Glom12 QTL Report (Rattus norvegicus) - Rat Genome Database

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QTL: Glom12 (Glomerulus QTL 12) Rattus norvegicus

Symbol: Glom12
Name: Glomerulus QTL 12
RGD ID: 1598807
Also known as: GIS-m4
Trait: kidney glomerulus morphology trait   (VT:0005325)    
Measurement Type: index of glomerular damage   (CMO:0001135)    
LOD Score: 2.7
P Value: Not Available
Variance: Not Available
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2533,215,665 - 78,215,665RGD_MAPPER_PIPELINEmRatBN7.2
Rnor_6.0534,402,409 - 79,402,409RGD_MAPPER_PIPELINERnor6.0
Rnor_5.0538,938,687 - 83,938,687RGDRnor5.0
RGSC_v3.4535,474,610 - 80,474,610RGDRGSC3.4
RGSC_v3.1535,474,789 - 80,474,789RGD
Cross Type: intercross
Strains Crossed: SR/JrHsd SS/JrHsd 
JBrowse: View Region in Genome Browser (JBrowse)
Model



Disease Annotations     Click to see Annotation Detail View

Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype
Experimental Data Annotations     Click to see Annotation Detail View

Clinical Measurement

Experimental Condition

Vertebrate Trait

Rat Strain
SR/JrHsd  (IEA)
SS/JrHsd  (IEA)

References

References - curated
1. Herrera VL, etal., Physiol Genomics. 2006 Aug 16;26(3):172-9. Epub 2006 May 23.

