Cm55 QTL Report (Rattus norvegicus) - Rat Genome Database

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QTL Registration

QTL: Cm55 (Cardiac mass QTL 55) Rattus norvegicus

Symbol: Cm55
Name: Cardiac mass QTL 55
RGD ID: 1581512
Previously known as: Lvm9
Trait: heart left ventricle mass   (VT:0007031)    
Measurement Type: heart left ventricle weight to body weight ratio   (CMO:0000530)    
LOD Score: 2.8
P Value: 0.05
Variance: 5.0
Inheritance Type: additive
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21727,027,949 - 56,836,890RGD_MAPPER_PIPELINEmRatBN7.2
Rnor_6.01727,690,959 - 61,794,615RGD_MAPPER_PIPELINERnor6.0
Rnor_5.01729,605,177 - 63,569,326RGDRnor5.0
RGSC_v3.41733,277,173 - 65,478,569RGDRGSC3.4
RGSC_v3.11733,280,173 - 65,489,194RGD
Cross Type: Not Available
Strains Crossed: WKY/Cfd WKHA/Cfd 
JBrowse: View Region in Genome Browser (JBrowse)
Model



Experimental Data Annotations    Click to see Annotation Detail View

Clinical Measurement
Object SymbolSpeciesTermQualifierEvidenceWithReferenceNotesSourceOriginal Reference(s)
Cm55Ratheart left ventricle weight to body weight ratio  IDA 1578726 RGD 

Experimental Condition
Object SymbolSpeciesTermQualifierEvidenceWithReferenceNotesSourceOriginal Reference(s)
Cm55Ratcontrol condition  IDA 1578726 RGD 

Measurement Method
Object SymbolSpeciesTermQualifierEvidenceWithReferenceNotesSourceOriginal Reference(s)
Cm55Ratpost excision weight measurement  IDA 1578726 RGD 

Rat Strain
Object SymbolSpeciesTermQualifierEvidenceWithReferenceNotesSourceOriginal Reference(s)
Cm55RatWKHA/Cfd  IEA 1578726 RGD 
Cm55RatWKY/Cfd  IEA 1578726 RGD 

Vertebrate Trait
Object SymbolSpeciesTermQualifierEvidenceWithReferenceNotesSourceOriginal Reference(s)
Cm55Ratheart left ventricle mass  IDA 1578726 RGD 

Experimental Data Annotations     Click to see Annotation Detail View

Experimental Condition

Measurement Method

Vertebrate Trait

Rat Strain
WKHA/Cfd  (IEA)
WKY/Cfd  (IEA)

References

References - curated
# Reference Title Reference Citation
1. Distinct QTLs are linked to cardiac left ventricular mass in a sex-specific manner in a normotensive inbred rat inter-cross. Llamas B, etal., Mamm Genome. 2005 Sep;16(9):700-11. Epub 2005 Oct 20.

