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Gene: Epdr1 (ependymin related 1) Rattus norvegicus
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Symbol: Epdr1
Name: ependymin related 1
Description: Predicted to have calcium ion binding activity and lipid binding activity. Predicted to be involved in cell-matrix adhesion. Predicted to localize to the lysosome. Orthologous to human EPDR1 (ependymin related 1); INTERACTS WITH 1-naphthyl isothiocyanate; 2,3,7,8-tetrachlorodibenzodioxine; acrylamide.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: Epdr2; ependymin related protein 1; ependymin related protein 1 (zebrafish); ependymin related protein 2; ependymin related protein 2 (zebrafish); mammalian ependymin-related protein 1; MERP-1; MERP2; MGC94579; upregulated in colorectal cancer gene 1 protein
Orthologs:
Homo sapiens (human) : EPDR1 (ependymin related 1)  HGNC  Alliance
Mus musculus (house mouse) : Epdr1 (ependymin related protein 1 (zebrafish))  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Epdr1 (ependymin related 1)
Pan paniscus (bonobo/pygmy chimpanzee) : EPDR1 (ependymin related 1)
Canis lupus familiaris (dog) : EPDR1 (ependymin related 1)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Epdr1 (ependymin related 1)
Sus scrofa (pig) : EPDR1 (ependymin related 1)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01747,397,558 - 47,422,183 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1747,397,558 - 47,422,182 (+)Ensembl
Rnor_5.01756,066,896 - 56,091,673 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41753,135,000 - 53,160,954 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11753,137,840 - 53,163,794 (+)NCBI
Celera1751,170,240 - 51,195,039 (-)NCBICelera
Cytogenetic Map17q11NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
 
More on Epdr1
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1359161
Created: 2005-07-29
Species: Rattus norvegicus
Last Modified: 2019-10-16
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.