Region

Genes in Region
The following Genes overlap with this region.    Full Report CSV TAB Printer Analysis Tools
RGD IDSymbolNameChrStartStopSpecies
68428Aqp3aquaporin 3 (Gill blood group)55623920056244718Rat
3852Tgfbr1transforming growth factor, beta receptor 156165377361710777Rat
67390Orm1orosomucoid 157676663776776149Rat
61882Nr4a3nuclear receptor subfamily 4, group A, member 356236158862401489Rat
61900Gabrr1gamma-aminobutyric acid type A receptor subunit rho 154752415147561228Rat
2090Aldobaldolase, fructose-bisphosphate B56388904563902086Rat
61946Pou3f2POU class 3 homeobox 253607793036083838Rat
70919Cltaclathrin, light chain A55824425358263480Rat
2102Ambpalpha-1-microglobulin/bikunin precursor57656809476578416Rat
2190Baatbile acid CoA:amino acid N-acyltransferase56385166863860641Rat
2083Aladaminolevulinate dehydratase57596199375972334Rat
620059Slc31a1solute carrier family 31 member 157581474475844241Rat
62005Tmeff1transmembrane protein with EGF-like and two follistatin-like domains 156291074062996494Rat
2682Gghgamma-glutamyl hydrolase53352988033552790Rat
2380Coq3coenzyme Q3 methyltransferase53542956735460613Rat
3874Tmod1tropomodulin 156031644560393957Rat
62059Tesk1testis associated actin remodelling kinase 155769192257697698Rat
3211Muskmuscle associated receptor tyrosine kinase57305842773169696Rat
621671Ptbp3polypyrimidine tract binding protein 357431353674399439Rat
621445Klf4Kruppel like factor 457027884370283751Rat
631330Whrnwhirlin57682830876911945Rat
631344Abca1ATP binding cassette subfamily A member 156767826767801162Rat
2369Cnr1cannabinoid receptor 154840854348436099Rat
621856Rnf38ring finger protein 3855835877158467424Rat
621704Grin3aglutamate ionotropic receptor NMDA type subunit 3A56400684764206408Rat
621569Hemgnhemogen56067963360698597Rat
621285Anp32bacidic nuclear phosphoprotein 32 family member B56074307760765726Rat
621332Il11ra1interleukin 11 receptor subunit alpha 155693182456941408Rat
708499Stx17syntaxin 1756244613862506108Rat
708508Obp3alpha-2u globulin PGCL457484231674845858Rat
620694Smu1SMU1, DNA replication regulator and spliceosomal factor55585669155875262Rat
70905Ccnccyclin C53526682835284943Rat
620072Elp1elongator acetyltransferase complex subunit 157145333871505833Rat
621870UgcgUDP-glucose ceramide glucosyltransferase57403297874065701Rat
620563Lpar1lysophosphatidic acid receptor 157322904773347874Rat
621595Vcpvalosin-containing protein55721016757229571Rat
628735Tnfsf15TNF superfamily member 1557714009977156142Rat
620942Dnaja1DnaJ heat shock protein family (Hsp40) member A155584241455853326Rat
621723Foxe1forkhead box E156063002760632835Rat
628740Aptxaprataxin55579889655822963Rat
621157Txn1thioredoxin 157271233472724564Rat
68364Sigmar1sigma non-opioid intracellular receptor 155690415556907012Rat
727958Zfp483zinc finger protein 48357376320173780511Rat
620436Cgaglycoprotein hormones, alpha polypeptide54948691549499192Rat
628753Pnrc1proline-rich nuclear receptor coactivator 154764707047657832Rat
621426Slc44a1solute carrier family 44 member 156806194168241912Rat
621195Ptgr1prostaglandin reductase 157378400073802624Rat
620327Maneamannosidase, endo-alpha54019637340218534Rat
1303188Spink4serine peptidase inhibitor, Kazal type 455605310456065029Rat
1307056Fhl5four and a half LIM domains 553890794138956759Rat
1305807RGD1305807hypothetical LOC29807756010694960147546Rat
621514Gng10G protein subunit gamma 1057385612473863017Rat
619864Gabbr2gamma-aminobutyric acid type B receptor subunit 256094751761288104Rat
619724Tdrd7tudor domain containing 756023874260312548Rat
735162Ndufaf4NADH:ubiquinone oxidoreductase complex assembly factor 453860516938610341Rat
621057Tnctenascin C57737585177460712Rat
3915Ttpaalpha tocopherol transfer protein53349753733518936Rat
708501LOC259244alpha-2u globulin PGCL357490946874912890Rat
1304816Fkbp15FKBP prolyl isomerase family member 1557575078675815038Rat
619723Unc13bunc-13 homolog B55728899957504110Rat
3334Anks6ankyrin repeat and sterile alpha motif domain containing 656130918361350596Rat
1304595Tmem268transmembrane protein 26857697482777001457Rat
2019Aco1aconitase 155525984155315872Rat
620723Zfp37zinc finger protein 3757559873275638896Rat
735211Mup4major urinary protein 457496114374964686Rat
708400BspryB-box and SPRY domain containing57592739775949585Rat
2145Aqp7aquaporin 755617164956186642Rat
70957Epha7Eph receptor A754297535343128703Rat
620851Npr2natriuretic peptide receptor 255788317157901590Rat
619955Fut9fucosyltransferase 953935181539565256Rat
1304730Dcaf10DDB1 and CUL4 associated factor 1055960779559647209Rat
1304739Exosc3exosome component 355957384959579065Rat
69239Gneglucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase55826718958307396Rat
69232Ppp3r2protein phosphatase 3, regulatory subunit B, beta56402690364027898Rat
1304660Ccl27C-C motif chemokine ligand 2755694140256948511Rat
735107Mup5major urinary protein 557520132475204903Rat
735115Col27a1collagen type XXVII alpha 1 chain57664730276765987Rat
1305203Bag1BAG cochaperone 155606849456081075Rat
61931Zfp292zinc finger protein 29254938417749468177Rat
1304693Mms22lMMS22-like, DNA repair protein53819770738313745Rat
1304697Actl7aactin-like 7a57144744771450440Rat
1306394Mdn1midasin AAA ATPase 154705543547190426Rat
1304997Sec61bSEC61 translocon subunit beta56177359461781804Rat
1307079Spag8sperm associated antigen 855790168157903894Rat
1306737Aldh1b1aldehyde dehydrogenase 1 family, member B156006337060068378Rat
620900B4galt1beta-1,4-galactosyltransferase 155593561455982461Rat
1305135Akap2A-kinase anchoring protein 257253698672648524Rat
1305703Tmem38btransmembrane protein 38B56846030468496026Rat
1306900Atp6v0d2ATPase H+ transporting V0 subunit D253333625733385354Rat
1305655Actl7bactin-like 7b57144553271446920Rat
1305656Igfbpl1insulin-like growth factor binding protein-like 156007642860091833Rat
1305067Ube2j1ubiquitin-conjugating enzyme E2, J154742251347441476Rat
1306426Ca9carbonic anhydrase 955776323457769838Rat
1307453Dnajb5DnaJ heat shock protein family (Hsp40) member B555717684057185492Rat
1309940Alg2ALG2, alpha-1,3/1,6-mannosyltransferase56176873861773297Rat
1307963Slc31a2solute carrier family 31 member 257573800875748542Rat
1305186Ubap1ubiquitin-associated protein 155652072256561153Rat
1307983InipINTS3 and NABP interacting protein57464839274662628Rat
1309978Frrs1lferric-chelate reductase 1-like57165591171690132Rat
1305190Mcart1mitochondrial carrier triple repeat 155965022759663454Rat
3566Rgs3regulator of G-protein signaling 357602203876161895Rat
1305724Fbxl4F-box and leucine-rich repeat protein 453595580136029446Rat
1307723Kif24kinesin family member 2455656101956628040Rat
1307367Zbtb5zinc finger and BTB domain containing 555924413259265461Rat
1307395PnisrPNN interacting serine and arginine rich protein53539596535422852Rat
1306460Gpr63G protein-coupled receptor 6353867254838727224Rat
1310007RragdRas-related GTP binding D54737390247409369Rat
1310012Tmem8btransmembrane protein 8B55791947357948419Rat
1308769XpaXPA, DNA damage recognition and repair factor56043167360476438Rat
1305387Hsdl2hydroxysteroid dehydrogenase like 257444393374479104Rat
1305158Smim8small integral membrane protein 854933661749345625Rat
1307791Akirin2akirin 254910823149122566Rat
1303116Plppr1phospholipid phosphatase related 156343745763725286Rat
1303121Txndc8thioredoxin domain containing 857274972572785858Rat
1305419Rars2arginyl-tRNA synthetase 2, mitochondrial54918151749238664Rat
1305420TrmotRNA methyltransferase O56066310660676423Rat
1306576Rpp25lribonuclease P/MRP subunit p25 like55687842056879956Rat
1305598Gba2glucosylceramidase beta 255782238957834522Rat
1307218Pgap4post-GPI attachment to proteins GalNAc transferase 456393191663947004Rat
1333374Olr840olfactory receptor 84055808115058082109Rat
