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ONTOLOGY REPORT - ANNOTATIONS

Term:DNA conformation change
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Accession:GO:0071103 term browser browse the term
Definition:A cellular process that results in a change in the spatial configuration of a DNA molecule. A conformation change can bend DNA, or alter the, twist, writhe, or linking number of a DNA molecule.
Synonyms:exact_synonym: DNA conformation modification


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DNA conformation change term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abl1 ABL proto-oncogene 1, non-receptor tyrosine kinase involved_in ISO (PMID:9558345) RGD PMID:9558345 NCBI chr 3:14,979,853...15,083,065
Ensembl chr 3:14,979,853...15,083,065 		JBrowse link
G Hhex hematopoietically expressed homeobox involved_in ISO (PMID:18755198) RGD PMID:18755198 NCBI chr 1:235,190,455...235,196,042
Ensembl chr 1:235,190,455...235,196,042 		JBrowse link
DNA duplex unwinding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AC129365.1 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 Ensembl chr 2:141,551,434...141,554,016 JBrowse link
G Anxa1 annexin A1 involved_in IDA
IEA		 GO_REF:0000118 TreeGrafter
RGD		 PMID:20655937 GO_REF:0000118, RGD:7421590 NCBI chr 1:217,861,175...217,877,205
Ensembl chr 1:217,861,175...217,877,343 		JBrowse link
G Ascc3 activating signal cointegrator 1 complex subunit 3 involved_in ISS
ISO		 GO_REF:0000024
(PMID:22055184)		 UniProt
RGD		 PMID:22055184 GO_REF:0000024 NCBI chr20:53,510,137...53,795,446
Ensembl chr20:53,510,184...53,790,165 		JBrowse link
G Blm BLM RecQ like helicase involved_in ISO (PMID:11735402), (PMID:24816114), (PMID:25901030) RGD PMID:11735402 PMID:24816114 PMID:25901030 NCBI chr 1:134,409,832...134,496,073
Ensembl chr 1:134,409,857...134,484,312 		JBrowse link
G Brip1 BRCA1 interacting helicase 1 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr10:70,907,266...71,031,502
Ensembl chr10:70,907,371...71,030,324 		JBrowse link
G Chd1l chromodomain helicase DNA binding protein 1-like involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 2:185,138,526...185,217,498
Ensembl chr 2:185,139,308...185,217,595 		JBrowse link
G Chd8 chromodomain helicase DNA binding protein 8 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr15:24,905,789...24,965,461
Ensembl chr15:24,905,789...24,951,285 		JBrowse link
G Chtf18 chromosome transmission fidelity factor 18 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr10:14,743,006...14,751,044
Ensembl chr10:14,742,621...14,751,050 		JBrowse link
G Chtf8 chromosome transmission fidelity factor 8 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr19:34,782,005...34,792,306
Ensembl chr19:34,781,856...34,792,578 		JBrowse link
G Ddx1 DEAD-box helicase 1 involved_in ISO
ISS		 (PMID:18710941)
GO_REF:0000024		 RGD
UniProt		 PMID:18710941 GO_REF:0000024 NCBI chr 6:35,996,469...36,027,340
Ensembl chr 6:35,996,469...36,027,365 		JBrowse link
G Ddx11 DEAD/H-box helicase 11 involved_in ISO
IBA		 (PMID:10648783), (PMID:18499658), (PMID:26503245)
GO_REF:0000033		 RGD
GO_Central		 PMID:10648783 PMID:18499658 PMID:26503245 GO_REF:0000033 NCBI chr 9:105,833,234...105,862,844
Ensembl chr 9:105,833,504...105,862,550 		JBrowse link
G Ddx3 DEAD-box helicase 3 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr13:98,520,538...98,523,707
Ensembl chr13:98,520,201...98,524,176 		JBrowse link
