Imported Disease Annotations - CTDTerm | Qualifier | Evidence | With | Reference | Notes | Source | Original Reference(s) | Prostatic Neoplasms | | ISO | DHX30 (Homo sapiens) | 11554173 | CTD Direct Evidence: marker/mechanism | CTD | PMID:29610475 | |
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Imported Disease Annotations - CTDTerm | Qualifier | Evidence | With | Reference | Notes | Source | Original Reference(s) | Prostatic Neoplasms | | ISO | DHX30 (Homo sapiens) | 11554173 | CTD Direct Evidence: marker/mechanism | CTD | PMID:29610475 | |
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# | Reference Title | Reference Citation |
1. | Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. | Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27. |
2. | GOA pipeline | RGD automated data pipeline |
3. | Data Import for Chemical-Gene Interactions | RGD automated import pipeline for gene-chemical interactions |
4. | Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. | Strausberg RL, etal., Proc Natl Acad Sci U S A. 2002 Dec 24;99(26):16899-903. Epub 2002 Dec 11. |
5. | DEXH-Box protein DHX30 is required for optimal function of the zinc-finger antiviral protein. | Ye P, etal., Protein Cell. 2010 Oct;1(10):956-64. doi: 10.1007/s13238-010-0117-8. Epub 2010 Nov 9. |
PMID:15489334 | PMID:18063578 | PMID:21266579 | PMID:22658674 | PMID:22681889 | PMID:25219788 | PMID:25683715 | PMID:29100085 | PMID:31904090 |
Dhx30 (Rattus norvegicus - Norway rat) |
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DHX30 (Homo sapiens - human) |
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Dhx30 (Mus musculus - house mouse) |
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Dhx30 (Chinchilla lanigera - long-tailed chinchilla) |
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DHX30 (Pan paniscus - bonobo/pygmy chimpanzee) |
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DHX30 (Canis lupus familiaris - dog) |
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Dhx30 (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
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DHX30 (Sus scrofa - pig) |
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DHX30 (Chlorocebus sabaeus - green monkey) |
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Dhx30 (Heterocephalus glaber - naked mole-rat) |
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Variants in Dhx30
48 total Variants |
The detailed report is available here: | Full Report | CSV | TAB | Printer | ||||
miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/). For more information about miRGate, see PMID:25858286 or access the full paper here. |
The following QTLs overlap with this region. | Full Report | CSV | TAB | Printer | Gviewer |
AU015424 |
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BF393382 |
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Dhx30 |
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alimentary part of gastrointestinal system | circulatory system | endocrine system | exocrine system | hemolymphoid system | hepatobiliary system | integumental system | musculoskeletal system | nervous system | renal system | reproductive system | respiratory system | appendage | |
High | |||||||||||||
Medium | 3 | 38 | 53 | 37 | 19 | 37 | 5 | 8 | 74 | 35 | 41 | 11 | 5 |
Low | 5 | 4 | 4 | 4 | 3 | 3 | 3 | ||||||
Below cutoff |
RefSeq Transcripts | NM_001013249 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles |
XM_006243826 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_006243829 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_006243830 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_006243831 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_017595798 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_017595799 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_017595800 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_017595802 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_063265938 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
GenBank Nucleotide | AC128747 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles |
BC091359 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
CH473954 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
JAXUCZ010000008 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles |
RefSeq Acc Id: | ENSRNOT00000048764 ⟹ ENSRNOP00000043896 | ||||||||||||
Type: | CODING | ||||||||||||
Position: |
