Gins1 (GINS complex subunit 1) - Rat Genome Database

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Gene: Gins1 (GINS complex subunit 1) Rattus norvegicus
Analyze
Symbol: Gins1
Name: GINS complex subunit 1
RGD ID: 1562246
Description: Predicted to be involved in DNA strand elongation involved in mitotic DNA replication and DNA unwinding involved in DNA replication. Predicted to act upstream of or within DNA replication and inner cell mass cell proliferation. Predicted to be located in cytoplasm and nucleus. Predicted to be part of CMG complex and GINS complex. Human ortholog(s) of this gene implicated in immunodeficiency 55. Orthologous to human GINS1 (GINS complex subunit 1); INTERACTS WITH 1-naphthyl isothiocyanate; 17beta-estradiol; 2,2',4,4'-Tetrabromodiphenyl ether.
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: DNA replication complex GINS protein PSF1; GINS complex subunit 1 (Psf1 homolog); LOC499914; RGD1562246; similar to Hypothetical UPF0080 protein KIAA0186
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: mRatBN7.2 - mRatBN7.2 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr83160,184,920 - 160,206,334 (+)NCBIGRCr8
mRatBN7.23139,724,513 - 139,745,930 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl3139,724,490 - 139,745,936 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx3143,620,798 - 143,642,222 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.03152,204,539 - 152,225,969 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.03149,953,061 - 149,974,539 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.03146,695,366 - 146,716,787 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl3146,695,344 - 146,716,816 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.03153,056,224 - 153,077,645 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.43141,535,210 - 141,557,391 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
Celera3138,486,128 - 138,506,715 (+)NCBICelera
Cytogenetic Map3q41NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
(-)-epigallocatechin 3-gallate  (ISO)
1,1-dichloroethene  (ISO)
1,2-dimethylhydrazine  (ISO)
1-naphthyl isothiocyanate  (EXP)
17beta-estradiol  (EXP,ISO)
2,2',4,4',5,5'-hexachlorobiphenyl  (ISO)
2,2',4,4'-Tetrabromodiphenyl ether  (EXP)
2,2',5,5'-tetrachlorobiphenyl  (ISO)
5-fluorouracil  (ISO)
6-propyl-2-thiouracil  (EXP)
acetamide  (EXP)
aflatoxin B1  (EXP,ISO)
all-trans-retinoic acid  (ISO)
amiodarone  (ISO)
aristolochic acid A  (ISO)
azathioprine  (ISO)
benzo[a]pyrene  (ISO)
benzo[a]pyrene diol epoxide I  (ISO)
bisphenol A  (EXP,ISO)
butanal  (ISO)
cadmium atom  (ISO)
cadmium dichloride  (ISO)
calcitriol  (ISO)
cannabidiol  (ISO)
carbon nanotube  (ISO)
chromium(6+)  (ISO)
cisplatin  (EXP,ISO)
cobalt dichloride  (ISO)
copper atom  (ISO)
copper(0)  (ISO)
copper(II) sulfate  (ISO)
cordycepin  (ISO)
coumestrol  (ISO)
Cuprizon  (EXP)
cyclosporin A  (ISO)
DDE  (ISO)
Dibutyl phosphate  (ISO)
dibutyl phthalate  (ISO)
dioxygen  (ISO)
Enterolactone  (ISO)
epoxiconazole  (ISO)
fenthion  (ISO)
flutamide  (EXP)
furan  (EXP)
genistein  (ISO)
isotretinoin  (ISO)
leflunomide  (ISO)
lidocaine  (EXP)
methidathion  (ISO)
methylparaben  (ISO)
N-Nitrosopyrrolidine  (ISO)
nickel sulfate  (ISO)
niclosamide  (ISO)
oxaliplatin  (EXP)
ozone  (ISO)
paracetamol  (ISO)
PCB138  (ISO)
perfluorononanoic acid  (ISO)
phenobarbital  (ISO)
pirinixic acid  (ISO)
piroxicam  (ISO)
potassium chromate  (ISO)
propanal  (ISO)
resveratrol  (ISO)
silicon dioxide  (ISO)
sodium arsenite  (ISO)
sodium dichromate  (EXP)
sunitinib  (ISO)
testosterone  (ISO)
tetrachloromethane  (ISO)
thioacetamide  (EXP)
thiram  (ISO)
titanium dioxide  (EXP,ISO)
topotecan  (EXP)
trimellitic anhydride  (ISO)
triptonide  (ISO)
tungsten  (ISO)
urethane  (ISO)
valproic acid  (ISO)

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component
CMG complex  (ISO)
cytoplasm  (ISO)
GINS complex  (IBA,ISO)
nucleus  (ISO)

