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Gene: Wapl (WAPL cohesin release factor) Rattus norvegicus

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Symbol:

Wapl

Name:

WAPL cohesin release factor

RGD ID:

1590924

Description:

Predicted to enable ATP-dependent protein-DNA unloader activity. Predicted to be involved in several processes, including negative regulation of DNA replication; negative regulation of sister chromatid cohesion; and protein localization to chromatin. Predicted to be located in several cellular components, including intercellular bridge; mitotic spindle; and nucleoplasm. Orthologous to human WAPL (WAPL cohesin release factor); INTERACTS WITH 17beta-estradiol; 2,3,7,8-tetrachlorodibenzodioxine; bisphenol A.

Type:

protein-coding

RefSeq Status:

VALIDATED

Previously known as:

hypothetical LOC290577; LOC290577; LOC290578; RGD1308960; similar to parallel sister chromatids protein (84.3 kD) (4F208); Wapal; wings apart-like; wings apart-like homolog; wings apart-like homolog (Drosophila); wings apart-like protein homolog

RGD Orthologs

Alliance Orthologs

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	WAPL (WAPL cohesin release factor)	HGNC	Ensembl, HomoloGene, NCBI, Panther
Mus musculus (house mouse):	Wapl (WAPL cohesin release factor)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	Wapl (WAPL cohesin release factor)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	WAPL (WAPL cohesin release factor)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	WAPL (WAPL cohesin release factor)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Wapl (WAPL cohesin release factor)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	WAPL (WAPL cohesin release factor)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	WAPL (WAPL cohesin release factor)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Wapl (WAPL cohesin release factor)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Alliance orthologs ³
Homo sapiens (human):	WAPL (WAPL cohesin release factor)	Alliance	DIOPT (Ensembl Compara\|HGNC\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Mus musculus (house mouse):	Wapl (WAPL cohesin release factor)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Danio rerio (zebrafish):	waplb (WAPL cohesin release factor b)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Danio rerio (zebrafish):	wapla (WAPL cohesin release factor a)	Alliance	DIOPT (Ensembl Compara\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Caenorhabditis elegans (roundworm):	wapl-1	Alliance	DIOPT (Ensembl Compara\|InParanoid\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB)
Drosophila melanogaster (fruit fly):	wapl	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Xenopus tropicalis (tropical clawed frog):	wapl	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)

Latest Assembly:

GRCr8 - GRCr8 Assembly

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	16	10,011,741 - 10,081,472 (+)	NCBI		GRCr8
mRatBN7.2	16	10,005,520 - 10,075,270 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	16	10,004,941 - 10,073,510 (+)	Ensembl		mRatBN7.2 Ensembl
Rnor_6.0	16	11,029,325 - 11,108,867 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	16	11,032,531 - 11,106,589 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	16	9,354,539 - 9,434,346 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	16	10,337,231 - 10,408,154 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
Celera	16	5,142,468 - 5,211,200 (-)	NCBI		Celera
Cytogenetic Map	16	p15	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

clubfoot (ISO)

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

(1->4)-beta-D-glucan (ISO)

1,2-dimethylhydrazine (ISO)

17beta-estradiol (EXP)

2,2',4,4'-Tetrabromodiphenyl ether (ISO)

2,3,7,8-tetrachlorodibenzodioxine (EXP,ISO)

2,4,6-tribromophenol (ISO)

2-hydroxypropanoic acid (ISO)

3,3',5,5'-tetrabromobisphenol A (ISO)

aflatoxin B1 (ISO)

alpha-naphthoflavone (ISO)

aristolochic acid A (ISO)

arsenite(3-) (ISO)

arsenous acid (ISO)

atrazine (ISO)

benzo[a]pyrene diol epoxide I (ISO)

bis(2-ethylhexyl) phthalate (ISO)

bisphenol A (EXP,ISO)

bisphenol F (ISO)

cadmium atom (ISO)

caffeine (ISO)

carbon nanotube (ISO)

CGP 52608 (ISO)

cisplatin (ISO)

cobalt dichloride (EXP,ISO)

coumarin (ISO)

cyclosporin A (ISO)

decabromodiphenyl ether (ISO)

diarsenic trioxide (ISO)

dimethyl sulfoxide (ISO)

enzyme inhibitor (ISO)

ethanol (ISO)

fenthion (ISO)

flutamide (EXP)

folic acid (ISO)

formaldehyde (ISO)

FR900359 (ISO)

indometacin (ISO)

irinotecan (ISO)

ivermectin (ISO)

lead(0) (ISO)

leflunomide (EXP)

methidathion (ISO)

methotrexate (ISO)

nefazodone (EXP)

oxaliplatin (EXP)

paracetamol (ISO)

perfluorohexanesulfonic acid (ISO)

perfluorooctane-1-sulfonic acid (ISO)

quercetin (ISO)

rac-lactic acid (ISO)

sodium arsenite (ISO)

thimerosal (ISO)

titanium dioxide (ISO)

topotecan (EXP)

trimellitic anhydride (ISO)

triptonide (ISO)

valproic acid (ISO)

vitamin E (ISO)

zinc atom (ISO)

zinc(0) (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

mitotic sister chromatid segregation (IEA,ISO)

negative regulation of DNA replication (IEA,ISO)

negative regulation of sister chromatid cohesion (IEA,ISO)

protein localization to chromatin (IEA,ISO)

Cellular Component

chromatin (IEA,ISO)

cytoplasm (IEA,ISO)

cytosol (IEA,ISO)

intercellular bridge (IEA,ISO)

intracellular membrane-bounded organelle (IEA,ISO)

mitotic spindle (IEA,ISO)

nucleoplasm (IEA,ISO)

nucleus (IEA,ISO)

Molecular Function

ATP-dependent protein-DNA unloader activity (IEA,ISO)

protein binding (ISO)

References

References - curated

#	Reference Title	Reference Citation
1.	Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium.	Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2.	ClinVar Automated Import and Annotation Pipeline	RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
3.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions

Additional References at PubMed

PMID:15620708	PMID:17113138	PMID:19696148	PMID:19907496	PMID:21111234	PMID:23920377	PMID:23975099

Genomics

Comparative Map Data

Wapl
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	16	10,011,741 - 10,081,472 (+)	NCBI		GRCr8
mRatBN7.2	16	10,005,520 - 10,075,270 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	16	10,004,941 - 10,073,510 (+)	Ensembl		mRatBN7.2 Ensembl
Rnor_6.0	16	11,029,325 - 11,108,867 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	16	11,032,531 - 11,106,589 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	16	9,354,539 - 9,434,346 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	16	10,337,231 - 10,408,154 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
Celera	16	5,142,468 - 5,211,200 (-)	NCBI		Celera
Cytogenetic Map	16	p15	NCBI

WAPL
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	10	86,435,256 - 86,521,792 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	10	86,435,256 - 86,521,792 (-)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	10	88,195,013 - 88,281,549 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	10	88,184,993 - 88,271,521 (-)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	10	88,184,993 - 88,271,521	NCBI
Celera	10	82,193,855 - 82,283,880 (-)	NCBI		Celera
Cytogenetic Map	10	q23.2	NCBI
HuRef	10	82,045,663 - 82,136,011 (-)	NCBI		HuRef
CHM1_1	10	88,476,841 - 88,563,395 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	10	87,315,788 - 87,405,903 (-)	NCBI		T2T-CHM13v2.0

Wapl
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	14	34,394,086 - 34,469,940 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	14	34,395,885 - 34,469,940 (+)	Ensembl		GRCm39 Ensembl
GRCm38	14	34,672,379 - 34,747,983 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	14	34,673,928 - 34,747,983 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	14	35,487,114 - 35,559,403 (+)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	14	33,503,214 - 33,575,044 (+)	NCBI		MGSCv36	mm8
Celera	14	30,941,041 - 31,013,556 (+)	NCBI		Celera
Cytogenetic Map	14	B	NCBI
cM Map	14	20.84	NCBI

Wapl
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955510	5,593,335 - 5,674,221 (-)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955510	5,596,622 - 5,674,221 (-)	NCBI	ChiLan1.0	ChiLan1.0

WAPL
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	8	98,429,689 - 98,520,788 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	10	98,435,008 - 98,529,223 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	10	82,862,852 - 82,953,284 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	10	86,422,170 - 86,512,224 (-)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	10	86,422,170 - 86,512,207 (-)	Ensembl	panpan1.1		panPan2

WAPL
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	4	34,219,644 - 34,297,456 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	4	34,219,645 - 34,302,839 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	4	34,208,790 - 34,290,635 (-)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	4	34,549,886 - 34,631,818 (-)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	4	34,549,890 - 34,631,776 (-)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	4	34,422,845 - 34,504,994 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	4	34,592,237 - 34,674,023 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	4	35,097,493 - 35,179,330 (-)	NCBI		UU_Cfam_GSD_1.0

Wapl
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024407213	44,243,869 - 44,321,323 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936804	354,195 - 431,830 (+)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936804	354,201 - 431,655 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

WAPL
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	14	87,492,458 - 87,588,543 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	14	87,492,452 - 87,588,678 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	14	94,746,694 - 94,842,934 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

WAPL
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	9	45,335,423 - 45,420,785 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	9	45,334,981 - 45,420,787 (+)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666048	5,449,262 - 5,535,020 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Wapl
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla 1.0	NW_004624841	534,148 - 611,014 (+)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants

Variants in Wapl
229 total Variants

QTLs in Region (GRCr8)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
631561	Hcuc2	Hepatic copper content QTL 2	2.8		liver copper amount (VT:0003065)	liver total copper weight (CMO:0001507)	16	1	39533949	Rat
1582235	Insul8	Insulin level QTL 8	3.3	0.0063	blood insulin amount (VT:0001560)	calculated serum insulin level (CMO:0000359)	16	1	26727669	Rat
2307172	Activ4	Activity QTL 4	3.71	0.00023	locomotor behavior trait (VT:0001392)	number of entries into a discrete space in an experimental apparatus (CMO:0000960)	16	1	33418960	Rat
1354584	Despr6	Despair related QTL 6	3.1	0.0067	locomotor behavior trait (VT:0001392)	amount of time spent in voluntary immobility (CMO:0001043)	16	1	39533930	Rat
2302380	Slep6	Serum leptin concentration QTL 6	3.36		blood leptin amount (VT:0005667)	serum leptin level (CMO:0000780)	16	1	32139025	Rat
737819	Hcas4	Hepatocarcinoma susceptibility QTL 4	4.43		liver integrity trait (VT:0010547)	volume of individual liver tumorous lesion (CMO:0001078)	16	4227609	46975965	Rat
9590151	Scort8	Serum corticosterone level QTL 8	8.45	0.001	blood corticosterone amount (VT:0005345)	plasma corticosterone level (CMO:0001173)	16	1	30836262	Rat
1354625	Despr7	Despair related QTL 7	3.16	0.016	locomotor behavior trait (VT:0001392)	amount of time spent in voluntary immobility (CMO:0001043)	16	1	44977551	Rat
61338	Bp23	Blood pressure QTL 23	4.3		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	16	4227609	49227609	Rat
61405	Niddm6	Non-insulin dependent diabetes mellitus QTL 6	3.66	0.001	blood glucose amount (VT:0000188)	plasma glucose level (CMO:0000042)	16	4227609	48972724	Rat
631830	Alc7	Alcohol consumption QTL 7	2.9		consumption behavior trait (VT:0002069)	ethanol drink intake rate (CMO:0001407)	16	1	26727669	Rat
7411664	Foco30	Food consumption QTL 30	11	0.001	eating behavior trait (VT:0001431)	feed conversion ratio (CMO:0001312)	16	1	44588133	Rat
1600378	Arunc4	Aerobic running capacity QTL 4		0.03	exercise endurance trait (VT:0002332)	maximum distance run on treadmill (CMO:0001406)	16	380245	80345693	Rat
70183	BpQTLcluster13	Blood pressure QTL cluster 13	3.654		arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	16	4227609	43025077	Rat
1600369	Hcas8	Hepatocarcinoma susceptibility QTL 8			liver integrity trait (VT:0010547)	liver tumorous lesion number (CMO:0001068)	16	1	22477621	Rat
737826	Alc11	Alcohol consumption QTL 11	3.2		consumption behavior trait (VT:0002069)	ethanol drink intake rate (CMO:0001407)	16	4227609	60252231	Rat
737825	Alc13	Alcohol consumption QTL 13	4.5		consumption behavior trait (VT:0002069)	ethanol drink intake rate (CMO:0001407)	16	4227609	16039848	Rat
2303566	Bw90	Body weight QTL 90	2		body mass (VT:0001259)	body weight (CMO:0000012)	16	1	39533930	Rat
2312663	Slep9	Serum leptin concentration QTL 9		0.001	blood leptin amount (VT:0005667)	serum leptin level (CMO:0000780)	16	832236	59492508	Rat
2306902	Bp339	Blood pressure QTL 339		0.01	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	16	3380150	43025077	Rat
1300133	Rf24	Renal function QTL 24	3.64		blood creatinine amount (VT:0005328)	creatinine clearance (CMO:0000765)	16	3380150	21361552	Rat
2312660	Bw95	Body weight QTL 95		0.05	inguinal fat pad mass (VT:0010424)	inguinal fat pad weight to body weight ratio (CMO:0001253)	16	832236	59492508	Rat
2312666	Insul16	Insulin level QTL 16		0.01	blood insulin amount (VT:0001560)	serum insulin level (CMO:0000358)	16	832236	59492508	Rat
634355	Rends4	Renal damage susceptibility QTL 4		0.05	kidney blood vessel morphology trait (VT:0000530)	organ lesion measurement (CMO:0000677)	16	1	26727669	Rat
61372	Bp40	Blood pressure QTL 40	2.2		blood pressure trait (VT:0000183)	systolic blood pressure (CMO:0000004)	16	4227730	17696785	Rat
2293343	Glom16	Glomerulus QTL 16	7.4		kidney glomerulus integrity trait (VT:0010546)	kidney sclerotic glomeruli count to total glomeruli count ratio (CMO:0001269)	16	832236	46053497	Rat
2301406	Kidm39	Kidney mass QTL 39		0.002	kidney mass (VT:0002707)	both kidneys wet weight to body weight ratio (CMO:0000340)	16	2851709	15884239	Rat
6903319	Bw114	Body weight QTL 114	2.7	0.0037	body mass (VT:0001259)	body weight (CMO:0000012)	16	1	43534949	Rat
2312669	Stl23	Serum triglyceride level QTL 23		0.01	blood triglyceride amount (VT:0002644)	serum triglyceride level (CMO:0000360)	16	832236	59492508	Rat

Markers in Region

AU046803

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	16	10,034,415 - 10,034,657 (+)	MAPPER	mRatBN7.2
Rnor_6.0	16	11,057,795 - 11,058,034	NCBI	Rnor6.0
Rnor_5.0	16	9,382,774 - 9,383,013	UniSTS	Rnor5.0
RGSC_v3.4	16	10,365,960 - 10,366,199	UniSTS	RGSC3.4
Celera	16	5,182,680 - 5,182,891	UniSTS
Cytogenetic Map	16	p15	UniSTS

RH130055

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	2	60,889,134 - 60,889,352 (+)	MAPPER	mRatBN7.2
mRatBN7.2	16	10,074,951 - 10,075,169 (+)	MAPPER	mRatBN7.2
Rnor_6.0	16	11,108,549 - 11,108,766	NCBI	Rnor6.0
Rnor_6.0	2	61,907,585 - 61,907,802	NCBI	Rnor6.0
Rnor_5.0	16	9,434,028 - 9,434,245	UniSTS	Rnor5.0
Rnor_5.0	2	82,783,104 - 82,783,321	UniSTS	Rnor5.0
RGSC_v3.4	2	61,297,441 - 61,297,658	UniSTS	RGSC3.4
RGSC_v3.4	16	10,409,488 - 10,409,705	UniSTS	RGSC3.4
Celera	16	5,142,569 - 5,142,786	UniSTS
Celera	2	57,802,577 - 57,802,794	UniSTS
RH 3.4 Map	16	98.1	UniSTS
Cytogenetic Map	2	q16	UniSTS
Cytogenetic Map	16	p15	UniSTS

RH143495

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	16	10,052,583 - 10,052,703 (+)	MAPPER	mRatBN7.2
Rnor_6.0	16	11,082,661 - 11,082,780	NCBI	Rnor6.0
Rnor_5.0	16	9,409,048 - 9,409,167	UniSTS	Rnor5.0
RGSC_v3.4	16	10,385,306 - 10,385,425	UniSTS	RGSC3.4
Celera	16	5,164,632 - 5,164,751	UniSTS
RH 3.4 Map	16	98.2	UniSTS
Cytogenetic Map	16	p15	UniSTS

BE116851

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	16	10,040,808 - 10,040,964 (+)	MAPPER	mRatBN7.2
Rnor_6.0	16	11,064,182 - 11,064,337	NCBI	Rnor6.0
Rnor_5.0	16	9,389,161 - 9,389,316	UniSTS	Rnor5.0
RGSC_v3.4	16	10,372,351 - 10,372,506	UniSTS	RGSC3.4
Celera	16	5,176,372 - 5,176,527	UniSTS
RH 3.4 Map	16	100.5	UniSTS
Cytogenetic Map	16	p15	UniSTS

RH137292

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	16	10,005,025 - 10,005,208 (+)	MAPPER	mRatBN7.2
Rnor_6.0	16	11,028,425 - 11,028,607	NCBI	Rnor6.0
Rnor_5.0	16	9,353,404 - 9,353,586	UniSTS	Rnor5.0
RGSC_v3.4	16	10,336,196 - 10,336,378	UniSTS	RGSC3.4
Celera	16	5,212,158 - 5,212,340	UniSTS
RH 3.4 Map	16	98.0	UniSTS
Cytogenetic Map	16	p15	UniSTS

AI179133

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	16	10,023,908 - 10,024,004 (+)	MAPPER	mRatBN7.2
Rnor_6.0	16	11,047,291 - 11,047,386	NCBI	Rnor6.0
Rnor_5.0	16	9,372,270 - 9,372,365	UniSTS	Rnor5.0
RGSC_v3.4	16	10,355,332 - 10,355,427	UniSTS	RGSC3.4
Celera	16	5,193,294 - 5,193,389	UniSTS
RH 3.4 Map	16	98.0	UniSTS
Cytogenetic Map	16	p15	UniSTS

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Download All Expressed Objects for this Gene

alimentary part of gastrointestinal system	appendage	circulatory system	ectoderm	endocrine system	endoderm	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	mesenchyme	mesoderm	nervous system	renal system	reproductive system	respiratory system
9	11	49	113	91	90	59	25	59	6	218	97	93	45	60	31