G Ddx3x DEAD-box helicase 3, X-linked involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr  X:9,479,532...9,493,169
Ensembl chr  X:9,479,532...9,493,168 		JBrowse link
G Dhx30 DExH-box helicase 30 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 8:110,064,751...110,096,954
Ensembl chr 8:110,064,752...110,097,381 		JBrowse link
G Dhx36 DEAH-box helicase 36 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 2:146,856,469...146,894,577
Ensembl chr 2:146,856,469...146,894,572 		JBrowse link
G Dhx9 DExH-box helicase 9 involved_in ISO (PMID:12711669), (PMID:21561811), (PMID:9111062) RGD PMID:9111062 PMID:12711669 PMID:21561811 NCBI chr13:65,602,322...65,639,098
Ensembl chr13:65,602,323...65,639,069 		JBrowse link
G Dna2 DNA replication helicase/nuclease 2 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr20:25,661,652...25,690,598
Ensembl chr20:25,662,055...25,716,319 		JBrowse link
G Dscc1 DNA replication and sister chromatid cohesion 1 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 7:86,482,588...86,498,212
Ensembl chr 7:86,482,588...86,498,212 		JBrowse link
G Dtd1 D-aminoacyl-tRNA deacylase 1 involved_in ISO (PMID:17264083) RGD PMID:17264083 NCBI chr 3:131,995,870...132,158,646
Ensembl chr 3:131,995,861...132,158,659 		JBrowse link
G ENSRNOG00000068893 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 Ensembl chr 9:106,007,571...106,018,505 JBrowse link
G ENSRNOG00000071060 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 Ensembl chr 9:106,081,218...106,093,755 JBrowse link
G Ercc2 ERCC excision repair 2, TFIIH core complex helicase subunit involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 1:79,033,342...79,047,102
Ensembl chr 1:79,033,326...79,047,102 		JBrowse link
G Ercc3 ERCC excision repair 3, TFIIH core complex helicase subunit involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr18:23,883,613...23,914,326
Ensembl chr18:23,883,580...23,914,329 		JBrowse link
G Fancm FA complementation group M involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 6:83,126,903...83,180,455
Ensembl chr 6:83,127,093...83,180,028 		JBrowse link
G Fbh1 F-box DNA helicase 1 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr17:66,749,506...66,787,590
Ensembl chr17:66,749,534...66,787,590 		JBrowse link
G G3bp1 G3BP stress granule assembly factor 1 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr10:39,586,864...39,620,268
Ensembl chr10:39,586,864...39,620,268 		JBrowse link
G Helb DNA helicase B involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000108
(MGI:2152689|PMID:11557815)		 GOC
RGD		 PMID:11557815 GO_REF:0000108 MGI:2152689 NCBI chr 7:55,588,510...55,615,979
Ensembl chr 7:55,588,798...55,615,585 		JBrowse link
G Helq helicase, POLQ-like involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr14:8,818,582...8,862,926
Ensembl chr14:8,818,592...8,862,960 		JBrowse link
G Hfm1 helicase for meiosis 1 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr14:2,857,251...2,943,766
Ensembl chr14:2,856,599...2,939,238 		JBrowse link
G Ighmbp2 immunoglobulin mu DNA binding protein 2 involved_in ISS
ISO
IEA		 GO_REF:0000024
(PMID:19158098), (PMID:30218034)
GO_REF:0000107		 UniProt
RGD
Ensembl		 PMID:19158098 PMID:30218034 GO_REF:0000024 GO_REF:0000107 NCBI chr 1:200,506,641...200,529,293
Ensembl chr 1:200,506,338...200,529,514 		JBrowse link
G Mcm6 minichromosome maintenance complex component 6 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr13:39,826,745...39,851,937