Region

Genes in Region
The following Genes overlap with this region.    Full Report CSV TAB Printer Analysis Tools
RGD IDSymbolNameChrStartStopSpecies
1563601Tpi1l2triosephosphate isomerase 1 like 2172710143127102823Rat
6500583LOC100909970uncharacterized LOC100909970172717681727186106Rat
41022734LOC120097830uncharacterized LOC120097830172720362027213382Rat
41115616LOC120097899uncharacterized LOC120097899172724529327253746Rat
7584662LOC102549751uncharacterized LOC102549751172730850727321615Rat
40988637LOC120098041U1 spliceosomal RNA172733777527337940Rat
41289478LOC120097796uncharacterized LOC120097796172734273527349500Rat
6497764LOC100910628uncharacterized LOC100910628172734624427350547Rat
1309936Ly86lymphocyte antigen 86172741580727499695Rat
621495F13a1coagulation factor XIII A1 chain172781572327992494Rat
1564781Eno1-ps13enolase 1, pseudogene 13172802393328025229Rat
40976926LOC120097828uncharacterized LOC120097828172804854328051080Rat
621586Nrn1neuritin 1172812996928138898Rat
41223489LOC120097730uncharacterized LOC120097730172813469328137678Rat
41034711LOC120097996small nucleolar RNA SNORA17172820150128201626Rat
1309416Fars2phenylalanyl-tRNA synthetase 2, mitochondrial172831921528746217Rat
7672286Lyrm4LYR motif containing 4172874645728861849Rat
41372163Hdac1-ps16Histone deacetylase 1, pseudogene 16172884967128850978Rat
1308930Ppp1r3gprotein phosphatase 1, regulatory subunit 3G172887495628878288Rat
1310228Rpp40ribonuclease P/MRP subunit p40172894775228956788Rat
1549745Cdylchromodomain Y-like172898200929204345Rat
41292709LOC120097861uncharacterized LOC120097861172912686329136858Rat
1589720Rps7-ps16ribosomal protein S7, pseudogene 16172926770129268243Rat
41025517LOC120097993small nucleolar RNA SNORA17172956217729562309Rat
1561689Erp29-ps1endoplasmic reticulum protein 29, pseudogene 1172962366029628679Rat
1359427Eci2enoyl-CoA delta isomerase 2172985088429886781Rat
1310224Eci3enoyl-Coenzyme A delta isomerase 3172992196229943864Rat
1307537Tex56ptestis expressed 56172992985529966578Rat
1566214Fam217afamily with sequence similarity 217, member A172997502529981455Rat
1307784Prpf4bpre-mRNA processing factor 4B172998534330020285Rat
1589719Hmgb1-ps2high mobility group box 1, pseudogene 2173004087930042758Rat
1563458Fam50bfamily with sequence similarity 50, member B173017443130193627Rat
1311307Pxdc1PX domain containing 1173027599830304971Rat
620302Slc22a23solute carrier family 22, member 23173054410630709790Rat
1589955Psmg4proteasome assembly chaperone 4173071068230718035Rat
41325100LOC120097753uncharacterized LOC120097753173072935630731649Rat
7560629LOC102551220uncharacterized LOC102551220173074554230747619Rat
1309427Tubb2btubulin, beta 2B class IIb173074773430750781Rat
2320008Tubb2al1tubulin, beta 2A class IIa like 1173078574030791208Rat
1588452Tubb2atubulin, beta 2A class IIa173079684230800713Rat
1307572Bphlbiphenyl hydrolase like173080093930837277Rat
1310158Ripk1receptor interacting serine/threonine kinase 1173083963930871824Rat
735108Serpinb6aserpin family B member 6A173087146830989703Rat
1303320Nqo2N-ribosyldihydronicotinamide:quinone dehydrogenase 2173090948230938725Rat
7723369LOC102554685uncharacterized LOC102554685173095400130970983Rat
1564786Serpinb6el1serine (or cysteine) peptidase inhibitor, clade B, member 6e like 1173106870231085174Rat
1561697Serpinb6eserine (or cysteine) peptidase inhibitor, clade B, member 6e173117798531187261Rat
1308725Serpinb9dserine (or cysteine) peptidase inhibitor, clade B, member 9d173128643431294091Rat
1560658Serpinb1bserine (or cysteine) peptidase inhibitor, clade B, member 1b173132013531329151Rat
1562844Serpinb9bserine (or cysteine) peptidase inhibitor, clade B, member 9b173137819031386218Rat
1549730Serpinb9serpin family B member 9173142011831443237Rat
11429054LOC108348552uncharacterized LOC108348552173143107431436254Rat
1310452Serpinb6bserine (or cysteine) peptidase inhibitor, clade B, member 6b173145509231475460Rat
7582386LOC102555109uncharacterized LOC102555109173154067631544857Rat
41136285LOC120098022U2 spliceosomal RNA173158542531585513Rat
1306203Serpinb1aserpin family B member 1A173159069531599102Rat
628836Wrnip1WRN helicase interacting protein 1173162141031641659Rat
1565323RGD1565323similar to OTTMUSP00000000621173166171331678816Rat
6494757Mylk4myosin light chain kinase family, member 4173166902831747250Rat
41226905LOC120098054U6 spliceosomal RNA173168715831687268Rat
9327804Rps27a-ps20ribosomal protein S27a, pseudogene 20173171087731711529Rat
11408958LOC108348555uncharacterized LOC108348555173176936731775965Rat
1311008GmdsGDP-mannose 4, 6-dehydratase173209531532621975Rat
1589718Foxc1forkhead box C1173263137932635361Rat
41035220LOC120098017U2 spliceosomal RNA173282822332828285Rat
1589717Foxf2forkhead box F2173283573032842547Rat
41355240LOC120097779uncharacterized LOC120097779173284257832848184Rat
621572Foxq1forkhead box Q1173291274432915377Rat
41110843LOC120098004small nucleolar RNA SNORA17173312192033122044Rat
9173217LOC103694077uncharacterized LOC103694077173322894933251259Rat
6490193Rps9-ps1ribosomal protein S9, pseudogene 1173347005933470620Rat
619961Exoc2exocyst complex component 2173350628933698246Rat
1585035Hus1bHUS1 checkpoint clamp component B173353403233535199Rat
7707333Rps11-ps4ribosomal protein S11, pseudogene 4173355257233553085Rat
14398591Mir6319-1microRNA mir-6319-1173358671533586841Rat
41164048LOC120097838uncharacterized LOC120097838173358677133620238Rat
1308050Irf4interferon regulatory factor 4173372180033742570Rat
1307146Dusp22dual specificity phosphatase 22173378098033831241Rat
11471267LOC108348556uncharacterized LOC108348556173393810033941366Rat
7659104Gyg1-ps1glycogenin 1, pseudogene 1173396983933972043Rat
628838Uqcrfs1ubiquinol-cytochrome c reductase, Rieske iron-sulfur polypeptide 1173397790833982478Rat
2070Agtr1aangiotensin II receptor, type 1a173417344634226892Rat
1565561Mboat1membrane bound O-acyltransferase domain containing 1173433141334445088Rat
7530502Nono-ps6non-POU domain containing, octamer-binding, pseudogene 6173439690534398376Rat
41197145LOC120098016U2 spliceosomal RNA173443164734431825Rat
1561600E2f3E2F transcription factor 3173460175634679139Rat
1561310Rpl37l3ribosomal protein L37-like 3173470565834705976Rat
1310246Cdkal1CDK5 regulatory subunit associated protein 1-like 1173471870135271276Rat
41067460LOC120098014U2 spliceosomal RNA173474368234743788Rat
41313473LOC120093069threonylcarbamoyladenosine tRNA methylthiotransferase-like173485223835271276Rat
41300457LOC120097733uncharacterized LOC120097733173512906335142313Rat
41006362LOC120097731uncharacterized LOC120097731173520283535220004Rat
41015448LOC120098052U1 spliceosomal RNA173529101235291164Rat
41228821LOC120097975small nucleolar RNA SNORA67173529920635299336Rat
7546074LOC102548193uncharacterized LOC102548193173535019135355917Rat
6501716Ppp1r14b-ps1protein phosphatase 1, regulatory (inhibitor) subunit 14B, pseudogene173552639435527121Rat
6501250LOC100909866uncharacterized LOC100909866173556487135595211Rat
1309488Sox4SRY-box transcription factor 4173566780935672515Rat
1563300Rpl29l1ribosomal protein L29 like 1173572225135722729Rat
41209243LOC120097905uncharacterized LOC120097905173577622635777984Rat
40969358LOC120097904uncharacterized LOC120097904173617334636179528Rat
6500048H3f3al1H3.3 histone A like 1173625931436259721Rat
2319890Prl5a2l1prolactin family 5, subfamily A, member 2 like 1173630672436309710Rat
1583904Prl5a2prolactin family 5, subfamily A, member 2173645271236459054Rat
41378522LOC120097939prolactin-5A1-like173651657936526958Rat
620120Prl5a1prolactin family 5, subfamily A, member 1173658575436593192Rat
3404Prl4a1prolactin family 4, subfamily A, member 1173674101036748952Rat
2319750Lpcat4-ps1lysophosphatidylcholine acyltransferase 4, pseudogene 1173675727836758673Rat
1562878Prl2c1prolactin family 2, subfamily C, member 1173688109936889419Rat
620121Prl2a1prolactin family 2, subfamily A, member 1173693100036937092Rat
1593943Prl7c1prolactin family 7, subfamily c, member 1173697478336982243Rat
621307Prl7d1prolactin family 7, subfamily D, member 1173698274637053328Rat
620035Prl7a3prolactin family 7, subfamily A, member 3173708616437099039Rat
1359651Prl7a4prolactin family 7, subfamily A, member 4173714852437157580Rat
11392955Rpl7a-ps15ribosomal protein L7a, pseudogene 15173715915937162427Rat
7695636Prl7a1l-ps1prolactin family 7, subfamily a, member 1 like, pseudogene173717233337184610Rat
708582Prl7b1prolactin family 7, subfamily B, member 1173720205837214739Rat
41086015LOC120098040U6 spliceosomal RNA173721241337212519Rat
1582807Prl8a1prolactin family 8, subfamily a, member 1173724112837249237Rat
619862Prl8a9prolactin family 8, subfamily A, member 9173729505437300862Rat
2428Prl3d4prolactin family 3, subfamily D, member 4173732580437332641Rat
1582802Prl8a9-ps1prolactin family 8, subfamily A, member 9, pseudogene 1173737313237376797Rat
620116Prl8a4prolactin family 8, subfamily A, member 4173742996037436053Rat
708348Prl8a5prolactin family 8, subfamily A, member 5173746564137471852Rat