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_001427279	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006252724	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006252725	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006252726	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017605001	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063275139	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	JAXUCZ010000016	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSRNOT00000078390 ⟹ ENSRNOP00000070173

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	16	10,004,941 - 10,073,510 (+)	Ensembl
Rnor_6.0 Ensembl	16	11,032,531 - 11,106,589 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000094342 ⟹ ENSRNOP00000083400

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	16	10,004,941 - 10,073,510 (+)	Ensembl

RefSeq Acc Id:

NM_001427279 ⟹ NP_001414208

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	16	10,012,110 - 10,081,472 (+)	NCBI

RefSeq Acc Id:

XM_006252724 ⟹ XP_006252786

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	16	10,012,551 - 10,081,472 (+)	NCBI
mRatBN7.2	16	10,006,341 - 10,075,270 (+)	NCBI
Rnor_6.0	16	11,029,763 - 11,108,867 (+)	NCBI
Rnor_5.0	16	9,354,539 - 9,434,346 (+)	NCBI

Sequence:

show sequence

CGGAGTGAGTTGGGGCGGGTGGAGGAGGCAGGGGCGGTGCGAGTCTCGTTGCTCACCTGGCTTC
TAAGGAAGTTGGGCACTGGAGGATCTGAAGAACTCTTTCCCTTCCCACCTCTCATTTTTGCCTT
TTGAGTTCTTTTCCGGGCGGCTTCTTGATTGACTAATCTCTTCCAAACCCGGTCCGGTTGATTT
GAGTCCTGAATTCTTTTCCCCGTCGTCTCCACCGCCTCTAGCCGTCACCGAGGCCTTGCTTCGG
GGACTCAGTAGCAGAAGCTTCCGGGGCGTCCGAAGCGACATCCCTTTCCTAGGCGGTGGGGGTT
GGGAGGAGAAAAGTTGCGTGAGTGTCCAGCCCGAGGGGTGTCTCGGTTACTGCCTCGGGGCGCA
CTCGCAGCCTCAGGGAATATGAAACAGGTGTCAAAATGACATCCAGATTTGGGAAAACTTACAG
TAGGAAAGGAGGAAATGGCAGTTCAAAATTTGATGAAGTTTTTTCCAACAAACGGACTACTCTT
AGTACAAAATGGGGAGAGACCACATTTATGGCTAAATTAGGGCAGAAGAGGCCCAATTTCAAAC
CAGATATTCAAGAAATTCCGAAGAAACCTAAAGTAGAAGAAGAAGATACTGGAGATCCTTTTGG
TTTTGATAGTGATGATGAGTCTCTACCTGTTTCTTCAAAAAGTTTAGCCCAGGGTAAGGGTTCC
TCTTACTCAGAATCCAGTGAAGCTGTTCAGCTGGAAGAAGTCACTTCAGTACTTGAAGCTAATA
GCAAATGTAGTCATGCGGTGGGTGAAGACAGTTTTGCTTCTGATAGATGCTTACTTGTGGAGGA
TTCTTTAATTGGGAAAGAAAAGAACACAAATAGAATTCCAGAAGACAATGCAAACAAAAGTAGT
TGTACTAAGTTGATAACTTCAGATAAAGTGGAGAATTTTAGTGAAGAACATGAAAAAAATAGTC
ACCATTTTCACAAGAATGCTGAAGATAGTACTAAGAAGCCCAATGCAGAGACTGTAGCGGCTTC
TGAATGTAAAGCTGATGAGACTAAAACAAGTGATACTTGGAATTCCCAGTCTGCAAAAAGAACA
GAGTCTCCATCTGAAAGTTGTCCAGTCAAAGGATCTGTAAGAACTGGTTTATATGAATGGGATA
ATGATTTTGAAGATATCAGATCAGAAGACTGTATTTTAAGTTTGGATAATGATTCTCTTTTGGA
GATGAAGGATGAGGATTTAAAAAATCGGATTGGAGGATTGGAAAATCTAAACGAAGCCTTTGAA
GAAGATATTATACAAAGTGTTCTTAGGCCAAGCAACTGTAGGACGTACTGTAGGGCCAATAAAG
CAAAATCCTCACAGGGAACGTCAAATTTTGATAAGCTAATGGATGGCACCAGTCAGACCTTAGC
CAAAGCAAACAGTGAATCAAGTAAAGATGGCCTGAATCAGGCAAAGAAAGGTAGTGTAAGTTGT
GGGACCAGTTTTAGAGGAACAGTTGGACGGACTAGAGATTACACTGTTTTACATCCATCTTGCT
TGTCAGTTTGTAATGTTACCATCCAGGATACTATGGAAAGGAGTATGGATGAGTTCACGGCGTC
CACTCCTGCAGATTTAGGAGAAGCTGGCCGGCTCAGAAAAAAGGCAGATATTGCAACTTCCAAG
ACCACTACTAGATTTCGACCTAGTAATACTAAGTCCAAAAAGGATGTTAAACTTGAATTTTTTG
GTTTTGAAGATCATGATGAGACAGGAGGTGATGAAGGGGGTTCTGGAAGTTCTAATTACAAAAT
TAAATATTTTGGCTTTGACGATCTCAGTGAAAGTGAAGATGATGACGATGATGACTGTCAAGTG
GAAAGAAAGAAAGACAAAAAAAGAACTAAAACAGCTCCATCACCTTCCCAGCAGCCTCCTCCTG
AAAGCAGTGACAATTCCCAGGATAGTCAGTCTAGTACTAATAATGCAGAAAACTTGGATTTTAC
AGAGGACTTGCCTGGTGTGCCTGAGAGTGTGAAGAAGCCCATAAGTAAACAAGGAGATAAATCC
AAGGAAAACACCAGAAAGATTTTTAGTGGCCCCAAACGGTCACCTACAAAAGCTGTATATAATG
CCAGGCATTGGAACCATCCAGACTCACAGGAACTGCCTGGACCACCAATAGTAAAACCTCAGAG
TGTCACAGTGAGGCTGTCTTCAAAGGAACCAAATCAAAAAGATGATGGAGTTTTTAAGGCTCCT
GCACCACCACTCAAAGTGATAAAAACTGTGACAATACCTACTCAGCCCTACCAAGAAATAGTTA
CTGCACTGAAATGCAGAAAAGAAGACAAAGAATTATATACTGTTGTTCAGCACGTGAAGCACTT
CAATGATGTGGTGGAGTTTGGTGAAAATCAAGAGTTCACTGATGACATTGAATACTTGTTAAGT
GGCTTAAAGAGTACTCAGCCTCTAAACACACGTTGCCTTAGTGTTATCAGCTTGGCTACTAAAT
