG
GCAGCTGAACATATAGGGCACATTTTCAAAAGCTGGGAAAGACAGACCCCTTTCACCTATCCCT
AGAGAAAGATGGTATGGAGCAAGGCAGGAGGAGTTAAAACCAGCTTCCTGGCCCAGAGAGGTGG
CTTACACCTGTAATCCCAACACTTTGGGAAGCCAGGGCATGAGGATTGTTTGAGCCCAGGAGTT
TGTAACTTGTGACCATCCTGGGCAACATAGTGAGACCCTGTCTCTACAAAAAAAAAAAAAAAAA
AAAAAAAAAAAAAAGCCAAGCATGGTGGTGCACACCTGTGGTCTCAGCTTCTCAGGAGGCTGAG
GCAGAAGGATCACTTGAGCCCAGGAGGTGGCGGTTGCAGTGAGCCGTGATTGTACCACTGCACT
CCAGCCTGGGTGACAGAGCAAGACCCTGTCTCAAAAACAACAACAACAAAAAACAGCTTCCTCT
GCTCAGGGTCCGTCCAAAAGGGCATCTCTGAGAATTACAGGCCACTGGCTTTTAACCTGACATT
TCAAAACTGTGCCCCACACCCAAGGGGTTTCTGCAGTCCTCTCAAAGGATACTGAATTAGGATT
TAGGGAGAAGGAGAGACCCAGCTTTGGGAGATTTGATGTCAGAACTGTGTTTTCTGTGTGTTCC
AGTGTGACAGGAAGTCCCTTCCTGGAGCTTATCCTCTCGCATTCGGGGTGCCTGGCCCAGGGAG
CTCCTTGATTCCTAAATTCCTGCTGGGAAACGGGACAGGTTTCAGCCTCTGAGGCTCACAGTCC
TAATTGCTGCCGGCTGGTTTGGCTTTTACCAGGGTGACAGTTCTCTGTCTCCAAGGAATGAATT
CAGTGGCCCTTGTCCCCTTCCCCTAGTTGGCTCATGGCTTTTGCCTTTAATGACTGCTACGTAG
GGTCTGAAGAAAACCCAAACACCATATTTCCTGGCAATTCTGAGCAGCACAGGGTGGGGCAGCA
CAAGTTATCAAATTAAATTCTCAAACACTGGCTGCTCCGCACCATTGCCTTGCTTTAGTCCTGC
TACAGCAGTAGACAAAGCGAGTCTGCTTTGAGCTTTATGGTTTTTTGCCAAAGTCCATACTAGA
TGGCGCATGCTCTCCAAACTTGGCTTTGTCCATCAAGGTTCAAGAAAACAATGGTCAGACATGT
TCCTCTTAACAAACAGTATGTCCCCAAACAGCAAAAATGCATACAGTCCTTTCTGGGTGAATTT
TTAAATCTTACATAAATCCATCAACCCCATCCTTTTTCCTTTGCCTCTTGGGAGAAATTAATCT
AGCTTTACATTAATTATGCATGTTATCAGATTTCAAGCTCCTTGAGAGCAGGTATTTTAATTCT
ATAAAGCCTCTACGTGGCCTTGGACATGGGTAGGTGCTTAATTACCCAAGATGCTCCTTGAATA
CAGATGGTACACGACCTACACAGACTTAGATCTTTACCACTTCCCCCCTCTCCCCACCCTGACT
TGCTCAATCCTGAAGGAACTGGAGACGTCTAAGTGTCTGAGGTTCACGCTTCCACACAGAAGCT
TGGGTCTGTGTGGGAGGGAAAAAGGAAGCCATCTGTCCGCAGGCCAGACCAGGCCACACCCTGC
TAGCACCCAGAACCCTTTGTCCCAGGCCCAGCCCTGCCATTTTACTTTCCTTGCATCTGGAAAG
CACAGGGAATATAGTAGTGACAAAAGAAGGAAGGGTTGTTTGAGTTTAAGAATAGTTTACTCTA
AAAAAAAAAAAAAAAAAAAAAAA

hide sequence

RefSeq Acc Id:

XM_054370721 ⟹ XP_054226696

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
T2T-CHM13v2.0	12	57,788,296 - 57,815,097 (-)	NCBI