Molecular Function

References

References - curated
# Reference Title Reference Citation
1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
3. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:10942595   PMID:12477932   PMID:16287864   PMID:16338220  


Genomics

Comparative Map Data
Gins1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr83160,184,920 - 160,206,334 (+)NCBIGRCr8
mRatBN7.23139,724,513 - 139,745,930 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl3139,724,490 - 139,745,936 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx3143,620,798 - 143,642,222 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.03152,204,539 - 152,225,969 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.03149,953,061 - 149,974,539 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.03146,695,366 - 146,716,787 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl3146,695,344 - 146,716,816 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.03153,056,224 - 153,077,645 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.43141,535,210 - 141,557,391 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
Celera3138,486,128 - 138,506,715 (+)NCBICelera
Cytogenetic Map3q41NCBI
GINS1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh382025,407,673 - 25,448,563 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl2025,391,008 - 25,452,700 (+)EnsemblGRCh38hg38GRCh38
GRCh372025,388,309 - 25,429,199 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 362025,336,323 - 25,377,191 (+)NCBINCBI36Build 36hg18NCBI36
Celera2025,462,070 - 25,502,910 (+)NCBICelera
Cytogenetic Map20p11.21NCBI
HuRef2025,345,645 - 25,386,888 (+)NCBIHuRef
CHM1_12025,388,730 - 25,429,596 (+)NCBICHM1_1
T2T-CHM13v2.02025,472,775 - 25,513,638 (+)NCBIT2T-CHM13v2.0
Gins1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm392150,751,482 - 150,773,200 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl2150,747,320 - 150,773,200 (+)EnsemblGRCm39 Ensembl
GRCm382150,909,556 - 150,931,280 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl2150,905,400 - 150,931,280 (+)EnsemblGRCm38mm10GRCm38
MGSCv372150,735,330 - 150,757,016 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv362150,596,841 - 150,622,721 (+)NCBIMGSCv36mm8
Celera2152,142,764 - 152,164,396 (+)NCBICelera
Cytogenetic Map2G3NCBI
cM Map274.75NCBI
Gins1
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495541531,341,021 - 31,367,135 (+)EnsemblChiLan1.0
ChiLan1.0NW_00495541531,341,021 - 31,363,069 (+)NCBIChiLan1.0ChiLan1.0
GINS1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v22126,283,597 - 26,324,796 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan12026,280,428 - 26,321,636 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v02025,352,711 - 25,393,926 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.12025,757,555 - 25,797,829 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl2025,757,555 - 25,797,829 (+)Ensemblpanpan1.1panPan2
GINS1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1231,567,723 - 1,598,910 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl231,567,825 - 1,590,464 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha231,597,240 - 1,636,505 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0231,808,093 - 1,847,392 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl231,808,143 - 1,831,086 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1231,648,965 - 1,688,237 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0231,773,410 - 1,812,684 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0231,740,946 - 1,780,245 (+)NCBIUU_Cfam_GSD_1.0
Gins1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024408640147,000,985 - 147,030,621 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_004936620422,230 - 446,753 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_004936620421,845 - 446,853 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
GINS1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1731,060,650 - 31,080,314 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11731,060,540 - 31,076,807 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21735,279,497 - 35,296,360 (-)NCBISscrofa10.2Sscrofa10.2susScr3
LOC103216161
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1256,448,443 - 56,467,908 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl256,448,392 - 56,467,712 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_0236660872,784,289 - 2,789,694 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Gins1
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_004624939176,929 - 205,642 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_004624939177,496 - 212,804 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Gins1
116 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:148
Count of miRNA genes:112
