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ONTOLOGY REPORT - ANNOTATIONS


Term:DNA geometric change
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Accession:GO:0032392 term browser browse the term
Definition:The process in which a transformation is induced in the geometry of a DNA double helix, resulting in a change in twist, writhe, or both, but with no change in linking number. Includes the unwinding of double-stranded DNA by helicases.
Comment:Note that DNA geometric change and DNA topological change (GO:0006265) are distinct, but are usually coupled in vivo.



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DNA geometric change term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hmgb1 high mobility group box 1 involved_in
acts_upstream_of_or_within
ISS
IDA
GO_REF:0000024
PMID:10962007
AgBase PMID:10962007 GO_REF:0000024, RGD:8554262 NCBI chr12:5,972,950...5,979,658
Ensembl chr12:5,901,586...5,978,565
Ensembl chr16:5,901,586...5,978,565
JBrowse link
G Hmgb1-ps8 high-mobility group box 1, pseudogene 8 involved_in ISS GO_REF:0000024 AgBase GO_REF:0000024 NCBI chr16:34,028,487...34,030,715
Ensembl chr16:34,028,446...34,030,648
JBrowse link
G Mterf1 mitochondrial transcription termination factor 1 involved_in ISO
ISS
(PMID:20550934)
GO_REF:0000024
RGD
UniProt
PMID:20550934 GO_REF:0000024 NCBI chr 4:30,226,345...30,233,402
Ensembl chr 4:30,226,343...30,233,584
JBrowse link
DNA duplex unwinding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Anxa1 annexin A1 involved_in IDA
IEA
GO_REF:0000118 TreeGrafter
RGD
PMID:20655937 GO_REF:0000118, RGD:7421590 NCBI chr 1:217,861,175...217,877,205
Ensembl chr 1:217,861,175...217,877,343
JBrowse link
G Ascc3 activating signal cointegrator 1 complex subunit 3 involved_in ISS
ISO
GO_REF:0000024
(PMID:22055184)
UniProt
RGD
PMID:22055184 GO_REF:0000024 NCBI chr20:53,510,137...53,795,446
Ensembl chr20:53,510,184...53,790,165
JBrowse link
G Blm BLM RecQ like helicase involved_in ISO (PMID:11735402), (PMID:24816114), (PMID:25901030) RGD PMID:11735402 PMID:24816114 PMID:25901030 NCBI chr 1:134,409,832...134,496,073
Ensembl chr 1:134,409,857...134,484,312
JBrowse link
G Brip1 BRCA1 interacting helicase 1 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr10:70,907,266...71,031,502
Ensembl chr10:70,907,371...71,030,324
JBrowse link
G Chd1l chromodomain helicase DNA binding protein 1-like involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 2:185,138,526...185,217,498
Ensembl chr 2:185,139,308...185,217,595
JBrowse link
G Chd8 chromodomain helicase DNA binding protein 8 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr15:24,905,789...24,965,461
Ensembl chr15:24,905,789...24,951,285
JBrowse link
G Chtf18 chromosome transmission fidelity factor 18 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr10:14,743,006...14,751,044
Ensembl chr10:14,742,621...14,751,050
JBrowse link
G Chtf8 chromosome transmission fidelity factor 8 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr19:34,782,005...34,792,306
Ensembl chr19:34,781,856...34,792,578
JBrowse link
G Ddx1 DEAD-box helicase 1 involved_in ISO
ISS
(PMID:18710941)
GO_REF:0000024
RGD
UniProt
PMID:18710941 GO_REF:0000024 NCBI chr 6:35,996,469...36,027,340
Ensembl chr 6:35,996,469...36,027,365
JBrowse link
G Ddx11 DEAD/H-box helicase 11 involved_in ISO
IBA
(PMID:10648783), (PMID:18499658), (PMID:26503245)
GO_REF:0000033
RGD
GO_Central