GTGCCATGCCCAGTTTTCGAATGCATCTGAGAGCACATGGGATGGTTGCAATGGTCTTTAAAAC
TCTAGATGATTCCCAGCACCATCAGAATCTGTCCCTCTGTACAGCTGCTCTCATGTACATATTG
AGTAGAGATCGTTTGAACATGGATCTTGATAGGGCCAGCCTAGATCTCATGATTCGGCTTTTGG
AACTGGAACAAGATGCTTCTTCAGCTAAGCTACTGAATGAAAAAGACATGAACAAGATCAAAGA
AAAAATCCGAAGACTCTGCGAAACCGTGCACAATAAGCATCTTGATCTAGAGAATATAACGACT
GGTCATTTAGCTATGGAGACATTGCTCTCCCTCACTTCCAAACGAGCAGGAGATTGGTTTAAAG
AAGAGCTCCGGCTTCTGGGTGGTCTGGATCATATTGTAGATAAAGTAAAAGAGTGTGTGGATCA
TTTAAGTAGAGATGAGGATGAAGAGAAACTAGTAGCCTCATTATGGGGAGCAGAAAGATGTTTA
CGAGTTCTGGAGAGTGTAACAGTGCATAATCCAGAGAATCAAAGCTACTTGATAGCCTATAAAG
ATTCACAACTCATTATTTCATCAGCTAAAGCATTACAGCATTGTGAAGACCTGATTCAGCAGTA
TAACCGCGCTGAGAACAGCATCTGTATAGCAGACAGTAAACCTCTGCCTTACCAGAATGTAACT
AACCATGTGGGCAAAGCAGTGGAGGACTGCATGAGGGCGATCATTGGGGTATTGCTCAATTTAA
CTAATGATAATGAGTGGGGCAGCACAAAGACAGGAGAACAAGAAGGACTCATAGGCACAGCGAT
GAACTGTGTCCTTCAGGTTCCAAAGTACCTACCTCAGGAGCAGAGATTTGATATCCGAGTGCTG
GGATTGGGTCTACTGATCAATCTGGTGGAGTATAGTGCCCGGAATCGACACTGCCTTGTCAACA
TGGAAACATCCTGTTCCTTTGATTCCTCCTTCTCTAGTGGAGAAGGAGATCATAATTTAAGGCT
AGCTGGACAAGTTCATGCTGTTCAGGCTTTAGTACAGCTATTTCTCGAACGAGAAAGAGCGGCG
CAGTTGGCAGAAAGTAAAACAGATGAGTTGATCAAAGATGCTCCCACCACCCAGCACGATAAGA
GTGGAGAGTGGCAGGAAACAAGTGGAGAGATACAGTGGGTGTCGACGGAAAAGACTGATGGTGC
TGAGGAGAAGCAGAAGAAGGAAGATGAGGATGAAGAACTTGACCTCAATAAAGCCCTTCAGCAT
GCTGGCAAACACATGGAAGACTGCATCGTAGCCTCTTACACAGCCCTGCTTCTTGGGTGTCTCT
GCCAGGAAAGTCCAATCAATGTAACTACAGTAAGAGAATATCTTCCAGAAGGAGATTTCTCCAT
AATGACAGAGATGCTTAAAAAATTCTTAAGCTTCATGAATCTTACCTGTGCTGTTGGAACAACA
GGCCAGAAGTCTATCTCTAGAGTGATTGAGTATTTGGAACACTGCTAGCTGCTTTACCTTTGCT
TCAGGTGCTTGGTAATGCTGGAGCTCTCCTTAGACAGAGAACAGACAGGAAAGAAGTCCTGGAA
GACAAACCAAGAACGTTCATCAGTATCATTCGTGTTTGGATTTTTATGATCACCTGATTTCTTC
ATCATGCATTCTGCATTTGCTAAATGACAGTTACTACATCAATCTGCAGCTATCAAAAATGAGG
GAAAAGGTTCAGGCTGTTAACAGTCCCATGCAGTATTTAAATACACTTACTTGGCAGAGTCTAT
GCCCTCCCCTTCTTTCCTTGCTTTGTTTCAGGCAAGGGTTAAAGGGGGAAATTGTGCTGCTGTT
AGTGCAACTGCTGTGTATGTTGAGCCACTGTTGTCATGCCAGTCAGGTGCAAGGCAGCCTAGCT
ACTGAGCTGTTGAGTGTCCGAGGACATTCGAGACAGCAGCTTAGGTCCTTTTTCAGGCTCATTT
GCTTTTGCTTTTTGTTGAATGATTCCAATCGTAAATAAAGCTTTTAATAATTTTGTGAATTTTT
TTTGGTTGTTGTTCCCTGAACTACTGTCTATATTTAAAATTAGATGGAATCCAAAGACACAAGG
GATTAATAGTATATTTTTTTATTCTTGATTAGGTTTGGGTGTTGAACTATTTTTCACTTCTGAG
ACCATGACCATATTCAATGTCATACCATTATGTGTCATAGCTATAGGCACAAGAAAACAAATAG
CAGTTTGAGGGAATATTATATTATATAAGATAATGTGCCCTGTTAAAGGATTAAGCAAAAATAG
ACAAACCCAGGGTAGTTTACACTTAATGCTAGGGAGGCTCTTGAAACATTGTTAAGTTTTGAGG
GAAGTTCTCTAGATATATTTTCTAATGTTCAGTACAGTAAAATATAAGGAAGCTAAAACACCAA
TGTGGAATTCATTTTTCCAGATAGCGTGTATATTCTTCTATAGAGTGACAGGATCAATTGCATA
TGCGCAAAGCCTTAAAATTGCAGGTGTAGAGAAGACCCTTTTTATTCACATCCTATGTTCATAG
AGCAATTGTTTAGACAATGATTGTGGAACACACAGAACATGGTTTATAGGTTAAATTTCATAGT
TTTTTTTTTCTTTTTTTCCTGTATTGTTCAGACCACTGGTTATACATTTCCCCCTTTTTATTAA
TCTGCCTGAGGACAGACAGGCTTTCCAGAGATGTTTCATTAATACTTTTAATTACCTTTCAGGT
AGTTCCATCATGTTTCTTCATTGGATTTGTAAAACTTGAAGCCATAAAAATATTAGTTTGGTGT
GTATTGGGGAAAATAGCTGAAAGTCTAATTTTGACTCATTTTAGACTTTGTTATTTCCTTGTAT
AAAGTAACAAACCGGGGCTCTTGTATCAGTGCCATCTGTAATGTTTTTAAATGCAGTGGCTGCC
TTCTATTGTCTTCCTATTTTTGATAATGCAGATTGTTGGGAAATCTATAAGGAAGTAACTGACT
CTAGGCAAATTGTTTTCTTCCTTCTACCCACCCAAACCCTACCCATCACCTTTTTGGAACACAG
TATGCCAGTGTAATGTGGGAACCATTGAGACTGTATTTGCCCTGAGTACCAAACTAATTTAGTG
AACTTTTTTCTTTTAAAGCATACTGGTAAATGATGTCCACAAATTTCCTTAGATATATTTTAAT
TAATTGTTTTAAAGTACATTGATATTTATTAATCATTGGATTTGGGGAGCAGATTTTTGACTGT
GGCAGATGGTAAGGAACAGAACAGTAAATAGTTGGACGAGATCAATCAGGGCGAATTACATTTT
TTCTGTTACACTGGTGATCATTTGATAATTGATTTACCTCAGTGTTTAACAGTTTTTGTTTTGT
TTTAAAAATACTAACTAATTGTCAAGCACTGATAGAGATGCAGGTTTTGGTGGGTGTGGGTTGT
GAGGAAGATCTCACCTTACCAACTGCAGTGCATTTCTGTGTTTTTAACCCTCAGAGAACTCTCA
TTTTAGGGTACTTGAGGCTGACTTGCAAATTAACTAAAGTTTTAAGGTAACCTTTTTTCCATTG
TAAATATTTCTGTAAATACTACCAGTTGGATATTAGAACAGTAGGATACTTTTCTGAATCCAAT
CCTATTTTTATTTTATACAGTATTTCTCAGCTGTGATCTTTGGAGCAAAAGCCAACGGCAGGAA
AAAATAGTTTGTACCAGTTTCATGAAGTATGTCTTTGGGTTTTTGTAAATAATTTTAACTCAAA
TAAAATTGCTACTTTAAATACA

