Chmp1a (Rattus norvegicus - Norway rat) |
Rat Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCr8 | 19 | 68,146,672 - 68,154,952 (-) | NCBI | | GRCr8 | | | mRatBN7.2 | 19 | 51,238,153 - 51,246,433 (-) | NCBI | mRatBN7.2 | mRatBN7.2 | | | mRatBN7.2 Ensembl | 19 | 51,238,160 - 51,246,436 (-) | Ensembl | | mRatBN7.2 Ensembl | | | UTH_Rnor_SHR_Utx | 19 | 58,033,361 - 58,041,363 (-) | NCBI | Rnor_SHR | UTH_Rnor_SHR_Utx | | | UTH_Rnor_SHRSP_BbbUtx_1.0 | 19 | 58,713,074 - 58,721,354 (-) | NCBI | Rnor_SHRSP | UTH_Rnor_SHRSP_BbbUtx_1.0 | | | UTH_Rnor_WKY_Bbb_1.0 | 19 | 60,931,961 - 60,939,963 (-) | NCBI | Rnor_WKY | UTH_Rnor_WKY_Bbb_1.0 | | | Rnor_6.0 | 19 | 56,001,724 - 56,010,004 (-) | NCBI | Rnor6.0 | Rnor_6.0 | rn6 | Rnor6.0 | Rnor_6.0 Ensembl | 19 | 56,001,724 - 56,010,004 (-) | Ensembl | Rnor6.0 | | rn6 | Rnor6.0 | Rnor_5.0 | 19 | 66,707,177 - 66,715,457 (-) | NCBI | Rnor5.0 | Rnor_5.0 | rn5 | Rnor5.0 | RGSC_v3.4 | 19 | 53,521,981 - 53,530,261 (-) | NCBI | RGSC3.4 | RGSC_v3.4 | rn4 | RGSC3.4 | RGSC_v3.1 | 19 | 53,529,029 - 53,531,632 (-) | NCBI | | | | | Celera | 19 | 50,473,734 - 50,481,997 (-) | NCBI | | Celera | | | Cytogenetic Map | 19 | q12 | NCBI | | | | |
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CHMP1A (Homo sapiens - human) |
Human Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCh38 | 16 | 89,644,435 - 89,657,708 (-) | NCBI | GRCh38 | GRCh38 | hg38 | GRCh38 | GRCh38.p14 Ensembl | 16 | 89,640,816 - 89,657,738 (-) | Ensembl | GRCh38 | | hg38 | GRCh38 | GRCh37 | 16 | 89,710,843 - 89,724,116 (-) | NCBI | GRCh37 | GRCh37 | hg19 | GRCh37 | Build 36 | 16 | 88,238,344 - 88,251,630 (-) | NCBI | NCBI36 | Build 36 | hg18 | NCBI36 | Build 34 | 16 | 88,238,345 - 88,251,754 | NCBI | | | | | Celera | 16 | 74,775,335 - 74,788,601 (-) | NCBI | | Celera | | | Cytogenetic Map | 16 | q24.3 | NCBI | | | | | HuRef | 16 | 75,406,208 - 75,419,708 (-) | NCBI | | HuRef | | | CHM1_1 | 16 | 91,122,139 - 91,134,975 (-) | NCBI | | CHM1_1 | | | T2T-CHM13v2.0 | 16 | 95,728,224 - 95,742,519 (-) | NCBI | | T2T-CHM13v2.0 | | |
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Chmp1a (Mus musculus - house mouse) |
Mouse Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCm39 | 8 | 123,931,000 - 123,939,527 (-) | NCBI | GRCm39 | GRCm39 | mm39 | | GRCm39 Ensembl | 8 | 123,931,003 - 123,939,502 (-) | Ensembl | | GRCm39 Ensembl | | | GRCm38 | 8 | 123,204,261 - 123,212,788 (-) | NCBI | GRCm38 | GRCm38 | mm10 | GRCm38 | GRCm38.p6 Ensembl | 8 | 123,204,264 - 123,212,763 (-) | Ensembl | GRCm38 | | mm10 | GRCm38 | MGSCv37 | 8 | 125,728,161 - 125,736,688 (-) | NCBI | GRCm37 | MGSCv37 | mm9 | NCBIm37 | MGSCv36 | 8 | 126,090,354 - 126,098,828 (-) | NCBI | | MGSCv36 | mm8 | | Celera | 8 | 127,435,808 - 127,451,781 (-) | NCBI | | Celera | | | Cytogenetic Map | 8 | E1 | NCBI | | | | | cM Map | 8 | 72.08 | NCBI | | | | |
