Akap8 (A-kinase anchoring protein 8) - Rat Genome Database

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Gene: Akap8 (A-kinase anchoring protein 8) Rattus norvegicus
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Symbol: Akap8
Name: A-kinase anchoring protein 8
RGD ID: 620832
Description: Enables double-stranded DNA binding activity; protein kinase A regulatory subunit binding activity; and zinc ion binding activity. Predicted to be involved in several processes, including cellular response to lipopolysaccharide; cellular response to prostaglandin E stimulus; and negative regulation of tumor necrosis factor production. Predicted to act upstream of or within mitotic chromosome condensation. Located in nuclear matrix. Orthologous to human AKAP8 (A-kinase anchoring protein 8); PARTICIPATES IN protein kinase A (PKA) signaling pathway; INTERACTS WITH 17alpha-ethynylestradiol; 2,3,7,8-tetrachlorodibenzodioxine; 2,4-dibromophenyl 2,4,5-tribromophenyl ether.
Type: protein-coding
RefSeq Status: PROVISIONAL
Previously known as: A kinase (PRKA) anchor protein 8; A kinase anchor protein 8; A-kinase anchor protein 8; A-kinase anchor protein 95 kDa; AKAP 95; AKAP-8; Akap95
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCr8 - GRCr8 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8711,966,769 - 11,983,056 (-)NCBIGRCr8
mRatBN7.2711,316,224 - 11,332,523 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl711,316,228 - 11,332,399 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx714,134,699 - 14,150,843 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0716,012,121 - 16,028,265 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0713,883,649 - 13,899,780 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0714,323,298 - 14,339,953 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl714,324,104 - 14,351,918 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0714,477,683 - 14,493,949 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4712,873,303 - 12,889,333 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.1712,873,301 - 12,889,308 (-)NCBI
Celera79,427,350 - 9,443,479 (-)NCBICelera
Cytogenetic Map7q11NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Akap8Ratlong QT syndrome  ISOAKAP8 (Homo sapiens)8554872ClinVar Annotator: match by term: Long QT syndromeClinVarPMID:26132555