3406Prl8a3prolactin family 8, subfamily A, member 3173750832837514832Rat
1589715Eef1a1-ps21eukaryotic translation elongation factor 1 alpha 1, pseudogene 21173754449137546035Rat
620115Prl8a7prolactin family 8, subfamily A, member 7173755882237564724Rat
620118Prl2b1prolactin family 2, subfamily B, member 1173759115937598186Rat
2516Prl8a2prolactin family 8, subfamily A, member 2173761326337622288Rat
3405Prl6a1prolactin family 6, subfamily A, member 1173767523937680083Rat
731250Prl3a1prolactin family 3, subfamily A, member 1173769359537711904Rat
2429Prl3b1prolactin family 3, subfamily B, member 1173774368137749340Rat
69341Prl3c1prolactin family 3, subfamily C, member 1173778467437790468Rat
1582765Ppp2ca-ps1protein phosphatase 2 catalytic subunit alpha, pseudogene 1173779676737797976Rat
1582762Prl3d1prolactin family 3, subfamily D member 1173782302737829506Rat
3403Prlprolactin173785999937870062Rat
7702534Rpl19-ps10ribosomal protein L19, pseudogene 10173799638738030035Rat
1582750Tdg-ps3thymine-DNA glycosylase, pseudogene 3173814837438149739Rat
621012Hdgfl1HDGF like 1173820790638209902Rat
1589714Pkm-ps12pyruvate kinase M1/2, pseudogene 12173825670338258380Rat
41196493Prelid1-ps2PRELI domain containing 1, pseudogene 2173882156238822894Rat
7624352LOC102547708uncharacterized LOC102547708173889286938924239Rat
41130148LOC120097912uncharacterized LOC120097912173905559039074794Rat
11436884Trnap-agg16transfer RNA proline (anticodon AGG) 16173919791739197991Rat
41214770Trnap-agg58transfer RNA proline (anticodon AGG) 58173938142739381499Rat
1596974Tpi1-ps2triosephosphate isomerase 1, pseudogene 2173962332439628409Rat
1307833Nrsn1neurensin 1173980623839824550Rat
1310227Dcdc2doublecortin domain containing 2173984595240031781Rat
7652139Rpl32-ps10ribosomal protein L32, pseudogene 10174003478840035377Rat
708529Mrs2magnesium transporter MRS2174006392440087073Rat
631371Gpld1glycosylphosphatidylinositol specific phospholipase D1174008442740132035Rat
621422Aldh5a1aldehyde dehydrogenase 5 family, member A1174013233940158677Rat
1307443Kiaa0319KIAA0319 homolog174016251240226666Rat
1587113Rpl37-ps1ribosomal protein L37, pseudogene 1174016749940167862Rat
1560342Tdp2tyrosyl-DNA phosphodiesterase 2174022894340240337Rat
1306513Acot13acyl-CoA thioesterase 13174024037840252851Rat
6491729C17h6orf62similar to human chromosome 6 open reading frame 62174025621140267851Rat
1308137Gmnngeminin, DNA replication inhibitor174030177140310054Rat
7707229Armh2armadillo-like helical domain containing 2174031731940321924Rat
41335353LOC120098024U2 spliceosomal RNA174032110540321289Rat
1306939Ripor2RHO family interacting cell polarization regulator 2174032374840547482Rat
1311930Cmahcytidine monophospho-N-acetylneuraminic acid hydroxylase174055716140642350Rat
7522343LOC102552189uncharacterized LOC102552189174055979340618320Rat
41132204LOC120097967U6 spliceosomal RNA174056688540566980Rat
41089246LOC120098001small nucleolar RNA SNORA17174077469340774802Rat
1583868Ap1b1-ps1adaptor related protein complex 1 subunit beta 1, pseudogene 1174077906540782001Rat
1306623Carmil1capping protein regulator and myosin 1 linker 1174080792141088326Rat
41121482Sumo1-ps1small ubiquitin-like modifier 1, pseudogene 1174086797140870590Rat
40984707LOC120097824uncharacterized LOC120097824174089510040899698Rat
41005009LOC120097823uncharacterized LOC120097823174104173741047120Rat
1303281Scgnsecretagogin, EF-hand calcium binding protein174110668141148656Rat
6501968LOC100909739uncharacterized LOC100909739174113545841204291Rat
3854H2ac1H2A clustered histone 1174117132441171801Rat
3855H2bc1H2B clustered histone 1174117204141172510Rat
1584758Slc17a4solute carrier family 17, member 4174120154641218752Rat
620099Slc17a1solute carrier family 17 member 1174121946141255199Rat
628815Slc17a3solute carrier family 17 member 3174127080441300132Rat
1308821Slc17a2solute carrier family 17, member 2174131831241339012Rat
1596868Trim38tripartite motif containing 38174135185741365021Rat
1305706H1f1H1.1 linker histone, cluster member174136626841367011Rat
1598076H3c1H3 clustered histone 1174136837941368902Rat
7725170H4cl1histone H4C like 1174136874341426735Rat
7709329H3clH3 clustered histone like174137219441378877Rat
1564767Hist1h2afhistone cluster 1 H2A family member F174137940441379796Rat
7729692H2bc3H2B clustered histone 3174138005641380686Rat
1594367Hist1h2ahhistone cluster 1 H2A family member H174138452141385018Rat
1587893H1f2H1.2 linker histone, cluster member174139110641392597Rat
2322506Pced1a-ps1PC-esterase domain containing 1A, pseudogene 1174140160441404243Rat
2793Hfehomeostatic iron regulator174141345141421502Rat
2778H1f6H1.6 linker histone, cluster member174142736541428109Rat
1305011Hist1h2bqhistone cluster 1 H2B family member Q174143210041441487Rat
40979326Hist1h2anl1-ps2Histone cluster 1, H2an-like 1, pseudogene 2174144151641443077Rat
41261545LOC120097965U6 spliceosomal RNA174145655041456642Rat
2776H1f4H1.4 linker histone, cluster member174148657441487355Rat
2320230H2bc6H2B clustered histone 6174152077541521238Rat
1586732H3c13H3 clustered histone 13174153150241531971Rat
1586722H2ac23H2A clustered histone 23174153268541533271Rat
1586699H2bcl2H2B clustered histone like 2174153404841534478Rat
1309078Hist1h2anhistone cluster 1, H2an174153465341535259Rat
6498914H4f3-ps1H1.3 linker histone, cluster member, pseudogene 1174154225241556577Rat
41017428LOC120097727uncharacterized LOC120097727174154616841549385Rat
1585568H4f3H1.3 linker histone, cluster member174155152441552303Rat
2319827H2bc12l1H2B clustered histone 12 like 1174156254041562985Rat
1311554Hist1h2ail1histone cluster 1 H2a family member I like 1174156818141569093Rat
41047719H2ac10H2A clustered histone 10174157053241571020Rat
621439Hist1h2bghistone cluster 1, H2bg174157123441572202Rat
11438638Trnam-cau4transfer RNA methionine (anticodon CAU) 4174157618041576251Rat
11474935Trnar-ucg3transfer RNA arginine (anticodon UCG) 3174157999841580070Rat
11427922Trnas-gcu8transfer RNA serine (anticodon GCU) 8174158513141585212Rat
11462764Trnaq-uug2transfer RNA glutamine (anticodon UUG) 2174158730741587378Rat
11430337Trnaq-uug3transfer RNA glutamine (anticodon UUG) 3174158784141587912Rat
11359056Trnas-uga2transfer RNA serine (anticodon UGA) 2174158890341588984Rat
11416553Trnam-cau5transfer RNA methionine (anticodon CAU) 5174158936541589436Rat
11441119Trnaw-cca7transfer RNA tryptophan (anticodon CCA) 7174159897741599048Rat
11418896Trnar-ucg4transfer RNA arginine (anticodon UCG) 4174160126641601338Rat
11450768Trnas-aga6transfer RNA serine (anticodon AGA) 6174160466541604746Rat
11358050Trnar-acg4transfer RNA arginine (anticodon ACG) 4174160511041605182Rat
11451236Trnaw-cca8transfer RNA tryptophan (anticodon CCA) 8174160712341607194Rat
1306973Btn2a2butyrophilin, subfamily 2, member A2174162080741632621Rat
1306984Btn1a1butyrophilin, subfamily 1, member A1174165349941664246Rat
11451237Trnae-uuc10transfer RNA glutamic acid (anticodon UUC) 10174165704741657118Rat
41288305Trnal-cag9transfer RNA leucine (anticodon CAG) 9174166770441667786Rat
11422105Trnat-agu5transfer RNA threonine (anticodon AGU) 5174167217341672246Rat
40996861LOC120098034U6 spliceosomal RNA174167562541675731Rat
11454070Trnar-acg5transfer RNA arginine (anticodon ACG) 5174167622941676301Rat
11476617Trnav-cac4transfer RNA valine (anticodon CAC) 4174167688641676958Rat
11490736Trnaa-cgc2transfer RNA alanine (anticodon CGC) 2174168401841684089Rat
11412596Trnai-aau7transfer RNA isoleucine (anticodon AAU) 7174168460541684678Rat
41235417LOC120097977small nucleolar RNA SNORA44174168591241686040Rat
11388337Trnap-agg17transfer RNA proline (anticodon AGG) 17174168620341686274Rat
41063273Trnay-gua6transfer RNA tyrosine (anticodon GUA) 6174168973941689826Rat
40965321Trnay-gua5transfer RNA tyrosine (anticodon GUA) 5174169610441696188Rat
41256602Trnay-gua7transfer RNA tyrosine (anticodon GUA) 7174169641741696501Rat
40961720Trnay-guatransfer RNA tyrosine (anticodon GUA)174169733741697420Rat
1310785Abt1activator of basal transcription 1174169915141701253Rat
41225435Trnav-aac14transfer RNA valine (anticodon AAC) 14174171050441710576Rat
41052310Trnav-cactransfer RNA valine (anticodon CAC)174171191041711982Rat
11386218LOC108348562uncharacterized LOC108348562174173919741790603Rat
41082825Trnas-acutransfer RNA serine (anticodon ACU)174174467541744748Rat
1594230Zfp322azinc finger protein 322a174177378941789654Rat
11472361Trnam-cau6transfer RNA methionine (anticodon CAU) 6174180771541807787Rat
11472030Trnai-aau8transfer RNA isoleucine (anticodon AAU) 8174181167241811745Rat
11483266Trnav-cac6transfer RNA valine (anticodon CAC) 6174181838841818460Rat
11458077LOC108353148uncharacterized LOC108353148174182537341850990Rat
11395923Trnav-cac5transfer RNA valine (anticodon CAC) 5174184300441843076Rat
11481973Trnav-aac6transfer RNA valine (anticodon AAC) 6174184437041844442Rat
41373208Trnar-ucutransfer RNA arginine (anticodon UCU)174186188641861984Rat
2316378Vom1r-ps105vomeronasal 1 receptor pseudogene 105174186271941863491Rat
2316377Vom1r-ps106vomeronasal 1 receptor pseudogene 106174188844741888706Rat