Ensembl chr13:39,826,763...39,851,960 		JBrowse link
G Mcm8 minichromosome maintenance 8 homologous recombination repair factor involved_in ISO
IEA		 (PMID:26300262)
GO_REF:0000002		 RGD
InterPro		 PMID:26300262 GO_REF:0000002 NCBI chr 3:120,086,741...120,117,008
Ensembl chr 3:120,086,763...120,117,008 		JBrowse link
G Mcm9 minichromosome maintenance 9 homologous recombination repair factor involved_in ISO
IEA		 (PMID:26300262)
GO_REF:0000107		 RGD
Ensembl		 PMID:26300262 GO_REF:0000107 NCBI chr20:32,818,219...32,929,577
Ensembl chr20:32,844,951...32,929,600 		JBrowse link
G Mcmdc2 minichromosome maintenance domain containing 2 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 5:9,291,967...9,337,526
Ensembl chr 5:9,298,101...9,338,300 		JBrowse link
G Mre11 MRE11 homolog, double strand break repair nuclease involved_in ISO
IEA		 (PMID:15790808)
GO_REF:0000107		 RGD
Ensembl		 PMID:15790808 GO_REF:0000107 NCBI chr 8:11,618,876...11,680,451
Ensembl chr 8:11,632,354...11,678,279 		JBrowse link
G Nav2 neuron navigator 2 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 1:98,957,629...99,322,339
Ensembl chr 1:98,663,759...99,322,337 		JBrowse link
G Nbn nibrin involved_in ISO
IEA
IBA		 (PMID:15790808)
GO_REF:0000118
GO_REF:0000033
GO_REF:0000107		 RGD
TreeGrafter
GO_Central
Ensembl		 PMID:15790808 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr 5:29,459,574...29,494,152
Ensembl chr 5:29,459,457...29,494,150 		JBrowse link
G Pif1 PIF1 5'-to-3' DNA helicase involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 8:66,110,641...66,120,202
Ensembl chr 8:66,111,072...66,120,200 		JBrowse link
G Polq DNA polymerase theta involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr11:63,673,796...63,775,905
Ensembl chr11:63,673,816...63,775,878 		JBrowse link
G Pot1 protection of telomeres 1 involved_in ISO (PMID:16030011) RGD PMID:16030011 NCBI chr 4:54,205,330...54,263,137
Ensembl chr 4:54,205,332...54,263,042 		JBrowse link
G Rad50 RAD50 double strand break repair protein involved_in ISO
IEA
IBA		 (PMID:15790808)
GO_REF:0000118
GO_REF:0000033
GO_REF:0000107		 RGD
TreeGrafter
GO_Central
Ensembl		 PMID:15790808 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr10:37,809,353...37,861,309
Ensembl chr10:37,808,726...37,861,396 		JBrowse link
G Recql RecQ like helicase involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 4:175,308,337...175,332,965
Ensembl chr 4:175,304,117...175,332,945 		JBrowse link
G Recql4 RecQ like helicase 4 involved_in ISO (PMID:19177149) RGD PMID:19177149 NCBI chr 7:108,423,453...108,430,790
Ensembl chr 7:108,423,455...108,430,619 		JBrowse link
G Rfc2 replication factor C subunit 2 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr12:22,120,449...22,133,576
Ensembl chr12:22,120,010...22,133,557 		JBrowse link
G Rfc3 replication factor C subunit 3 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr12:1,000,987...1,011,778
Ensembl chr12:1,000,994...1,011,778 		JBrowse link
G Rfc4 replication factor C subunit 4 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr11:77,749,642...77,764,123
Ensembl chr11:77,749,638...77,764,122 		JBrowse link
G Rfc5 replication factor C subunit 5 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr12:39,207,484...39,217,041
Ensembl chr12:39,207,484...39,217,312 		JBrowse link
G Rtel1 regulator of telomere elongation helicase 1 involved_in IEA
IBA
ISO		 GO_REF:0000108
GO_REF:0000033
(MGI:5522574|PMID:24115439)		 GOC
GO_Central
