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Gene: F13a1 (coagulation factor XIII A1 chain) Rattus norvegicus
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Symbol: F13a1
Name: coagulation factor XIII A1 chain
Description: Predicted to have protein-glutamine gamma-glutamyltransferase activity. Involved in blood coagulation. Predicted to localize to the cytoplasm and extracellular region. Biomarker of gastric ulcer. Human ortholog(s) of this gene implicated in artery disease (multiple); factor XIII deficiency; priapism; and thrombophilia (multiple). Orthologous to human F13A1 (coagulation factor XIII A chain); PARTICIPATES IN acenocoumarol pharmacodynamics pathway; alteplase pharmacodynamics pathway; aminocaproic acid pharmacodynamics pathway; INTERACTS WITH 2,2',4,4'-Tetrabromodiphenyl ether; 2,3,7,8-tetrachlorodibenzodioxine; 3,7-dihydropurine-6-thione.
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: coagulation factor XIII A chain; coagulation factor XIII, A1 polypeptide; coagulation factor XIII, A1 subunit; coagulation factor XIIIa; F13a; protein-glutamine gamma-glutamyltransferase A chain; transglutaminase A chain
Orthologs:
Homo sapiens (human) : F13A1 (coagulation factor XIII A chain)  HGNC  Alliance
Mus musculus (house mouse) : F13a1 (coagulation factor XIII, A1 subunit)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : F13a1 (coagulation factor XIII A chain)
Pan paniscus (bonobo/pygmy chimpanzee) : F13A1 (coagulation factor XIII A chain)
Canis lupus familiaris (dog) : F13A1 (coagulation factor XIII A chain)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : F13a1 (coagulation factor XIII A chain)
Sus scrofa (pig) : F13A1 (coagulation factor XIII A chain)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01728,504,650 - 28,680,015 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1728,504,623 - 28,680,362 (+)Ensembl
Rnor_5.01730,406,396 - 30,581,441 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41734,093,525 - 34,270,498 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11734,096,401 - 34,272,682 (+)NCBI
Celera1727,443,244 - 27,619,724 (+)NCBICelera
Cytogenetic Map17p12NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)
Damaging Variants

Additional Information

External Database Links
Nomenclature History
 
More on F13a1
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 621495
Created: 2002-08-06
Species: Rattus norvegicus
Last Modified: 2019-11-27
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.