PMID:10648783 PMID:18499658 PMID:26503245 GO_REF:0000033 NCBI chr 9:105,833,234...105,862,844
Ensembl chr 9:105,833,504...105,862,550
JBrowse link
G Ddx3 DEAD-box helicase 3 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr13:98,520,538...98,523,707
Ensembl chr13:98,520,201...98,524,176
JBrowse link
G Ddx3x DEAD-box helicase 3, X-linked involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr  X:9,479,532...9,493,169
Ensembl chr  X:9,479,532...9,493,168
JBrowse link
G Dhx30 DExH-box helicase 30 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 8:110,064,751...110,096,954
Ensembl chr 8:110,064,752...110,097,381
JBrowse link
G Dhx36 DEAH-box helicase 36 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 2:146,856,469...146,894,577
Ensembl chr 2:146,856,469...146,894,572
JBrowse link
G Dhx9 DExH-box helicase 9 involved_in ISO (PMID:12711669), (PMID:21561811), (PMID:9111062) RGD PMID:9111062 PMID:12711669 PMID:21561811 NCBI chr13:65,602,322...65,639,098
Ensembl chr13:65,602,323...65,639,069
JBrowse link
G Dna2 DNA replication helicase/nuclease 2 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr20:25,661,652...25,690,598
Ensembl chr20:25,662,055...25,716,319
JBrowse link
G Dscc1 DNA replication and sister chromatid cohesion 1 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 7:86,482,588...86,498,212
Ensembl chr 7:86,482,588...86,498,212
JBrowse link
G Dtd1 D-aminoacyl-tRNA deacylase 1 involved_in ISO (PMID:17264083) RGD PMID:17264083 NCBI chr 3:131,995,870...132,158,646
Ensembl chr 3:131,995,861...132,158,659
JBrowse link
G ENSRNOG00000068893 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 Ensembl chr 9:106,007,571...106,018,505 JBrowse link
G ENSRNOG00000071060 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 Ensembl chr 9:106,081,218...106,093,755 JBrowse link
G Ercc2 ERCC excision repair 2, TFIIH core complex helicase subunit involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 1:79,033,342...79,047,102
Ensembl chr 1:79,033,326...79,047,102
JBrowse link
G Ercc3 ERCC excision repair 3, TFIIH core complex helicase subunit involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr18:23,883,613...23,914,326
Ensembl chr18:23,883,580...23,914,329
JBrowse link
G Fancm FA complementation group M involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 6:83,126,903...83,180,455
Ensembl chr 6:83,127,093...83,180,028
JBrowse link
G Fbh1 F-box DNA helicase 1 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr17:66,749,506...66,787,590
Ensembl chr17:66,749,534...66,787,590
JBrowse link
G G3bp1 G3BP stress granule assembly factor 1 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr10:39,586,864...39,620,268
Ensembl chr10:39,586,864...39,620,268
JBrowse link
G Helb DNA helicase B involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000108
(MGI:2152689|PMID:11557815)
GOC
RGD
PMID:11557815 GO_REF:0000108 MGI:2152689 NCBI chr 7:55,588,510...55,615,979
Ensembl chr 7:55,588,798...55,615,585
JBrowse link
G Helq helicase, POLQ-like involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr14:8,818,582...8,862,926
Ensembl chr14:8,818,592...8,862,960
JBrowse link
G Hfm1 helicase for meiosis 1 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr14:2,857,251...2,943,766
Ensembl chr14:2,856,599...2,939,238
JBrowse link
G Ighmbp2 immunoglobulin mu DNA binding protein 2 involved_in ISS
ISO
IEA
GO_REF:0000024
(PMID:19158098), (PMID:30218034)