RGD		 PMID:24115439 GO_REF:0000033 GO_REF:0000108 MGI:5522574 NCBI chr 3:168,427,247...168,465,349
Ensembl chr 3:168,419,579...168,465,348 		JBrowse link
G Ruvbl1 RuvB-like AAA ATPase 1 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 4:120,932,486...120,967,400
Ensembl chr 4:120,932,417...121,029,384 		JBrowse link
G Ruvbl1-ps1 RuvB-like AAA ATPase 1, pseudogene 1 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr  X:1,640,138...1,641,886
Ensembl chr  X:1,640,300...1,641,811 		JBrowse link
G Ruvbl2 RuvB-like AAA ATPase 2 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 1:95,902,014...95,915,247
Ensembl chr 1:95,901,701...95,915,342 		JBrowse link
G Slc25a16 solute carrier family 25 member 16 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr20:25,691,474...25,717,558
Ensembl chr20:25,662,055...25,716,319 		JBrowse link
G Sub1 SUB1 regulator of transcription involved_in ISO (PMID:16605275) RGD PMID:16605275 NCBI chr 2:61,005,646...61,020,486
Ensembl chr 2:61,005,666...61,020,436
Ensembl chr 2:61,005,666...61,020,436 		JBrowse link
G Supv3l1 Suv3 like RNA helicase involved_in IEA
ISO
ISS		 GO_REF:0000107
(PMID:12466530)
GO_REF:0000024		 Ensembl
RGD
UniProt		 PMID:12466530 GO_REF:0000024 GO_REF:0000107 NCBI chr20:30,378,542...30,399,076
Ensembl chr20:30,378,550...30,399,054 		JBrowse link
G Trex1 three prime repair exonuclease 1 acts_upstream_of_or_within ISO (PMID:25848017) RGD PMID:25848017 NCBI chr 8:109,706,613...109,707,913
Ensembl chr 8:109,706,613...109,708,796 		JBrowse link
G Upf1 UPF1, RNA helicase and ATPase involved_in ISO (PMID:30218034) RGD PMID:30218034 NCBI chr16:19,076,594...19,097,365
Ensembl chr16:19,076,322...19,096,568 		JBrowse link
G Wrn WRN RecQ like helicase involved_in ISO (PMID:11735402), (PMID:26420422) RGD PMID:11735402 PMID:26420422 NCBI chr16:58,763,517...58,898,604
Ensembl chr16:58,763,504...58,895,450 		JBrowse link
G Wrnip1 WRN helicase interacting protein 1 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr17:31,621,410...31,641,659
Ensembl chr17:31,621,411...31,641,659 		JBrowse link
G Xrcc5 X-ray repair cross complementing 5 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 9:73,955,216...74,044,020
Ensembl chr 9:73,955,216...74,044,018 		JBrowse link
G Xrcc6 X-ray repair cross complementing 6 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 7:113,542,992...113,563,762
Ensembl chr 7:113,543,057...113,563,762 		JBrowse link
G Zgrf1 zinc finger, GRF-type containing 1 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 2:216,012,911...216,075,608
Ensembl chr 2:216,013,005...216,074,750 		JBrowse link
DNA geometric change term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hmgb1 high mobility group box 1 involved_in
acts_upstream_of_or_within		 ISS
IDA		 GO_REF:0000024
PMID:10962007		 AgBase PMID:10962007 GO_REF:0000024, RGD:8554262 NCBI chr12:5,972,950...5,979,658
Ensembl chr12:5,901,586...5,978,565
Ensembl chr16:5,901,586...5,978,565 		JBrowse link
G Hmgb1-ps8 high-mobility group box 1, pseudogene 8 involved_in ISS GO_REF:0000024 AgBase GO_REF:0000024 NCBI chr16:34,028,487...34,030,715
Ensembl chr16:34,028,446...34,030,648 		JBrowse link
G Hmgb1l2 high mobility group box 1 like 2 involved_in ISS GO_REF:0000024 AgBase GO_REF:0000024 NCBI chr  X:107,671,273...107,672,015
Ensembl chr  X:107,671,272...107,672,535 		JBrowse link
G Mterf1 mitochondrial transcription termination factor 1 involved_in ISO
ISS		 (PMID:20550934)
GO_REF:0000024		 RGD