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Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Akap8Rat1,2-dimethylhydrazine decreases expressionISOAkap8 (Mus musculus)64804641 and 2-Dimethylhydrazine results in decreased expression of AKAP8 mRNACTDPMID:22206623
Akap8Rat17alpha-ethynylestradiol increases expressionISOAkap8 (Mus musculus)6480464Ethinyl Estradiol results in increased expression of AKAP8 mRNACTDPMID:17942748
Akap8Rat17alpha-ethynylestradiol decreases expressionEXP 6480464Ethinyl Estradiol results in decreased expression of AKAP8 mRNACTDPMID:17557909
Akap8Rat17alpha-ethynylestradiol affects expressionISOAkap8 (Mus musculus)6480464Ethinyl Estradiol affects the expression of AKAP8 mRNACTDPMID:17555576
Akap8Rat17alpha-ethynylestradiol multiple interactionsISOAkap8 (Mus musculus)6480464[Tetrachlorodibenzodioxin co-treated with Ethinyl Estradiol] results in decreased expression of AKAP8 mRNACTDPMID:17942748
Akap8Rat17beta-estradiol decreases expressionISOAkap8 (Mus musculus)6480464Estradiol results in decreased expression of AKAP8 mRNACTDPMID:39298647
Akap8Rat2,3',4,4',5-Pentachlorobiphenyl increases expressionISOAkap8 (Mus musculus)64804642 more ...CTDPMID:31388691
Akap8Rat2,3,7,8-tetrachlorodibenzodioxine multiple interactionsISOAkap8 (Mus musculus)6480464[Tetrachlorodibenzodioxin co-treated with Ethinyl Estradiol] results in decreased expression of AKAP8 mRNACTDPMID:17942748
Akap8Rat2,3,7,8-tetrachlorodibenzodioxine decreases expressionEXP 6480464Tetrachlorodibenzodioxin results in decreased expression of AKAP8 mRNACTDPMID:33387578
Akap8Rat2,3,7,8-tetrachlorodibenzodioxine affects expressionISOAkap8 (Mus musculus)6480464Tetrachlorodibenzodioxin affects the expression of AKAP8 mRNACTDPMID:21570461
Akap8Rat2,4-dibromophenyl 2,4,5-tribromophenyl ether decreases expressionEXP 64804642 more ...CTDPMID:19954255
Akap8Rat2,4-dinitrotoluene affects expressionEXP 64804642 and 4-dinitrotoluene affects the expression of AKAP8 mRNACTDPMID:21346803
Akap8Rat2,6-dinitrotoluene affects expressionEXP 64804642 and 6-dinitrotoluene affects the expression of AKAP8 mRNACTDPMID:21346803
Akap8Rat2-palmitoylglycerol increases expressionISOAKAP8 (Homo sapiens)64804642-palmitoylglycerol results in increased expression of AKAP8 mRNACTDPMID:37199045
Akap8Rat3,3',4,4'-tetrachlorobiphenyl multiple interactionsISOAkap8 (Mus musculus)64804643 more ...CTDPMID:19467301
Akap8Rat3H-1,2-dithiole-3-thione decreases expressionEXP 64804641 and 2-dithiol-3-thione results in decreased expression of AKAP8 mRNACTDPMID:19162173
Akap8Rataflatoxin B1 increases expressionISOAkap8 (Mus musculus)6480464Aflatoxin B1 results in increased expression of AKAP8 mRNACTDPMID:19770486
Akap8Rataflatoxin B1 increases methylationISOAKAP8 (Homo sapiens)6480464Aflatoxin B1 results in increased methylation of AKAP8 exonCTDPMID:30157460
Akap8Ratammonium chloride affects expressionEXP 6480464Ammonium Chloride affects the expression of AKAP8 mRNACTDPMID:16483693
Akap8RatAroclor 1254 decreases expressionISOAkap8 (Mus musculus)6480464Chlorodiphenyl (54% Chlorine) results in decreased expression of AKAP8 mRNACTDPMID:23650126

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Biological Process
1 to 13 of 13 rows

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Akap8Ratcell cycle G2/M phase transition involved_inISOAKAP8 (Homo sapiens)1624291 PMID:16980585RGDPMID:16980585
Akap8Ratcell cycle G2/M phase transition involved_inIEAUniProtKB:O43823 and ensembl:ENSP000002697011600115GO_REF:0000107EnsemblGO_REF:0000107
Akap8Ratcellular response to lipopolysaccharide involved_inISOAkap8 (Mus musculus)1624291 PMID:19531803RGDPMID:19531803
Akap8Ratcellular response to lipopolysaccharide involved_inIEAUniProtKB:Q9DBR0 and ensembl:ENSMUSP000000026991600115GO_REF:0000107EnsemblGO_REF:0000107
Akap8Ratcellular response to prostaglandin E stimulus involved_inISOAkap8 (Mus musculus)1624291 PMID:19531803RGDPMID:19531803
Akap8Ratcellular response to prostaglandin E stimulus involved_inIEAUniProtKB:Q9DBR0 and ensembl:ENSMUSP000000026991600115GO_REF:0000107EnsemblGO_REF:0000107
Akap8Ratimmune system process involved_inIEAUniProtKB-KW:KW-03911600115GO_REF:0000043UniProtGO_REF:0000043
Akap8Ratinnate immune response involved_inIEAUniProtKB-KW:KW-03991600115GO_REF:0000043UniProtGO_REF:0000043
Akap8Ratmitotic chromosome condensation acts_upstream_of_or_withinIEAUniProtKB:Q9DBR0 and ensembl:ENSMUSP000000026991600115GO_REF:0000107EnsemblGO_REF:0000107
Akap8Ratmitotic chromosome condensation acts_upstream_of_or_withinISOAkap8 (Mus musculus)1624291 PMID:12082153RGDPMID:12082153
Akap8Ratnegative regulation of tumor necrosis factor production involved_inISOAkap8 (Mus musculus)1624291 PMID:19531803RGDPMID:19531803
Akap8Ratnegative regulation of tumor necrosis factor production involved_inIEAUniProtKB:Q9DBR0 and ensembl:ENSMUSP000000026991600115GO_REF:0000107EnsemblGO_REF:0000107
Akap8Ratprotein transport involved_inIEAUniProtKB-KW:KW-06531600115GO_REF:0000043UniProtGO_REF:0000043
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Cellular Component
1 to 20 of 21 rows