GO_REF:0000107
UniProt
RGD
Ensembl
PMID:19158098 PMID:30218034 GO_REF:0000024 GO_REF:0000107 NCBI chr 1:200,506,641...200,529,293
Ensembl chr 1:200,506,338...200,529,514
JBrowse link
G Mcm8 minichromosome maintenance 8 homologous recombination repair factor involved_in ISO
IEA
(PMID:26300262)
GO_REF:0000002
RGD
InterPro
PMID:26300262 GO_REF:0000002 NCBI chr 3:120,086,741...120,117,008
Ensembl chr 3:120,086,763...120,117,008
JBrowse link
G Mcm9 minichromosome maintenance 9 homologous recombination repair factor involved_in ISO
IEA
(PMID:26300262)
GO_REF:0000107
RGD
Ensembl
PMID:26300262 GO_REF:0000107 NCBI chr20:32,818,219...32,929,577
Ensembl chr20:32,844,951...32,929,600
JBrowse link
G Mcmdc2 minichromosome maintenance domain containing 2 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 5:9,291,967...9,337,526
Ensembl chr 5:9,298,101...9,338,300
JBrowse link
G Mre11 MRE11 homolog, double strand break repair nuclease involved_in ISO
IEA
(PMID:15790808)
GO_REF:0000107
RGD
Ensembl
PMID:15790808 GO_REF:0000107 NCBI chr 8:11,618,876...11,680,451
Ensembl chr 8:11,632,354...11,678,279
JBrowse link
G Nav2 neuron navigator 2 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 1:98,957,629...99,322,339
Ensembl chr 1:98,663,759...99,322,337
JBrowse link
G Nbn nibrin involved_in ISO
IEA
IBA
(PMID:15790808)
GO_REF:0000118
GO_REF:0000033
GO_REF:0000107
RGD
TreeGrafter
GO_Central
Ensembl
PMID:15790808 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr 5:29,459,574...29,494,152
Ensembl chr 5:29,459,457...29,494,150
JBrowse link
G Pif1 PIF1 5'-to-3' DNA helicase involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 8:66,110,641...66,120,202
Ensembl chr 8:66,111,072...66,120,200
JBrowse link
G Polq DNA polymerase theta involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr11:63,673,796...63,775,905
Ensembl chr11:63,673,816...63,775,878
JBrowse link
G Pot1 protection of telomeres 1 involved_in ISO (PMID:16030011) RGD PMID:16030011 NCBI chr 4:54,205,330...54,263,137
Ensembl chr 4:54,205,332...54,263,042
JBrowse link
G Rad50 RAD50 double strand break repair protein involved_in ISO
IEA
IBA
(PMID:15790808)
GO_REF:0000118
GO_REF:0000033
GO_REF:0000107
RGD
TreeGrafter
GO_Central
Ensembl
PMID:15790808 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr10:37,809,353...37,861,309
Ensembl chr10:37,808,726...37,861,396
JBrowse link
G Recql4 RecQ like helicase 4 involved_in ISO (PMID:19177149) RGD PMID:19177149 NCBI chr 7:108,423,453...108,430,790
Ensembl chr 7:108,423,455...108,430,619
JBrowse link
G Rfc2 replication factor C subunit 2 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr12:22,120,449...22,133,576
Ensembl chr12:22,120,010...22,133,557
JBrowse link
G Rfc3 replication factor C subunit 3 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr12:1,000,987...1,011,778
Ensembl chr12:1,000,994...1,011,778
JBrowse link
G Rfc4 replication factor C subunit 4 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr11:77,749,642...77,764,123
Ensembl chr11:77,749,638...77,764,122
JBrowse link
G Rfc5 replication factor C subunit 5 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr12:39,207,484...39,217,041
Ensembl chr12:39,207,484...39,217,312
JBrowse link
G Rtel1 regulator of telomere elongation helicase 1 involved_in IEA
IBA
ISO
GO_REF:0000108
GO_REF:0000033
(MGI:5522574|PMID:24115439)
GOC
GO_Central
RGD
PMID:24115439 GO_REF:0000033 GO_REF:0000108 MGI:5522574 NCBI chr 3:168,427,247...168,465,349