1333398Olr851olfactory receptor 85156751869167519650Rat
1309438Map3k7mitogen activated protein kinase kinase kinase 754635697346415597Rat
1310893Tstd2thiosulfate sulfurtransferase like domain containing 256037175160415916Rat
1309719Coro2acoronin 2A56082563060881917Rat
1310395Cavin4caveolae associated protein 456299697563004819Rat
1333384Olr848olfactory receptor 84856740215767403110Rat
1308033Nol6nucleolar protein 655625991956270540Rat
1309547Dctn3dynactin subunit 355688108556889041Rat
1359369Ccincalicin55820667658208563Rat
1310364Klhl32kelch-like family member 3253832123738568453Rat
1333133Olr844olfactory receptor 84456730562067306573Rat
1311717Ubap2ubiquitin-associated protein 255634824356437403Rat
1310467Zcchc7zinc finger CCHC-type containing 755899255859173308Rat
1332684Olr833olfactory receptor 83355795197157952921Rat
1310820Col15a1collagen type XV alpha 1 chain56150196361607591Rat
1332606Olr836olfactory receptor 83655801960658020565Rat
1332612Olr850olfactory receptor 85056745575167456701Rat
1310425Fam221bfamily with sequence similarity 221, member B55791034657919562Rat
1311249Fam214bfamily with sequence similarity 214, member B55726083957274524Rat
1311354Ndufb6NADH:ubiquinone oxidoreductase subunit B655540054355410110Rat
1311359Slc35a1solute carrier family 35 member A154922559949248405Rat
1311363Ptpn3protein tyrosine phosphatase, non-receptor type 357190852072027323Rat
1311367Snx30sorting nexin family member 3057468390274813013Rat
1309757Cd72Cd72 molecule55769736157704980Rat
1312045Tex10testis expressed 1056276223062808373Rat
1310951RGD1310951similar to RIKEN cDNA E130308A1957449177774636170Rat
1311303Prpf4pre-mRNA processing factor 457585993475873924Rat
1310336Ccl19C-C motif chemokine ligand 1955696336456965308Rat
1333321Olr847olfactory receptor 84756727844467279397Rat
1310773Lingo2leucine rich repeat and Ig domain containing 255037074451687252Rat
1311996Ccl21C-C motif chemokine ligand 2155698055756981661Rat
1310743Zfp618zinc finger protein 61857639851476564837Rat
1311434Ctnnal1catenin alpha-like 157151434071569431Rat
1311342Cdc26cell division cycle 2657584485275859837Rat
1309045Ifnkinterferon kappa54973207349734281Rat
1333279Olr843-psolfactory receptor pseudogene 84356726430467264919Rat
1332747Olr839olfactory receptor 83955806707858068034Rat
1332764Olr841olfactory receptor 84156722777467228733Rat
1311633Slc7a13solute carrier family 7 member 1353327741633298105Rat
1310976Usp45ubiquitin specific peptidase 4553531862135392090Rat
1560696Mob3bMOB kinase activator 3B54954180449737934Rat
1310641Cfap206cilia and flagella associated protein 20654925439949299145Rat
1309460Ddx58DEXD/H-box helicase 5855532122955369947Rat
1306510Zfp189zinc finger protein 18956387259663884348Rat
1306860Tbc1d2TBC1 domain family, member 256088411460931717Rat
1305227Smc2structural maintenance of chromosomes 256680688266853478Rat
1305229Frmpd1FERM and PDZ domain containing 155944307659545125Rat
1311514Trim14tripartite motif-containing 1456080003260825481Rat
1311410RngttRNA guanylyltransferase and 5'-phosphatase54770692947913297Rat
1308008Mrpl50mitochondrial ribosomal protein L5056386743763872591Rat
1309367Wdr31WD repeat domain 3157589707475917461Rat
1306483Galtgalactose-1-phosphate uridylyltransferase55692703956930284Rat
1309291RGD1309291similar to RIKEN cDNA 4930547C1056699808367000642Rat
1309308Ufl1Ufm1-specific ligase 153896272138995134Rat
1308487Kif12kinesin family member 1257659620476603261Rat
1310087Fktnfukutin56833980368396412Rat
1310088Atp6v1g1ATPase H+ transporting V1 subunit G157696146276967642Rat
1309498Pigophosphatidylinositol glycan anchor biosynthesis, class O55724472157256252Rat
1306247Tln1talin 155778767057817900Rat
1308974Melkmaternal embryonic leucine zipper kinase55854039358600937Rat
1306966Susd1sushi domain containing 157415765374281171Rat
1305968Chmp5charged multivesicular body protein 555608138556098529Rat
1308202AknaAT-hook transcription factor57677741576824380Rat
1308165Msantd3Myb/SANT DNA binding domain containing 356286602262892444Rat
1309176Erp44endoplasmic reticulum protein 4456251655062610762Rat
1309821Myorgmyogenesis regulating glycosidase55665425756664467Rat
1309630Gja10gap junction protein, alpha 1054699496447002902Rat
1307853Pm20d2peptidase M20 domain containing 254756605947586334Rat
1305465Fbxo10F-box protein 1055929701659343429Rat
1305771Casp8ap2caspase 8 associated protein 254701450147052276Rat
1308845Reckreversion-inducing-cysteine-rich protein with kazal motifs55810291558169513Rat
1308851Grhprglyoxylate and hydroxypyruvate reductase55923417959243614Rat
1308285Stoml2stomatin like 255725622757259824Rat
1310277Nfx1nuclear transcription factor, X-box binding 155610494556162912Rat
1311757Rgp1RGP1 homolog, RAB6A GEF complex partner 155783446757843087Rat
1308457Orc3origin recognition complex, subunit 354912375849181552Rat
1305270ToporsTOP1 binding arginine/serine rich protein, E3 ubiquitin ligase55538803355399937Rat
1308958Tmem245transmembrane protein 24557157095271647915Rat
1308910Hint2histidine triad nucleotide binding protein 255790461357906868Rat
1308973Ncbp1nuclear cap binding protein subunit 156041602360449004Rat
1306148EcpasEcm29 proteasome adaptor and scaffold57360174573714026Rat
1306195RGD1306195similar to RAN protein55445600554457381Rat
1308831Creb3cAMP responsive element binding protein 355781783557823171Rat
1310376Arhgef39Rho guanine nucleotide exchange factor 3955775250957756079Rat
1559864Phf24PHD finger protein 2455714342857171054Rat
1562865Bach2BTB domain and CNC homolog 254663233846982676Rat
1561387Fam205cfamily with sequence similarity 205, member C55708730557093191Rat
1562449Faxcfailed axon connections homolog, metaxin like GST domain containing53548013735539741Rat
1560284Spaca1sperm acrosome associated 154852540648540676Rat
1562958Rad23bRAD23 homolog B, nucleotide excision repair protein57009023270128340Rat
1359688Nipsnap3bnipsnap homolog 3B56763764467669698Rat
1561488Dnajc25DnaJ heat shock protein family (Hsp40) member C2557382556573847878Rat
1561162Srsf12serine and arginine rich splicing factor 1254760652647631509Rat
1565671Dnai1dynein, axonemal, intermediate chain 155673017956800926Rat
1562988Epb41l4berythrocyte membrane protein band 4.1 like 4B57169170671852039Rat
1565773Polr1eRNA polymerase I subunit E55927945659295346Rat
1560252Ccdc107coiled-coil domain containing 10755774950257752920Rat
1559919Sit1signaling threshold regulating transmembrane adaptor 155774021257741838Rat
1563359Invsinversin56261091662763813Rat
1561916RGD1561916similar to testes development-related NYD-SP22 isoform 155666616056678799Rat
1310485Slc46a2solute carrier family 46, member 257480022674808128Rat
1562001Galnt12polypeptide N-acetylgalactosaminyltransferase 1256138457561413346Rat
1334264Olr837olfactory receptor 83755803253558033482Rat
1311936Rnf20ring finger protein 2056397606364001754Rat
1359108RGD1359108similar to RIKEN cDNA 3110043O2154976634049791434Rat
1562265RGD1562265similar to ribosomal protein S1254361254543612943Rat
1333470Olr835-psolfactory receptor pseudogene 83555801380858014421Rat
1560943Arid3cAT-rich interaction domain 3C55689004256895888Rat
1334138Olr853olfactory receptor 85356758930667590244Rat
1562123Zfp462zinc finger protein 46256967008569810729Rat
1334076Olr838olfactory receptor 83855804633058047286Rat
1303100Cntfrciliary neurotrophic factor receptor55682344856861075Rat
1559479Tpm2tropomyosin 255777091957780278Rat
1310735Trmt10btRNA methyltransferase 10B55954884559572529Rat
1332920Olr854olfactory receptor 85457358268673583627Rat
1359532Acnat2acyl-coenzyme A amino acid N-acyltransferase 256375326963757521Rat
1563056RGD1563056similar to hypothetical protein54931678449329164Rat
1333724Olr834olfactory receptor 83455796139157962329Rat
1311943NansN-acetylneuraminate synthase56078044160797583Rat