2316376Vom1r-ps107vomeronasal 1 receptor pseudogene 107174189100141891891Rat
1589713Taf5l-ps2TATA-box binding protein associated factor 5 like, pseudogene 2174204689142049615Rat
1561897Uhmk1l1U2AF homology motif kinase 1l1174224164042243666Rat
11403004Trnas-gcu9transfer RNA serine (anticodon GCU) 9174246331142463392Rat
2325039H2bc9H2B clustered histone 9174247059342478590Rat
1597155Hist1h2achistone cluster 1 H2A family member C174247883642479306Rat
620814Hist1h4bhistone cluster 1 H4 family member B174248046742484912Rat
1593016H2bc12H2B clustered histone 12174248569942486162Rat
1593006H2ac12H2A clustered histone 12174248641542486880Rat
11470760Trnat-agu6transfer RNA threonine (anticodon AGU) 6174249299642493069Rat
11374956Trnai-aau9transfer RNA isoleucine (anticodon AAU) 9174249398442494057Rat
11463849Trnas-cga3transfer RNA serine (anticodon CGA) 3174250127642501357Rat
7606205LOC102556078uncharacterized LOC102556078174250174742509155Rat
11468428Trnar-acg6transfer RNA arginine (anticodon ACG) 6174250260842502680Rat
11394111Trnav-aac7transfer RNA valine (anticodon AAC) 7174250755642507628Rat
1306326Tada3lbtranscriptional adaptor 3 (NGG1 homolog, yeast)-like B174251022842511974Rat
1306652Prss16serine protease 16174251430642521885Rat
11422630Trnaq-cug7transfer RNA glutamine (anticodon CUG) 7174253494842535019Rat
11384777Trnas-gcu11transfer RNA serine (anticodon GCU) 11174253736042537441Rat
1594366Pom121l2POM121 transmembrane nucleoporin-like 2174254614442553447Rat
11440272Trnam-cau7transfer RNA methionine (anticodon CAU) 7174255729342557364Rat
1304798Zfp184zinc finger protein 184174258814042603905Rat
41008613Tufm-ps3Tu translation elongation factor, mitochondrial, pseudogene 3174259043142591728Rat
11439713Trnas-aga7transfer RNA serine (anticodon AGA) 7174260554942605630Rat
7575386LOC102555506uncharacterized LOC102555506174261340242620728Rat
11435663Trnas-aga8transfer RNA serine (anticodon AGA) 8174261564842615729Rat
11474770Trnaq-cug8transfer RNA glutamine (anticodon CUG) 8174261910642619177Rat
11467209Trnam-cau8transfer RNA methionine (anticodon CAU) 8174262223442622305Rat
11459487Trnas-aga9transfer RNA serine (anticodon AGA) 9174262513742625217Rat
11395456Trnas-uga3transfer RNA serine (anticodon UGA) 3174262807142628152Rat
11391621Trnaq-cug9transfer RNA glutamine (anticodon CUG) 9174263236742632438Rat
11410733Trnas-aga10transfer RNA serine (anticodon AGA) 10174263314142633222Rat
11467602Trnar-ucu7transfer RNA arginine (anticodon UCU) 7174263520342635288Rat
11509903Trnak-uuu5transfer RNA lysine (anticodon UUU) 5174264558742645659Rat
11462763Trnam-cau9transfer RNA methionine (anticodon CAU) 9174264637442646445Rat
11404861Trnai-uau3transfer RNA isoleucine (anticodon UAU) 3174265556342655656Rat
11441723Trnaf-gaa6transfer RNA phenylalanine (anticodon GAA) 6174266482342664895Rat
11365248Trnai-aau10transfer RNA isoleucine (anticodon AAU) 10174266562242665695Rat
41175676Trnat-agu14transfer RNA threonine (anticodon AGU) 14174268514542685218Rat
11465641Trnai-aau11transfer RNA isoleucine (anticodon AAU) 11174268592042685993Rat
1591796Hist1h2bchistone cluster 1, H2bc174269233542696601Rat
6497956Hist1h2anl2histone cluster 1, H2an like 2174269684542697423Rat
1306905Hist1h4mhistone cluster 1, H4m174269801642698420Rat
1304905Hist1h2aohistone cluster 1, H2ao174270474042705130Rat
9366689Ung-ps1uracil-DNA glycosylase, pseudogene 1174270609542707241Rat
9087157Hist1h2al1histone cluster 1 H2A family like 1174270795442708420Rat
1308088H2bc8H2B clustered histone 8174270865842709408Rat
1311828Hist1h2bohistone cluster 1 H2B family member O174271643342718046Rat
2321504Hist1h2aihistone cluster 1, H2ai174271831042718797Rat
1591702Hist1h3bhistone cluster 1, H3b174272345342723925Rat
1590638H1f5H1.5 linker histone, cluster member174272613242727162Rat
6499934H2bcl1H2B clustered histone like 1174275247142752941Rat
1562827hist1h2ail2histone cluster 1, H2ai-like2174275316042753620Rat
11470019Ost4-ps1oligosaccharyltransferase complex subunit 4, non-catalytic, pseudogene 1174275575742756821Rat
2321110H4cl3histone H4C like 3174277460042799175Rat
1307126Hist1h2bdhistone cluster 1 H2B family member D174279288742793268Rat
1589461H2ac4H2A clustered histone 4174279988442800387Rat
41126886H2bc12l-ps1H2B clustered histone 12 like, pseudogene 1174280040442801542Rat
11492389Trnam-cau10transfer RNA methionine (anticodon CAU) 10174280526542805336Rat
11397535Trnag-gcc8transfer RNA glycine (anticodon GCC) 8174280568342805753Rat
621794Or2b2olfactory receptor family 2 subfamily B member 2174281145242812393Rat
1332800Or2b2c-ps1olfactory receptor family 2 subfamily B member 2C, pseudogene 1174284843242849342Rat
1334337Or2w6b-ps1olfactory receptor family 2 subfamily W member 6B, pseudogene 1174286959242869922Rat
1333996Or2w6olfactory receptor family 2 subfamily W member 6174290645842907396Rat
41053466LOC120097985small nucleolar RNA SNORA48174294635242946492Rat
1333681Or2w2olfactory receptor family 2 subfamily W member 2174296455842965478Rat
1333190Or1f12-ps1olfactory receptor family 1 subfamily F member 12, pseudogene 1174303094343031880Rat
1308983Zkscan8zinc finger with KRAB and SCAN domains 8174303938343057391Rat
40943840Zfp420-ps1zinc finger protein 420, pseudogene 1174305772643066884Rat
41195547LOC120097740uncharacterized LOC120097740174310227343116434Rat
1309004Zkscan4zinc finger with KRAB and SCAN domains 4174310485343113101Rat
1311667NkaplNFKB activating protein-like174313509643136613Rat
727885Zscan26zinc finger and SCAN domain containing 26174314806343168070Rat
9685076Mir1896microRNA 1896174316528343165363Rat
9394854Pgbd1piggyBac transposable element derived 1174316827543198738Rat
41004241LOC120097923uncharacterized LOC120097923174320441743210678Rat
1305753Zkscan3zinc finger with KRAB and SCAN domains 3174321716843232828Rat
628738Zscan12zinc finger and SCAN domain containing 12174324725043253206Rat
41401873LOC120097820uncharacterized LOC120097820174326145743269071Rat
1566347Smarce1-ps1SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, pseudogene 1174331315443323603Rat
11363864Trnat-cgu3transfer RNA threonine (anticodon CGU) 3174340544043405513Rat
628789Gpx6glutathione peroxidase 6174340847243416091Rat
41164128LOC120097981small nucleolar RNA SNORA48174343215443432294Rat
69227Gpx5glutathione peroxidase 5174343612643443074Rat
11518303Trnar-ucg5transfer RNA arginine (anticodon UCG) 5174344988443449956Rat
11452152Trnat-ugu5transfer RNA threonine (anticodon UGU) 5174345273843452811Rat
11468708Trnaq-uug4transfer RNA glutamine (anticodon UUG) 4174346038343460454Rat
11418220Trnat-cgu4transfer RNA threonine (anticodon CGU) 4174346859243468665Rat
11446334Trnaa-agc15transfer RNA alanine (anticodon AGC) 15174347511543475186Rat
11412813Trnaa-cgc3transfer RNA alanine (anticodon CGC) 3174347925543479326Rat
11394767Trnat-agu7transfer RNA threonine (anticodon AGU) 7174348342943483502Rat
11476618Trnaa-agc16transfer RNA alanine (anticodon AGC) 16174348741343487484Rat
11380145Trnaa-agc17transfer RNA alanine (anticodon AGC) 17174348847543488546Rat
11503488Trnaa-ugc6transfer RNA alanine (anticodon UGC) 6174348965243489723Rat
11385663Trnaa-agc18transfer RNA alanine (anticodon AGC) 18174349970943499780Rat
11513908Trnaa-agc19transfer RNA alanine (anticodon AGC) 19174351214643512217Rat
11368087Trnar-ccg3transfer RNA arginine (anticodon CCG) 3174351958543519657Rat
11437631Trnal-caa2transfer RNA leucine (anticodon CAA) 2174352946043529564Rat
1310105Trim27tripartite motif-containing 27174353828243550633Rat
11406215Trnal-caa3transfer RNA leucine (anticodon CAA) 3174355734643557451Rat
11464131Trnaq-cug10transfer RNA glutamine (anticodon CUG) 10174355786343557934Rat
11428841Trnal-aag5transfer RNA leucine (anticodon AAG) 5174355962443559705Rat
11446177Trnal-aag6transfer RNA leucine (anticodon AAG) 6174355979343559874Rat
11481416Trnam-cau11transfer RNA methionine (anticodon CAU) 11174356015643560228Rat
7607859LOC102547106uncharacterized LOC102547106174356095443572339Rat
11457719Trnak-uuu6transfer RNA lysine (anticodon UUU) 6174356172443561796Rat
11463090Trnam-cau12transfer RNA methionine (anticodon CAU) 12174356221443562286Rat
11437423Trnaf-gaa7transfer RNA phenylalanine (anticodon GAA) 7174356657643566648Rat
11508988Trnae-cuc9transfer RNA glutamic acid (anticodon CUC) 9174356719443567265Rat
1333109Or2ad1olfactory receptor family 2 subfamily AD member 1174359516443596102Rat
40973146LOC120097979small nucleolar RNA SNORA2/SNORA34 family174360358243603718Rat
1334041Or2w1olfactory receptor family 2 subfamily W member 1174361198643612939Rat
6484939Or2w1colfactory receptor family 2 subfamily W member 1C174365021243652771Rat
1564243Zc3h15l1zinc finger CCCH-type containing 15 like 1174367044443671788Rat
1594365Set-ps14Set nuclear proto-oncogene, pseudogene 14174368585443702432Rat
9278669LOC103694098sorbitol dehydrogenase pseudogene174371150543713494Rat
1332759Or2p2olfactory receptor family 2 subfamily P member 2174373945943740409Rat
1560514Aoahacyloxyacyl hydrolase174380811044049458Rat
