RH142226 Marker Search Result - Rat Genome Database

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Marker: RH142226

Symbol: RH142226
Previously known as:
RGD ID: 5052713
Expected Size: 154 (bp)
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21740,154,857 - 40,155,011 (+)MAPPERmRatBN7.2
Rnor_6.01742,155,594 - 42,155,747NCBIRnor6.0
Rnor_5.01744,023,393 - 44,023,546UniSTSRnor5.0
RGSC_v3.41747,216,263 - 47,216,416UniSTSRGSC3.4
Celera1739,792,380 - 39,792,533UniSTS
Cytogenetic Map17p11UniSTS
Is Marker For: Genes:   Aldh5a1  




#
Reference Title
Reference Citation
1. UniSTS Pipeline RGD automated pipelines


 
Forward Primer AGATCCATAGGGACATTCCATCC
Reverse Primer GCCACAGGTATATGGTGTCCATT
 


The following Genes overlap with this region.    Full Report CSV TAB Printer Analysis Tools
RGD ID
Symbol
Name
Chr
Start
Stop
Species
621422Aldh5a1aldehyde dehydrogenase 5 family, member A1174013233940158677Rat
RefSeq Transcripts NM_022851.1 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide L34821 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles


1 to 10 of 45 rows
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
1354581Bp247Blood pressure QTL 2474.5arterial blood pressure trait (VT:2000000)pulse pressure (CMO:0000292)17169599340Rat
2300002Iddm36Insulin dependent diabetes mellitus QTL 361.98blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)17999128640540197Rat
1354640Scl32Serum cholesterol level QTL 325.4blood HDL cholesterol amount (VT:0000184)blood high density lipoprotein cholesterol level (CMO:0000052)171578159260781592Rat
152023626Bp403Blood pressure QTL 4033.86arterial blood pressure trait (VT:2000000)172393042179524188Rat
2301412Kidm40Kidney mass QTL 400.001kidney mass (VT:0002707)both kidneys wet weight to body weight ratio (CMO:0000340)173747984782479847Rat
9590107Sffal7Serum free fatty acids level QTL 74.810.001blood free fatty acid amount (VT:0001553)plasma free fatty acids level (CMO:0000546)172840914773409147Rat
2302377Scl61Serum cholesterol level QTL 614.36blood HDL cholesterol amount (VT:0000184)serum high density lipoprotein cholesterol level (CMO:0000361)172738994653481766Rat
70157Niddm32Non-insulin dependent diabetes mellitus QTL 324.34blood glucose amount (VT:0000188)blood glucose level area under curve (AUC) (CMO:0000350)172245492450909196Rat
724549Niddm56Non-insulin dependent diabetes mellitus QTL 560.03blood glucose amount (VT:0000188)blood glucose level area under curve (AUC) (CMO:0000350)173199078476990784Rat
1354651Lmblg2Limb length QTL 26tibia length (VT:0004357)tibia length (CMO:0000450)17429913069599340Rat

1 to 10 of 45 rows


Database
Acc Id
Source(s)
NCBI Gene 291133 UniSTS