1333551Olr852olfactory receptor 85256755571867556668Rat
1332933Olr845olfactory receptor 84556733715267340910Rat
1334211Olr846-psolfactory receptor pseudogene 84656733739567338021Rat
1562259RGD1562259similar to 40S ribosomal protein S2055786762857868145Rat
1303023Nudt2nudix hydrolase 255662826556643104Rat
1565350ShbSH2 domain containing adaptor protein B55967806659785443Rat
1585791LOC680998hypothetical protein LOC68099856372743963729005Rat
1586081LOC366349similar to 60S ribosomal protein L23a54950771649508319Rat
1586082LOC366345similar to BCL2/adenovirus E1B 19kDa-interacting protein 1, NIP2 isoform beta54827942748281466Rat
1585101LOC691313similar to Caspase-3 precursor (CASP-3) (Apopain) (Cysteine protease CPP32) (Yama protein) (CPP-32) (SREBP cleavage activity 1) (SCA-1) (LICE) (IRP)53455824334559081Rat
1585262Hdhd3haloacid dehalogenase-like hydrolase domain containing 357595130875954775Rat
1359475Pole3DNA polymerase epsilon 3, accessory subunit57597394175977175Rat
1566134RGD1566134similar to alpha-2u-globulin57520132475224797Rat
1583727LOC500473similar to alpha-2u globulin PGCL257498681374990071Rat
1583730LOC500460similar to olfactory receptor Olr84156724174967242708Rat
1583731Ankrd6ankyrin repeat domain 654719798147343183Rat
1586696Hspd1-ps10heat shock protein 1, pseudogene 1057372826073730198Rat
1584099LOC688867similar to cisplatin resistance-associated overexpressed protein54965348749655419Rat
1584073Tex48testis expressed 4857701716277033720Rat
1584718LOC681025hypothetical protein LOC68102556376466663786264Rat
1586646Shoc1shortage in chiasmata 157386442373956487Rat
1583669Glipr2GLI pathogenesis-related 255817041758200947Rat
1563572Tstd3thiosulfate sulfurtransferase like domain containing 353529465235304101Rat
1586797Capns1-ps1calpain, small subunit 1, pseudogene 155029456450297529Rat
1586399LOC689901similar to TGF beta-inducible nuclear protein 153789234137897149Rat
1587377LOC298615hypothetical pseudogene on chromosome 5q2356660632766608257Rat
1583223Nipsnap3anipsnap homolog 3A (C. elegans)56761399367625067Rat
1564956RGD1564956similar to calcium binding protein P2256857089468571875Rat
1564809Fsd1lfibronectin type III and SPRY domain containing 1-like56825887768334931Rat
1563460LOC500475similar to hypothetical protein 4933430I1757597729676002179Rat
1564412Rnf183ring finger protein 18357587711175886253Rat
1562799Cylc2cylicin 256555432065576251Rat
1584966LOC313182similar to SEC24 related gene family, member C57139498671407245Rat
1561252RGD1561252similar to Ubiquitin carboxyl-terminal hydrolase isozyme L3 (Ubiquitin thiolesterase L3)57603749876038593Rat
1565236Pax5paired box 555876333458945719Rat
1594316LOC678911similar to 40S ribosomal protein S656668085366681691Rat
1586079LOC366365hypothetical LOC36636555960217759607812Rat
1586080LOC366355similar to L-lactate dehydrogenase A chain (LDH-A) (LDH muscle subunit) (LDH-M)55313501053136103Rat
1586075Cct6a-ps4chaperonin containing Tcp1, subunit 6A (zeta 1), pseudogene 457373065473732638Rat
1586077LOC366369similar to K+ channel tetramerization protein56651324066514662Rat
1588668Fam219afamily with sequence similarity 219, member A55667927256729959Rat
1586184LOC298727similar to Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)57709206177094437Rat
1592281LOC689481similar to ribosomal protein S1255696719256987008Rat
1592194LOC690770similar to heterogeneous nuclear ribonucleoprotein K55181298851817585Rat
1591027LOC690801similar to heat shock protein 855316325753165307Rat
1588799LOC688489similar to alpha2u globulin57505917075061471Rat
1587477FancgFA complementation group G55723028757240067Rat
1584701Acnat1acyl-coenzyme A amino acid N-acyltransferase 156379665163801601Rat
1589037LOC685849hypothetical protein LOC68584957266057372669438Rat
1589861Tmem215transmembrane protein 21555561256855615828Rat
1590403Tnfsf8TNF superfamily member 857725388177277078Rat
1589883Prdm13PR/SET domain 1353522081535233641Rat
1584846LOC502949similar to Sorbitol dehydrogenase (L-iditol 2-dehydrogenase)56054795960551393Rat
1589795LOC690990similar to 60S ribosomal protein L23a55651206356512765Rat
1590957LOC690877hypothetical protein LOC69087755545244255453652Rat
1589840LOC690941similar to ribosomal protein L2455578299955783468Rat
1589948LOC689630hypothetical protein LOC68963053510828035108914Rat
1584049LOC690119similar to ADP-ribosylation factor-like protein 654284114642841746Rat
1585166LOC690046hypothetical protein LOC69004654026254740295229Rat
1587460Atp8b5pATPase, class I, type 8B, member 5, pseudogene55750589757620065Rat
61902Gabrr2gamma-aminobutyric acid type A receptor subunit rho 254744528047489929Rat
1592688Rusc2RUN and SH3 domain containing 255762839757675524Rat
1596535LOC683961similar to ribosomal protein S1355645712156457669Rat
1594560Abitramactin binding transcription modulator57150585371524224Rat
1594562LOC298010similar to Carnitine acetyltransferase56952910069531269Rat
1593270LOC298117similar to Tubulin alpha-6 chain (Alpha-tubulin 6)57767917177681447Rat
1593272LOC298111alpha2u globulin57531171375316792Rat
1594034Dcaf12DDB1 and CUL4 associated factor 1255646041856482171Rat
1588987Svep1sushi, von Willebrand factor type A, EGF and pentraxin domain containing 157281120072988813Rat
1596808Tomm5translocase of outer mitochondrial membrane 555936236059365217Rat
1594826Ube2r2ubiquitin-conjugating enzyme E2R 255628660456345160Rat
1595137LOC685311similar to Histidine triad nucleotide-binding protein 1 (Adenosine 5-monophosphoramidase) (Protein kinase C inhibitor 1) (Protein kinase C-interacting protein 1) (PKCI-1)56863483968635405Rat
1591051Nkain3Sodium/potassium transporting ATPase interacting 353361372034310090Rat
1597334Lyrm2LYR motif containing 254719819247200470Rat
1596467Tal2TAL bHLH transcription factor 256841101268417569Rat
1597991LOC681281similar to Superoxide dismutase [Mn], mitochondrial precursor56625852666259065Rat
1598042LOC681229similar to family with sequence similarity 51, member A1 homolog56573527265735956Rat
1594682LOC690581similar to chondroitin sulfate GalNAcT-254892507248927897Rat
1597744LOC685138similar to ribosomal protein S2356800625968006756Rat
1594697LOC690563similar to SET translocation54889456548895728Rat
2301013Sec61glSEC61 gamma subunit-like55558521355585625Rat
2318060Fam166bfamily with sequence similarity 166, member B55767553757680133Rat
2320086LOC100361479hypothetical LOC10036147957439202074393768Rat
2320512LOC100361251developmental pluripotency-associated protein 3-like56136001661360478Rat
2322103LOC100360453chromobox homolog 3-like56828055868281429Rat
2321337LOC100360821rCG55159-like55719993157203964Rat
2323040LOC100363405hypothetical LOC10036340557493033574960075Rat
2323083LOC100359962mitochondrial malate dehydrogenase-like55067273950676819Rat
2323128LOC100359916heterogeneous nuclear ribonucleoprotein K-like55866832658670222Rat
2322518LOC100360232hypothetical LOC10036023254222778342228049Rat
2321090LOC100360970glutathione peroxidase 856984410869844745Rat
2323278Hrct1histidine rich carboxyl terminus 155798240957983186Rat
2322670LOC100360179zinc finger, FYVE domain containing 20-like55279522552797778Rat
2320471Fam205afamily with sequence similarity 205, member A55706573957071880Rat
2323431LOC100363209brain expressed X-linked 2-like57350552773505906Rat
2324327LOC100362631PEST proteolytic signal containing nuclear protein-like53584625835848205Rat
2324520LOC100362534K(lysine) acetyltransferase 2B-like53542640735428184Rat
2324538LOC100362516Obg-like ATPase 156660184566602611Rat
2325356Mir873microRNA 87355135691951356995Rat
2325370Mir207microRNA 20755584280655842883Rat
2325412Mir876microRNA 87655133719151337269Rat
2325417Mir455microRNA 45557668931376689390Rat
2325586Mir32microRNA 3257159608371596152Rat