Ensembl chr 3:168,419,579...168,465,348
JBrowse link
G Ruvbl1 RuvB-like AAA ATPase 1 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 4:120,932,486...120,967,400
Ensembl chr 4:120,932,417...121,029,384
JBrowse link
G Ruvbl1-ps1 RuvB-like AAA ATPase 1, pseudogene 1 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr  X:1,640,138...1,641,886
Ensembl chr  X:1,640,300...1,641,811
JBrowse link
G Ruvbl2 RuvB-like AAA ATPase 2 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 1:95,902,014...95,915,247
Ensembl chr 1:95,901,701...95,915,342
JBrowse link
G Slc25a16 solute carrier family 25 member 16 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr20:25,691,474...25,717,558
Ensembl chr20:25,662,055...25,716,319
JBrowse link
G Sub1 SUB1 regulator of transcription involved_in ISO (PMID:16605275) RGD PMID:16605275 NCBI chr 2:61,005,646...61,020,486
Ensembl chr 2:61,005,666...61,020,436
Ensembl chr 2:61,005,666...61,020,436
JBrowse link
G Supv3l1 Suv3 like RNA helicase involved_in IEA
ISO
ISS
GO_REF:0000107
(PMID:12466530)
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:12466530 GO_REF:0000024 GO_REF:0000107 NCBI chr20:30,378,542...30,399,076
Ensembl chr20:30,378,550...30,399,054
JBrowse link
G Trex1 three prime repair exonuclease 1 acts_upstream_of_or_within ISO (MGI:5637600|PMID:25848017) RGD PMID:25848017 MGI:5637600 NCBI chr 8:109,706,613...109,707,913
Ensembl chr 8:109,706,613...109,708,796
JBrowse link
G Upf1 UPF1, RNA helicase and ATPase involved_in ISO (PMID:30218034) RGD PMID:30218034 NCBI chr16:19,076,594...19,097,365
Ensembl chr16:19,076,322...19,096,568
JBrowse link
G Wrn WRN RecQ like helicase involved_in ISO (PMID:11735402), (PMID:26420422) RGD PMID:11735402 PMID:26420422 NCBI chr16:58,763,517...58,898,604
Ensembl chr16:58,763,504...58,895,450
JBrowse link
G Wrnip1 WRN helicase interacting protein 1 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr17:31,621,410...31,641,659
Ensembl chr17:31,621,411...31,641,659
JBrowse link
G Xrcc5 X-ray repair cross complementing 5 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 9:73,955,216...74,044,020
Ensembl chr 9:73,955,216...74,044,018
JBrowse link
G Xrcc6 X-ray repair cross complementing 6 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 7:113,542,992...113,563,762
Ensembl chr 7:113,543,057...113,563,762
JBrowse link
G Zgrf1 zinc finger, GRF-type containing 1 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 2:216,012,911...216,075,608
Ensembl chr 2:216,013,005...216,074,750
JBrowse link
DNA rewinding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Zranb3 zinc finger RANBP2-type containing 3 involved_in ISO (PMID:21078962), (PMID:22705370) RGD PMID:21078962 PMID:22705370 NCBI chr13:39,440,653...39,595,782
Ensembl chr13:39,440,889...39,595,670
JBrowse link
DNA unwinding involved in DNA replication term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AC129365.1 involved_in IEA GO_REF:0000118 TreeGrafter GO_REF:0000118 Ensembl chr 2:141,551,434...141,554,016 JBrowse link
G Blm BLM RecQ like helicase involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:134,409,832...134,496,073
Ensembl chr 1:134,409,857...134,484,312
JBrowse link
G Cdc45 cell division cycle 45 involved_in ISO (PMID:22474384) RGD PMID:22474384 NCBI chr11:82,185,427...82,210,630
Ensembl chr11:82,185,473...82,210,619
JBrowse link
