Gene: Xpa (XPA, DNA damage recognition and repair factor) Rattus norvegicus
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Symbol: Xpa
Name: XPA, DNA damage recognition and repair factor
Description: ENCODES a protein that exhibits damaged DNA binding (ortholog); protein domain specific binding (ortholog); protein homodimerization activity (ortholog); INVOLVED IN response to auditory stimulus; DNA repair (ortholog); intrinsic apoptotic signaling pathway in response to DNA damage (ortholog); PARTICIPATES IN altered nucleotide excision repair pathway; nucleotide excision repair pathway; ASSOCIATED WITH asphyxiating thoracic dystrophy (ortholog); asphyxiating thoracic dystrophy 3 (ortholog); basal cell carcinoma (ortholog); FOUND IN cytoplasm; nucleus; DNA replication factor A complex (ortholog); INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; 2,6-dinitrotoluene; benzo[a]pyrene
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: DNA repair protein complementing XP-A cells; LOC298074; xeroderma pigmentosum, complementation group A
Orthologs:
Homo sapiens (human) : XPA (XPA, DNA damage recognition and repair factor)  HGNC  Alliance
Mus musculus (house mouse) : Xpa (xeroderma pigmentosum, complementation group A)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Xpa (XPA, DNA damage recognition and repair factor)
Pan paniscus (bonobo/pygmy chimpanzee) : XPA (XPA, DNA damage recognition and repair factor)
Canis lupus familiaris (dog) : XPA (XPA, DNA damage recognition and repair factor)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Xpa (XPA, DNA damage recognition and repair factor)
Sus scrofa (pig) : XPA (XPA, DNA damage recognition and repair factor)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0561,749,767 - 61,793,641 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.0566,266,229 - 66,310,103 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4562,706,719 - 62,750,771 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.1562,726,371 - 62,750,949 (-)NCBI
Celera558,992,396 - 59,036,208 (-)NCBICelera
Cytogenetic Map5q22NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
References - curated
References - uncurated
RGD Disease Portals

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 5.0)

Additional Information

External Database Links
Nomenclature History
 
More on Xpa
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1308769
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2019-01-30
Status: ACTIVE