2324157LOC100362701rCG31968-like56937553669376103Rat
6489783LOC100911942zinc finger protein 37-like57504402175200228Rat
6487582Enhoenergy homeostasis associated55680098056802777Rat
6487777LOC100912327olfactory receptor 13C3-like56737248967373466Rat
6492721LOC100911464glutathione S-transferase P-like53858666738592201Rat
6490958LOC10091177140S ribosomal protein S6-like54031268240313404Rat
6495515LOC100910962zinc finger protein 37-like57530189275311574Rat
6495713LOC10091099440S ribosomal protein S18-like53514547535145950Rat
6499311LOC10091031540S ribosomal protein S12-like55832439458325731Rat
6499463LOC100910222ubiquitin-40S ribosomal protein S27a-like54891664348917100Rat
6497336Palm2paralemmin 257231364672450645Rat
6500827LOC10091001760S ribosomal protein L31-like57598578575986272Rat
6497715LOC100910620uncharacterized LOC10091062057209458272101070Rat
6497914LOC100910535prefoldin subunit 6-like56071755360717974Rat
6498132Ccdc180coiled-coil domain containing 18056015488360223508Rat
7523626LOC102556461uncharacterized LOC10255646157272487472742702Rat
7525226LOC102547886placenta-expressed transcript 1 protein-like56847472768477394Rat
7504318LOC102555886ribonuclease P protein subunit p38-like54744411947445294Rat
7529433LOC102551074uncharacterized LOC10255107457407691374089728Rat
7499527LOC102551410uncharacterized LOC10255141056802042068030171Rat
7530658LOC102549334uncharacterized LOC10254933454369784143757417Rat
7513176LOC102553820uncharacterized LOC10255382053608558836089407Rat
7534874LOC102547534uncharacterized LOC10254753457591749175921199Rat
7516529LOC102551558exosome complex component RRP43-like56249637662498494Rat
7520008LOC102551110uncharacterized LOC10255111054661950146637446Rat
7540511LOC102550849uncharacterized LOC10255084957395654973963604Rat
7649691LOC102556095uncharacterized LOC10255609557210349272111379Rat
7651324LOC102555980uncharacterized LOC10255598054749277147502403Rat
7641478LOC10254923060S ribosomal protein L10a-like54973891149739989Rat
7657583LOC102549876uncharacterized LOC10254987654958355049587920Rat
7643335LOC102553326uncharacterized LOC10255332657084070370847771Rat
7555191LOC102551474uncharacterized LOC10255147456811484168145983Rat
7589034LOC102553455uncharacterized LOC10255345557141076071414956Rat
7573312LOC102557269uncharacterized LOC10255726954979119149864621Rat
7573721Smim27small integral membrane protein 2755539869655400308Rat
7550670LOC102550203zinc finger protein 120-like57309120573091526Rat
7551556LOC102553821uncharacterized LOC10255382155667907056684701Rat
7695413LOC102547858uncharacterized LOC10254785857680748576814704Rat
7706450LOC102551711uncharacterized LOC10255171156269760362753262Rat
7708637LOC102546532uncharacterized LOC10254653257281555872823891Rat
7685874LOC102556038uncharacterized LOC10255603857205669372060103Rat
7712908LOC102546330uncharacterized LOC10254633056304368963061249Rat
7697789LOC102553131uncharacterized LOC10255313157700793877011175Rat
7670634LOC102547621uncharacterized LOC10254762155695297756960366Rat
7721743LOC102551073uncharacterized LOC10255107356148938761502617Rat
7682781LOC102553640zinc finger protein 37-like57497845374985589Rat
9082336LOC103692331uncharacterized LOC10369233154845049948520234Rat
9267319LOC103695253uncharacterized LOC10369525357514215675145524Rat
9225019LOC10369524660S ribosomal protein L39-like53864218238642839Rat
9234855LOC103692377uncharacterized LOC10369237757750867977564182Rat
9283972LOC103692326uncharacterized LOC10369232654599237845995040Rat
9246609LOC103692348uncharacterized LOC10369234855991124059915448Rat
9297465LOC103692338putative thymosin beta-4-like protein 655731945957319811Rat
9340681LOC103692353uncharacterized LOC10369235356784980867858913Rat
9330186LOC10369234660S ribosomal protein L24 pseudogene55937347759374019Rat
9434881LOC103692341gamma-glutamylaminecyclotransferase-like54734324847355132Rat
9435428LOC103692329eukaryotic initiation factor 4A-I pseudogene54775341147754665Rat
9444073LOC103692317histone deacetylase 1 pseudogene53406494734076063Rat
9453420LOC103692336uncharacterized LOC10369233655680576556817066Rat
9455316LOC103690179phosphoglycerate mutase 1-like55959321759593995Rat
11464753LOC108351128uncharacterized LOC10835112857278598072792102Rat
11466141LOC108350963uncharacterized LOC10835096356086071560864473Rat
11360528LOC108350948uncharacterized LOC10835094854769506447706817Rat
11457499LOC108351089heterogeneous nuclear ribonucleoprotein A1-like55365434253655308Rat
11436894LOC108350951uncharacterized LOC10835095154906192649094913Rat
11365609LOC108350978uncharacterized LOC10835097857195962271960619Rat
11357613LOC108350962uncharacterized LOC10835096256088192860890626Rat
11371333LOC108350984U6 snRNA-associated Sm-like protein LSm6 pseudogene57714581477155846Rat
11439912LOC108350950uncharacterized LOC10835095054827279048371017Rat
11452394LOC108350953small ubiquitin-related modifier 2 pseudogene54948279049483777Rat
11415834LOC108350970uncharacterized LOC10835097056484877564970925Rat
11398296LOC108350949uncharacterized LOC10835094954783364147845926Rat
11388087LOC108350944uncharacterized LOC10835094454631252546332473Rat
11389431LOC108350947uncharacterized LOC10835094754741423947422384Rat
11400923LOC108351093H/ACA ribonucleoprotein complex subunit 3 pseudogene57693498976936468Rat
11403548LOC108348231major urinary protein-like57546285575498898Rat
11404702LOC108351088uncharacterized LOC10835108855421856054219234Rat
11476908LOC108350959uncharacterized LOC10835095955833701058350402Rat
11480254LOC108351124uncharacterized LOC10835112454378010443783053Rat
11505979LOC108350952uncharacterized LOC10835095254906238049063472Rat
11499882LOC108350968uncharacterized LOC10835096856288035062910661Rat
11514913LOC108350981uncharacterized LOC10835098157567230775691604Rat
41248950LOC120103343small nucleolar RNA SNORA1756865391268654044Rat
41282557LOC120103300U2 spliceosomal RNA57384285573843025Rat
41322375LOC120102845uncharacterized LOC12010284553609136236095251Rat
41356641LOC120102866uncharacterized LOC12010286656025729860267598Rat
41380328LOC120103148uncharacterized LOC12010314855939229559395154Rat
41380609LOC120103072zinc finger protein 37-like57548850175532807Rat
41205132LOC120102883uncharacterized LOC12010288357210115572115231Rat
41324074LOC120102896uncharacterized LOC12010289657618489376187189Rat
41324317NEWGENE_40934091transfer RNA alanine (anticodon AGC)57473727474737355Rat
41358655LOC12010305760S ribosomal protein L6-like54259253142593424Rat
41206721LOC120103331small nucleolar RNA SNORA1757782081177820944Rat
41206741LOC120102863uncharacterized LOC12010286355921362759226603Rat
41253762LOC120103313small nucleolar RNA SNORA1756854841868548540Rat
41286228LOC120102873uncharacterized LOC12010287356219883162234609Rat
41286760LOC120102893major urinary protein-like57557956475581856Rat
41327246LOC120103060uncharacterized LOC12010306055628697356300346Rat
41386911LOC120103361U2 spliceosomal RNA57030731870307431Rat
41092501LOC120102859putative 60S ribosomal protein L39-like 555731859057318749Rat
41145764LOC120103388U6 spliceosomal RNA54068212540682231Rat
41209452NEWGENE_40933693transfer RNA proline (anticodon GGG)57558855575588628Rat
41259190LOC12010287860S ribosomal protein L36a-like56795430567958398Rat
41361886LOC120102877uncharacterized LOC12010287756719190567195516Rat
41261574LOC120103353small nucleolar RNA SNORD7557448345274483511Rat
41329014LOC120103196U6 spliceosomal RNA56712440067124500Rat
41362570LOC120102887zinc finger protein 37-like57521304975221201Rat
41363728LOC120102865uncharacterized LOC12010286556021582360222294Rat
41389895LOC120103067tubulin alpha-1A chain-like55290789152911653Rat
41149442LOC120102848uncharacterized LOC12010284854604083146066269Rat
41262738LOC120103208U6 spliceosomal RNA54304813943048245Rat