UniProt		 PMID:20550934 GO_REF:0000024 NCBI chr 4:30,226,345...30,233,402
Ensembl chr 4:30,226,343...30,233,584 		JBrowse link
G Recql RecQ like helicase involved_in IEA GO_REF:0000117 UniProt GO_REF:0000117 NCBI chr 4:175,308,337...175,332,965
Ensembl chr 4:175,304,117...175,332,945 		JBrowse link
DNA rewinding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Zranb3 zinc finger RANBP2-type containing 3 involved_in ISO (PMID:21078962), (PMID:22705370) RGD PMID:21078962 PMID:22705370 NCBI chr13:39,440,653...39,595,782
Ensembl chr13:39,440,889...39,595,670 		JBrowse link
DNA topological change term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ercc3 ERCC excision repair 3, TFIIH core complex helicase subunit involved_in ISO (PMID:8663148) RGD PMID:8663148 NCBI chr18:23,883,613...23,914,326
Ensembl chr18:23,883,580...23,914,329 		JBrowse link
G Hmgb2 high mobility group box 2 involved_in ISO
ISS		 (PMID:11275566)
GO_REF:0000024		 RGD
AgBase		 PMID:11275566 GO_REF:0000024 NCBI chr16:32,710,651...32,713,230
Ensembl chr16:32,710,658...32,713,140 		JBrowse link
G Hmgb2l1 high mobility group box 2-like 1 involved_in ISS GO_REF:0000024 AgBase GO_REF:0000024 NCBI chr11:47,252,583...47,253,646
Ensembl chr11:47,252,569...47,253,669 		JBrowse link
G Hmgb2l2 high mobility group box 2 like 2 involved_in ISS GO_REF:0000024 AgBase GO_REF:0000024 NCBI chr14:69,045,590...69,046,623
Ensembl chr14:69,045,641...69,046,640 		JBrowse link
G Top1 DNA topoisomerase I acts_upstream_of_or_within
involved_in		 IDA
ISO
IBA
IEA		 (PMID:16261531), (PMID:7842491)
GO_REF:0000033
GO_REF:0000104
(PMID:14594810), (PMID:14654701), (PMID:8567649), (PMID:8631793), (PMID:8631794), (PMID:9611241)		 RGD
GO_Central
UniProt		 PMID:7842491 PMID:8567649 PMID:8631793 PMID:8631794 PMID:9611241 More... GO_REF:0000033 GO_REF:0000104, RGD:1580856 NCBI chr 3:149,293,469...149,376,618
Ensembl chr 3:149,293,403...149,376,623 		JBrowse link
G Top1mt DNA topoisomerase I mitochondrial involved_in IEA
IBA		 GO_REF:0000104
GO_REF:0000033		 UniProt
GO_Central		 GO_REF:0000033 GO_REF:0000104 NCBI chr 7:107,338,092...107,368,125
Ensembl chr 7:107,342,527...107,366,049 		JBrowse link
G Top2a DNA topoisomerase II alpha acts_upstream_of_or_within
involved_in		 IDA
ISO
IEA		 (PMID:1331984), (PMID:9224616)
(PMID:12711669), (PMID:22323612)
GO_REF:0000104		 RGD
UniProt		 PMID:1331984 PMID:9224616 PMID:12711669 PMID:22323612 PMID:11334111 GO_REF:0000104, RGD:1580614 NCBI chr10:83,945,731...83,976,874
Ensembl chr10:83,945,735...83,976,874 		JBrowse link
G Top2b DNA topoisomerase II beta involved_in ISO (PMID:10684600) RGD PMID:10684600 NCBI chr15:9,051,340...9,111,721
Ensembl chr15:9,051,341...9,112,085 		JBrowse link
G Top3a DNA topoisomerase III alpha involved_in ISO
IBA		 (PMID:20445207)
GO_REF:0000033		 RGD
GO_Central		 PMID:20445207 GO_REF:0000033 NCBI chr10:45,419,219...45,457,356
Ensembl chr10:45,419,217...45,457,559 		JBrowse link
G Top3b DNA topoisomerase III beta involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr11:84,097,018...84,125,474
Ensembl chr11:84,097,026...84,125,392 		JBrowse link
DNA unwinding involved in DNA replication term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AC129365.1 involved_in IEA GO_REF:0000118 TreeGrafter GO_REF:0000118 Ensembl chr 2:141,551,434...141,554,016 JBrowse link
G Blm BLM RecQ like helicase involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:134,409,832...134,496,073
Ensembl chr 1:134,409,857...134,484,312 		JBrowse link