hide sequence

RefSeq Acc Id:

XM_006252725 ⟹ XP_006252787

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	16	10,011,741 - 10,081,472 (+)	NCBI
mRatBN7.2	16	10,005,520 - 10,075,270 (+)	NCBI
Rnor_6.0	16	11,029,325 - 11,108,867 (+)	NCBI
Rnor_5.0	16	9,354,539 - 9,434,346 (+)	NCBI

Sequence:

show sequence

GCCGGGAGCGCAAATGGCGTTGAGATGGTTCAGGGCCCTGTTCAAACTCCAGCGCTGACCATTC
ACCGGCGGAGGCGGCGGCGCAGGAGGCGGCGGCGGCTTAGCTGGGGCACGTAGCAGCCTCGGCA
CCGGCGGCGGCCGCCAGGGAGGCCTAGGCCCTGTCCGGCCGGCGCGCCCGAGGTGGGGAGGGAA
GTTGCGGGGCCGCCGCTCACCCCCCCCCCCCTCGACCGGGCTTCCTATTTACCGAAGCGGAGCG
GCGGACTGTGACGGCAGCACAGCCCCTCGCCTCTCTTGGCGCACCGGTCGGCACTGTTCTCTCG
CGCGGGGCTCCCGCGTCCGCCCGTGGGCCGTTGGGAGCGGGAGAGGCGGAGGCGGCCCGAGGCC
AAAGCACCCGCCAGGCGCCGAGGGGAATATGAAACAGGTGTCAAAATGACATCCAGATTTGGGA
AAACTTACAGTAGGAAAGGAGGAAATGGCAGTTCAAAATTTGATGAAGTTTTTTCCAACAAACG
GACTACTCTTAGTACAAAATGGGGAGAGACCACATTTATGGCTAAATTAGGGCAGAAGAGGCCC
AATTTCAAACCAGATATTCAAGAAATTCCGAAGAAACCTAAAGTAGAAGAAGAAGATACTGGAG
ATCCTTTTGGTTTTGATAGTGATGATGAGTCTCTACCTGTTTCTTCAAAAAGTTTAGCCCAGGG
TAAGGGTTCCTCTTACTCAGAATCCAGTGAAGCTGTTCAGCTGGAAGAAGTCACTTCAGTACTT
GAAGCTAATAGCAAATGTAGTCATGCGGTGGGTGAAGACAGTTTTGCTTCTGATAGATGCTTAC
TTGTGGAGGATTCTTTAATTGGGAAAGAAAAGAACACAAATAGAATTCCAGAAGACAATGCAAA
CAAAAGTAGTTGTACTAAGTTGATAACTTCAGATAAAGTGGAGAATTTTAGTGAAGAACATGAA
AAAAATAGTCACCATTTTCACAAGAATGCTGAAGATAGTACTAAGAAGCCCAATGCAGAGACTG
TAGCGGCTTCTGAATGTAAAGCTGATGAGACTAAAACAAGTGATACTTGGAATTCCCAGTCTGC
AAAAAGAACAGAGTCTCCATCTGAAAGTTGTCCAGTCAAAGGATCTGTAAGAACTGGTTTATAT
GAATGGGATAATGATTTTGAAGATATCAGATCAGAAGACTGTATTTTAAGTTTGGATAATGATT
CTCTTTTGGAGATGAAGGATGAGGATTTAAAAAATCGGATTGGAGGATTGGAAAATCTAAACGA
AGCCTTTGAAGAAGATATTATACAAAGTGTTCTTAGGCCAAGCAACTGTAGGACGTACTGTAGG
GCCAATAAAGCAAAATCCTCACAGGGAACGTCAAATTTTGATAAGCTAATGGATGGCACCAGTC
AGACCTTAGCCAAAGCAAACAGTGAATCAAGTAAAGATGGCCTGAATCAGGCAAAGAAAGGTAG
TGTAAGTTGTGGGACCAGTTTTAGAGGAACAGTTGGACGGACTAGAGATTACACTGTTTTACAT
CCATCTTGCTTGTCAGTTTGTAATGTTACCATCCAGGATACTATGGAAAGGAGTATGGATGAGT
TCACGGCGTCCACTCCTGCAGATTTAGGAGAAGCTGGCCGGCTCAGAAAAAAGGCAGATATTGC
AACTTCCAAGACCACTACTAGATTTCGACCTAGTAATACTAAGTCCAAAAAGGATGTTAAACTT
GAATTTTTTGGTTTTGAAGATCATGATGAGACAGGAGGTGATGAAGGGGGTTCTGGAAGTTCTA
ATTACAAAATTAAATATTTTGGCTTTGACGATCTCAGTGAAAGTGAAGATGATGACGATGATGA
CTGTCAAGTGGAAAGAAAGAAAGACAAAAAAAGAACTAAAACAGCTCCATCACCTTCCCAGCAG
CCTCCTCCTGAAAGCAGTGACAATTCCCAGGATAGTCAGTCTAGTACTAATAATGCAGAGGACT
TGCCTGGTGTGCCTGAGAGTGTGAAGAAGCCCATAAGTAAACAAGGAGATAAATCCAAGGAAAA
CACCAGAAAGATTTTTAGTGGCCCCAAACGGTCACCTACAAAAGCTGTATATAATGCCAGGCAT
TGGAACCATCCAGACTCACAGGAACTGCCTGGACCACCAATAGTAAAACCTCAGAGTGTCACAG
TGAGGCTGTCTTCAAAGGAACCAAATCAAAAAGATGATGGAGTTTTTAAGGCTCCTGCACCACC
ACTCAAAGTGATAAAAACTGTGACAATACCTACTCAGCCCTACCAAGAAATAGTTACTGCACTG
AAATGCAGAAAAGAAGACAAAGAATTATATACTGTTGTTCAGCACGTGAAGCACTTCAATGATG
TGGTGGAGTTTGGTGAAAATCAAGAGTTCACTGATGACATTGAATACTTGTTAAGTGGCTTAAA
GAGTACTCAGCCTCTAAACACACGTTGCCTTAGTGTTATCAGCTTGGCTACTAAATGTGCCATG
CCCAGTTTTCGAATGCATCTGAGAGCACATGGGATGGTTGCAATGGTCTTTAAAACTCTAGATG
ATTCCCAGCACCATCAGAATCTGTCCCTCTGTACAGCTGCTCTCATGTACATATTGAGTAGAGA
TCGTTTGAACATGGATCTTGATAGGGCCAGCCTAGATCTCATGATTCGGCTTTTGGAACTGGAA
CAAGATGCTTCTTCAGCTAAGCTACTGAATGAAAAAGACATGAACAAGATCAAAGAAAAAATCC
GAAGACTCTGCGAAACCGTGCACAATAAGCATCTTGATCTAGAGAATATAACGACTGGTCATTT
AGCTATGGAGACATTGCTCTCCCTCACTTCCAAACGAGCAGGAGATTGGTTTAAAGAAGAGCTC
CGGCTTCTGGGTGGTCTGGATCATATTGTAGATAAAGTAAAAGAGTGTGTGGATCATTTAAGTA
GAGATGAGGATGAAGAGAAACTAGTAGCCTCATTATGGGGAGCAGAAAGATGTTTACGAGTTCT
GGAGAGTGTAACAGTGCATAATCCAGAGAATCAAAGCTACTTGATAGCCTATAAAGATTCACAA
CTCATTATTTCATCAGCTAAAGCATTACAGCATTGTGAAGACCTGATTCAGCAGTATAACCGCG
CTGAGAACAGCATCTGTATAGCAGACAGTAAACCTCTGCCTTACCAGAATGTAACTAACCATGT
GGGCAAAGCAGTGGAGGACTGCATGAGGGCGATCATTGGGGTATTGCTCAATTTAACTAATGAT
AATGAGTGGGGCAGCACAAAGACAGGAGAACAAGAAGGACTCATAGGCACAGCGATGAACTGTG
TCCTTCAGGTTCCAAAGTACCTACCTCAGGAGCAGAGATTTGATATCCGAGTGCTGGGATTGGG
TCTACTGATCAATCTGGTGGAGTATAGTGCCCGGAATCGACACTGCCTTGTCAACATGGAAACA
TCCTGTTCCTTTGATTCCTCCTTCTCTAGTGGAGAAGGAGATCATAATTTAAGGCTAGCTGGAC
AAGTTCATGCTGTTCAGGCTTTAGTACAGCTATTTCTCGAACGAGAAAGAGCGGCGCAGTTGGC
AGAAAGTAAAACAGATGAGTTGATCAAAGATGCTCCCACCACCCAGCACGATAAGAGTGGAGAG
TGGCAGGAAACAAGTGGAGAGATACAGTGGGTGTCGACGGAAAAGACTGATGGTGCTGAGGAGA
AGCAGAAGAAGGAAGATGAGGATGAAGAACTTGACCTCAATAAAGCCCTTCAGCATGCTGGCAA
ACACATGGAAGACTGCATCGTAGCCTCTTACACAGCCCTGCTTCTTGGGTGTCTCTGCCAGGAA
AGTCCAATCAATGTAACTACAGTAAGAGAATATCTTCCAGAAGGAGATTTCTCCATAATGACAG
AGATGCTTAAAAAATTCTTAAGCTTCATGAATCTTACCTGTGCTGTTGGAACAACAGGCCAGAA
GTCTATCTCTAGAGTGATTGAGTATTTGGAACACTGCTAGCTGCTTTACCTTTGCTTCAGGTGC
TTGGTAATGCTGGAGCTCTCCTTAGACAGAGAACAGACAGGAAAGAAGTCCTGGAAGACAAACC
AAGAACGTTCATCAGTATCATTCGTGTTTGGATTTTTATGATCACCTGATTTCTTCATCATGCA
TTCTGCATTTGCTAAATGACAGTTACTACATCAATCTGCAGCTATCAAAAATGAGGGAAAAGGT
TCAGGCTGTTAACAGTCCCATGCAGTATTTAAATACACTTACTTGGCAGAGTCTATGCCCTCCC
CTTCTTTCCTTGCTTTGTTTCAGGCAAGGGTTAAAGGGGGAAATTGTGCTGCTGTTAGTGCAAC
TGCTGTGTATGTTGAGCCACTGTTGTCATGCCAGTCAGGTGCAAGGCAGCCTAGCTACTGAGCT
GTTGAGTGTCCGAGGACATTCGAGACAGCAGCTTAGGTCCTTTTTCAGGCTCATTTGCTTTTGC
TTTTTGTTGAATGATTCCAATCGTAAATAAAGCTTTTAATAATTTTGTGAATTTTTTTTGGTTG
TTGTTCCCTGAACTACTGTCTATATTTAAAATTAGATGGAATCCAAAGACACAAGGGATTAATA
GTATATTTTTTTATTCTTGATTAGGTTTGGGTGTTGAACTATTTTTCACTTCTGAGACCATGAC
CATATTCAATGTCATACCATTATGTGTCATAGCTATAGGCACAAGAAAACAAATAGCAGTTTGA
GGGAATATTATATTATATAAGATAATGTGCCCTGTTAAAGGATTAAGCAAAAATAGACAAACCC
AGGGTAGTTTACACTTAATGCTAGGGAGGCTCTTGAAACATTGTTAAGTTTTGAGGGAAGTTCT
CTAGATATATTTTCTAATGTTCAGTACAGTAAAATATAAGGAAGCTAAAACACCAATGTGGAAT
TCATTTTTCCAGATAGCGTGTATATTCTTCTATAGAGTGACAGGATCAATTGCATATGCGCAAA
GCCTTAAAATTGCAGGTGTAGAGAAGACCCTTTTTATTCACATCCTATGTTCATAGAGCAATTG
TTTAGACAATGATTGTGGAACACACAGAACATGGTTTATAGGTTAAATTTCATAGTTTTTTTTT
TCTTTTTTTCCTGTATTGTTCAGACCACTGGTTATACATTTCCCCCTTTTTATTAATCTGCCTG
AGGACAGACAGGCTTTCCAGAGATGTTTCATTAATACTTTTAATTACCTTTCAGGTAGTTCCAT
CATGTTTCTTCATTGGATTTGTAAAACTTGAAGCCATAAAAATATTAGTTTGGTGTGTATTGGG
GAAAATAGCTGAAAGTCTAATTTTGACTCATTTTAGACTTTGTTATTTCCTTGTATAAAGTAAC
AAACCGGGGCTCTTGTATCAGTGCCATCTGTAATGTTTTTAAATGCAGTGGCTGCCTTCTATTG
TCTTCCTATTTTTGATAATGCAGATTGTTGGGAAATCTATAAGGAAGTAACTGACTCTAGGCAA
ATTGTTTTCTTCCTTCTACCCACCCAAACCCTACCCATCACCTTTTTGGAACACAGTATGCCAG
TGTAATGTGGGAACCATTGAGACTGTATTTGCCCTGAGTACCAAACTAATTTAGTGAACTTTTT
TCTTTTAAAGCATACTGGTAAATGATGTCCACAAATTTCCTTAGATATATTTTAATTAATTGTT
TTAAAGTACATTGATATTTATTAATCATTGGATTTGGGGAGCAGATTTTTGACTGTGGCAGATG
GTAAGGAACAGAACAGTAAATAGTTGGACGAGATCAATCAGGGCGAATTACATTTTTTCTGTTA
CACTGGTGATCATTTGATAATTGATTTACCTCAGTGTTTAACAGTTTTTGTTTTGTTTTAAAAA
TACTAACTAATTGTCAAGCACTGATAGAGATGCAGGTTTTGGTGGGTGTGGGTTGTGAGGAAGA
TCTCACCTTACCAACTGCAGTGCATTTCTGTGTTTTTAACCCTCAGAGAACTCTCATTTTAGGG
TACTTGAGGCTGACTTGCAAATTAACTAAAGTTTTAAGGTAACCTTTTTTCCATTGTAAATATT
TCTGTAAATACTACCAGTTGGATATTAGAACAGTAGGATACTTTTCTGAATCCAATCCTATTTT
TATTTTATACAGTATTTCTCAGCTGTGATCTTTGGAGCAAAAGCCAACGGCAGGAAAAAATAGT
TTGTACCAGTTTCATGAAGTATGTCTTTGGGTTTTTGTAAATAATTTTAACTCAAATAAAATTG
CTACTTTAAATACA

hide sequence

RefSeq Acc Id:

XM_006252726 ⟹ XP_006252788

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	16	10,011,741 - 10,081,472 (+)	NCBI
mRatBN7.2	16	10,005,520 - 10,075,270 (+)	NCBI
Rnor_6.0	16	11,029,325 - 11,108,867 (+)	NCBI
Rnor_5.0	16	9,354,539 - 9,434,346 (+)	NCBI

Sequence:

show sequence

GCCGGGAGCGCAAATGGCGTTGAGATGGTTCAGGGCCCTGTTCAAACTCCAGCGCTGACCATTC
ACCGGCGGAGGCGGCGGCGCAGGAGGCGGCGGCGGCTTAGCTGGGGCACGTAGCAGCCTCGGCA
CCGGCGGCGGCCGCCAGGGAGGCCTAGGCCCTGTCCGGCCGGCGCGCCCGAGGTGGGGAGGGAA
GTTGCGGGGCCGCCGCTCACCCCCCCCCCCCTCGACCGGGCTTCCTATTTACCGAAGCGGAGCG
GCGGACTGTGACGGCAGCACAGCCCCTCGCCTCTCTTGGCGCACCGGTCGGCACTGTTCTCTCG
CGCGGGGCTCCCGCGTCCGCCCGTGGGCCGTTGGGAGCGGGAGAGGCGGAGGCGGCCCGAGGCC
AAAGCACCCGCCAGGCGCCGAGGGGAATATGAAACAGGTGTCAAAATGACATCCAGATTTGGGA
AAACTTACAGTAGGAAAGGAGGAAATGGCAGTTCAAAATTTGATGAAGTTTTTTCCAACAAACG
GACTACTCTTAGTACAAAATGGGGAGAGACCACATTTATGGCTAAATTAGGGCAGAAGAGGCCC
AATTTCAAACCAGATATTCAAGAAATTCCGAAGAAACCTAAAGTAGAAGAAGAAGATACTGGAG
ATCCTTTTGGTTTTGATAGTGATGATGAGTCTCTACCTGTTTCTTCAAAAAGTTTAGCCCAGGG
TAAGGGTTCCTCTTACTCAGAATCCAGTGAAGCTGTTCAGCTGGAAGAAGTCACTTCAGTACTT
GAAGCTAATAGCAAATGTAGTCATGCGGTGGGTGAAGACAGTTTTGCTTCTGATAGATGCTTAC
TTGTGGAGGATTCTTTAATTGGGAAAGAAAAGAACACAAATAGAATTCCAGAAGACAATGCAAA
CAAAAGTAGTTGTACTAAGTTGATAACTTCAGATAAAGTGGAGAATTTTAGTGAAGAACATGAA
AAAAATAGTCACCATTTTCACAAGAATGCTGAAGATAGTACTAAGAAGCCCAATGCAGAGACTG
TAGCGGCTTCTGAATGTAAAGCTGATGAGACTAAAACAAGTGATACTTGGAATTCCCAGTCTGC
AAAAAGAACAGAGTCTCCATCTGAAAGTTGTCCAGTCAAAGGATCTGTAAGAACTGGTTTATAT
GAATGGGATAATGATTTTGAAGATATCAGATCAGAAGACTGTATTTTAAGTTTGGATAATGATT
CTCTTTTGGAGATGAAGGATGAGGATTTAAAAAATCGGATTGGAGGATTGGAAAATCTAAACGA
AGCCTTTGAAGAAGATATTATACAAAGTGTTCTTAGGCCAAGCAACTGTAGGACGTACTGTAGG
GCCAATAAAGCAAAATCCTCACAGGGAACGTCAAATTTTGATAAGCTAATGGATGGCACCAGTC
AGACCTTAGCCAAAGCAAACAGTGAATCAAGTAAAGATGGCCTGAATCAGGCAAAGAAAGGTAG
TGTAAGTTGTGGGACCAGTTTTAGAGGAACAGTTGGACGGACTAGAGATTACACTGTTTTACAT
CCATCTTGCTTGTCAGTTTGTAATGTTACCATCCAGGATACTATGGAAAGGAGTATGGATGAGT
TCACGGCGTCCACTCCTGCAGATTTAGGAGAAGCTGGCCGGCTCAGAAAAAAGGCAGATATTGC
AACTTCCAAGACCACTACTAGATTTCGACCTAGTAATACTAAGTCCAAAAAGGATGTTAAACTT
GAATTTTTTGGTTTTGAAGATCATGATGAGACAGGAGGTGATGAAGGGGGTTCTGGAAGTTCTA
ATTACAAAATTAAATATTTTGGCTTTGACGATCTCAGTGAAAGTGAAGATGATGACGATGATGA
CTGTCAAGTGGAAAGAAAGAAAGACAAAAAAAGAACTAAAACAGCTCCATCACCTTCCCAGCAG
CCTCCTCCTGAAAGCAGTGACAATTCCCAGGATAGTCAGTCTAGTACTAATAATGCAGAAAACT
TGGATTTTACAGAGGACTTGCCTGGTGTGCCTGAGAGTGTGAAGAAGCCCATAAGTAAACAAGG
AGATAAATCCAAGGAAAACACCAGAAAGATTTTTAGTGGCCCCAAACGGTCACCTACAAAAGCT
GTATATAATGCCAGGCATTGGAACCATCCAGACTCACAGGAACTGCCTGGACCACCAATAGTAA
AACCTCAGAGTGTCACATTATATACTGTTGTTCAGCACGTGAAGCACTTCAATGATGTGGTGGA
GTTTGGTGAAAATCAAGAGTTCACTGATGACATTGAATACTTGTTAAGTGGCTTAAAGAGTACT
CAGCCTCTAAACACACGTTGCCTTAGTGTTATCAGCTTGGCTACTAAATGTGCCATGCCCAGTT
TTCGAATGCATCTGAGAGCACATGGGATGGTTGCAATGGTCTTTAAAACTCTAGATGATTCCCA
GCACCATCAGAATCTGTCCCTCTGTACAGCTGCTCTCATGTACATATTGAGTAGAGATCGTTTG
AACATGGATCTTGATAGGGCCAGCCTAGATCTCATGATTCGGCTTTTGGAACTGGAACAAGATG
CTTCTTCAGCTAAGCTACTGAATGAAAAAGACATGAACAAGATCAAAGAAAAAATCCGAAGACT
CTGCGAAACCGTGCACAATAAGCATCTTGATCTAGAGAATATAACGACTGGTCATTTAGCTATG
GAGACATTGCTCTCCCTCACTTCCAAACGAGCAGGAGATTGGTTTAAAGAAGAGCTCCGGCTTC
TGGGTGGTCTGGATCATATTGTAGATAAAGTAAAAGAGTGTGTGGATCATTTAAGTAGAGATGA
GGATGAAGAGAAACTAGTAGCCTCATTATGGGGAGCAGAAAGATGTTTACGAGTTCTGGAGAGT
GTAACAGTGCATAATCCAGAGAATCAAAGCTACTTGATAGCCTATAAAGATTCACAACTCATTA
TTTCATCAGCTAAAGCATTACAGCATTGTGAAGACCTGATTCAGCAGTATAACCGCGCTGAGAA
CAGCATCTGTATAGCAGACAGTAAACCTCTGCCTTACCAGAATGTAACTAACCATGTGGGCAAA
GCAGTGGAGGACTGCATGAGGGCGATCATTGGGGTATTGCTCAATTTAACTAATGATAATGAGT
GGGGCAGCACAAAGACAGGAGAACAAGAAGGACTCATAGGCACAGCGATGAACTGTGTCCTTCA
GGTTCCAAAGTACCTACCTCAGGAGCAGAGATTTGATATCCGAGTGCTGGGATTGGGTCTACTG
ATCAATCTGGTGGAGTATAGTGCCCGGAATCGACACTGCCTTGTCAACATGGAAACATCCTGTT
CCTTTGATTCCTCCTTCTCTAGTGGAGAAGGAGATCATAATTTAAGGCTAGCTGGACAAGTTCA
TGCTGTTCAGGCTTTAGTACAGCTATTTCTCGAACGAGAAAGAGCGGCGCAGTTGGCAGAAAGT
AAAACAGATGAGTTGATCAAAGATGCTCCCACCACCCAGCACGATAAGAGTGGAGAGTGGCAGG
AAACAAGTGGAGAGATACAGTGGGTGTCGACGGAAAAGACTGATGGTGCTGAGGAGAAGCAGAA
GAAGGAAGATGAGGATGAAGAACTTGACCTCAATAAAGCCCTTCAGCATGCTGGCAAACACATG
GAAGACTGCATCGTAGCCTCTTACACAGCCCTGCTTCTTGGGTGTCTCTGCCAGGAAAGTCCAA
TCAATGTAACTACAGTAAGAGAATATCTTCCAGAAGGAGATTTCTCCATAATGACAGAGATGCT
TAAAAAATTCTTAAGCTTCATGAATCTTACCTGTGCTGTTGGAACAACAGGCCAGAAGTCTATC
TCTAGAGTGATTGAGTATTTGGAACACTGCTAGCTGCTTTACCTTTGCTTCAGGTGCTTGGTAA
TGCTGGAGCTCTCCTTAGACAGAGAACAGACAGGAAAGAAGTCCTGGAAGACAAACCAAGAACG
TTCATCAGTATCATTCGTGTTTGGATTTTTATGATCACCTGATTTCTTCATCATGCATTCTGCA
TTTGCTAAATGACAGTTACTACATCAATCTGCAGCTATCAAAAATGAGGGAAAAGGTTCAGGCT
GTTAACAGTCCCATGCAGTATTTAAATACACTTACTTGGCAGAGTCTATGCCCTCCCCTTCTTT
CCTTGCTTTGTTTCAGGCAAGGGTTAAAGGGGGAAATTGTGCTGCTGTTAGTGCAACTGCTGTG
TATGTTGAGCCACTGTTGTCATGCCAGTCAGGTGCAAGGCAGCCTAGCTACTGAGCTGTTGAGT
GTCCGAGGACATTCGAGACAGCAGCTTAGGTCCTTTTTCAGGCTCATTTGCTTTTGCTTTTTGT
TGAATGATTCCAATCGTAAATAAAGCTTTTAATAATTTTGTGAATTTTTTTTGGTTGTTGTTCC
CTGAACTACTGTCTATATTTAAAATTAGATGGAATCCAAAGACACAAGGGATTAATAGTATATT
TTTTTATTCTTGATTAGGTTTGGGTGTTGAACTATTTTTCACTTCTGAGACCATGACCATATTC
AATGTCATACCATTATGTGTCATAGCTATAGGCACAAGAAAACAAATAGCAGTTTGAGGGAATA
TTATATTATATAAGATAATGTGCCCTGTTAAAGGATTAAGCAAAAATAGACAAACCCAGGGTAG
TTTACACTTAATGCTAGGGAGGCTCTTGAAACATTGTTAAGTTTTGAGGGAAGTTCTCTAGATA
TATTTTCTAATGTTCAGTACAGTAAAATATAAGGAAGCTAAAACACCAATGTGGAATTCATTTT
TCCAGATAGCGTGTATATTCTTCTATAGAGTGACAGGATCAATTGCATATGCGCAAAGCCTTAA
AATTGCAGGTGTAGAGAAGACCCTTTTTATTCACATCCTATGTTCATAGAGCAATTGTTTAGAC
AATGATTGTGGAACACACAGAACATGGTTTATAGGTTAAATTTCATAGTTTTTTTTTTCTTTTT
TTCCTGTATTGTTCAGACCACTGGTTATACATTTCCCCCTTTTTATTAATCTGCCTGAGGACAG
ACAGGCTTTCCAGAGATGTTTCATTAATACTTTTAATTACCTTTCAGGTAGTTCCATCATGTTT
CTTCATTGGATTTGTAAAACTTGAAGCCATAAAAATATTAGTTTGGTGTGTATTGGGGAAAATA
GCTGAAAGTCTAATTTTGACTCATTTTAGACTTTGTTATTTCCTTGTATAAAGTAACAAACCGG
GGCTCTTGTATCAGTGCCATCTGTAATGTTTTTAAATGCAGTGGCTGCCTTCTATTGTCTTCCT
ATTTTTGATAATGCAGATTGTTGGGAAATCTATAAGGAAGTAACTGACTCTAGGCAAATTGTTT
TCTTCCTTCTACCCACCCAAACCCTACCCATCACCTTTTTGGAACACAGTATGCCAGTGTAATG
TGGGAACCATTGAGACTGTATTTGCCCTGAGTACCAAACTAATTTAGTGAACTTTTTTCTTTTA
AAGCATACTGGTAAATGATGTCCACAAATTTCCTTAGATATATTTTAATTAATTGTTTTAAAGT
ACATTGATATTTATTAATCATTGGATTTGGGGAGCAGATTTTTGACTGTGGCAGATGGTAAGGA
ACAGAACAGTAAATAGTTGGACGAGATCAATCAGGGCGAATTACATTTTTTCTGTTACACTGGT
GATCATTTGATAATTGATTTACCTCAGTGTTTAACAGTTTTTGTTTTGTTTTAAAAATACTAAC
TAATTGTCAAGCACTGATAGAGATGCAGGTTTTGGTGGGTGTGGGTTGTGAGGAAGATCTCACC
TTACCAACTGCAGTGCATTTCTGTGTTTTTAACCCTCAGAGAACTCTCATTTTAGGGTACTTGA
GGCTGACTTGCAAATTAACTAAAGTTTTAAGGTAACCTTTTTTCCATTGTAAATATTTCTGTAA
ATACTACCAGTTGGATATTAGAACAGTAGGATACTTTTCTGAATCCAATCCTATTTTTATTTTA
TACAGTATTTCTCAGCTGTGATCTTTGGAGCAAAAGCCAACGGCAGGAAAAAATAGTTTGTACC
AGTTTCATGAAGTATGTCTTTGGGTTTTTGTAAATAATTTTAACTCAAATAAAATTGCTACTTT
AAATACA