41330287LOC120103245U7 small nuclear RNA55508991255089976Rat
41122038LOC120102869uncharacterized LOC12010286956090395160904907Rat
41190661NEWGENE_40938314transfer RNA serine (anticodon AGA)57467176274671843Rat
41212488LOC120103151uncharacterized LOC12010315156914468869153641Rat
41367081LOC120103256small nucleolar RNA SNORD113/SNORD114 family56369844663698522Rat
41122460LOC120102870uncharacterized LOC12010287056155012661567214Rat
41122531LOC120102880uncharacterized LOC12010288056949405369506142Rat
41192036LOC120103344U2 spliceosomal RNA54842749848427636Rat
41394701LOC120102847uncharacterized LOC12010284754485879044922780Rat
41124713LOC120103308small nucleolar RNA SNORA1756223163762231768Rat
41124986LOC120103374U4 spliceosomal RNA53356421533564342Rat
41155819LOC120103062uncharacterized LOC12010306257103473071037178Rat
41193020LOC120103357small nucleolar RNA SNORD121A55636700956367089Rat
41215818LOC120103303small nucleolar RNA SNORA1756943219369432324Rat
41344927LOC120103149proteasome subunit beta type-3-like56213299462133594Rat
41369930LOC120103070zinc finger protein 37-like57486333974895596Rat
41102148LOC120103204U6 spliceosomal RNA57704088277040985Rat
41157556LOC120103071major urinary protein-like57528152075283268Rat
41194781LOC120103371U4 spliceosomal RNA54974815649748295Rat
41194899LOC120103068SUMO-conjugating enzyme UBC9-like55567970855692106Rat
41217704LOC120103339small nucleolar RNA SNORA1756324864463248766Rat
41069886LOC120103194U6 spliceosomal RNA54755397647554081Rat
41102833LOC120103292small nucleolar RNA SNORA4853517650435176637Rat
41128100LOC120103150olfactory receptor 13C3-like56742361867424571Rat
41270715LOC120103066putative E3 ubiquitin-protein ligase UBR754951026449512757Rat
41373051LOC120102855uncharacterized LOC12010285555536968155370818Rat
41185977LOC120102856uncharacterized LOC12010285655551486355520852Rat
41271580LOC120103296small nucleolar RNA SNORA1754935856049358689Rat
41374908Spaarsmall regulatory polypeptide of amino acid response55798556957991972Rat
41162930LOC120103359small nucleolar RNA SNORD121A55635624356356319Rat
41162947LOC12010314540S ribosomal protein S20-like53880265738803367Rat
41272850LOC120102857uncharacterized LOC12010285755694557756952969Rat
41272998LOC120103341small nucleolar RNA SNORA1756602623666026348Rat
41294123LOC120102854uncharacterized LOC12010285455214079152143955Rat
41294829LOC120103330small nucleolar RNA SNORA1754253603042536158Rat
41352216LOC120102849uncharacterized LOC12010284954659689946619460Rat
41132309LOC120102885uncharacterized LOC12010288557456447374568006Rat
41164079LOC120102860uncharacterized LOC12010286055753872457568537Rat
41352849LOC120103380U6 spliceosomal RNA55798503557985141Rat
41377042LOC120103354U6atac minor spliceosomal RNA56760131267601439Rat
41404093LOC120103153uncharacterized LOC12010315357349116173494563Rat
41084988LOC120102871uncharacterized LOC12010287156172824561741721Rat
41108935LOC120103243U7 small nuclear RNA57448812374488181Rat
41133959LOC120103304small nucleolar RNA SNORA1753928202539282156Rat
41200968LOC120102864uncharacterized LOC12010286455947188159475003Rat
40946078LOC120103154uncharacterized LOC12010315457816128078184113Rat
40972487NEWGENE_40940579transfer RNA leucine (anticodon AAG)56986995869870038Rat
40948141LOC120103234U6 spliceosomal RNA57250483872504938Rat
41340812LOC120103315small nucleolar RNA SNORA1755864448858644614Rat
40976841NEWGENE_40933816transfer RNA valine (anticodon AAC)54908089349080965Rat
40926645LOC120103314small nucleolar RNA SNORA1756688363866883766Rat
40980160LOC120102881uncharacterized LOC12010288157009059670103137Rat
40980997LOC120102858uncharacterized LOC12010285855740698657422319Rat
40999109LOC120102891major urinary protein-like57539412375397484Rat
40929885LOC12010306340S ribosomal protein SA-like57112474671125687Rat
41002171NEWGENE_40934091transfer RNA alanine (anticodon AGC)56368361763683691Rat
40932422LOC120102872uncharacterized LOC12010287256195026661963787Rat
40933017LOC120103152cytochrome c oxidase subunit 6B1-like56964624769646803Rat
40960952LOC120102882uncharacterized LOC12010288257046003770477599Rat
40985493LOC120103329small nucleolar RNA SNORA1753599237635992505Rat
41006368LOC120103311U2 spliceosomal RNA54123388541233967Rat
41007842LOC120103346small nucleolar RNA SNORA1755737819257378303Rat
40962879LOC12010306940S ribosomal protein S18-like57028434770316393Rat
40987917LOC120102894uncharacterized LOC12010289457597160175972858Rat
41009651LOC120103073uncharacterized LOC12010307357565420575664531Rat
40940830LOC120103220U6 spliceosomal RNA55618933456189452Rat
40965561LOC120103061uncharacterized LOC12010306155648534456491627Rat
40992078LOC120102874uncharacterized LOC12010287456223105162234747Rat
40994216LOC120102890major urinary protein-like57542016175422438Rat
40969773LOC120103351small nucleolar RNA SNORA2653828552538285644Rat
41074835LOC120103248U7 small nuclear RNA53878275638782820Rat
41243557LOC120103056wee1-like protein kinase 253555171635553140Rat
41075750LOC120103316small nucleolar RNA SNORA1753460649634606629Rat
41076057LOC120103294small nucleolar RNA SNORA1754810633948106470Rat
41076485LOC120102886uncharacterized LOC12010288657451184374515127Rat
41313046LOC120103226U6 spliceosomal RNA54858804548588141Rat
41025292LOC120102908SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-like57218614672200555Rat
41078263LOC120103367small nucleolar RNA U354937190549372024Rat
41246143LOC120103221U6 spliceosomal RNA55554495855545064Rat
41316018LOC120103215U6 spliceosomal RNA55046074850460853Rat
41028138LOC120103269small nucleolar RNA SNORA557113206671132150Rat
41052311LOC120102876eukaryotic translation initiation factor 2 subunit 1-like56403946064051932Rat
41030381LOC120102868uncharacterized LOC12010286856069396560699404Rat
41134945LOC120102842uncharacterized LOC12010284253526381335266767Rat
41248460LOC120102853uncharacterized LOC12010285354837353548403687Rat
41255465LOC120102895uncharacterized LOC12010289557616671976167330Rat
41256844LOC120102846uncharacterized LOC12010284654308424543103773Rat
41144673LOC120102862uncharacterized LOC12010286255889677158899409Rat
41151486LOC120103355U2 spliceosomal RNA54409051344090680Rat
41257904LOC120103382U6 spliceosomal RNA55460119254601298Rat
41335677LOC120103222U6 spliceosomal RNA53903012139030224Rat
41336381LOC120102879uncharacterized LOC12010287956802166368030631Rat
41317448LOC120103335small nucleolar RNA SNORA1753887785038877982Rat
41222628LOC120102844uncharacterized LOC12010284453583956535843140Rat
41225041LOC120102888major urinary protein-like57546285575472666Rat
41225436LOC120102889major urinary protein-like57491752475569763Rat
41225607LOC120102892major urinary protein-like57501439375016663Rat
41301366LOC120102867uncharacterized LOC12010286756029682160318015Rat
41302148LOC120103147uncharacterized LOC12010314755865494358659293Rat
41302224LOC120102850uncharacterized LOC12010285054693292946937124Rat
41334998LOC120102884NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5-like57365922373659587Rat
41038197LOC120103299small nucleolar RNA SNORA1757020966370209794Rat
41227498LOC120103358small nucleolar RNA SNORD121A55636927856369356Rat
41303713LOC120103338small nucleolar RNA SNORA1756469761764697721Rat
41016461LOC120102852uncharacterized LOC12010285254746852847472049Rat
41305661LOC120102841uncharacterized LOC12010284153514989835192551Rat
41041337LOC120102875uncharacterized LOC12010287556308423563097575Rat
41237335LOC120103146uncharacterized LOC12010314654643085646432860Rat
41044339LOC120102851uncharacterized LOC12010285154699298847009537Rat
41021982LOC12010284360S ribosomal protein L30-like53538183235382175Rat
41309963LOC120103301small nucleolar RNA SNORA1757030955770309688Rat
41023182LOC120103265small nucleolar RNA SNORA6857437920274379330Rat

