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Gene: Trim27 (tripartite motif-containing 27) Rattus norvegicus
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Symbol: Trim27
Name: tripartite motif-containing 27
Description: Predicted to have identical protein binding activity and ubiquitin protein ligase activity. Predicted to be involved in several processes, including negative regulation of macromolecule metabolic process; negative regulation of viral process; and positive regulation of actin filament polymerization. Predicted to colocalize with the retromer complex. Orthologous to human TRIM27 (tripartite motif containing 27); INTERACTS WITH (+)-schisandrin B; 2,4-dinitrotoluene; flutamide.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: LOC291171; MGC189472; ret finger protein 1; ret finger protein 1 (mapped); Rfp1; Rfp1_mapped; tripartite motif protein 27; zinc finger protein RFP
Orthologs:
Homo sapiens (human) : TRIM27 (tripartite motif containing 27)  HGNC  Alliance
Mus musculus (house mouse) : Trim27 (tripartite motif-containing 27)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Trim27 (tripartite motif containing 27)
Pan paniscus (bonobo/pygmy chimpanzee) : TRIM27 (tripartite motif containing 27)
Canis lupus familiaris (dog) : TRIM27 (tripartite motif containing 27)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Trim27 (tripartite motif containing 27)
Sus scrofa (pig) : TRIM27 (tripartite motif containing 27)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01745,613,863 - 45,626,212 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1745,613,864 - 45,626,212 (-)Ensembl
Rnor_5.01757,844,089 - 57,856,503 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41751,192,286 - 51,204,942 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11751,195,447 - 51,214,144 (-)NCBI
Celera1752,928,787 - 52,941,136 (+)NCBICelera
Cytogenetic Map17q11NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
 
More on Trim27
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1310105
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2019-08-20
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.