hide sequence

RefSeq Acc Id:

XM_063275139 ⟹ XP_063131209

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	16	10,011,741 - 10,081,472 (+)	NCBI

Protein Sequences


Protein RefSeqs	NP_001414208	(Get FASTA)	NCBI Sequence Viewer
	XP_006252786	(Get FASTA)	NCBI Sequence Viewer
	XP_006252787	(Get FASTA)	NCBI Sequence Viewer
	XP_006252788	(Get FASTA)	NCBI Sequence Viewer
	XP_063131209	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSRNOP00000070173
	ENSRNOP00000070173.2
	ENSRNOP00000083400
	ENSRNOP00000083400.1

RefSeq Acc Id:	XP_006252788 ⟸ XM_006252726
- Peptide Label:	isoform X3
- UniProtKB:	A0A8I5ZZX5 (UniProtKB/TrEMBL)
- Sequence:	show sequence MTSRFGKTYSRKGGNGSSKFDEVFSNKRTTLSTKWGETTFMAKLGQKRPNFKPDIQEIPKKPKV EEEDTGDPFGFDSDDESLPVSSKSLAQGKGSSYSESSEAVQLEEVTSVLEANSKCSHAVGEDSF ASDRCLLVEDSLIGKEKNTNRIPEDNANKSSCTKLITSDKVENFSEEHEKNSHHFHKNAEDSTK KPNAETVAASECKADETKTSDTWNSQSAKRTESPSESCPVKGSVRTGLYEWDNDFEDIRSEDCI LSLDNDSLLEMKDEDLKNRIGGLENLNEAFEEDIIQSVLRPSNCRTYCRANKAKSSQGTSNFDK LMDGTSQTLAKANSESSKDGLNQAKKGSVSCGTSFRGTVGRTRDYTVLHPSCLSVCNVTIQDTM ERSMDEFTASTPADLGEAGRLRKKADIATSKTTTRFRPSNTKSKKDVKLEFFGFEDHDETGGDE GGSGSSNYKIKYFGFDDLSESEDDDDDDCQVERKKDKKRTKTAPSPSQQPPPESSDNSQDSQSS TNNAENLDFTEDLPGVPESVKKPISKQGDKSKENTRKIFSGPKRSPTKAVYNARHWNHPDSQEL PGPPIVKPQSVTLYTVVQHVKHFNDVVEFGENQEFTDDIEYLLSGLKSTQPLNTRCLSVISLAT KCAMPSFRMHLRAHGMVAMVFKTLDDSQHHQNLSLCTAALMYILSRDRLNMDLDRASLDLMIRL LELEQDASSAKLLNEKDMNKIKEKIRRLCETVHNKHLDLENITTGHLAMETLLSLTSKRAGDWF KEELRLLGGLDHIVDKVKECVDHLSRDEDEEKLVASLWGAERCLRVLESVTVHNPENQSYLIAY KDSQLIISSAKALQHCEDLIQQYNRAENSICIADSKPLPYQNVTNHVGKAVEDCMRAIIGVLLN LTNDNEWGSTKTGEQEGLIGTAMNCVLQVPKYLPQEQRFDIRVLGLGLLINLVEYSARNRHCLV NMETSCSFDSSFSSGEGDHNLRLAGQVHAVQALVQLFLERERAAQLAESKTDELIKDAPTTQHD KSGEWQETSGEIQWVSTEKTDGAEEKQKKEDEDEELDLNKALQHAGKHMEDCIVASYTALLLGC LCQESPINVTTVREYLPEGDFSIMTEMLKKFLSFMNLTCAVGTTGQKSISRVIEYLEHC hide sequence

RefSeq Acc Id:

