Submit Data |  Help |  Video Tutorials |  News |  Publications |  FTP Download |  REST API |  Citing RGD |  Contact   
Gene: Atp6v1c1 (ATPase H+ transporting V1 subunit C1) Rattus norvegicus
Analyze
Symbol: Atp6v1c1
Name: ATPase H+ transporting V1 subunit C1
Description: Predicted to have proton-exporting ATPase activity, phosphorylative mechanism and proton-transporting ATPase activity, rotational mechanism. Predicted to be involved in proton transmembrane transport. Localizes to the apical part of cell and cytoplasmic vesicle. Orthologous to human ATP6V1C1 (ATPase H+ transporting V1 subunit C1); PARTICIPATES IN oxidative phosphorylation pathway; phagocytosis pathway; rheumatoid arthritis pathway; INTERACTS WITH (RS)-amphetamine; bisphenol A; Brodifacoum.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: ATPase, H+ transporting, lysosomal V1 subunit C1; ATPase, H+ transporting, V1 subunit C, isoform 1; LOC299971; MGC109315; V-ATPase subunit C 1; V-type proton ATPase subunit C 1; vacuolar proton pump subunit C 1
Orthologs:
Homo sapiens (human) : ATP6V1C1 (ATPase H+ transporting V1 subunit C1)  HGNC  Alliance
Mus musculus (house mouse) : Atp6v1c1 (ATPase, H+ transporting, lysosomal V1 subunit C1)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Atp6v1c1 (ATPase H+ transporting V1 subunit C1)
Pan paniscus (bonobo/pygmy chimpanzee) : ATP6V1C1 (ATPase H+ transporting V1 subunit C1)
Canis lupus familiaris (dog) : ATP6V1C1 (ATPase H+ transporting V1 subunit C1)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Atp6v1c1 (ATPase H+ transporting V1 subunit C1)
Sus scrofa (pig) : ATP6V1C1 (ATPase H+ transporting V1 subunit C1)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0777,678,853 - 77,716,658 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.0778,536,306 - 78,574,105 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4774,341,301 - 74,378,806 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.1774,362,030 - 74,399,537 (+)NCBI
Celera766,891,594 - 66,929,033 (+)NCBICelera
Cytogenetic Map7q22NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
References - curated
References - uncurated
RGD Disease Portals

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 5.0)

Additional Information

External Database Links
Nomenclature History
 
More on Atp6v1c1
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1311082
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2019-04-23
Status: ACTIVE



NHLBI Logo

RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.