  
Object Symbol
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Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Akap8Ratcondensed chromosome located_inIEAUniProtKB:Q9DBR0 and ensembl:ENSMUSP000000026991600115GO_REF:0000107EnsemblGO_REF:0000107
Akap8Ratcondensed chromosome located_inISOAkap8 (Mus musculus)1624291 PMID:12082153RGDPMID:12082153
Akap8Ratcytoplasm located_inIEAUniProtKB-SubCell:SL-00861600115GO_REF:0000044UniProtGO_REF:0000044
Akap8Ratcytoplasm located_inIEAUniProtKB-KW:KW-09631600115GO_REF:0000043UniProtGO_REF:0000043
Akap8Ratfemale pronucleus located_inISOAkap8 (Mus musculus)1624291 PMID:12082153RGDPMID:12082153
Akap8Ratfemale pronucleus located_inIEAUniProtKB:Q9DBR0 and ensembl:ENSMUSP000000026991600115GO_REF:0000107EnsemblGO_REF:0000107
Akap8Ratnuclear matrix  IDA 724798 RGD 
Akap8Ratnuclear matrix located_inIEAUniProtKB:Q9DBR0 and ensembl:ENSMUSP000000026991600115GO_REF:0000107EnsemblGO_REF:0000107
Akap8Ratnuclear matrix is_active_inIBAMGI:1860606 more ...1600115GO_REF:0000033GO_CentralGO_REF:0000033
Akap8Ratnuclear matrix located_inISOAkap8 (Mus musculus)1624291 PMID:16751186RGDPMID:16751186
Akap8Ratnuclear matrix located_inIEAUniProtKB-SubCell:SL-01811600115GO_REF:0000044UniProtGO_REF:0000044
Akap8Ratnucleolus part_ofISOAKAP8 (Homo sapiens)1624291 PMID:26683827RGDPMID:26683827
Akap8Ratnucleolus located_inIEAUniProtKB-SubCell:SL-01881600115GO_REF:0000044UniProtGO_REF:0000044
Akap8Ratnucleolus part_ofIEAUniProtKB:O43823 and ensembl:ENSP000002697011600115GO_REF:0000107EnsemblGO_REF:0000107
Akap8Ratnucleoplasm located_inIEAUniProtKB:O43823 and ensembl:ENSP000002697011600115GO_REF:0000107EnsemblGO_REF:0000107
Akap8Ratnucleoplasm located_inISOAKAP8 (Homo sapiens)1624291 RGDGO_REF:0000052
Akap8Ratnucleus located_inIEAUniProtKB-KW:KW-05391600115GO_REF:0000043UniProtGO_REF:0000043
Akap8Ratnucleus located_inIEAUniProtKB:Q9DBR0 and ensembl:ENSMUSP000000026991600115GO_REF:0000107EnsemblGO_REF:0000107
Akap8Ratnucleus located_inISOAkap8 (Mus musculus)1624291 PMID:12082153RGDPMID:12082153
Akap8Ratnucleus is_active_inIBAMGI:1860606 more ...1600115GO_REF:0000033GO_CentralGO_REF:0000033
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Molecular Function
1 to 19 of 19 rows