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Chmp1a (Chinchilla lanigera - long-tailed chinchilla) |
Chinchilla Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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ChiLan1.0 Ensembl | NW_004955541 | 3,216,972 - 3,223,634 (-) | Ensembl | ChiLan1.0 | | | | ChiLan1.0 | NW_004955541 | 3,216,972 - 3,223,636 (-) | NCBI | ChiLan1.0 | ChiLan1.0 | | |
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CHMP1A (Pan paniscus - bonobo/pygmy chimpanzee) |
Bonobo Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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NHGRI_mPanPan1-v2 | 18 | 99,434,669 - 99,448,095 (-) | NCBI | | NHGRI_mPanPan1-v2 | | | NHGRI_mPanPan1 | 16 | 105,348,049 - 105,361,467 (-) | NCBI | | NHGRI_mPanPan1 | | | Mhudiblu_PPA_v0 | 16 | 70,398,021 - 70,411,383 (-) | NCBI | Mhudiblu_PPA_v0 | Mhudiblu_PPA_v0 | panPan3 | | PanPan1.1 | 16 | 90,003,892 - 90,017,653 (-) | NCBI | panpan1.1 | PanPan1.1 | panPan2 | | PanPan1.1 Ensembl | 16 | 90,003,892 - 90,017,653 (-) | Ensembl | panpan1.1 | | panPan2 | |
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CHMP1A (Canis lupus familiaris - dog) |
Dog Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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CanFam3.1 | 5 | 63,897,544 - 63,906,515 (+) | NCBI | CanFam3.1 | CanFam3.1 | canFam3 | CanFam3.1 | CanFam3.1 Ensembl | 5 | 63,897,594 - 63,905,550 (+) | Ensembl | CanFam3.1 | | canFam3 | CanFam3.1 | Dog10K_Boxer_Tasha | 5 | 63,910,397 - 63,919,629 (+) | NCBI | | Dog10K_Boxer_Tasha | | | ROS_Cfam_1.0 | 5 | 64,125,390 - 64,134,623 (+) | NCBI | | ROS_Cfam_1.0 | | | ROS_Cfam_1.0 Ensembl | 5 | 64,125,425 - 64,134,621 (+) | Ensembl | | ROS_Cfam_1.0 Ensembl | | | UMICH_Zoey_3.1 | 5 | 64,145,452 - 64,154,671 (+) | NCBI | | UMICH_Zoey_3.1 | | | UNSW_CanFamBas_1.0 | 5 | 63,983,044 - 63,992,276 (+) | NCBI | | UNSW_CanFamBas_1.0 | | | UU_Cfam_GSD_1.0 | 5 | 64,389,618 - 64,398,851 (+) | NCBI | | UU_Cfam_GSD_1.0 | | |
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Chmp1a (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
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CHMP1A (Sus scrofa - pig) |
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CHMP1A (Chlorocebus sabaeus - green monkey) |
Green Monkey Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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ChlSab1.1 | 5 | 74,990,706 - 75,002,074 (-) | NCBI | ChlSab1.1 | ChlSab1.1 | chlSab2 | | ChlSab1.1 Ensembl | 5 | 74,990,410 - 75,001,988 (-) | Ensembl | ChlSab1.1 | ChlSab1.1 Ensembl | chlSab2 | | Vero_WHO_p1.0 | NW_023666047 | 498,027 - 509,396 (+) | NCBI | Vero_WHO_p1.0 | Vero_WHO_p1.0 | | |
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Chmp1a (Heterocephalus glaber - naked mole-rat) |
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