D17Rat181 Marker Search Result - Rat Genome Database

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Marker: D17Rat181

Symbol: D17Rat181
Previously known as: oxsts9886; R0221-C10; 
RGD ID: 43089
Expected Size: 160 (bp)
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
GRCr81732,104,761 - 32,104,921 (+)Marker Load Pipeline
mRatBN7.21731,896,010 - 31,896,169 (+)MAPPERmRatBN7.2
Rnor_6.01733,208,959 - 33,209,117NCBIRnor6.0
Rnor_5.01735,100,574 - 35,100,732UniSTSRnor5.0
RGSC_v3.41738,257,211 - 38,257,371RGDRGSC3.4
RGSC_v3.41738,257,213 - 38,257,371UniSTSRGSC3.4
RGSC_v3.11738,260,052 - 38,260,212RGD
Celera1731,458,614 - 31,458,772UniSTS
SHRSP x BN Map1726.9699UniSTS
SHRSP x BN Map1726.9699RGD
Cytogenetic Map17p12UniSTS
Is Marker For: Strains:   SS.LEW-(D17Chm14-D17Rat181)/Ayd  
Genes:   RGD1565323  




#
Reference Title
Reference Citation
1. Data downloaded from Wellcome Trust, University of Oxford Data downloaded from Wellcome Trust, University of Oxford
2. Rat Genetic Map Data Rat Genetic Map Data, Whitehead Institute for Biomedical Research/MIT Center for Genome Research Website, http://waldo.wi.mit.edu/rat/public/distribution/rat_sslp_releases/jan00/
3. Electronic Transfer of SSLP Data Rat Genetic Mapping Project, Whitehead Institute for Biomedical Research. APR. 2001.
4. UniSTS Pipeline RGD automated pipelines


 
Forward Primer TTCAAGGACACAACTGAGGG
Reverse Primer GAAGACCCATTTAGATCCCCA
 
GenBank Nucleotide CH473977 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM000247 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles


1 to 10 of 42 rows
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
1354581Bp247Blood pressure QTL 2474.5arterial blood pressure trait (VT:2000000)pulse pressure (CMO:0000292)17169599340Rat
2300002Iddm36Insulin dependent diabetes mellitus QTL 361.98blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)17999128640540197Rat
1354640Scl32Serum cholesterol level QTL 325.4blood HDL cholesterol amount (VT:0000184)blood high density lipoprotein cholesterol level (CMO:0000052)171578159260781592Rat
152023626Bp403Blood pressure QTL 4033.86arterial blood pressure trait (VT:2000000)172393042179524188Rat
1300123Bp194Blood pressure QTL 1942.82arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)17211514934551001Rat
9590107Sffal7Serum free fatty acids level QTL 74.810.001blood free fatty acid amount (VT:0001553)plasma free fatty acids level (CMO:0000546)172840914773409147Rat
2302377Scl61Serum cholesterol level QTL 614.36blood HDL cholesterol amount (VT:0000184)serum high density lipoprotein cholesterol level (CMO:0000361)172738994653481766Rat
70157Niddm32Non-insulin dependent diabetes mellitus QTL 324.34blood glucose amount (VT:0000188)blood glucose level area under curve (AUC) (CMO:0000350)172245492450909196Rat
1354651Lmblg2Limb length QTL 26tibia length (VT:0004357)tibia length (CMO:0000450)17429913069599340Rat
1354628Stl13Serum triglyceride level QTL 133.8blood triglyceride amount (VT:0002644)blood triglyceride level (CMO:0000118)172129303960781592Rat

1 to 10 of 42 rows


Database
Acc Id
Source(s)
NCBI Gene 100302804 UniSTS
  691300 UniSTS