11494514LOC108348471glyceraldehyde-3-phosphate dehydrogenase pseudogene174400689344015579Rat
41212499LOC120098000small nucleolar RNA SNORA17174410950544109636Rat
41326641Fus-ps3FUS RNA binding protein, pseudogene 3174421633344216983Rat
1583590Hnrnpa1-ps11heterogeneous nuclear ribonucleoprotein A1, pseudogene 11174425432144255822Rat
1308182Elmo1engulfment and cell motility 1174428649544822668Rat
41124181LOC120097999small nucleolar RNA SNORA17174462327944623407Rat
1583544Krt18-ps6keratin 18, pseudogene 6174498827845067317Rat
727906Gpr141G protein-coupled receptor 141174511781845180053Rat
7675350Gpr141-ps1G protein-coupled receptor 141174520157345205489Rat
735069Nme8NME/NM23 family member 8174523702245304948Rat
621075Sfrp4secreted frizzled-related protein 4174527886745330806Rat
1359161Epdr1ependymin related 1174533393245358597Rat
41350807LOC120098033U6 spliceosomal RNA174543859445438700Rat
2319504Maip1-ps1matrix AAA peptidase interacting protein 1, pseudogene 1174544408145445646Rat
6492103Rpl9-ps1ribosomal protein L9, pseudogene 1174545337745481489Rat
1308633Stard3nlSTARD3 N-terminal like174558327845617226Rat
7503535TcrgT cell receptor gamma chain174562204145666123Rat
620274Amphamphiphysin174573938545982905Rat
11501383LOC108353132HAUS augmin-like complex subunit 6 pseudogene174583991245843776Rat
40926054LOC120098035U6 spliceosomal RNA174586376045863866Rat
41305259LOC120098006small nucleolar RNA SNORA17174600160946001738Rat
1560511Vps41VPS41 subunit of HOPS complex174606313246227533Rat
11494167LOC108348563uncharacterized LOC108348563174645384446472044Rat
1584652Pou6f2POU class 6 homeobox 2174647218246886796Rat
1596717Tgif2-ps1TGFB-induced factor homeobox 2, pseudogene 1174692954646932278Rat
9195373LOC103694101ZW10 interactor pseudogene174698624846988591Rat
1306613Yae1YAE1 maturation factor of ABCE1174702703347033549Rat
11485636LOC10835314460S ribosomal protein L7 pseudogene174706654547067812Rat
11437630Arf1-ps1ADP-ribosylation factor 1, pseudogene 1174707856047079282Rat
619851RalaRAS like proto-oncogene A174709216347145192Rat
41145206Pgam1-ps5phosphoglycerate mutase 1, pseudogene 5174722996247231795Rat
1311226Cdk13cyclin-dependent kinase 13174725114547344675Rat
1584365MplkipM-phase specific PLK1 interacting protein174737362447376199Rat
1308114SugctsuccinylCoA:glutarate-CoA transferase174737639248234362Rat
41343248LOC120097885uncharacterized LOC120097885174824039148249934Rat
11428585LOC108348564uncharacterized LOC108348564174829804748320825Rat
7611777LOC102549623uncharacterized LOC102549623174836133248408433Rat
41048167LOC120097772uncharacterized LOC120097772174837181448414332Rat
41202653LOC120097966U6 spliceosomal RNA174850953148509626Rat
40990385LOC120097752uncharacterized LOC120097752174873500548807075Rat
62074Inhbainhibin subunit beta A174909163549111573Rat
620272Gli3GLI family zinc finger 3174943856749709712Rat
40989647LOC120098021U2 spliceosomal RNA174951963549519728Rat
41363120LOC120098015U2 spliceosomal RNA174973537349735527Rat
1563690Rps6-ps4ribosomal protein S6, pseudogene 4174976579349766597Rat
1334357Or5bf1-ps1olfactory receptor family 5 subfamily BF member 1, pseudogene 1174997700149977400Rat
1597686Psme1-ps1proteasome activator subunit 1, pseudogene 1175017423350175012Rat
6498683Ppia-ps2peptidylprolyl isomerase A, pseudogene 2175026713850285702Rat
1596471Noc3l-ps1NOC3-like DNA replication regulator, pseudogene 1175033476050337072Rat
1310235Gabpb1lGA binding protein transcription factor, beta subunit 1-like175035683050358810Rat
2318687Hax1-ps1HCLS1 associated protein X-1, pseudogene 1175037065050371494Rat
1596446Hspd1-ps3heat shock protein family D (Hsp60) member 1, pseudogene 3175045928350462867Rat
1308147C17h7orf25similar to human chromosome 7 open reading frame 25175054323150549880Rat
61842Psma2proteasome 20S subunit alpha 2175055453650564923Rat
1310541Mrpl32mitochondrial ribosomal protein L32175056513350568000Rat
1561038Hecw1HECT, C2 and WW domain containing E3 ubiquitin protein ligase 1175067123951084536Rat
6489142Rbbp4-ps2RB binding protein 4, chromatin remodeling factor, pseudogene 2175083629950838226Rat
11374295LOC10834856740S ribosomal protein S19 pseudogene175089916950899788Rat
619919Arid4bAT-rich interaction domain 4B175113841951262894Rat
1359680Ggps1geranylgeranyl diphosphate synthase 1175126326251282471Rat
1305533Tbcetubulin folding cofactor E175129014351336090Rat
1306946B3galnt2beta-1,3-N-acetylgalactosaminyltransferase 2175133492151377469Rat
2318347Rps19l4ribosomal protein S19 like 4175136500551365544Rat
621559Kif5bkinesin family member 5B175148990451527508Rat
1310017Arhgap12Rho GTPase activating protein 12175158881051702417Rat
11460862Rps27-ps6ribosomal protein S27, pseudogene 6175174895251750448Rat
41106420LOC120097736uncharacterized LOC120097736175180036251841519Rat
7664285LOC102554214uncharacterized LOC102554214175189404751899141Rat
3831Zeb1zinc finger E-box binding homeobox 1175194894852116018Rat
41314205LOC120097729uncharacterized LOC120097729175208325452087110Rat
41058243LOC120097728translation initiation factor IF-2-like175211375852192794Rat
11486823LOC108348574uncharacterized LOC108348574175236311952426181Rat
40965894LOC120097983small nucleolar RNA SNORA48175238417052384307Rat
1307214Zfp438zinc finger protein 438175242622152547472Rat
7504252Hspa8-ps1heat shock protein family A (Hsp70) member 8, pseudogene 1175243874652440545Rat
9300452Ndufb3l3NADH:ubiquinone oxidoreductase subunit B3 like 3175249942752499893Rat
11509198LOC108348573uncharacterized LOC108348573175258293652589268Rat
1306354Svilsupervillin175264850252844114Rat
41313920LOC120097826uncharacterized LOC120097826175284918652856361Rat
1590169Rps24-ps12ribosomal protein S24, pseudogene 12175287186452872255Rat
7673560LOC102556228uncharacterized LOC102556228175291527352931670Rat
41314458LOC120097795uncharacterized LOC120097795175299128653030132Rat
1562037Jcadjunctional cadherin 5 associated175308938253130996Rat
7635257LOC102557539uncharacterized LOC102557539175313102853133757Rat
11476018LOC108348576uncharacterized LOC108348576175324203953263943Rat
40949735LOC120097757uncharacterized LOC120097757175328659353305454Rat
1310900Mtpapmitochondrial poly(A) polymerase175332073953341500Rat
620969Map3k8mitogen-activated protein kinase kinase kinase 8175338290853403216Rat
1564062Rpl27al1ribosomal protein L27A like 1175350348853504080Rat
1559869Lyzl1lysozyme-like 1175353043753543877Rat
41149856LOC120098025U2 spliceosomal RNA175366651953666669Rat
7742134LOC102552678uncharacterized LOC102552678175399708854016410Rat
621831BambiBMP and activin membrane-bound inhibitor175412125154125816Rat
15641294930596D02Rikl2RIKEN cDNA 4930596D02 gene like 2175415157254154198Rat
1310644Cul2cullin 2175416909354210197Rat
11403554LOC10834857760S ribosomal protein L29 pseudogene175418631254187090Rat
11359972LOC108348578uncharacterized LOC108348578175423139954239004Rat
2402CremcAMP responsive element modulator175423888954305989Rat
6498435Mki67-ps1marker of proliferation Ki-67, pseudogene 1175441415554415827Rat
1589712Hdac1-ps12Histone deacetylase 1, pseudogene 12175441745054419389Rat
2324280Epc1enhancer of polycomb homolog 1175450335854594444Rat
41373608LOC120097886ral guanine nucleotide dissociation stimulator-like175466487154667458Rat
9147085Fam95cfamily with sequence similarity 95 member C175468104054721106Rat
41319530LOC120097781ral guanine nucleotide dissociation stimulator-like175472078054728358Rat
41289469LOC120097863ral guanine nucleotide dissociation stimulator-like175474578054748331Rat
7544805LOC102553208ral guanine nucleotide dissociation stimulator-like175478059154783184Rat
1585457Ralgdsl8ral guanine nucleotide dissociation stimulator like 8175480056554808145Rat
15608604921524L21Rikl1RIKEN cDNA 4921524L21 gene like 1175480818454847675Rat
1589711Rps14-ps4ribosomal protein S14, pseudogene 4175490401954904610Rat
1308905Rab18RAB18, member RAS oncogene family175494409954976093Rat
1305652Mkxmohawk homeobox175507707355156877Rat
1306933Odad2outer dynein arm docking complex subunit 2175521687755409872Rat
41152666Ddx5-ps1DEAD-box helicase 5, pseudogene 1175524545455259642Rat
1593823Psme1l1proteasome activator subunit 1 like 1175529762755298808Rat
41151572LOC120098020U2 spliceosomal RNA175541452255414611Rat
1305675Mpp7MAGUK p55 scaffold protein 7175543993955706810Rat
41063315LOC120098009small Cajal body-specific RNA 20175582035855820490Rat
1562407WacWW domain containing adaptor with coiled-coil175592268655984286Rat
1586464Ddx5-ps3DEAD-box helicase 5, pseudogene 3175606927856070533Rat
1586445Hspa8-ps22heat shock protein family A (Hsp70) member 8, pseudogene 22175613329856135340Rat
1586431Rpl11-ps8ribosomal protein L11, pseudogene 8175617739356231616Rat
41139904LOC120097995small nucleolar RNA SNORA17175621668056216814Rat
1586418Snrpnl1small nuclear ribonucleoprotein polypeptide N like 1175637209656373049Rat
2323728Snurf-ps2SNRPN upstream open reading frame, pseudogene 2175637209656373411Rat
9098363LOC103694114DNA repair protein RAD51 homolog 1 pseudogene175669436556695323Rat