G Gins1 GINS complex subunit 1 involved_in ISO (PMID:22474384) RGD PMID:22474384 NCBI chr 3:139,724,513...139,745,930
Ensembl chr 3:139,724,490...139,745,936
JBrowse link
G Gins2 GINS complex subunit 2 involved_in ISO (PMID:22474384) RGD PMID:22474384 NCBI chr19:48,626,770...48,639,523
Ensembl chr19:48,626,770...48,639,339
JBrowse link
G Gins3 GINS complex subunit 3 involved_in ISO (PMID:22474384) RGD PMID:22474384 NCBI chr19:9,420,085...9,428,621
Ensembl chr19:9,420,086...9,428,687
JBrowse link
G Gins4 GINS complex subunit 4 involved_in ISO
IEA
(PMID:22474384)
GO_REF:0000107
RGD
Ensembl
PMID:22474384 GO_REF:0000107 NCBI chr16:68,787,572...68,799,938
Ensembl chr16:68,767,339...68,802,273
JBrowse link
G Mcm2 minichromosome maintenance complex component 2 acts_upstream_of_or_within
involved_in
ISO
IBA
(MGI:2156014|PMID:10531422)
GO_REF:0000033
(PMID:22474384)
RGD
GO_Central
PMID:10531422 PMID:22474384 GO_REF:0000033 MGI:2156014 NCBI chr 4:121,346,434...121,360,962
Ensembl chr 4:121,346,434...121,360,847
JBrowse link
G Mcm3 minichromosome maintenance complex component 3 involved_in ISO (PMID:22474384) RGD PMID:22474384 NCBI chr 9:23,219,169...23,237,314
Ensembl chr 9:23,219,169...23,237,314
JBrowse link
G Mcm4 minichromosome maintenance complex component 4 acts_upstream_of_or_within
involved_in
ISO
IBA
PR:P97311|PR:Q61881 (MGI:3582148|PMID:15917436)
GO_REF:0000033
(PMID:22474384)
RGD
GO_Central
PMID:15917436 PMID:22474384 GO_REF:0000033 MGI:3582148 NCBI chr11:85,258,443...85,272,144
Ensembl chr11:85,258,443...85,272,144
JBrowse link
G Mcm5 minichromosome maintenance complex component 5 involved_in ISO (PMID:22474384) RGD PMID:22474384 NCBI chr19:13,483,030...13,504,389
Ensembl chr19:13,483,066...13,504,389
JBrowse link
G Mcm6 minichromosome maintenance complex component 6 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
GO_REF:0000118
(PMID:22474384)
PR:P49717|PR:Q61881 (MGI:3582148|PMID:15917436)
Ensembl
TreeGrafter
RGD
PMID:15917436 PMID:22474384 GO_REF:0000107 GO_REF:0000118 MGI:3582148 NCBI chr13:39,826,745...39,851,937
Ensembl chr13:39,826,763...39,851,960
JBrowse link
G Mcm7 minichromosome maintenance complex component 7 acts_upstream_of_or_within
involved_in
ISO
IBA
PR:P49717|PR:P97311 (MGI:3582148|PMID:15917436)
GO_REF:0000033
(PMID:22474384)
RGD
GO_Central
PMID:15917436 PMID:22474384 GO_REF:0000033 MGI:3582148 NCBI chr12:17,042,207...17,049,470
Ensembl chr12:17,042,212...17,050,063
JBrowse link
G Pura purine rich element binding protein A involved_in ISO (PMID:15777841) RGD PMID:15777841 NCBI chr18:27,885,071...27,905,509
Ensembl chr18:27,884,556...27,905,513
JBrowse link
G Rad51 RAD51 recombinase involved_in ISO (PMID:7988572) RGD PMID:7988572 NCBI chr 3:106,099,753...106,125,038
Ensembl chr 3:106,100,381...106,125,035
JBrowse link
G Recql RecQ like helicase involved_in IEA
IBA
GO_REF:0000118
GO_REF:0000033
TreeGrafter
GO_Central
GO_REF:0000033 GO_REF:0000118 NCBI chr 4:175,308,337...175,332,965
Ensembl chr 4:175,304,117...175,332,945
JBrowse link
G Recql4 RecQ like helicase 4 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 7:108,423,453...108,430,790
Ensembl chr 7:108,423,455...108,430,619
JBrowse link
G Recql5 RecQ like helicase 5 involved_in IEA
IBA
GO_REF:0000118
GO_REF:0000033
TreeGrafter
GO_Central
GO_REF:0000033 GO_REF:0000118 NCBI chr10:101,126,544...101,165,739
Ensembl chr10:101,126,547...101,165,652
JBrowse link
G Ssbp1 single stranded DNA binding protein 1 involved_in ISO