G Cdc45 cell division cycle 45 involved_in ISO (PMID:22474384) RGD PMID:22474384 NCBI chr11:82,185,427...82,210,630
Ensembl chr11:82,185,473...82,210,619 		JBrowse link
G Gins1 GINS complex subunit 1 involved_in ISO (PMID:22474384) RGD PMID:22474384 NCBI chr 3:139,724,513...139,745,930
Ensembl chr 3:139,724,490...139,745,936 		JBrowse link
G Gins2 GINS complex subunit 2 involved_in ISO (PMID:22474384) RGD PMID:22474384 NCBI chr19:48,626,770...48,639,523
Ensembl chr19:48,626,770...48,639,339 		JBrowse link
G Gins3 GINS complex subunit 3 involved_in ISO (PMID:22474384) RGD PMID:22474384 NCBI chr19:9,420,085...9,428,621
Ensembl chr19:9,420,086...9,428,687 		JBrowse link
G Gins4 GINS complex subunit 4 involved_in ISO
IEA		 (PMID:22474384)
GO_REF:0000107		 RGD
Ensembl		 PMID:22474384 GO_REF:0000107 NCBI chr16:68,787,572...68,799,938
Ensembl chr16:68,767,339...68,802,273 		JBrowse link
G Mcm2 minichromosome maintenance complex component 2 involved_in
acts_upstream_of_or_within		 ISO
IBA		 (PMID:22474384)
(PMID:10531422)
GO_REF:0000033		 RGD
GO_Central		 PMID:10531422 PMID:22474384 GO_REF:0000033 NCBI chr 4:121,346,434...121,360,962
Ensembl chr 4:121,346,434...121,360,847 		JBrowse link
G Mcm3 minichromosome maintenance complex component 3 involved_in ISO (PMID:22474384) RGD PMID:22474384 NCBI chr 9:23,219,169...23,237,314
Ensembl chr 9:23,219,169...23,237,314 		JBrowse link
G Mcm4 minichromosome maintenance complex component 4 involved_in
acts_upstream_of_or_within		 ISO
IBA		 (PMID:22474384)
PR:P97311|PR:Q61881 (PMID:15917436)
GO_REF:0000033		 RGD
GO_Central		 PMID:15917436 PMID:22474384 GO_REF:0000033 NCBI chr11:85,258,443...85,272,144
Ensembl chr11:85,258,443...85,272,144 		JBrowse link
G Mcm5 minichromosome maintenance complex component 5 involved_in ISO (PMID:22474384) RGD PMID:22474384 NCBI chr19:13,483,030...13,504,389
Ensembl chr19:13,483,066...13,504,389 		JBrowse link
G Mcm6 minichromosome maintenance complex component 6 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
PR:P49717|PR:Q61881 (PMID:15917436)
GO_REF:0000118
(PMID:22474384)		 Ensembl
RGD
TreeGrafter		 PMID:15917436 PMID:22474384 GO_REF:0000107 GO_REF:0000118 NCBI chr13:39,826,745...39,851,937
Ensembl chr13:39,826,763...39,851,960 		JBrowse link
G Mcm7 minichromosome maintenance complex component 7 involved_in
acts_upstream_of_or_within		 ISO
IBA		 (PMID:22474384)
PR:P49717|PR:P97311 (PMID:15917436)
GO_REF:0000033		 RGD
GO_Central		 PMID:15917436 PMID:22474384 GO_REF:0000033 NCBI chr12:17,042,207...17,049,470
Ensembl chr12:17,042,212...17,050,063 		JBrowse link
G Pura purine rich element binding protein A involved_in ISO (PMID:15777841) RGD PMID:15777841 NCBI chr18:27,885,071...27,905,509
Ensembl chr18:27,884,556...27,905,513 		JBrowse link
G Rad51 RAD51 recombinase involved_in ISO (PMID:7988572) RGD PMID:7988572 NCBI chr 3:106,099,753...106,125,038
Ensembl chr 3:106,100,381...106,125,035 		JBrowse link
G Recql RecQ like helicase involved_in IEA
IBA		 GO_REF:0000118
GO_REF:0000033		 TreeGrafter
GO_Central		 GO_REF:0000033 GO_REF:0000118 NCBI chr 4:175,308,337...175,332,965
Ensembl chr 4:175,304,117...175,332,945 		JBrowse link
G Recql4 RecQ like helicase 4 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 7:108,423,453...108,430,790
Ensembl chr 7:108,423,455...108,430,619 		JBrowse link
G Recql5 RecQ like helicase 5 involved_in IEA
IBA		 GO_REF:0000118
GO_REF:0000033		 TreeGrafter
GO_Central		 GO_REF:0000033 GO_REF:0000118 NCBI chr10:101,126,544...101,165,739