Markers in Region
The following Markers overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolExpected SizeChrStartStopSpeciesMatch
10119D17Arb4198173422548134225727Ratregion
10119D17Arb4198173422548134225872Ratregion
10119D17Arb4198173422556634225727Ratregion
10709D17Mgh3169174142981541429923Ratregion
11150D17Wox11134173787123537871375Ratregion
11151D17Wox18232173787115737871389Ratregion
33790D17Mit3201175348176653481960Ratregion
33860D17Mit10231175523786855238103Ratregion
33882D17Mit2125173199078431990913Ratregion
34120D17Mgh599175090909950909196Ratregion
34122D17Mgh8157175090909650909253Ratregion
34645D17Pas1339175278466452785007Ratregion
35985D17Rat20163173852519738525360Ratregion
36011D17Rat17168173583708535837242Ratregion
36107D17Rat29164175336728153367459Ratregion
36225D17Rat15136173136839131368534Ratregion
36259D17Rat19156174022395240224109Ratregion
36269D17Rat14141172743957027439721Ratregion
36329D17Rat32126175583607655836425Ratregion
36329D17Rat32126175583630655836425Ratregion
37322D17Rat69159173790963437909801Ratregion
37402D17Rat78154174054004140540197Ratregion
37432D5Rat110206175261353452613731Ratregion
35400D17Rat21138174804353148043665Ratregion
36996D17Rat31162175683672856836890Ratregion
37008D17Rat24156174956791149568080Ratregion
36614D17Rat22174174766694547667122Ratregion
36669D17Rat23175174799977347999948Ratregion
34809D17Rat26136174935480949354937Ratregion
34821D17Rat56128175648264756482769Ratregion
34827D17Rat12158172702794927028127Ratregion
35637D17Rat13160172783515427835317Ratregion
35697D17Rat16153173455084334551001Ratregion
35759D17Rat28152174327005243270204Ratregion
35791D17Rat57174175277856552778744Ratregion
35935D17Rat55173173935280339352968Ratregion
35951D17Rat27159174520628345206438Ratregion
38464D17Rat79204175349882853499042Ratregion
38590D17Rat77217173319889733199113Ratregion
38694D17Rat100214174314747743147685Ratregion
38780D17Rat64135175558322555583355Ratregion
40042D17Rat138159174715947147159638Ratregion
39202D17Rat88236174652758146527821Ratregion
39322D17Rat74241174722019347220440Ratregion
39346D17Rat67148172908699329087143Ratregion
42034D17Arb10230173787165137871885Ratregion
42040D17Arb14310173787115737871504Ratregion
41378D17Rat120143174118890041189037Ratregion
43094D17Rat147202173889051638890724Ratregion
43086D17Rat163136172944593829446060Ratregion
43088D17Rat162200173164329431643498Ratregion
43089D17Rat181170173189601031896169Ratregion
43090D17Rat164207175237150352371712Ratregion
42415D17Rat178203173260893032609135Ratregion
42416D17Rat179200173596462835964824Ratregion
42417D17Rat182233175345416153454384Ratregion
40902D17Rat119148174157414941574299Ratregion
41652D17Rat155144173213163632131780Ratregion
43095D17Rat167208174276606442766269Ratregion
43096D17Rat166134174674037246740501Ratregion
45466D17Got52158173623947236239629Ratregion
45467D17Got51292173607302736073321Ratregion
45469D17Got45184174020026640200450Ratregion
45470D17Got54270173934198939342259Ratregion
45471D17Got53292173819149338191785Ratregion
45472D17Got56242174609295746093197Ratregion
45472D17Got56242174609295746093371Ratregion
45473D17Got58284174667435346674639Ratregion
45474D17Got57124174691824246918366Ratregion
45475D17Got60160174832911248329274Ratregion
45476D17Got61123174884503848845161Ratregion
45477D17Got59177174861789948618076Ratregion
45478D17Got62214175125392151254135Ratregion
45479D17Got68196175027125050271446Ratregion
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5503234UniSTS:237391216174360327743603494Ratregion
5503821MARC_33810-33811:1053549243:1283175451715454517437Ratregion
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5507636Rnasep1342172895511928956732Ratregion
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5500951MARC_9759-9760:996688576:1309175490413854904449Ratregion
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5501748MARC_10647-10648:1000474126:1491173567195835672449Ratregion
5502072MARC_26445-26446:1030655521:1133173074912330749576Ratregion
5502072MARC_26445-26446:1030655521:1133173079868530799569Ratregion
5502194MARC_8191-8192:996688382:1782175099631750997099Ratregion
5505279Serpinb6c60173097800030978060Ratregion
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5502792TRIM27102174354707443547176Ratregion
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13207342rs1063874780174571672545716725Ratregion
Position Markers