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Akap8RatDNA binding  IDA 724798 RGD 
Akap8RatDNA binding enablesIEAUniProtKB-KW:KW-02381600115GO_REF:0000043UniProtGO_REF:0000043
Akap8RatDNA binding enablesIEAInterPro:IPR0070711600115GO_REF:0000002InterProGO_REF:0000002
Akap8Ratdouble-stranded DNA binding  IDA 724798 RGD 
Akap8Rathistone deacetylase binding enablesISOAKAP8 (Homo sapiens)1624291 PMID:16980585RGDPMID:16980585
Akap8Rathistone deacetylase binding enablesIEAUniProtKB:O43823 and ensembl:ENSP000002697011600115GO_REF:0000107EnsemblGO_REF:0000107
Akap8Ratmetal ion binding enablesIEAUniProtKB-KW:KW-04791600115GO_REF:0000043UniProtGO_REF:0000043
Akap8RatNF-kappaB binding enablesISOAkap8 (Mus musculus)1624291 PMID:19531803RGDPMID:19531803
Akap8RatNF-kappaB binding enablesIEAUniProtKB:Q9DBR0 and ensembl:ENSMUSP000000026991600115GO_REF:0000107EnsemblGO_REF:0000107
Akap8Ratprotein binding enablesISOAKAP8 (Homo sapiens)1624291UniProtKB:O15379 more ...RGDPMID:12740381 more ...
Akap8Ratprotein binding enablesISOAkap8 (Mus musculus)1624291UniProtKB:P25799 more ...RGDPMID:16751186 and PMID:19531803
Akap8Ratprotein binding enablesISOAKAP8 (Canis lupus familiaris)1624291UniProtKB:P24864 more ...RGDPMID:14641107 and PMID:16721056
Akap8Ratprotein binding enablesIPIUniProtKB:Q616565128520PMID:11279182IntAct 
Akap8Ratprotein kinase A regulatory subunit binding  IDA 724798 RGD 
Akap8Ratprotein kinase A regulatory subunit binding enablesIBAPANTHER:PTN000257171 more ...1600115GO_REF:0000033GO_CentralGO_REF:0000033
Akap8Ratprotein kinase A regulatory subunit binding enablesIEAUniProtKB:O43823 and ensembl:ENSP000002697011600115GO_REF:0000107EnsemblGO_REF:0000107
Akap8Ratprotein kinase A regulatory subunit binding enablesISOAKAP8 (Homo sapiens)1624291UniProtKB:P13861 and PMID:17911601RGDPMID:17911601
Akap8Ratzinc ion binding  IDA 724798 RGD 
Akap8Ratzinc ion binding enablesIEAUniProtKB-KW:KW-08631600115GO_REF:0000043UniProtGO_REF:0000043
1 to 19 of 19 rows

RGD Manual Annotations


  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Akap8Ratprotein kinase A (PKA) signaling pathway   ISOAKAP8 (Homo sapiens)2312475 RGD 
Akap8Ratprotein kinase A (PKA) signaling pathway   ISOAKAP8 (Homo sapiens)2312477 RGD 

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#
Reference Title
Reference Citation
1. A-kinase-anchoring protein AKAP95 is targeted to the nuclear matrix and associates with p68 RNA helicase. Akileswaran L, etal., J Biol Chem. 2001 May 18;276(20):17448-54. Epub 2001 Feb 22.
2. A-kinase anchoring proteins: from protein complexes to physiology and disease. Carnegie GK, etal., IUBMB Life. 2009 Apr;61(4):394-406.
3. Cloning and characterization of AKAP 95, a nuclear protein that associates with the regulatory subunit of type II cAMP-dependent protein kinase. Coghlan VM, etal., J Biol Chem 1994 Mar 11;269(10):7658-65.
4. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
5. Rat ISS GO annotations from GOA human gene data--August 2006 GOA data from the GO Consortium
6. Rat ISS GO annotations from MGI mouse gene data--August 2006 MGD data from the GO Consortium
7. Electronic Transfer of LocusLink and RefSeq Data NCBI rat LocusLink and RefSeq merged data July 26, 2002
8. GOA pipeline RGD automated data pipeline
9. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
10. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
11. Localized effects of cAMP mediated by distinct routes of protein kinase A. Tasken K and Aandahl EM, Physiol Rev. 2004 Jan;84(1):137-67.
1 to 11 of 11 rows
PMID:12082153   PMID:12477932   PMID:15878851   PMID:16751186   PMID:16980585   PMID:17911601   PMID:19073898   PMID:19531803   PMID:19946888   PMID:22130794   PMID:22658674   PMID:22681889  
PMID:26683827   PMID:33716104  



