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ONTOLOGY REPORT - ANNOTATIONS


Term:nucleotide-excision repair, DNA damage recognition
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Accession:GO:0000715 term browser browse the term
Definition:The identification of lesions in DNA, such as pyrimidine-dimers, intrastrand cross-links, and bulky adducts. The wide range of substrate specificity suggests the repair complex recognizes distortions in the DNA helix.
Synonyms:related_synonym: pyrimidine-dimer repair, DNA damage recognition


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nucleotide-excision repair, DNA damage recognition term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Rad23b RAD23 homolog B, nucleotide excision repair protein involved_in ISO (PMID:19941824) RGD PMID:19941824 NCBI chr 5:70,090,232...70,128,340
Ensembl chr 5:70,090,232...70,128,319
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G Xpa XPA, DNA damage recognition and repair factor involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 5:60,431,673...60,476,438
Ensembl chr 5:60,431,673...60,475,726
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G Xpc XPC complex subunit, DNA damage recognition and repair factor involved_in ISO (PMID:10873465), (PMID:19941824) RGD PMID:10873465 PMID:19941824 NCBI chr 4:123,993,670...124,020,922
Ensembl chr 4:123,993,666...124,021,010
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Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19492
    cellular process 18340
      cellular component organization or biogenesis 6481
        cellular component organization 6235
          organelle organization 3752
            chromosome organization 849
              nucleotide-excision repair, DNA damage recognition 3
                transcription-coupled nucleotide-excision repair, DNA damage recognition 0
Path 2
Term Annotations click to browse term
  biological_process 19492
    metabolic process 11797
      organic substance metabolic process 11337
        organic cyclic compound metabolic process 5834
          nucleobase-containing compound metabolic process 5378
            nucleic acid metabolic process 4888
              DNA metabolic process 883
                DNA repair 488
                  nucleotide-excision repair 57
                    nucleotide-excision repair, DNA damage recognition 3
                      transcription-coupled nucleotide-excision repair, DNA damage recognition 0
paths to the root