Flank 1: (D17Rat12)
Rat AssemblyChrPosition (strand)Source
mRatBN7.21727,027,949 - 27,028,127 (+)MAPPER
Rnor_6.01727,690,959 - 27,691,136NCBI
Rnor_5.01729,605,177 - 29,605,354UniSTS
RGSC_v3.41733,277,173 - 33,277,509RGD
RGSC_v3.41733,277,332 - 33,277,509UniSTS
RGSC_v3.11733,280,173 - 33,280,350RGD
Celera1726,659,615 - 26,659,792UniSTS
RH 3.4 Map17341.4UniSTS
RH 3.4 Map17341.4RGD
RH 2.0 Map17254.9RGD
SHRSP x BN Map1721.7999RGD
FHH x ACI Map1727.8099RGD
Peak: (D17Mgh5)
Rat AssemblyChrPosition (strand)Source
mRatBN7.21750,909,099 - 50,909,196 (+)MAPPER
Rnor_6.01753,475,180 - 53,475,276NCBI
Rnor_5.01751,171,698 - 51,171,794UniSTS
RGSC_v3.41759,104,847 - 59,104,944RGD
RGSC_v3.41759,104,848 - 59,104,944UniSTS
RGSC_v3.11759,107,688 - 59,107,785RGD
Celera1746,929,911 - 46,930,007UniSTS
RH 3.4 Map17532.99UniSTS
RH 3.4 Map17532.99RGD
RH 2.0 Map17455.1RGD
SHRSP x BN Map1730.3699RGD
FHH x ACI Map1736.6499RGD
Cytogenetic Map17q12.1UniSTS
Flank 2: (D17Rat31)
Rat AssemblyChrPosition (strand)Source
mRatBN7.21756,836,728 - 56,836,890 (+)MAPPER
Rnor_6.01761,794,454 - 61,794,615NCBI
Rnor_5.01763,569,165 - 63,569,326UniSTS
RGSC_v3.41765,478,169 - 65,478,569RGD
RGSC_v3.41765,478,200 - 65,478,361UniSTS
RGSC_v3.11765,489,033 - 65,489,194RGD
Celera1758,132,144 - 58,132,305UniSTS
RH 3.4 Map17560.7UniSTS
RH 3.4 Map17560.7RGD
RH 2.0 Map17514.1RGD
SHRSP x BN Map1732.6999RGD
FHH x ACI Map1742.1599RGD