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RefSeq Acc Id: | ENSRNOT00000084838 ⟹ ENSRNOP00000069744 | ||||||||||||
Type: | CODING | ||||||||||||
Position: |
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RefSeq Acc Id: | ENSRNOT00000094963 ⟹ ENSRNOP00000096872 | ||||||||
Type: | CODING | ||||||||
Position: |
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RefSeq Acc Id: | ENSRNOT00000109037 ⟹ ENSRNOP00000089933 | ||||||||
Type: | CODING | ||||||||
Position: |
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RefSeq Acc Id: | ENSRNOT00000115057 ⟹ ENSRNOP00000077785 | ||||||||
Type: | CODING | ||||||||
Position: |
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RefSeq Acc Id: | ENSRNOT00000115080 ⟹ ENSRNOP00000095670 | ||||||||
Type: | CODING | ||||||||
Position: |
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RefSeq Acc Id: | NM_001013249 ⟹ NP_001013267 | ||||||||||||||||||||||||||||
RefSeq Status: | PROVISIONAL | ||||||||||||||||||||||||||||
Type: | CODING | ||||||||||||||||||||||||||||
Position: |
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Sequence: |
RefSeq Acc Id: | XM_006243826 ⟹ XP_006243888 | ||||||||||||||||||||
Type: | CODING | ||||||||||||||||||||
Position: |
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Sequence: |
RefSeq Acc Id: | XM_006243829 ⟹ XP_006243891 | ||||||||||||||||||||
Type: | CODING | ||||||||||||||||||||
Position: |
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Sequence: |
RefSeq Acc Id: | XM_006243831 ⟹ XP_006243893 | ||||||||||||||||||||
Type: | CODING | ||||||||||||||||||||
Position: |
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Sequence: |
RefSeq Acc Id: | XM_017595799 ⟹ XP_017451288 | ||||||||||||||||
Type: | CODING | ||||||||||||||||
Position: |
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Sequence: |
RefSeq Acc Id: | XM_017595800 ⟹ XP_017451289 | ||||||||||||||||
Type: | CODING | ||||||||||||||||
Position: |
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Sequence: |
RefSeq Acc Id: | XM_063265938 ⟹ XP_063122008 | ||||||||
Type: | CODING | ||||||||
Position: |
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Protein RefSeqs | NP_001013267 | (Get FASTA) | NCBI Sequence Viewer |
XP_006243888 | (Get FASTA) | NCBI Sequence Viewer | |
XP_006243891 | (Get FASTA) | NCBI Sequence Viewer | |
XP_006243893 | (Get FASTA) | NCBI Sequence Viewer | |
XP_017451288 | (Get FASTA) | NCBI Sequence Viewer | |
XP_017451289 | (Get FASTA) | NCBI Sequence Viewer | |
XP_063122008 | (Get FASTA) | NCBI Sequence Viewer | |
GenBank Protein | AAH91359 | (Get FASTA) | NCBI Sequence Viewer |
EDL77095 | (Get FASTA) | NCBI Sequence Viewer | |
EDL77096 | (Get FASTA) | NCBI Sequence Viewer | |
Ensembl Protein | ENSRNOP00000043896 | ||
ENSRNOP00000043896.5 | |||
ENSRNOP00000069744 | |||
ENSRNOP00000069744.2 | |||
ENSRNOP00000077785.1 | |||
ENSRNOP00000089933.1 | |||
ENSRNOP00000095670 | |||
ENSRNOP00000095670.1 | |||
ENSRNOP00000096872.1 | |||
ENSRNOP00055009852 | |||
ENSRNOP00060039178 | |||
ENSRNOP00065008312 | |||
GenBank Protein | Q5BJS0 | (Get FASTA) | NCBI Sequence Viewer |
RefSeq Acc Id: | NP_001013267 ⟸ NM_001013249 |
- UniProtKB: | Q5BJS0 (UniProtKB/Swiss-Prot), A0A8I5YC14 (UniProtKB/TrEMBL) |
- Sequence: |
RefSeq Acc Id: | XP_006243893 ⟸ XM_006243831 |
- Peptide Label: | isoform X5 |
- UniProtKB: | A0A8I6ARW5 (UniProtKB/TrEMBL) |
- Sequence: |
RefSeq Acc Id: | XP_006243891 ⟸ XM_006243829 |
- Peptide Label: | isoform X4 |
- UniProtKB: | A0A8I5YC14 (UniProtKB/TrEMBL) |
- Sequence: |
RefSeq Acc Id: | XP_006243888 ⟸ XM_006243826 |
- Peptide Label: | isoform X1 |
- UniProtKB: | A0A8L2QL99 (UniProtKB/TrEMBL), A6I3D1 (UniProtKB/TrEMBL), A0A8I5YC14 (UniProtKB/TrEMBL) |
- Sequence: |
RefSeq Acc Id: | XP_017451288 ⟸ XM_017595799 |
- Peptide Label: | isoform X2 |
- UniProtKB: | Q5BJS0 (UniProtKB/Swiss-Prot), A0A8I5YC14 (UniProtKB/TrEMBL) |
- Sequence: |
RefSeq Acc Id: | XP_017451289 ⟸ XM_017595800 |
- Peptide Label: | isoform X2 |
- UniProtKB: | Q5BJS0 (UniProtKB/Swiss-Prot), A0A8I5YC14 (UniProtKB/TrEMBL) |
- Sequence: |
RefSeq Acc Id: | ENSRNOP00000069744 ⟸ ENSRNOT00000084838 |
RefSeq Acc Id: | ENSRNOP00000043896 ⟸ ENSRNOT00000048764 |
RefSeq Acc Id: | ENSRNOP00000089933 ⟸ ENSRNOT00000109037 |
RefSeq Acc Id: | ENSRNOP00000095670 ⟸ ENSRNOT00000115080 |
RefSeq Acc Id: | ENSRNOP00000096872 ⟸ ENSRNOT00000094963 |
RefSeq Acc Id: | ENSRNOP00000077785 ⟸ ENSRNOT00000115057 |
RefSeq Acc Id: | XP_063122008 ⟸ XM_063265938 |
- Peptide Label: | isoform X3 |
Name | Modeler | Protein Id | AA Range | Protein Structure |