Akap8
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8711,966,769 - 11,983,056 (-)NCBIGRCr8
mRatBN7.2711,316,224 - 11,332,523 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl711,316,228 - 11,332,399 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx714,134,699 - 14,150,843 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0716,012,121 - 16,028,265 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0713,883,649 - 13,899,780 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0714,323,298 - 14,339,953 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl714,324,104 - 14,351,918 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0714,477,683 - 14,493,949 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4712,873,303 - 12,889,333 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.1712,873,301 - 12,889,308 (-)NCBI
Celera79,427,350 - 9,443,479 (-)NCBICelera
Cytogenetic Map7q11NCBI
AKAP8
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381915,353,385 - 15,379,787 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1915,353,385 - 15,379,815 (-)EnsemblGRCh38hg38GRCh38
GRCh371915,464,196 - 15,490,598 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 361915,325,335 - 15,351,603 (-)NCBINCBI36Build 36hg18NCBI36
Build 341915,325,335 - 15,351,603NCBI
Celera1915,359,984 - 15,386,240 (-)NCBICelera
Cytogenetic Map19p13.12NCBI
HuRef1915,032,304 - 15,058,582 (-)NCBIHuRef
CHM1_11915,463,860 - 15,490,252 (-)NCBICHM1_1
T2T-CHM13v2.01915,478,331 - 15,504,764 (-)NCBIT2T-CHM13v2.0
Akap8
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391732,522,646 - 32,540,212 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1732,522,646 - 32,540,212 (-)EnsemblGRCm39 Ensembl
GRCm381732,303,672 - 32,321,238 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1732,303,672 - 32,321,238 (-)EnsemblGRCm38mm10GRCm38
MGSCv371732,440,621 - 32,458,098 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361732,035,284 - 32,052,761 (-)NCBIMGSCv36mm8
Celera1733,224,515 - 33,241,992 (-)NCBICelera
Cytogenetic Map17B1NCBI
cM Map1717.48NCBI
Akap8
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554957,874,746 - 7,892,944 (+)EnsemblChiLan1.0
ChiLan1.0NW_0049554957,874,655 - 7,893,209 (+)NCBIChiLan1.0ChiLan1.0
AKAP8
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v22020,269,069 - 20,293,662 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11919,271,846 - 19,296,405 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01914,888,201 - 14,912,739 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11915,872,536 - 15,897,661 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1915,872,536 - 15,897,661 (-)Ensemblpanpan1.1panPan2
AKAP8
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.12046,800,917 - 46,817,397 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl2046,800,872 - 46,817,397 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha2046,648,485 - 46,664,965 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.02047,287,578 - 47,304,050 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl2047,287,529 - 47,305,307 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.12046,522,426 - 46,538,895 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.02046,939,069 - 46,955,544 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.02047,212,596 - 47,229,069 (+)NCBIUU_Cfam_GSD_1.0
Akap8
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024405118205,574,820 - 205,593,183 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365965,124,083 - 5,142,027 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049365965,123,988 - 5,142,326 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
AKAP8
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl262,222,249 - 62,241,611 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1262,222,060 - 62,241,631 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2261,797,360 - 61,817,852 (+)NCBISscrofa10.2Sscrofa10.2susScr3
AKAP8
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1613,965,014 - 13,987,586 (-)NCBIChlSab1.1ChlSab1.1chlSab2
Vero_WHO_p1.0NW_0236660745,520,384 - 5,543,643 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Akap8
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046249012,451,369 - 2,487,031 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046249012,452,506 - 2,471,714 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

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Variants in Akap8
32 total Variants

Predicted Target Of
Summary Value
Count of predictions:425
Count of miRNA genes:236
Interacting mature miRNAs:283
Transcripts:ENSRNOT00000008827
Prediction methods:Microtar, Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