Protein Sequences


Protein RefSeqs	NP_005721	(Get FASTA)	NCBI Sequence Viewer
	XP_005268613	(Get FASTA)	NCBI Sequence Viewer
	XP_054226696	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	AAB39318	(Get FASTA)	NCBI Sequence Viewer
	AAB71816	(Get FASTA)	NCBI Sequence Viewer
	AAD09331	(Get FASTA)	NCBI Sequence Viewer
	AAH65920	(Get FASTA)	NCBI Sequence Viewer
	AAP34399	(Get FASTA)	NCBI Sequence Viewer
	BAF83978	(Get FASTA)	NCBI Sequence Viewer
	BAG58009	(Get FASTA)	NCBI Sequence Viewer
	EAW97081	(Get FASTA)	NCBI Sequence Viewer
	EAW97082	(Get FASTA)	NCBI Sequence Viewer
	EAW97083	(Get FASTA)	NCBI Sequence Viewer
	EAW97084	(Get FASTA)	NCBI Sequence Viewer
	EAW97085	(Get FASTA)	NCBI Sequence Viewer
	EAW97086	(Get FASTA)	NCBI Sequence Viewer
	EAW97087	(Get FASTA)	NCBI Sequence Viewer
	EAW97088	(Get FASTA)	NCBI Sequence Viewer
	EAW97089	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSP00000381148
	ENSP00000381148.2
	ENSP00000446705.1
	ENSP00000447046.1
	ENSP00000448299.1
	ENSP00000448386.1
	ENSP00000448951.1
GenBank Protein	O14595	(Get FASTA)	NCBI Sequence Viewer

RefSeq Acc Id:

NP_005721 ⟸ NM_005730

- UniProtKB:

Q6NZY3 (UniProtKB/Swiss-Prot), Q53ZR2 (UniProtKB/Swiss-Prot), A8K5H4 (UniProtKB/Swiss-Prot), Q9UEX1 (UniProtKB/Swiss-Prot), O14595 (UniProtKB/Swiss-Prot)

- Sequence:

show sequence

MEHGSIITQARREDALVLTKQGLVSKSSPKKPRGRNIFKALFCCFRAQHVGQSSSSTELAAYKE
EANTIAKSDLLQCLQYQFYQIPGTCLLPEVTEEDQGRICVVIDLDETLVHSSFKPINNADFIVP
IEIEGTTHQVYVLKRPYVDEFLRRMGELFECVLFTASLAKYADPVTDLLDRCGVFRARLFRESC
VFHQGCYVKDLSRLGRDLRKTLILDNSPASYIFHPENAVPVQSWFDDMADTELLNLIPIFEELS
GAEDVYTSLGQLRAP

hide sequence

RefSeq Acc Id:

XP_005268613 ⟸ XM_005268556

- Peptide Label:

isoform X1

- Sequence:

show sequence

MEHGSIITQARREDALVLTKQGLVSKSSPKKPRGRNIFKALFCCFRAQHVGQSSSSTELAAYKE
EANTIAKSDLLQCLQYQFYQVRDSGLIPGTCLLPEVTEEDQGRICVVIDLDETLVHSSFKPINN
ADFIVPIEIEGTTHQVYVLKRPYVDEFLRRMGELFECVLFTASLAKYADPVTDLLDRCGVFRAR
LFRESCVFHQGCYVKDLSRLGRDLRKTLILDNSPASYIFHPENAVPVQSWFDDMADTELLNLIP
IFEELSGAEDVYTSLGQLRAP

hide sequence

Ensembl Acc Id:

ENSP00000381148 ⟸ ENST00000398073

Ensembl Acc Id:

ENSP00000446705 ⟸ ENST00000547701

Ensembl Acc Id:

ENSP00000447046 ⟸ ENST00000548823

Ensembl Acc Id:

ENSP00000448386 ⟸ ENST00000549039

Ensembl Acc Id:

ENSP00000448299 ⟸ ENST00000550144

Ensembl Acc Id:

ENSP00000448951 ⟸ ENST00000551594

RefSeq Acc Id:	XP_054226696 ⟸ XM_054370721
- Peptide Label:	isoform X1

Protein Domains

FCP1 homology

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-O14595-F1-model_v2	AlphaFold	O14595	1-271	view protein structure

Promoters

RGD ID:

6789837

Promoter ID:

HG_KWN:16014

Type:

CpG-Island

SO ACC ID:

SO:0000170

Source:

MPROMDB

Tissues & Cell Lines:

CD4+TCell, HeLa_S3, K562, Lymphoblastoid, NB4

Transcripts:

UC009ZQF.1

Position:

Human Assembly	Chr	Position (strand)	Source
Build 36	12	56,525,196 - 56,526,362 (-)	MPROMDB

RGD ID:

6789972

Promoter ID:

HG_KWN:16015

Type:

CpG-Island

SO ACC ID:

SO:0000170

Source:

MPROMDB

Tissues & Cell Lines:

CD4+TCell, CD4+TCell_12Hour, CD4+TCell_2Hour, HeLa_S3, K562, Lymphoblastoid, NB4

Transcripts:

ENST00000310189, NM_005730, UC009ZQG.1

Position:

Human Assembly	Chr	Position (strand)	Source
Build 36	12	56,526,671 - 56,527,327 (-)	MPROMDB

RGD ID:

7224623

Promoter ID:

EPDNEW_H18057

Type:

initiation region

Name:

CTDSP2_1

Description:

CTD small phosphatase 2

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Alternative Promoters:

null; see alsoEPDNEW_H18058

Experiment Methods:

Single-end sequencing.

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38	12	57,846,711 - 57,846,771	EPDNEW

RGD ID:

7224625

Promoter ID:

EPDNEW_H18058

Type:

initiation region

Name:

CTDSP2_2

Description:

CTD small phosphatase 2

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Alternative Promoters:

null; see alsoEPDNEW_H18057

Experiment Methods:

Single-end sequencing.; Paired-end sequencing.

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38	12	57,846,944 - 57,847,004	EPDNEW

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	HGNC:17077	AgrOrtholog
COSMIC	CTDSP2	COSMIC
Ensembl Genes	ENSG00000175215	Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Transcript	ENST00000398073	ENTREZGENE
	ENST00000398073.7	UniProtKB/Swiss-Prot
	ENST00000547701.5	UniProtKB/TrEMBL
	ENST00000548823.1	UniProtKB/TrEMBL
	ENST00000549039.5	UniProtKB/TrEMBL
	ENST00000550144.1	UniProtKB/TrEMBL
	ENST00000551594.1	UniProtKB/TrEMBL
Gene3D-CATH	3.40.50.1000	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
GTEx	ENSG00000175215	GTEx
HGNC ID	HGNC:17077	ENTREZGENE
Human Proteome Map	CTDSP2	Human Proteome Map
InterPro	Dullard_phosphatase	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	FCP1_dom	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	HAD-like_sf	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	HAD_sf	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	RNA_Pol_CTD_Phosphatase	UniProtKB/Swiss-Prot
	TIM50	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report	hsa:10106	UniProtKB/Swiss-Prot
NCBI Gene	10106	ENTREZGENE
OMIM	608711	OMIM
PANTHER	CARBOXY-TERMINAL DOMAIN RNA POLYMERASE II POLYPEPTIDE A SMALL PHOSPHATASE 2	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	DULLARD PROTEIN PHOSPHATASE	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam	NIF	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PharmGKB	PA128394568	PharmGKB
PROSITE	FCP1	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
SMART	CPDc	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Superfamily-SCOP	SSF56784	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt	A8K5H4	ENTREZGENE
	CTDS2_HUMAN	UniProtKB/Swiss-Prot
	F8VYL0_HUMAN	UniProtKB/TrEMBL
	F8W184_HUMAN	UniProtKB/TrEMBL
	F8W1I1_HUMAN	UniProtKB/TrEMBL
	H0YI12_HUMAN	UniProtKB/TrEMBL
	H0YI29_HUMAN	UniProtKB/TrEMBL
	O14595	ENTREZGENE
	Q53ZR2	ENTREZGENE
	Q6NZY3	ENTREZGENE
	Q9UEX1	ENTREZGENE
UniProt Secondary	A8K5H4	UniProtKB/Swiss-Prot
	Q53ZR2	UniProtKB/Swiss-Prot
	Q6NZY3	UniProtKB/Swiss-Prot
	Q9UEX1	UniProtKB/Swiss-Prot

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2015-11-10	CTDSP2	CTD small phosphatase 2		CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase 2	Symbol and/or name change	5135510	APPROVED

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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Imported Annotations - PID (archival)