Markers in Region
The following Markers overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolExpected SizeChrStartStopSpeciesMatch
10931D5Wox1322657516579275166041Ratregion
33836D5Mit912756029343460293557Ratregion
33921D5Mit219456928513369285327Ratregion
34047D5Mit113655596227855962414Ratregion
34057D5Mit1713557196353371963668Ratregion
34144D5Mgh1114657425132074251464Ratregion
34212D5Mgh518154372665643726832Ratregion
34216D5Mgh614456898430768984447Ratregion
34322D5Mgh1014155979339959793528Ratregion
34501D5Mgh2614855580560655805750Ratregion
33678D5Mit1010055571562255715708Ratregion
36113D5Rat116353473011634730278Ratregion
36177D5Rat913555882923658829371Ratregion
36279D5Rat415254786906247869213Ratregion
37440D5Rat8412956954029569540447Ratregion
36946D5Rat717655571562655715787Ratregion
37684D5Rat7620056558701265587212Ratregion
37992D5Rat10223855686914956869389Ratregion
36482D5Rat1215256785677667856928Ratregion
36618D5Rat216853793984237939998Ratregion
36689D5Rat1414157599664575996794Ratregion
36743D5Rat1115356281175862811911Ratregion
34837D5Rat5217454784548347845673Ratregion
34953D5Rat1515257710834477108498Ratregion
35042D5Rat817655866567858665852Ratregion
35076D5Rat614855045536850455513Ratregion
35144D5Rat1316857338076273380925Ratregion
35767D5Rat515854983094949831125Ratregion
35783D5Rat1014356151004461510180Ratregion
39644D5Rat14420057454650474546700Ratregion
39722D5Rat13423055032855150328767Ratregion
39738D5Rat18219057196353271963722Ratregion
40430D5Rat19417556222253762222721Ratregion
38548D5Rat8224054404503444045280Ratregion
38740D5Rat11321057348379673483994Ratregion
38746D5Rat11719655327483853275044Ratregion
38768D5Rat10014856617408066174226Ratregion
40272D5Rat13815956213209362132240Ratregion
40280D5Rat13616055873725558737417Ratregion
39150D5Rat10420056925722469257424Ratregion
39186D5Rat7024953518915335189418Ratregion
39252D5Rat7523457405864074058878Ratregion
39344D5Rat14323757480875974809008Ratregion
39402D5Rat13924656856377068564008Ratregion
42314D5Rat25023853370151833701740Ratregion
42315D5Rat25120453675380236754006Ratregion
42316D5Rat25320154492654444926750Ratregion
42317D5Rat25220154406941944069621Ratregion
42318D5Rat25414354959378349593924Ratregion
42737D5Rat19122553556320335563429Ratregion
42738D5Rat22020253348711933487295Ratregion
42744D5Rat22523756291968262919913Ratregion
42745D5Rat22723256151334261513580Ratregion
42747D5Rat22822257136600871366215Ratregion
42748D5Rat22921357413420674134408Ratregion
41206D5Rat14614957733153277331679Ratregion
41250D5Rat14028556416859964168813Ratregion
41250D5Rat14028556416853864168813Ratregion
41314D5Rat14116156807141868071553Ratregion
41350D5Rat13215254012830740128459Ratregion
40790D5Rat13720956303981863040023Ratregion
41072D5Rat13320354779785647798053Ratregion
41104D5Rat13521655668076356680977Ratregion
41800D5Rat19514756260545262605589Ratregion
43232D1Got6813855274058152742270Ratregion
43730D3Got12414957127070771270856Ratregion
43891D6Got3620253566775035667952Ratregion
43895D5Got618556776813267768317Ratregion
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5071000RH13482818754641526446415453Ratregion
5071174RH13493020655915753359157739Ratregion
5071174RH13493020655915753359157739Ratregion
5074414RH13800318953953867939538868Ratregion
5071260RH13498020556250304762503252Ratregion
5071420RH13507220657756384877564054Ratregion
5073618RH13754014457263701472637158Ratregion
5073768RH13762714956065544060655589Ratregion
5073780RH13763414755665597756656124Ratregion
5072164RH13669016255664290356643064Ratregion
5072246RH13673817157463759774637768Ratregion
5072368RH13680924857444309374443341Ratregion
5072474RH13687020757659625476596461Ratregion
5074756RH13820020453746788837468092Ratregion
5071584RH13516620855585290955853117Ratregion
5061808AW52710522257250504872505273Ratregion
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5067476AU04772126154463578244636035Ratregion
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5067516AU04769714554674493246745077Ratregion
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5062700BF40388321256852725768527469Ratregion
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5062750AW53422717156066312660663297Ratregion
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5065810BE10991415155561525355615404Ratregion
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5060320AW53137820457460790074608104Ratregion
5061862AI70995017657158036171580537Ratregion
5061976BF39703319156399519963995507Ratregion
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5060456BE09813420755784428857844496Ratregion
5064002AA95600113857145552471455662Ratregion
5060776BF38911915956975430369754462Ratregion
5060924BI28698021255715539657155608Ratregion
5064248BE12087118554683645146836636Ratregion
5064292AW52991615456393812663938280Ratregion
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5066094BE11680915257667077276670924Ratregion
5061094AW53223218255953275559532937Ratregion
5064470BF39928715756367816863678325Ratregion
5064612BF39943716153537196735372128Ratregion
5066236PMC123076P145754842940548429862Ratregion
5061274BE11142016353650291136503074Ratregion
5063022BI30115316054697698646977146Ratregion
5064654BI30249517557274248072742655Ratregion
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5066408AU04837415856037196760372125Ratregion
5061464BE10523919954965420449654403Ratregion
5063210BI30142517453520216435202338Ratregion
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5084230AA84882920856767853367678741Ratregion
5086042BE10377819056833001168330201Ratregion
5087086AA92446017356249813262498305Ratregion
5087100AW52324025356017250760172760Ratregion
5087354AI55527118557191136771911552Ratregion
5087500PMC20962P120756063021460630421Ratregion
5086481BM38649018157379969073799871Ratregion
5086551BM38581316357141457671414739Ratregion
5086604BF28494415555664290956643064Ratregion
5087743Cnr118354842993348430116Ratregion
5089805AU04937413555554634255546477Ratregion
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5087484PMC207565P114156780109567801236Ratregion
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5085369BQ20134119357272625972726452Ratregion
5090299AU04966822456758368467583908Ratregion
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5081156RH14199721953747585437476073Ratregion
5081276RH14206719756088413760884334Ratregion
5085421AI59878717357338110573381278Ratregion
5085728BQ20195021455964340359643617Ratregion
5085774BQ21140718657152808271528268Ratregion
5090297AU04966725254694954246949794Ratregion
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5089217AU04902527156127103261271303Ratregion
5081408AI50195418057145638471456564Ratregion
5082477BI27480918754892811148928298Ratregion
5082477BI27480918754892811148928298Ratregion
5086012BM38381020556037835660378561Ratregion
5081290RH14207520655957228159572487Ratregion
5084832AI17218917756849559968495779Ratregion
5083073BF39075615157376644173766592Ratregion
5083079BF39077616756240251162402678Ratregion
5081551BE11731217255794817557948347Ratregion
5081577BE11747320554718805047188255Ratregion
5085677AW52687012257656466676564788Ratregion
5085701BM39079018253930125339301435Ratregion
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5086813BE10736515557463759674637751Ratregion
5081711BF40846912457415792374158047Ratregion
5081767BE11811517054721382147213995Ratregion
5081903BE11871916956299916362999332Ratregion
5081911BE11874016155782107357821234Ratregion
5085958AI13709622056819073868190956Ratregion
5083757AI00976812657574935875749484Ratregion
5083867AI23085120257416374974163951Ratregion
5503156TESK1-138655769541657696422Ratregion
5503542PALM2__581972157244883172449552Ratregion
5503542PALM2__581972157244868372449552Ratregion
5503813CDW92_935072456819137468192098Ratregion
5503954Klf455257028191770283119Ratregion
5504222RH7997520756819085068191057Ratregion
5504873ha284791354211235542113268Ratregion
5505052Kat2b6853542712335427190Ratregion
5505134Ambp9857657284776573596Ratregion
5505251Ccl21a34055698069256981115Ratregion
5505568UniSTS:482606142254842873348430155Ratregion
5505352Atp6v1g114857696543276966960Ratregion
5505748UniSTS:492577144853608237636083824Ratregion
5505762UniSTS:492614130557144559671446901Ratregion
5506000UniSTS:496823055682913256829498Ratregion
5506007UniSTS:49727763854284112642841764Ratregion
5506240Sctt01136857463264374633011Ratregion
5507101UniSTS:22453919754310892343109120Ratregion
5500174D4Mit22945056147419161474641Ratregion
5500280D2S213811556194776161947876Ratregion
5499827UniSTS:23489145754912034149120798Ratregion
5499831UniSTS:23489626154938794649388207Ratregion
5499833UniSTS:23491823756068225960682496Ratregion
5500250AW5533769955692976356930133Ratregion
5500352GDB:28063017556006636660066541Ratregion
5503017Fut941653936313039363546Ratregion
5500475Aqp3055624008156241431Ratregion
5500699RH7967727955826316458263443Ratregion
5500729D19S40990457379811873799022Ratregion
5503490ZNF618__471460257655853076559132Ratregion
5500947MARC_9753-9754:996688568:167756039741860398095Ratregion
5500961MARC_9998-9999:997196716:1128255780827057809552Ratregion
5500997PMC114562P433155781802457818440Ratregion
5501061PMC133552P235456236923462369588Ratregion
5501434Sod224156625852166258762Ratregion
5501470D9S187E7156973380869733879Ratregion
5501576RH7492923355826320158263434Ratregion
5501722UniSTS:26699014254312507543125217Ratregion
5501838MARC_15327-15328:1017321397:179856399472063995518Ratregion
5501906MARC_17336-17337:1021394418:110955749883257499457Ratregion
5501964MARC_21252-21253:1032892750:126457178090071781164Ratregion
5502241AF0049278955690449356904582Ratregion
6904163D5Uwm7730057752186077522160Ratregion
6904165D5Uwm7826357754076277541025Ratregion
6904167D5Uwm7924757758593877586187Ratregion
6904169D5Uwm8028357763271877633001Ratregion
6904171D5Uwm8127457771465477714928Ratregion
6904173D5Uwm8227457774323977743513Ratregion
6904175D5Uwm8329057778640477786694Ratregion
6904177D5Uwm8427657779124077791352Ratregion
6904177D5Uwm8427657779107677791604Ratregion
6904177D5Uwm8427657779107677791352Ratregion
6904179D5Uwm8525457781615577816409Ratregion
6904181D5Uwm8629357781954877819841Ratregion
6904181D5Uwm8629357781946577819841Ratregion
6904183D5Uwm8721157796053577960746Ratregion
6904185D5Uwm8825657798860477988860Ratregion
6904187D5Uwm8922057799815177998371Ratregion
6904189D5Uwm9021957800587678006099Ratregion
6904191D5Uwm9121557801870678018921Ratregion
6904193D5Uwm9224257803884078039084Ratregion
6904195D5Uwm9317857810195878102136Ratregion
6904197D5Uwm9414657819183078191978Ratregion
Position Markers