QTLs in Region (mRatBN7.2)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
2293664Bmd28Bone mineral density QTL 285.10.0001femur mineral mass (VT:0010011)trabecular volumetric bone mineral density (CMO:0001729)17435448727028127Rat
1354640Scl32Serum cholesterol level QTL 325.4blood HDL cholesterol amount (VT:0000184)blood high density lipoprotein cholesterol level (CMO:0000052)171578159260781592Rat
7411575Bw140Body weight QTL 14030.20.001body mass (VT:0001259)body weight gain (CMO:0000420)174856093586533673Rat
1300123Bp194Blood pressure QTL 1942.82arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)17211514934551001Rat
2302377Scl61Serum cholesterol level QTL 614.36blood HDL cholesterol amount (VT:0000184)serum high density lipoprotein cholesterol level (CMO:0000361)172738994653481766Rat
1354654Spl7Serum phospholipid level QTL 75.5blood phospholipid amount (VT:0006084)blood phospholipid level (CMO:0001169)175089090860781592Rat
70157Niddm32Non-insulin dependent diabetes mellitus QTL 324.34blood glucose amount (VT:0000188)blood glucose level area under curve (AUC) (CMO:0000350)172245492450909196Rat
1598871Memor5Memory QTL 55.3exploratory behavior trait (VT:0010471)total horizontal distance resulting from voluntary locomotion in an experimental apparatus (CMO:0001443)174054004180387013Rat
1354651Lmblg2Limb length QTL 26tibia length (VT:0004357)tibia length (CMO:0000450)17429913069599340Rat
1354628Stl13Serum triglyceride level QTL 133.8blood triglyceride amount (VT:0002644)blood triglyceride level (CMO:0000118)172129303960781592Rat
1354629Scl31Serum cholesterol level QTL 314.1blood cholesterol amount (VT:0000180)blood total cholesterol level (CMO:0000051)175089090860781592Rat
10401807Kidm52Kidney mass QTL 52kidney mass (VT:0002707)both kidneys wet weight (CMO:0000085)17131701463Rat
1354630Cm34Cardiac mass QTL 348.7heart left ventricle mass (VT:0007031)heart left ventricle wet weight (CMO:0000071)17429913069599340Rat
1559055Bp278Blood pressure QTL 2780.04arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)172365318468653184Rat
152025238Slep14Serum leptin concentration QTL 144.62blood leptin amount (VT:0005667)172418489079524188Rat
61466Niddm12Non-insulin dependent diabetes mellitus QTL 123.20.001blood glucose amount (VT:0000188)plasma glucose level (CMO:0000042)175402992960463637Rat
1354638Insul1Insulin level QTL 14.8blood insulin amount (VT:0001560)plasma insulin level (CMO:0000342)17429913069599340Rat
1354635Bp245Blood pressure QTL 2456arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)174207316069599340Rat
1331765Hrtrt15Heart rate QTL 154.094heart pumping trait (VT:2000009)heart rate (CMO:0000002)171533061355836425Rat
8694181Bw151Body weight QTL 1514.360.001body mass (VT:0001259)body weight gain (CMO:0000420)174856093586533673Rat
1300148Bp192Blood pressure QTL 1923.47arterial blood pressure trait (VT:2000000)blood pressure time series experimental set point of the baroreceptor response (CMO:0002593)173455084373951021Rat
2317060Aia26Adjuvant induced arthritis QTL 263.22joint integrity trait (VT:0010548)right rear ankle joint diameter (CMO:0002150)173828150983281509Rat
2303627Vencon8Ventilatory control QTL 80.001respiration trait (VT:0001943)tidal volume (CMO:0000222)17452803849528038Rat
70184BpQTLcluster14Blood pressure QTL cluster 143.38arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)17131990913Rat
4889955Bss93Bone structure and strength QTL 934.4tibia size trait (VT:0100001)tibia cortical bone volume to tibia total bone volume ratio (CMO:0001727)172702794960463643Rat
631207Niddm41Non-insulin dependent diabetes mellitus QTL 41blood glucose amount (VT:0000188)plasma glucose level (CMO:0000042)17137830672Rat
2324621Coatc5Coat color QTL 5coat/hair pigmentation trait (VT:0010463)pigmented ventral coat/hair area to total ventral coat/hair area ratio (CMO:0001812)173136839173951021Rat
2293648Bmd31Bone mineral density QTL 314.50.0001femur size trait (VT:1000369)femoral neck cortical cross-sectional area (CMO:0001702)17435448727028127Rat
1354662Rf49Renal function QTL 492.9blood creatinine amount (VT:0005328)plasma creatinine level (CMO:0000537)17169599340Rat
1354663Bvd5Brain ventricular dilatation QTL 53.510.001brain ventricle morphology trait (VT:0000822)hydrocephalus severity score (CMO:0001881)173199078481292925Rat
152023740Bp406Blood pressure QTL 4066.06arterial blood pressure trait (VT:2000000)172393042179524188Rat
7488966Bp370Blood pressure QTL 3700.001arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)172365318457246843Rat
1354658Spl8Serum phospholipid level QTL 83.8blood VLDL phospholipid amount (VT:0010507)blood very low density lipoprotein phospholipid level (CMO:0001571)17160781592Rat
152023737Bp405Blood pressure QTL 4055.06arterial blood pressure trait (VT:2000000)2393042179524188Rat
1354659Scl68Serum cholesterol level QTL 683.9blood VLDL cholesterol amount (VT:0005144)blood very low density lipoprotein cholesterol level (CMO:0000648)171578159260781592Rat
152023736Bp404Blood pressure QTL 4043.78arterial blood pressure trait (VT:2000000)172393042179524188Rat
724528Uae4Urinary albumin excretion QTL 44.90.0001urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)173583708569599340Rat
631497Bp98Blood pressure QTL 983.66arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)174135465160463643Rat
1354581Bp247Blood pressure QTL 2474.5arterial blood pressure trait (VT:2000000)pulse pressure (CMO:0000292)17169599340Rat
2300002Iddm36Insulin dependent diabetes mellitus QTL 361.98blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)17999128640540197Rat
631499Stl1Serum triglyceride level QTL 13.6blood triglyceride amount (VT:0002644)blood triglyceride level (CMO:0000118)17327139827389946Rat
1358295Aocep1Aortic cell protein QTL 16.17e-07thoracic aorta cellular protein amount (VT:0010598)aortic cell percentage174099000585990005Rat
152023626Bp403Blood pressure QTL 4033.86arterial blood pressure trait (VT:2000000)172393042179524188Rat
2301412Kidm40Kidney mass QTL 400.001kidney mass (VT:0002707)both kidneys wet weight to body weight ratio (CMO:0000340)173747984782479847Rat
1354588Bvd4Brain ventricular dilatation QTL 45.310.001brain ventricle morphology trait (VT:0000822)hydrocephalus severity score (CMO:0001881)175349882882479847Rat
9590107Sffal7Serum free fatty acids level QTL 74.810.001blood free fatty acid amount (VT:0001553)plasma free fatty acids level (CMO:0000546)172840914773409147Rat
2317038Ginf3Gastrointestinal inflammation QTL 32.890.005liver integrity trait (VT:0010547)liver granuloma severity score (CMO:0002157)174992015486533673Rat
724549Niddm56Non-insulin dependent diabetes mellitus QTL 560.03blood glucose amount (VT:0000188)blood glucose level area under curve (AUC) (CMO:0000350)173199078476990784Rat
1581512Cm55Cardiac mass QTL 552.80.05heart left ventricle mass (VT:0007031)heart left ventricle weight to body weight ratio (CMO:0000530)172702794956836890Rat
10054088Scort28Serum corticosterone level QTL 282.040.0102blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)17452803849528038Rat
61394Bp8Blood pressure QTL 82.2arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)172308056759555013Rat
10450503Bp386Blood pressure QTL 3860.28arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)173136839162109574Rat
2317054Aia12Adjuvant induced arthritis QTL 124.24joint integrity trait (VT:0010548)left rear ankle joint diameter (CMO:0002149)173828150983281509Rat
2313854Bp343Blood pressure QTL 3433.9life span trait (VT:0005372)age at time of death (CMO:0001193)173199078450909196Rat
2317053Aia25Adjuvant induced arthritis QTL 252.69joint integrity trait (VT:0010548)right rear ankle joint diameter (CMO:0002150)175090919660781426Rat
1354613Kidm14Kidney mass QTL 146.2kidney mass (VT:0002707)left kidney wet weight (CMO:0000083)17429913035837242Rat
8552928Pigfal9Plasma insulin-like growth factor 1 level QTL 99blood insulin-like growth factor amount (VT:0010479)plasma insulin-like growth factor 1 level (CMO:0001299)172840914773409147Rat
7394837Memor18Memory QTL 18exploratory behavior trait (VT:0010471)measurement of voluntary locomotion into, out of or within a discrete space in an experimental apparatus (CMO:0000957)175639647763640182Rat
12903980Cm120Cardiac mass QTL 1200.002heart right ventricle mass (VT:0007033)heart right ventricle weight to body weight ratio (CMO:0000914)172365318468653184Rat
4889891Eae32Experimental allergic encephalomyelitis QTL 324.80.0002nervous system integrity trait (VT:0010566)experimental autoimmune encephalomyelitis severity score (CMO:0001419)172702794936146731Rat
12903981Am17Aortic mass QTL 170.001aorta mass (VT:0002845)aorta weight to aorta length to body weight ratio (CMO:0002722)172365318468653184Rat
2303561Bw91Body weight QTL 912body mass (VT:0001259)body weight (CMO:0000012)17886846253868462Rat
12903982Kidm70Kidney mass QTL 700.001kidney mass (VT:0002707)both kidneys wet weight to body weight ratio (CMO:0000340)172365318470974005Rat
4889894Eae33Experimental allergic encephalomyelitis QTL 335.20.0001nervous system integrity trait (VT:0010566)experimental autoimmune encephalomyelitis severity score (CMO:0001419)175090909986022412Rat
12903978Cm118Cardiac mass QTL 1180.001heart mass (VT:0007028)heart wet weight to body weight ratio (CMO:0002408)172365318468653184Rat
1354619Bp242Blood pressure QTL 2426.3arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)172459934069599340Rat
12903979Cm119Cardiac mass QTL 1190.001heart left ventricle mass (VT:0007031)heart left ventricle weight to body weight ratio (CMO:0000530)172365318468653184Rat
1354596Bw32Body weight QTL 324.5body mass (VT:0001259)body weight (CMO:0000012)17429913060781592Rat
2303580Gluco49Glucose level QTL 492blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)175004027186533673Rat


Additional Information

RGD Curation Notes
Note Type Note Reference
qtl_statistics_details MapManager QTX used for linkage analysis; analysis was for male rats only 1578726