ONTOLOGY REPORT - ANNOTATIONS
Term: DNA conformation change
Accession: GO:0071103
browse the term
Definition: A cellular process that results in a change in the spatial configuration of a DNA molecule. A conformation change can bend DNA, or alter the, twist, writhe, or linking number of a DNA molecule.
Synonyms: exact_synonym: DNA conformation modification
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Abl1
ABL proto-oncogene 1, non-receptor tyrosine kinase
involved_in
ISO IEA
(PMID:9558345) GO_REF:0000107
RGD Ensembl
PMID:9558345
GO_REF:0000107
NCBI chr 3:14,979,853...15,083,065
Ensembl chr 3:14,979,853...15,083,065
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Hhex
hematopoietically expressed homeobox
involved_in
ISO
(PMID:18755198)
RGD
PMID:18755198
NCBI chr 1:235,190,455...235,196,042
Ensembl chr 1:235,190,455...235,196,042
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Blm
BLM RecQ like helicase
involved_in
ISO IEA
(PMID:11735402) GO_REF:0000107 (PMID:26195664)
RGD Ensembl
PMID:11735402 PMID:26195664
GO_REF:0000107
NCBI chr 1:134,409,832...134,496,073
Ensembl chr 1:134,409,857...134,484,312
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Hmgb1
high mobility group box 1
acts_upstream_of_or_within involved_in
IDA ISS
PMID:10962007 GO_REF:0000024
AgBase
PMID:10962007
GO_REF:0000024, RGD:8554262
NCBI chr12:5,972,950...5,979,658
Ensembl chr12:5,901,586...5,978,565 Ensembl chr16:5,901,586...5,978,565
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Hmgb1l2
high mobility group box 1 like 2
involved_in
ISS
GO_REF:0000024
AgBase
GO_REF:0000024
NCBI chr X:107,671,273...107,672,015
Ensembl chr X:107,671,272...107,672,535
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Hnrnpa2b1
heterogeneous nuclear ribonucleoprotein A2/B1
involved_in
IDA
PMID:23184978
BHF-UCL
PMID:23184978
RGD:11567256
NCBI chr 4:80,534,659...80,545,297
Ensembl chr 4:80,534,651...80,545,249
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LOC134483981
high mobility group protein B1-like
involved_in
ISS
GO_REF:0000024
AgBase
GO_REF:0000024
Ensembl chr 1:222,796,915...222,798,193
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LOC134485624
high mobility group protein B1-like
involved_in
ISS
GO_REF:0000024
AgBase
GO_REF:0000024
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Mterf1
mitochondrial transcription termination factor 1
involved_in
ISO ISS
(PMID:20550934) GO_REF:0000024
RGD UniProt
PMID:20550934
GO_REF:0000024
NCBI chr 4:30,226,345...30,233,402
Ensembl chr 4:30,226,343...30,233,584
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Wrn
WRN RecQ like helicase
involved_in
ISO
(PMID:11735402) (PMID:26195664)
RGD
PMID:11735402 PMID:26195664
NCBI chr16:58,763,517...58,898,604
Ensembl chr16:58,763,504...58,895,450
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Ercc3
ERCC excision repair 3, TFIIH core complex helicase subunit
involved_in
ISO
(PMID:8663148)
RGD
PMID:8663148
NCBI chr18:23,883,613...23,914,326
Ensembl chr18:23,883,580...23,914,329
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Hmgb2
high mobility group box 2
involved_in
ISO ISS
(PMID:11275566) GO_REF:0000024
RGD AgBase
PMID:11275566
GO_REF:0000024
NCBI chr16:32,710,651...32,713,230
Ensembl chr16:32,710,658...32,713,140 Ensembl chr 1:32,710,658...32,713,140
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Hmgb2l1
high mobility group box 2-like 1
involved_in
ISS
GO_REF:0000024
AgBase
GO_REF:0000024
NCBI chr11:47,252,583...47,253,646
Ensembl chr11:47,252,569...47,253,669 Ensembl chr 1:47,252,569...47,253,669
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Hmgb2l2
high mobility group box 2 like 2
involved_in
ISS
GO_REF:0000024
AgBase
GO_REF:0000024
NCBI chr14:69,045,590...69,046,623
Ensembl chr14:69,045,641...69,046,640 Ensembl chr 1:69,045,641...69,046,640
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Top1
DNA topoisomerase I
acts_upstream_of_or_within involved_in
IDA IEA ISO IBA
GO_REF:0000107 GO_REF:0000002 (PMID:16261531), (PMID:7842491) GO_REF:0000033 GO_REF:0000104 (PMID:14594810), (PMID:14654701), (PMID:8567649), (PMID:8631793), (PMID:8631794), (PMID:9611241)
Ensembl InterPro RGD GO_Central UniProt
PMID:7842491 PMID:8567649 PMID:8631793 PMID:8631794 PMID:9611241 PMID:14594810 PMID:14654701 PMID:16261531 PMID:1332866 More...
GO_REF:0000002 GO_REF:0000033 GO_REF:0000104 GO_REF:0000107, RGD:1580856
NCBI chr 3:149,293,469...149,376,618
Ensembl chr 3:149,293,403...149,376,623
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Top1mt
DNA topoisomerase I mitochondrial
involved_in
IEA IBA
GO_REF:0000104 GO_REF:0000002 GO_REF:0000033
UniProt InterPro GO_Central
GO_REF:0000002 GO_REF:0000033 GO_REF:0000104
NCBI chr 7:107,338,092...107,368,125
Ensembl chr 7:107,342,527...107,366,049
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Top2a
DNA topoisomerase II alpha
involved_in acts_upstream_of_or_within
IDA IEA ISO
GO_REF:0000107 GO_REF:0000002 (PMID:22323612) (PMID:1331984), (PMID:9224616) GO_REF:0000104
Ensembl InterPro RGD UniProt
PMID:1331984 PMID:9224616 PMID:22323612 PMID:11334111
GO_REF:0000002 GO_REF:0000104 GO_REF:0000107, RGD:1580614
NCBI chr10:84,441,954...84,473,093
Ensembl chr10:83,945,735...83,976,874
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Top2b
DNA topoisomerase II beta
involved_in
ISO IEA
(PMID:10684600) GO_REF:0000002 GO_REF:0000104 GO_REF:0000107
RGD InterPro UniProt Ensembl
PMID:10684600
GO_REF:0000002 GO_REF:0000104 GO_REF:0000107
NCBI chr15:9,051,340...9,111,721
Ensembl chr15:9,051,341...9,112,085
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Top3a
DNA topoisomerase III alpha
involved_in
ISO IEA IBA
(PMID:20445207) GO_REF:0000107 GO_REF:0000002 GO_REF:0000033
RGD Ensembl InterPro GO_Central
PMID:20445207
GO_REF:0000002 GO_REF:0000033 GO_REF:0000107
NCBI chr10:45,419,219...45,457,356
Ensembl chr10:45,419,217...45,457,559
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Top3b
DNA topoisomerase III beta
involved_in
IBA IEA
GO_REF:0000033 GO_REF:0000002
GO_Central InterPro
GO_REF:0000002 GO_REF:0000033
NCBI chr11:84,097,018...84,125,474
Ensembl chr11:84,097,026...84,125,392
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