Interacting mature miRNAs:123
Transcripts:ENSRNOT00000010955
Prediction methods:Microtar, Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (mRatBN7.2)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
2312673Scl63Serum cholesterol level QTL 630.001blood cholesterol amount (VT:0000180)serum total cholesterol level (CMO:0000363)398535255168026850Rat
1598877Bp285Blood pressure QTL 2851.50.03arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)3120538241165538241Rat
1578653Vnigr3Vascular neointimal growth QTL 33.1artery morphology trait (VT:0002191)artery neointimal hyperplastic lesion area (CMO:0001414)3130656562169034231Rat
2302373Gluco39Glucose level QTL 395.01blood glucose amount (VT:0000188)blood glucose level area under curve (AUC) (CMO:0000350)398535386161695835Rat
70216Cm14Cardiac mass QTL 142.1heart mass (VT:0007028)heart wet weight (CMO:0000069)331172320163586636Rat
2292591Esta4Estrogen-induced thymic atrophy QTL 4thymus mass (VT:0004954)thymus wet weight (CMO:0000855)347233211147415807Rat
2298477Eau4Experimental allergic uveoretinitis QTL 40.0011uvea integrity trait (VT:0010551)experimental autoimmune uveitis score (CMO:0001504)3137398739169034231Rat
1581568Rf53Renal function QTL 53urine total protein amount (VT:0000032)urine protein excretion rate to body weight ratio (CMO:0001099)356395968161299569Rat
1578754Stresp16Stress response QTL 1640.001blood renin amount (VT:0003349)plasma renin activity level (CMO:0000116)3112681431157681431Rat
1300173Rf11Renal function QTL 113.38renal blood flow trait (VT:2000006)absolute change in renal blood flow rate (CMO:0001168)3121056165145956249Rat
9589106Insul23Insulin level QTL 2313.860.001blood insulin amount (VT:0001560)plasma insulin level (CMO:0000342)3131635904169034231Rat
10755461Coatc16Coat color QTL 16coat/hair pigmentation trait (VT:0010463)pigmented ventral coat/hair area to total ventral coat/hair area ratio (CMO:0001812)3122438700167438700Rat
8662816Vetf4Vascular elastic tissue fragility QTL 44renal artery integrity trait (VT:0010642)number of ruptures of the internal elastic lamina of the renal arteries (CMO:0002563)359242096157323038Rat
1559282Emca5Estrogen-induced mammary cancer QTL 53.9mammary gland integrity trait (VT:0010552)percentage of study population developing mammary tumors during a period of time (CMO:0000948)343827364169034231Rat
1354611Despr2Despair related QTL 23.030.0028locomotor behavior trait (VT:0001392)amount of time spent in voluntary immobility (CMO:0001043)397084464142084464Rat
2303620Vencon4Ventilatory control QTL 43.9respiration trait (VT:0001943)tidal volume (CMO:0000222)3127162703168026850Rat
631841Niddm39Non-insulin dependent diabetes mellitus QTL 393.36blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)394856903159898684Rat
1576306Schws3Schwannoma susceptibility QTL 30.001nervous system integrity trait (VT:0010566)percentage of study population developing trigeminal nerve neurilemmomas during a period of time (CMO:0002017)3118839124163839124Rat
619618Rf3Renal disease susceptibility QTL 36.50.001urine albumin amount (VT:0002871)urine albumin excretion rate to body weight ratio (CMO:0001270)3107693393152693393Rat
1300159Kidm4Kidney mass QTL 43.83kidney mass (VT:0002707)right kidney wet weight to body weight ratio (CMO:0001953)3121056165157309487Rat
2301971Cm71Cardiac mass QTL 714.63heart left ventricle mass (VT:0007031)heart left ventricle weight (CMO:0000776)341874578155617519Rat
2312659Slep7Serum leptin concentration QTL 70.001blood leptin amount (VT:0005667)serum leptin level (CMO:0000780)398535255168026850Rat
631673Iddm13Insulin dependent diabetes mellitus QTL 131.30.663blood glucose amount (VT:0000188)plasma glucose level (CMO:0000042)3130193298161695983Rat
2301970Bw81Body weight QTL 815.19body mass (VT:0001259)body weight (CMO:0000012)341874578155617519Rat
1581546Pur13Proteinuria QTL 132.930.0335urine total protein amount (VT:0000032)urine protein excretion rate (CMO:0000759)378196190146592722Rat
1578656Vnigr2Vascular neointimal growth QTL 24.2artery morphology trait (VT:0002191)lesioned artery residual lumen area (CMO:0001417)3130656562169034231Rat
8552952Pigfal13Plasma insulin-like growth factor 1 level QTL 13blood insulin-like growth factor amount (VT:0010479)plasma insulin-like growth factor 1 level (CMO:0001299)3138799500169034231Rat
631541Bp81Blood pressure QTL 814arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)3124122556169034231Rat
2293087Iddm27Insulin dependent diabetes mellitus QTL 272.68blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)397551417147415807Rat
2312670Bw94Body weight QTL 940.01inguinal fat pad mass (VT:0010424)inguinal fat pad weight to body weight ratio (CMO:0001253)398535255168026850Rat
724532Cm17Cardiac mass QTL 172heart mass (VT:0007028)calculated heart weight (CMO:0000073)395735366140735366Rat