XP_006252787 ⟸ XM_006252725

- Peptide Label:

isoform X2

- Sequence:

show sequence

MTSRFGKTYSRKGGNGSSKFDEVFSNKRTTLSTKWGETTFMAKLGQKRPNFKPDIQEIPKKPKV
EEEDTGDPFGFDSDDESLPVSSKSLAQGKGSSYSESSEAVQLEEVTSVLEANSKCSHAVGEDSF
ASDRCLLVEDSLIGKEKNTNRIPEDNANKSSCTKLITSDKVENFSEEHEKNSHHFHKNAEDSTK
KPNAETVAASECKADETKTSDTWNSQSAKRTESPSESCPVKGSVRTGLYEWDNDFEDIRSEDCI
LSLDNDSLLEMKDEDLKNRIGGLENLNEAFEEDIIQSVLRPSNCRTYCRANKAKSSQGTSNFDK
LMDGTSQTLAKANSESSKDGLNQAKKGSVSCGTSFRGTVGRTRDYTVLHPSCLSVCNVTIQDTM
ERSMDEFTASTPADLGEAGRLRKKADIATSKTTTRFRPSNTKSKKDVKLEFFGFEDHDETGGDE
GGSGSSNYKIKYFGFDDLSESEDDDDDDCQVERKKDKKRTKTAPSPSQQPPPESSDNSQDSQSS
TNNAEDLPGVPESVKKPISKQGDKSKENTRKIFSGPKRSPTKAVYNARHWNHPDSQELPGPPIV
KPQSVTVRLSSKEPNQKDDGVFKAPAPPLKVIKTVTIPTQPYQEIVTALKCRKEDKELYTVVQH
VKHFNDVVEFGENQEFTDDIEYLLSGLKSTQPLNTRCLSVISLATKCAMPSFRMHLRAHGMVAM
VFKTLDDSQHHQNLSLCTAALMYILSRDRLNMDLDRASLDLMIRLLELEQDASSAKLLNEKDMN
KIKEKIRRLCETVHNKHLDLENITTGHLAMETLLSLTSKRAGDWFKEELRLLGGLDHIVDKVKE
CVDHLSRDEDEEKLVASLWGAERCLRVLESVTVHNPENQSYLIAYKDSQLIISSAKALQHCEDL
IQQYNRAENSICIADSKPLPYQNVTNHVGKAVEDCMRAIIGVLLNLTNDNEWGSTKTGEQEGLI
GTAMNCVLQVPKYLPQEQRFDIRVLGLGLLINLVEYSARNRHCLVNMETSCSFDSSFSSGEGDH
NLRLAGQVHAVQALVQLFLERERAAQLAESKTDELIKDAPTTQHDKSGEWQETSGEIQWVSTEK
TDGAEEKQKKEDEDEELDLNKALQHAGKHMEDCIVASYTALLLGCLCQESPINVTTVREYLPEG
DFSIMTEMLKKFLSFMNLTCAVGTTGQKSISRVIEYLEHC

hide sequence

RefSeq Acc Id:	XP_006252786 ⟸ XM_006252724
- Peptide Label:	isoform X1
- UniProtKB:	D4ADT3 (UniProtKB/TrEMBL)
- Sequence:	show sequence MTSRFGKTYSRKGGNGSSKFDEVFSNKRTTLSTKWGETTFMAKLGQKRPNFKPDIQEIPKKPKV EEEDTGDPFGFDSDDESLPVSSKSLAQGKGSSYSESSEAVQLEEVTSVLEANSKCSHAVGEDSF ASDRCLLVEDSLIGKEKNTNRIPEDNANKSSCTKLITSDKVENFSEEHEKNSHHFHKNAEDSTK KPNAETVAASECKADETKTSDTWNSQSAKRTESPSESCPVKGSVRTGLYEWDNDFEDIRSEDCI LSLDNDSLLEMKDEDLKNRIGGLENLNEAFEEDIIQSVLRPSNCRTYCRANKAKSSQGTSNFDK LMDGTSQTLAKANSESSKDGLNQAKKGSVSCGTSFRGTVGRTRDYTVLHPSCLSVCNVTIQDTM ERSMDEFTASTPADLGEAGRLRKKADIATSKTTTRFRPSNTKSKKDVKLEFFGFEDHDETGGDE GGSGSSNYKIKYFGFDDLSESEDDDDDDCQVERKKDKKRTKTAPSPSQQPPPESSDNSQDSQSS TNNAENLDFTEDLPGVPESVKKPISKQGDKSKENTRKIFSGPKRSPTKAVYNARHWNHPDSQEL PGPPIVKPQSVTVRLSSKEPNQKDDGVFKAPAPPLKVIKTVTIPTQPYQEIVTALKCRKEDKEL YTVVQHVKHFNDVVEFGENQEFTDDIEYLLSGLKSTQPLNTRCLSVISLATKCAMPSFRMHLRA HGMVAMVFKTLDDSQHHQNLSLCTAALMYILSRDRLNMDLDRASLDLMIRLLELEQDASSAKLL NEKDMNKIKEKIRRLCETVHNKHLDLENITTGHLAMETLLSLTSKRAGDWFKEELRLLGGLDHI VDKVKECVDHLSRDEDEEKLVASLWGAERCLRVLESVTVHNPENQSYLIAYKDSQLIISSAKAL QHCEDLIQQYNRAENSICIADSKPLPYQNVTNHVGKAVEDCMRAIIGVLLNLTNDNEWGSTKTG EQEGLIGTAMNCVLQVPKYLPQEQRFDIRVLGLGLLINLVEYSARNRHCLVNMETSCSFDSSFS SGEGDHNLRLAGQVHAVQALVQLFLERERAAQLAESKTDELIKDAPTTQHDKSGEWQETSGEIQ WVSTEKTDGAEEKQKKEDEDEELDLNKALQHAGKHMEDCIVASYTALLLGCLCQESPINVTTVR EYLPEGDFSIMTEMLKKFLSFMNLTCAVGTTGQKSISRVIEYLEHC hide sequence

Ensembl Acc Id:

ENSRNOP00000070173 ⟸ ENSRNOT00000078390

Ensembl Acc Id:

ENSRNOP00000083400 ⟸ ENSRNOT00000094342

RefSeq Acc Id:	XP_063131209 ⟸ XM_063275139
- Peptide Label:	isoform X4

RefSeq Acc Id:	NP_001414208 ⟸ NM_001427279
- UniProtKB:	D4ADT3 (UniProtKB/TrEMBL)

Protein Domains

WAPL

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-D4ADT3-F1-model_v2	AlphaFold	D4ADT3	1-1198	view protein structure

Transcriptome

eQTL		View at Phenogen
WGCNA		View at Phenogen
Tissue/Strain Expression		View at Phenogen

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	RGD:1590924	AgrOrtholog
BioCyc Gene	G2FUF-12053	BioCyc
Ensembl Genes	ENSRNOG00000052513	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSRNOT00000078390	ENTREZGENE
	ENSRNOT00000078390.2	UniProtKB/TrEMBL
	ENSRNOT00000094342	ENTREZGENE
	ENSRNOT00000094342.1	UniProtKB/TrEMBL
Gene3D-CATH	1.25.10.10	UniProtKB/TrEMBL
InterPro	ARM-like	UniProtKB/TrEMBL
	ARM-type_fold	UniProtKB/TrEMBL
	WAPL	UniProtKB/TrEMBL
	WAPL_metazoan_plants	UniProtKB/TrEMBL
	WAPL_prot	UniProtKB/TrEMBL
NCBI Gene	290577	ENTREZGENE
PANTHER	PTHR22100	UniProtKB/TrEMBL
	WINGS APART-LIKE PROTEIN HOMOLOG	UniProtKB/TrEMBL
Pfam	WAPL	UniProtKB/TrEMBL
PhenoGen	Wapl	PhenoGen
PROSITE	WAPL	UniProtKB/TrEMBL
RatGTEx	ENSRNOG00000052513	RatGTEx
Superfamily-SCOP	ARM-type_fold	UniProtKB/TrEMBL
UniProt	A0A8I5ZZX5	ENTREZGENE, UniProtKB/TrEMBL
	D4ADT3	ENTREZGENE, UniProtKB/TrEMBL

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2015-08-13	Wapl	WAPL cohesin release factor	Wapal	wings apart-like homolog (Drosophila)	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2012-09-17	Wapal	wings apart-like homolog (Drosophila)	LOC290577	hypothetical LOC290577	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2009-06-15	LOC290577	hypothetical LOC290577	RGD1308960	similar to parallel sister chromatids protein (84.3 kD) (4F208)	Data merged from RGD:1308960	1643240	APPROVED
2008-04-30	RGD1308960	similar to parallel sister chromatids protein (84.3 kD) (4F208)	RGD1308960_predicted	similar to parallel sister chromatids protein (84.3 kD) (4F208) (predicted)	'predicted' is removed	2292626	APPROVED
2006-11-20	LOC290577	hypothetical LOC290577			Symbol and Name status set to provisional	70820	PROVISIONAL
2005-01-20	RGD1308960_predicted	similar to parallel sister chromatids protein (84.3 kD) (4F208) (predicted)	LOC290578_predicted		Symbol and Name status set to approved	1331353	APPROVED
2005-01-12	LOC290578_predicted	similar to parallel sister chromatids protein (84.3 kD) (4F208) (predicted)			Symbol and Name status set to provisional	70820	PROVISIONAL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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Imported Disease Annotations - ClinVar