Peak: (D5Mit10)
Rat AssemblyChrPosition (strand)Source
mRatBN7.2555,715,622 - 55,715,708 (+)MAPPER
Rnor_6.0556,902,367 - 56,902,452NCBI
Rnor_5.0561,438,645 - 61,438,730UniSTS
RGSC_v3.4557,974,567 - 57,974,653RGD
RGSC_v3.4557,974,568 - 57,974,653UniSTS
RGSC_v3.1557,974,747 - 57,974,832RGD
Celera554,328,778 - 54,328,863UniSTS
RH 3.4 Map5271.12UniSTS
RH 3.4 Map5271.12RGD
RH 2.0 Map5337.6RGD
SHRSP x BN Map536.2599RGD
Cytogenetic Map5 RGD


QTLs in Region (mRatBN7.2)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1331756Rf34Renal function QTL 344.16275kidney blood vessel physiology trait (VT:0100012)absolute change in renal blood flow rate (CMO:0001168)5190450412Rat
70212Niddm25Non-insulin dependent diabetes mellitus QTL 253.54blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)51131345958Rat
1331771Rf35Renal function QTL 354.36965kidney blood vessel physiology trait (VT:0100012)absolute change in renal blood flow rate (CMO:0001168)572947086724018Rat
1576314Eutr1Estrogen induced uterine response QTL 1uterus integrity trait (VT:0010575)pyometritis severity score (CMO:0002009)52138965166875058Rat
8662454Vetf3Vascular elastic tissue fragility QTL 327.4artery integrity trait (VT:0010639)number of ruptures of the internal elastic lamina of the abdominal aorta and iliac arteries (CMO:0002562)5228222669540447Rat
1300117Hrtrt8Heart rate QTL 83.49heart pumping trait (VT:2000009)heart rate (CMO:0000002)5384401847869213Rat
61462Niddm10Non-insulin dependent diabetes mellitus QTL 103.90.001blood glucose amount (VT:0000188)plasma glucose level (CMO:0000042)5511215947171491Rat
2293666Bmd38Bone mineral density QTL 384.4femur size trait (VT:1000369)femoral neck cortical cross-sectional area (CMO:0001702)5894822853948228Rat
7394712Emca13Estrogen-induced mammary cancer QTL 13mammary gland integrity trait (VT:0010552)mammary tumor number (CMO:0000343)5982326699753708Rat
1641903Alcrsp3Alcohol response QTL 3response to alcohol trait (VT:0010489)duration of loss of righting reflex (CMO:0002289)51268928557689285Rat
634305Mamtr1Mammary tumor resistance QTL 10.0001mammary gland integrity trait (VT:0010552)mammary tumor number (CMO:0000343)512789751113558310Rat
1600358Mamtr5Mammary tumor resistance QTL 5mammary gland integrity trait (VT:0010552)mammary tumor number (CMO:0000343)51887394763873947Rat
1358353Srcrtb2Stress Responsive Cort Basal QTL 23.480.003blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)51887394774251464Rat
8552954Pigfal14Plasma insulin-like growth factor 1 level QTL 149blood insulin-like growth factor amount (VT:0010479)plasma insulin-like growth factor 1 level (CMO:0001299)52122674466226744Rat
1549901Neudeg2Neurodegradation QTL 240nervous system integrity trait (VT:0010566)mononuclear cell count (CMO:0002119)52483871044045280Rat
1578767Stresp17Stress response QTL 174.30.01blood aldosterone amount (VT:0005346)plasma aldosterone level (CMO:0000551)52795544072955440Rat
1578776Stresp18Stress response QTL 182.9thymus mass (VT:0004954)thymus wet weight (CMO:0000855)52795544072955440Rat
6903292Stl28Serum triglyceride level QTL 282.60.0073blood triglyceride amount (VT:0002644)plasma triglyceride level (CMO:0000548)52851548973515489Rat
6903306Scl35Serum cholesterol QTL 352.60.0073blood cholesterol amount (VT:0000180)plasma total cholesterol level (CMO:0000585)52851548973515489Rat
2290448Scl54Serum cholesterol level QTL 542.93blood cholesterol amount (VT:0000180)plasma total cholesterol level (CMO:0000585)531663789131345958Rat
1598807Glom12Glomerulus QTL 122.7kidney glomerulus morphology trait (VT:0005325)index of glomerular damage (CMO:0001135)53321566578215665Rat
1298067Scl15Serum cholesterol level QTL 154.80.001blood cholesterol amount (VT:0000180)plasma total cholesterol level (CMO:0000585)53321566578215665Rat
1302786Kidm8Kidney mass QTL 828.15kidney mass (VT:0002707)both kidneys wet weight to body weight ratio (CMO:0000340)53321566578215665Rat
1576317Eutr2Estrogen induced uterine response QTL 20.01uterus integrity trait (VT:0010575)pyometritis severity score (CMO:0002009)534730116104251008Rat
2316959Gluco59Glucose level QTL 594.7blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)534944474113558310Rat
1641922Alcrsp8Alcohol response QTL 8alcohol metabolism trait (VT:0015089)blood ethanol level (CMO:0000535)53518915368564008Rat
1641912Alcrsp18Alcohol response QTL 18response to alcohol trait (VT:0010489)duration of loss of righting reflex (CMO:0002289)535189153141643988Rat
1549845Scl44Serum cholesterol level QTL 446blood cholesterol amount (VT:0000180)serum total cholesterol level (CMO:0000363)540128307148607290Rat
1331773Scl26Serum cholesterol level QTL 263.065blood cholesterol amount (VT:0000180)serum total cholesterol level (CMO:0000363)54372665686724018Rat
1331801Rf33Renal function QTL 334.149kidney blood vessel physiology trait (VT:0100012)absolute change in renal vascular resistance (CMO:0001900)543726656129132602Rat
1578766Tcas11Tongue tumor susceptibility QTL 114.12tongue integrity trait (VT:0010553)number of squamous cell tumors of the tongue with diameter greater than 3 mm (CMO:0001950)546711509161317411Rat
1300115Hrtrt7Heart rate QTL 72.76heart pumping trait (VT:2000009)heart rate (CMO:0000002)54786906290099692Rat
9589025Epfw7Epididymal fat weight QTL 720.660.001epididymal fat pad mass (VT:0010421)epididymal fat pad weight to body weight ratio (CMO:0000658)54946360094463600Rat
7411561Bw134Body weight QTL 134240.001body mass (VT:0001259)body weight gain (CMO:0000420)54946360094463600Rat
1576312Emca8Estrogen-induced mammary cancer QTL 84.1mammary gland integrity trait (VT:0010552)mammary tumor number (CMO:0000343)550328551141643988Rat
2303615Vencon7Ventilatory control QTL 70.001respiration trait (VT:0001943)respiration rate (CMO:0000289)55098389595983895Rat
2303574Gluco42Glucose level QTL 422blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)55349671998496719Rat
61359EaexExperimental allergic encephalomyelitis QTL x3nervous system integrity trait (VT:0010566)post-insult time to onset of experimental autoimmune encephalomyelitis (CMO:0001422)555715622100715622Rat
70189Mcs5Mammary carcinoma susceptibility QTL 510.51mammary gland integrity trait (VT:0010552)mammary tumor number (CMO:0000343)555805606132207589Rat
1358895Bp254Blood pressure QTL 2543.60.0003arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)558829236128034027Rat
1598868Mcs12Mammary carcinoma susceptibility QTL 120.0001mammary gland integrity trait (VT:0010552)mammary tumor number (CMO:0000343)55897344960051321Rat
61426Scl2Serum cholesterol level QTL 27.30.001blood cholesterol amount (VT:0000180)serum total cholesterol level (CMO:0000363)559793399143070159Rat
2316954Rf57Renal function QTL 570kidney glomerulus morphology trait (VT:0005325)index of glomerular damage (CMO:0001135)55979352890450144Rat
2316957Pur21Proteinuria QTL 216.2urine protein amount (VT:0005160)urine protein level (CMO:0000591)559793528113558156Rat
61386Bp49Blood pressure QTL 4916.6cerebrum integrity trait (VT:0010549)brain infarction volume (CMO:0001013)56029343498603051Rat
61393Bp7Blood pressure QTL 74.50.0001arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)560293434161481680Rat
1598814Mcs13Mammary carcinoma susceptibility QTL 130.0001mammary gland integrity trait (VT:0010552)mammary tumor number (CMO:0000343)56319089069927503Rat
2290005Mcs24Mammary carcinoma susceptibility QTL 24mammary gland integrity trait (VT:0010552)mammary tumor number (CMO:0000343)564719390109719390Rat
2306971Anxrr21Anxiety related response QTL 219.47fear/anxiety-related behavior trait (VT:1000241)number of entries into a discrete space in an experimental apparatus (CMO:0000960)566174080124160948Rat
2312671Scl64Serum cholesterol level QTL 640.001blood cholesterol amount (VT:0000180)serum total cholesterol level (CMO:0000363)568984307104251008Rat
61380Edpm5Estrogen-dependent pituitary mass QTL 54.50.92pituitary gland mass (VT:0010496)pituitary gland wet weight (CMO:0000853)568984307104251008Rat
1357396Bw44Body weight QTL 444.19body mass (VT:0001259)body weight (CMO:0000012)568984307104251008Rat
1357402Bw46Body weight QTL 464.47body mass (VT:0001259)body mass index (BMI) (CMO:0000105)568984307104251008Rat
2302381Bw84Body weight QTL 844.47body mass (VT:0001259)body mass index (BMI) (CMO:0000105)568984307104251008Rat
1354598Srn6Serum renin concentration QTL 63.8blood renin amount (VT:0003349)plasma renin activity level (CMO:0000116)569540295151018848Rat
1598845Mcs14Mammary carcinoma susceptibility QTL 140.0001mammary gland integrity trait (VT:0010552)mammary tumor number (CMO:0000343)57636977680813390Rat
6907110Mcs28Mammary carcinoma susceptibility QTL 28mammary gland integrity trait (VT:0010552)mammary tumor number (CMO:0000343)57774323978039084Rat
6907115Mcs29Mammary carcinoma susceptibility QTL 29mammary gland integrity trait (VT:0010552)mammary tumor number (CMO:0000343)57781615577988860Rat


Additional Information

RGD Curation Notes
Note Type Note Reference
qtl_cross_type intercross  
qtl_general 8% NaCl diet was started at 12 weeks of age and given for 8 weeks 1581737
qtl_general parental S allele was responsible for increased trait 1581737