Markers in Region
RH127530  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.23139,734,285 - 139,734,481 (+)MAPPERmRatBN7.2
mRatBN7.21741,700,904 - 41,701,100 (+)MAPPERmRatBN7.2
Rnor_6.01743,947,876 - 43,948,071NCBIRnor6.0
Rnor_6.03146,705,138 - 146,705,333NCBIRnor6.0
Rnor_5.01745,802,548 - 45,802,743UniSTSRnor5.0
Rnor_5.03153,065,996 - 153,066,191UniSTSRnor5.0
RGSC_v3.43141,544,981 - 141,545,176UniSTSRGSC3.4
RGSC_v3.41748,903,505 - 48,903,700UniSTSRGSC3.4
Celera1741,331,663 - 41,331,858UniSTS
Celera3138,495,902 - 138,496,097UniSTS
Cytogenetic Map3q41UniSTS
Cytogenetic Map17q11UniSTS


Expression

RNA-SEQ Expression

alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
nervous system
renal system
reproductive system
respiratory system
9 11 49 113 91 90 59 25 59 6 218 97 93 45 60 31

Sequence


Ensembl Acc Id: ENSRNOT00000010955   ⟹   ENSRNOP00000010955
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl3139,724,490 - 139,745,936 (+)Ensembl
Rnor_6.0 Ensembl3146,695,344 - 146,716,816 (+)Ensembl
RefSeq Acc Id: NM_001109207   ⟹   NP_001102677
RefSeq Status: VALIDATED
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr83160,184,920 - 160,206,334 (+)NCBI
mRatBN7.23139,724,513 - 139,745,930 (+)NCBI
Rnor_6.03146,695,366 - 146,716,787 (+)NCBI
Rnor_5.03153,056,224 - 153,077,645 (+)NCBI
RGSC_v3.43141,535,210 - 141,557,391 (+)RGD
Celera3138,486,128 - 138,506,715 (+)RGD
Sequence:
Protein Sequences
Protein RefSeqs NP_001102677 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein AAI66989 (Get FASTA)   NCBI Sequence Viewer  
  EDL86131 (Get FASTA)   NCBI Sequence Viewer  
  EDL86132 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSRNOP00000010955.3
RefSeq Acc Id: NP_001102677   ⟸   NM_001109207
- UniProtKB: B2RZ16 (UniProtKB/TrEMBL),   A6KHH3 (UniProtKB/TrEMBL),   F7EXT9 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSRNOP00000010955   ⟸   ENSRNOT00000010955
Protein Domains
GINS subunit

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-B2RZ16-F1-model_v2 AlphaFold B2RZ16 1-196 view protein structure

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen

Promoters
RGD ID:13692520
Promoter ID:EPDNEW_R3045
Type:multiple initiation site
Name:Gins1_1
Description:GINS complex subunit 1
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.03146,695,338 - 146,695,398EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene RGD:1562246 AgrOrtholog
BioCyc Gene G2FUF-47333 BioCyc
Ensembl Genes ENSRNOG00000008091 Ensembl, UniProtKB/TrEMBL
Ensembl Transcript ENSRNOT00000010955.6 UniProtKB/TrEMBL
Gene3D-CATH 1.20.58.1030 UniProtKB/TrEMBL
IMAGE_CLONE IMAGE:9098732 IMAGE-MGC_LOAD
InterPro GINS_A UniProtKB/TrEMBL
  GINS_bundle-like_dom UniProtKB/TrEMBL
  GINS_Psf1 UniProtKB/TrEMBL
KEGG Report rno:499914 UniProtKB/TrEMBL
MGC_CLONE MGC:189121 IMAGE-MGC_LOAD
NCBI Gene 499914 ENTREZGENE
PANTHER DNA REPLICATION COMPLEX GINS PROTEIN PSF1 UniProtKB/TrEMBL
  GINS_Psf1 UniProtKB/TrEMBL
Pfam Sld5 UniProtKB/TrEMBL
PhenoGen Gins1 PhenoGen
RatGTEx ENSRNOG00000008091 RatGTEx
Superfamily-SCOP SSF158573 UniProtKB/TrEMBL
UniProt A6KHH3 ENTREZGENE, UniProtKB/TrEMBL
  B2RZ16 ENTREZGENE
  F7EXT9 ENTREZGENE, UniProtKB/TrEMBL
UniProt Secondary B2RZ16 UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2016-03-29 Gins1  GINS complex subunit 1  Gins1  GINS complex subunit 1 (Psf1 homolog)  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2008-02-29 Gins1  GINS complex subunit 1 (Psf1 homolog)  RGD1562246_predicted  similar to Hypothetical UPF0080 protein KIAA0186 (predicted)  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2006-03-07 RGD1562246_predicted  similar to Hypothetical UPF0080 protein KIAA0186 (predicted)  LOC499914  similar to Hypothetical UPF0080 protein KIAA0186  Symbol and Name status set to approved 1299863 APPROVED
2006-02-09 LOC499914  similar to Hypothetical UPF0080 protein KIAA0186      Symbol and Name status set to provisional 70820 PROVISIONAL