1 to 10 of 16 rows
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
61410Bw19Body weight QTL 196.20.001body mass (VT:0001259)body weight (CMO:0000012)7144782185Rat
1300176Hrtrt10Heart rate QTL 103.19heart pumping trait (VT:2000009)heart rate (CMO:0000002)766427026029351Rat
9590102Sffal5Serum free fatty acids level QTL 58.620.001blood free fatty acid amount (VT:0001553)plasma free fatty acids level (CMO:0000546)7532901950329019Rat
1578652Bmd15Bone mineral density QTL 155.2femur mineral mass (VT:0010011)trabecular volumetric bone mineral density (CMO:0001729)7986646760460686Rat
1643004Pain2Pain QTL 21mechanical nociception trait (VT:0002734)self mutilation severity score (CMO:0002145)7946224698011544Rat
631503Bp102Blood pressure QTL 1021.9arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)7144822433Rat
634336Anxrr17Anxiety related response QTL 173.66locomotor behavior trait (VT:0001392)number of entries into a discrete space in an experimental apparatus (CMO:0000960)7924703115097879Rat
10755438Coatc9Coat color QTL 90coat/hair pigmentation trait (VT:0010463)pigmented ventral coat/hair area to total ventral coat/hair area ratio (CMO:0001812)7352928048529280Rat
9590142Scort5Serum corticosterone level QTL 524.40.001blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)7131962314Rat
2298547Neuinf5Neuroinflammation QTL 53.7nervous system integrity trait (VT:0010566)spinal cord Cd74 protein level (CMO:0002131)7946224658265113Rat

1 to 10 of 16 rows
RH133817  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2711,332,819 - 11,333,001 (+)MAPPERmRatBN7.2
Rnor_6.0714,340,317 - 14,340,498NCBIRnor6.0
Rnor_5.0714,494,413 - 14,494,594UniSTSRnor5.0
RGSC_v3.4712,889,797 - 12,889,978UniSTSRGSC3.4
Celera79,443,943 - 9,444,124UniSTS
Cytogenetic Map7q11UniSTS
RH124529  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2711,317,380 - 11,317,591 (+)MAPPERmRatBN7.2
Rnor_6.0714,324,455 - 14,324,665NCBIRnor6.0
Rnor_5.0714,478,840 - 14,479,050UniSTSRnor5.0
RGSC_v3.4712,874,458 - 12,874,668UniSTSRGSC3.4
Celera79,428,505 - 9,428,715UniSTS
Cytogenetic Map7q11UniSTS




alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
nervous system
renal system
reproductive system
respiratory system
9 11 49 113 91 90 59 25 59 6 218 97 93 45 60 31



Ensembl Acc Id: ENSRNOT00000008827   ⟹   ENSRNOP00000008827
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl711,316,228 - 11,332,399 (-)Ensembl
Rnor_6.0 Ensembl714,324,104 - 14,351,918 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000109363   ⟹   ENSRNOP00000088920
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl711,316,228 - 11,332,373 (-)Ensembl
RefSeq Acc Id: NM_053855   ⟹   NP_446307
RefSeq Status: PROVISIONAL
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8711,966,771 - 11,982,900 (-)NCBI
mRatBN7.2711,316,226 - 11,332,356 (-)NCBI
Rnor_6.0714,323,300 - 14,339,853 (-)NCBI
Rnor_5.0714,477,683 - 14,493,949 (-)NCBI
RGSC_v3.4712,873,303 - 12,889,333 (-)RGD
Celera79,427,350 - 9,443,479 (-)RGD
Sequence:
RefSeq Acc Id: XM_006241047   ⟹   XP_006241109
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8711,966,769 - 11,982,621 (-)NCBI
mRatBN7.2711,316,224 - 11,332,085 (-)NCBI
Rnor_6.0714,323,298 - 14,339,565 (-)NCBI
Rnor_5.0714,477,683 - 14,493,949 (-)NCBI
Sequence:
RefSeq Acc Id: XM_017594573   ⟹   XP_017450062
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8711,966,769 - 11,982,958 (-)NCBI
mRatBN7.2711,316,224 - 11,332,437 (-)NCBI
Rnor_6.0714,323,298 - 14,339,953 (-)NCBI
Sequence:
RefSeq Acc Id: XM_039078250   ⟹   XP_038934178
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8711,975,168 - 11,983,056 (-)NCBI
mRatBN7.2711,324,623 - 11,332,523 (-)NCBI
1 to 11 of 11 rows
Protein RefSeqs NP_446307 (Get FASTA)   NCBI Sequence Viewer  
  XP_006241109 (Get FASTA)   NCBI Sequence Viewer  
  XP_017450062 (Get FASTA)   NCBI Sequence Viewer  
  XP_038934178 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein AAA95941 (Get FASTA)   NCBI Sequence Viewer  
  AAH89982 (Get FASTA)   NCBI Sequence Viewer  
  AAI66580 (Get FASTA)   NCBI Sequence Viewer  
  EDL89464 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSRNOP00000008827
  ENSRNOP00000008827.4
GenBank Protein Q63014 (Get FASTA)   NCBI Sequence Viewer  
1 to 11 of 11 rows
RefSeq Acc Id: NP_446307   ⟸   NM_053855
- UniProtKB: Q63014 (UniProtKB/Swiss-Prot),   B2GV93 (UniProtKB/TrEMBL),   A0A8I6AAG3 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006241109   ⟸   XM_006241047
- Peptide Label: isoform X1
- UniProtKB: A0A8I6AAG3 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_017450062   ⟸   XM_017594573
- Peptide Label: isoform X2
- UniProtKB: A0A8I6AAG3 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSRNOP00000008827   ⟸   ENSRNOT00000008827
RefSeq Acc Id: XP_038934178   ⟸   XM_039078250
- Peptide Label: isoform X3
C2H2 AKAP95-type

