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Gene: Prpf4b (pre-mRNA processing factor 4B) Rattus norvegicus
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Symbol: Prpf4b
Name: pre-mRNA processing factor 4B
Description: Predicted to have protein kinase activity. Predicted to be involved in protein phosphorylation. Predicted to localize to the catalytic step 2 spliceosome; chromosome; and nuclear speck. Orthologous to human PRPF4B (pre-mRNA processing factor 4B); INTERACTS WITH 2,4-dinitrotoluene; 2,6-dinitrotoluene; acrylamide.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: LOC291078; PRP4 pre-mRNA processing factor 4 homolog B; PRP4 pre-mRNA processing factor 4 homolog B (yeast); PRP4 pre-mRNA-processing factor 4 homolog; serine/threonine-protein kinase PRP4 homolog
Orthologs:
Homo sapiens (human) : PRPF4B (pre-mRNA processing factor 4B)  HGNC  Alliance
Mus musculus (house mouse) : Prpf4b (pre-mRNA processing factor 4B)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Prpf4b (pre-mRNA processing factor 4B)
Pan paniscus (bonobo/pygmy chimpanzee) : PRPF4B (pre-mRNA processing factor 4B)
Canis lupus familiaris (dog) : PRPF4B (pre-mRNA processing factor 4B)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Prpf4b (pre-mRNA processing factor 4B)
Sus scrofa (pig) : PRPF4B (pre-mRNA processing factor 4B)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01730,680,454 - 30,714,542 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1730,683,640 - 30,714,495 (-)Ensembl
Rnor_5.01732,580,447 - 32,614,537 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41736,319,606 - 36,350,616 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11736,322,446 - 36,353,457 (-)NCBI
Celera1729,558,539 - 29,589,473 (-)NCBICelera
Cytogenetic Map17p12NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
 
More on Prpf4b
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1307784
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2019-08-20
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.