IEA
(PMID:26446790)
GO_REF:0000107
RGD
Ensembl
PMID:26446790 GO_REF:0000107 NCBI chr 4:69,266,024...69,276,135
Ensembl chr 4:69,266,102...69,276,135
JBrowse link
G Twnk twinkle mtDNA helicase involved_in
acts_upstream_of_or_within
ISO (PMID:15167897)
(MGI:2136707|PMID:11431692)
RGD PMID:11431692 PMID:15167897 MGI:2136707 NCBI chr 1:243,867,568...243,874,802
Ensembl chr 1:243,868,330...243,874,802
JBrowse link
G Wrn WRN RecQ like helicase involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr16:58,763,517...58,898,604
Ensembl chr16:58,763,504...58,895,450
JBrowse link
G-quadruplex DNA unwinding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Blm BLM RecQ like helicase involved_in ISO
IBA
(PMID:11735402)
GO_REF:0000033
UniProtKB:O09053 (MGI:5700122|PMID:26195664)
RGD
GO_Central
PMID:11735402 PMID:26195664 GO_REF:0000033 MGI:5700122 NCBI chr 1:134,409,832...134,496,073
Ensembl chr 1:134,409,857...134,484,312
JBrowse link
G Ddx11 DEAD/H-box helicase 11 involved_in ISO (PMID:26503245) RGD PMID:26503245 NCBI chr 9:105,833,234...105,862,844
Ensembl chr 9:105,833,504...105,862,550
JBrowse link
G Dhx36 DEAH-box helicase 36 involved_in ISO
ISS
(PMID:16150737), (PMID:18842585)
(MGI:6201778|PMID:25611385)
GO_REF:0000024
RGD
UniProt
PMID:16150737 PMID:18842585 PMID:25611385 GO_REF:0000024 MGI:6201778 NCBI chr 2:146,856,469...146,894,577
Ensembl chr 2:146,856,469...146,894,572
JBrowse link
G Dhx9 DExH-box helicase 9 involved_in ISO (PMID:21561811) RGD PMID:21561811 NCBI chr13:65,602,322...65,639,098
Ensembl chr13:65,602,323...65,639,069
JBrowse link
G Hnrnpa2b1 heterogeneous nuclear ribonucleoprotein A2/B1 involved_in IDA PMID:23184978 BHF-UCL PMID:23184978 RGD:11567256 NCBI chr 4:80,534,659...80,545,297
Ensembl chr 4:80,534,651...80,545,249
JBrowse link
G Wrn WRN RecQ like helicase involved_in ISO
IBA
(PMID:11735402)
GO_REF:0000033
UniProtKB:O88700 (MGI:5700122|PMID:26195664)
RGD
GO_Central
PMID:11735402 PMID:26195664 GO_REF:0000033 MGI:5700122 NCBI chr16:58,763,517...58,898,604
Ensembl chr16:58,763,504...58,895,450
JBrowse link
negative regulation of DNA duplex unwinding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Sub1 SUB1 regulator of transcription involved_in ISO (PMID:16605275) RGD PMID:16605275 NCBI chr 2:61,005,646...61,020,486
Ensembl chr 2:61,005,666...61,020,436
Ensembl chr 2:61,005,666...61,020,436
JBrowse link
G Top2a DNA topoisomerase II alpha involved_in ISO
ISS
IEA
(PMID:12711669)
GO_REF:0000024
GO_REF:0000107
RGD
UniProt
Ensembl
PMID:12711669 GO_REF:0000024 GO_REF:0000107 NCBI chr10:83,945,731...83,976,874
Ensembl chr10:83,945,735...83,976,874
JBrowse link
nucleotide-excision repair, DNA duplex unwinding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ercc3 ERCC excision repair 3, TFIIH core complex helicase subunit involved_in ISO (PMID:17466626) RGD PMID:17466626 NCBI chr18:23,883,613...23,914,326
Ensembl chr18:23,883,580...23,914,329
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20350
    cellular process 18813
      cellular component organization or biogenesis 7188
        cellular component organization 6877
          organelle organization 3818
            chromosome organization 580
              DNA conformation change 92
                DNA geometric change 82
                  DNA duplex unwinding + 77
                  DNA rewinding 1
                  G-quadruplex DNA unwinding + 6
paths to the root