Name Modeler Protein Id AA Range Protein Structure
AF-Q63014-F1-model_v2 AlphaFold Q63014 1-687 view protein structure


eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen



1 to 24 of 24 rows
Database
Acc Id
Source(s)
BioCyc Gene G2FUF-34829 BioCyc
Ensembl Genes ENSRNOG00000006559 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Transcript ENSRNOT00000008827 ENTREZGENE
  ENSRNOT00000008827.7 UniProtKB/Swiss-Prot
IMAGE_CLONE IMAGE:7317962 IMAGE-MGC_LOAD
  IMAGE:7380301 IMAGE-MGC_LOAD
InterPro AKAP95 UniProtKB/Swiss-Prot
  ZF_C2H2_AKAP95 UniProtKB/Swiss-Prot
KEGG Report rno:116633 UniProtKB/Swiss-Prot
MGC_CLONE MGC:109394 IMAGE-MGC_LOAD
  MGC:188279 IMAGE-MGC_LOAD
NCBI Gene 116633 ENTREZGENE
PANTHER A-KINASE ANCHOR PROTEIN 8 UniProtKB/Swiss-Prot
  PTHR12190 UniProtKB/Swiss-Prot
Pfam AKAP95 UniProtKB/Swiss-Prot
PhenoGen Akap8 PhenoGen
PROSITE ZF_C2H2_AKAP95 UniProtKB/Swiss-Prot
RatGTEx ENSRNOG00000006559 RatGTEx
Superfamily-SCOP Porins UniProtKB/Swiss-Prot
UniProt A0A8I6AAG3 ENTREZGENE, UniProtKB/TrEMBL
  AKAP8_RAT UniProtKB/Swiss-Prot
  B2GV93 ENTREZGENE, UniProtKB/TrEMBL
  Q5EB69_RAT UniProtKB/TrEMBL
  Q63014 ENTREZGENE
1 to 24 of 24 rows


Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2015-11-25 Akap8  A-kinase anchoring protein 8  Akap8  A kinase (PRKA) anchor protein 8  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2004-09-10 Akap8  A kinase (PRKA) anchor protein 8    A kinase anchor protein 8  Name updated 1299863 APPROVED
2002-08-07 Akap8  A kinase anchor protein 8      Symbol and Name status set to provisional 70820 PROVISIONAL

Note Type Note Reference
gene_function anchoring protein that mediates the subcellular compartmentation of cAMP-dependent protein kinase (pka type II) 724707