AF-Q5BJS0-F1-model_v2 | AlphaFold | Q5BJS0 | 1-1194 | view protein structure |
eQTL | View at Phenogen | |
WGCNA | View at Phenogen | |
Tissue/Strain Expression | View at Phenogen |
Database | Acc Id | Source(s) |
AGR Gene | RGD:1308888 | AgrOrtholog |
BioCyc Gene | G2FUF-29082 | BioCyc |
Ensembl Genes | ENSRNOG00000029194 | Ensembl, ENTREZGENE, UniProtKB/TrEMBL |
ENSRNOG00055007388 | UniProtKB/Swiss-Prot | |
ENSRNOG00060026882 | UniProtKB/Swiss-Prot | |
ENSRNOG00065007271 | UniProtKB/Swiss-Prot | |
Ensembl Transcript | ENSRNOT00000048764.6 | UniProtKB/TrEMBL |
ENSRNOT00000084838 | ENTREZGENE | |
ENSRNOT00000084838.2 | UniProtKB/TrEMBL | |
ENSRNOT00000094963.1 | UniProtKB/TrEMBL | |
ENSRNOT00000109037.1 | UniProtKB/TrEMBL | |
ENSRNOT00000115057.1 | UniProtKB/TrEMBL | |
ENSRNOT00000115080.1 | UniProtKB/TrEMBL | |
ENSRNOT00055012408 | UniProtKB/Swiss-Prot | |
ENSRNOT00060047102 | UniProtKB/Swiss-Prot | |
ENSRNOT00065011416 | UniProtKB/Swiss-Prot | |
Gene3D-CATH | 1.20.120.1080 | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL |
3.30.160.20 | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL | |
3.40.50.300 | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL | |
IMAGE_CLONE | IMAGE:7318733 | IMAGE-MGC_LOAD |
InterPro | DEAD/DEAH_box_helicase_dom | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL |
DNA/RNA_helicase_DEAH_CS | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL | |
DUF1605 | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL | |
Helicase-assoc_dom | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL | |
Helicase_ATP-bd | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL | |
Helicase_C | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL | |
P-loop_NTPase | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL | |
KEGG Report | rno:367172 | UniProtKB/Swiss-Prot |
MGC_CLONE | MGC:109411 | IMAGE-MGC_LOAD |
NCBI Gene | 367172 | ENTREZGENE |
PANTHER | ATP-DEPENDENT RNA HELICASE | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL |
ATP-DEPENDENT RNA HELICASE DHX30 | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL | |
Pfam | DEAD | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL |
HA2_C | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL | |
Helicase_C | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL | |
OB_NTP_bind | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL | |
PhenoGen | Dhx30 | PhenoGen |
PROSITE | DEAH_ATP_HELICASE | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL |
HELICASE_ATP_BIND_1 | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL | |
HELICASE_CTER | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL | |
RatGTEx | ENSRNOG00000029194 | RatGTEx |
ENSRNOG00055007388 | RatGTEx | |
ENSRNOG00060026882 | RatGTEx | |
ENSRNOG00065007271 | RatGTEx | |
SMART | DEXDc | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL |
HA2 | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL | |
HELICc | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL | |
Superfamily-SCOP | SSF52540 | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL |
UniProt | A0A0G2JW51_RAT | UniProtKB/TrEMBL |
A0A8I5YC14 | ENTREZGENE, UniProtKB/TrEMBL | |
A0A8I6ARW5 | ENTREZGENE, UniProtKB/TrEMBL | |
A0A8I6AU43_RAT | UniProtKB/TrEMBL | |
A0A8I6GHS9_RAT | UniProtKB/TrEMBL | |
A0A8L2QL99 | ENTREZGENE, UniProtKB/TrEMBL | |
A6I3D1 | ENTREZGENE, UniProtKB/TrEMBL | |
A6I3D2_RAT | UniProtKB/TrEMBL | |
DHX30_RAT | UniProtKB/Swiss-Prot, ENTREZGENE |
Date | Current Symbol | Current Name | Previous Symbol | Previous Name | Description | Reference | Status |
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2016-10-05 | Dhx30 | DExH-box helicase 30 | Dhx30 | DEAH-box helicase 30 | Nomenclature updated to reflect human and mouse nomenclature | 1299863 | APPROVED |
2016-01-13 | Dhx30 | DEAH-box helicase 30 | Dhx30 | DEAH (Asp-Glu-Ala-His) box helicase 30 | Nomenclature updated to reflect human and mouse nomenclature | 1299863 | APPROVED |
2013-08-01 | Dhx30 | DEAH (Asp-Glu-Ala-His) box helicase 30 | Dhx30 | DEAH (Asp-Glu-Ala-His) box polypeptide 30 | Nomenclature updated to reflect human and mouse nomenclature | 1299863 | APPROVED |
2005-12-06 | Dhx30 | DEAH (Asp-Glu-Ala-His) box polypeptide 30 | Dhx30_predicted | DEAH (Asp-Glu-Ala-His) box polypeptide 30 (predicted) | Symbol and Name updated | 1559027 | APPROVED |
2005-01-12 | Dhx30_predicted | DEAH (Asp-Glu-Ala-His) box polypeptide 30 (predicted) | Symbol and Name status set to approved | 70820 | APPROVED |