Ensembl chr10:101,126,547...101,165,652 		JBrowse link
G Ssbp1 single stranded DNA binding protein 1 involved_in ISO
IEA		 (PMID:26446790)
GO_REF:0000107		 RGD
Ensembl		 PMID:26446790 GO_REF:0000107 NCBI chr 4:69,266,024...69,276,135
Ensembl chr 4:69,266,102...69,276,135 		JBrowse link
G Twnk twinkle mtDNA helicase involved_in
acts_upstream_of_or_within		 ISO (PMID:15167897)
(PMID:11431692)		 RGD PMID:11431692 PMID:15167897 NCBI chr 1:243,867,568...243,874,802
Ensembl chr 1:243,868,330...243,874,802 		JBrowse link
G Wrn WRN RecQ like helicase involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr16:58,763,517...58,898,604
Ensembl chr16:58,763,504...58,895,450 		JBrowse link
G-quadruplex DNA unwinding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Blm BLM RecQ like helicase involved_in ISO
IBA		 (PMID:11735402)
GO_REF:0000033
UniProtKB:O09053 (MGI:5700122|PMID:26195664)		 RGD
GO_Central		 PMID:11735402 PMID:26195664 GO_REF:0000033 MGI:5700122 NCBI chr 1:134,409,832...134,496,073
Ensembl chr 1:134,409,857...134,484,312 		JBrowse link
G Ddx11 DEAD/H-box helicase 11 involved_in ISO (PMID:26503245) RGD PMID:26503245 NCBI chr 9:105,833,234...105,862,844
Ensembl chr 9:105,833,504...105,862,550 		JBrowse link
G Dhx36 DEAH-box helicase 36 involved_in ISO
ISS		 (PMID:16150737), (PMID:18842585)
(MGI:6201778|PMID:25611385)
GO_REF:0000024		 RGD
UniProt		 PMID:16150737 PMID:18842585 PMID:25611385 GO_REF:0000024 MGI:6201778 NCBI chr 2:146,856,469...146,894,577
Ensembl chr 2:146,856,469...146,894,572 		JBrowse link
G Dhx9 DExH-box helicase 9 involved_in ISO (PMID:21561811) RGD PMID:21561811 NCBI chr13:65,602,322...65,639,098
Ensembl chr13:65,602,323...65,639,069 		JBrowse link
G Hnrnpa2b1 heterogeneous nuclear ribonucleoprotein A2/B1 involved_in IDA PMID:23184978 BHF-UCL PMID:23184978 RGD:11567256 NCBI chr 4:80,534,659...80,545,297
Ensembl chr 4:80,534,651...80,545,249 		JBrowse link
G Wrn WRN RecQ like helicase involved_in ISO
IBA		 (PMID:11735402)
GO_REF:0000033
UniProtKB:O88700 (MGI:5700122|PMID:26195664)		 RGD
GO_Central		 PMID:11735402 PMID:26195664 GO_REF:0000033 MGI:5700122 NCBI chr16:58,763,517...58,898,604
Ensembl chr16:58,763,504...58,895,450 		JBrowse link
negative regulation of DNA duplex unwinding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Sub1 SUB1 regulator of transcription involved_in ISO (PMID:16605275) RGD PMID:16605275 NCBI chr 2:61,005,646...61,020,486
Ensembl chr 2:61,005,666...61,020,436
Ensembl chr 2:61,005,666...61,020,436 		JBrowse link
G Top2a DNA topoisomerase II alpha involved_in ISO
ISS
IEA		 (PMID:12711669)
GO_REF:0000024
GO_REF:0000107		 RGD
UniProt
Ensembl		 PMID:12711669 GO_REF:0000024 GO_REF:0000107 NCBI chr10:83,945,731...83,976,874
Ensembl chr10:83,945,735...83,976,874 		JBrowse link
nucleotide-excision repair, DNA duplex unwinding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ercc3 ERCC excision repair 3, TFIIH core complex helicase subunit involved_in ISO (PMID:17466626) RGD PMID:17466626 NCBI chr18:23,883,613...23,914,326
Ensembl chr18:23,883,580...23,914,329 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20413
    cellular process 18812
      cellular component organization or biogenesis 7290
        cellular component organization 6980
          organelle organization 3887
            chromosome organization 583
              DNA conformation change 93
                DNA geometric change + 83
                DNA topological change 10
paths to the root