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Gene: Arid4b (AT-rich interaction domain 4B) Rattus norvegicus
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Symbol: Arid4b
Name: AT-rich interaction domain 4B
Description: Predicted to have transcription regulatory region DNA binding activity. Predicted to be involved in several processes, including establishment of Sertoli cell barrier; peptidyl-lysine trimethylation; and regulation of gene expression. Predicted to localize to the nucleus. Orthologous to human ARID4B (AT-rich interaction domain 4B); INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; acrylamide; ammonium chloride.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: 180 kDa Sin3-associated polypeptide; ARID domain-containing protein 4B; AT rich interactive domain 4B (Rbp1 like); AT-rich interactive domain-containing protein 4B; Bcaa; histone deacetylase complex subunit SAP180; retinoblastoma-binding protein 1-like 1; retinoblastoma-binding protein 1-related protein; sin3-associated polypeptide p180
Orthologs:
Homo sapiens (human) : ARID4B (AT-rich interaction domain 4B)  HGNC  Alliance
Mus musculus (house mouse) : Arid4b (AT rich interactive domain 4B (RBP1-like))  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Arid4b (AT-rich interaction domain 4B)
Pan paniscus (bonobo/pygmy chimpanzee) : ARID4B (AT-rich interaction domain 4B)
Canis lupus familiaris (dog) : ARID4B (AT-rich interaction domain 4B)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Arid4b (AT-rich interaction domain 4B)
Sus scrofa (pig) : ARID4B (AT-rich interaction domain 4B)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01753,831,353 - 53,955,897 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1753,833,023 - 53,915,076 (-)Ensembl
Rnor_5.01751,524,959 - 51,649,229 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41759,334,046 - 59,457,079 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11759,341,326 - 59,467,912 (-)NCBI
Celera1747,146,821 - 47,269,499 (-)NCBICelera
Cytogenetic Map17q12.1NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
 
More on Arid4b
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 619919
Created: 2002-08-06
Species: Rattus norvegicus
Last Modified: 2019-11-27
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.