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Gene: LOC102548682 (histone H4-like) Rattus norvegicus
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Symbol: LOC102548682
Name: histone H4-like
RGD ID: 7725170
Description: Predicted to have protein domain specific binding activity. Predicted to be involved in DNA replication-dependent nucleosome assembly; DNA replication-independent nucleosome assembly; and negative regulation of megakaryocyte differentiation. Predicted to localize to nuclear nucleosome. Orthologous to human H4C6 (H4 clustered histone 6); INTERACTS WITH 1,2-dimethylhydrazine (ortholog); 2,3,7,8-tetrachlorodibenzodioxine (ortholog); 4,4'-diaminodiphenylmethane (ortholog).
Type: protein-coding
RefSeq Status: MODEL
Also known as: histone H3; LOC679840; similar to germinal histone H4 gene; uncharacterized protein LOC102548682
Orthologs:
Homo sapiens (human) : H4C6 (H4 clustered histone 6)  HGNC  Alliance
Mus musculus (house mouse) : H4c2 (H4 clustered histone 2)  MGI  Alliance
Sus scrofa (pig) : LOC110261477 (histone H4)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01743,616,218 - 43,673,659 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1743,626,128 - 43,626,538 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_6.0 Ensembl2198,380,426 - 198,380,836 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_6.0 Ensembl1743,633,675 - 43,634,085 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_6.0 Ensembl1743,807,130 - 43,807,540 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_6.0 Ensembl2198,390,166 - 198,390,576 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_6.0 Ensembl1743,791,657 - 43,792,067 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_6.0 Ensembl2198,417,619 - 198,418,029 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_6.0 Ensembl1743,776,050 - 43,776,460 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01745,527,348 - 45,528,764 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41748,465,645 - 48,465,959 (-)NCBIRGSC3.4rn4RGSC3.4
Celera1740,999,848 - 41,058,244 (+)NCBICelera
Cytogenetic Map17p11NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


References - curated
References - uncurated

Genomics

Comparative Map Data
QTLs in Region (Rnor_6.0)

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome

Strain Variation

Strain Sequence Variants (Rnor 6.0)
Damaging Variants

Additional Information

External Database Links
Nomenclature History
 
More on LOC102548682
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 7725170
Created: 2013-12-18
Species: Rattus norvegicus
Last Modified: 2020-08-20
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.