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Gene: Cdkal1 (CDK5 regulatory subunit associated protein 1-like 1) Rattus norvegicus
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Symbol: Cdkal1
Name: CDK5 regulatory subunit associated protein 1-like 1
Description: Predicted to have N6-threonylcarbomyladenosine methylthiotransferase activity. Predicted to be involved in maintenance of translational fidelity and tRNA methylthiolation. Predicted to localize to the rough endoplasmic reticulum. Human ortholog(s) of this gene implicated in diabetes mellitus; gestational diabetes; and type 2 diabetes mellitus. Orthologous to human CDKAL1 (CDK5 regulatory subunit associated protein 1 like 1); INTERACTS WITH (S)-10-[(DIMETHYLAMINO)METHYL]-4-ETHYL-4,9-DIHYDROXY-1H-PYRANO[3',4':6,7]INOLIZINO[1,2-B]-QUINOLINE-3,14(4H,12H)-DIONE; cadmium dichloride; diallyl disulfide.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: CDK5 regulatory subunit-associated protein 1-like 1; LOC361243; threonylcarbamoyladenosine tRNA methylthiotransferase
Orthologs:
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
NCBI Annotation Information: Annotation category: partial on reference assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01736,451,031 - 37,157,882 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1736,451,058 - 37,295,069 (+)Ensembl
Rnor_5.01737,759,260 - 37,935,320 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
Rnor_5.01738,780,937 - 39,026,953 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41741,208,037 - 41,259,863 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11741,211,591 - 42,031,602 (+)NCBI
Celera1734,245,172 - 34,795,596 (+)NCBICelera
Cytogenetic Map17p12NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
 
More on Cdkal1
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1310246
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2019-10-16
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.