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ONTOLOGY REPORT - ANNOTATIONS

Term:chromosome organization involved in meiotic cell cycle
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Accession:GO:0070192 term browser browse the term
Definition:A process of chromosome organization that is involved in a meiotic cell cycle.
Synonyms:exact_synonym: chromosome organisation involved in meiosis;   meiotic chromosome organization


show annotations for term's descendants           Sort by:
chromosome organization involved in meiotic cell cycle term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atm ATM serine/threonine kinase acts_upstream_of_or_within ISO MGI:1926343 (MGI:83357|PMID:8843194) RGD PMID:8843194 MGI:83357 NCBI chr 8:53,828,741...53,932,773
Ensembl chr 8:53,831,093...53,932,437 		JBrowse link
G Atrx ATRX, chromatin remodeler acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:3052396|PMID:15242786)
GO_REF:0000107		 RGD
Ensembl		 PMID:15242786 GO_REF:0000107 MGI:3052396 NCBI chr  X:70,850,981...70,997,330
Ensembl chr  X:70,850,981...70,997,330 		JBrowse link
G Ccne1 cyclin E1 acts_upstream_of_or_within ISO MGI:1329034 (MGI:5698037|PMID:24586195) RGD PMID:24586195 MGI:5698037 NCBI chr 1:90,781,947...90,791,188
Ensembl chr 1:90,781,949...90,791,101 		JBrowse link
G Ccne2 cyclin E2 acts_upstream_of_or_within ISO MGI:88316 (MGI:5698037|PMID:24586195) RGD PMID:24586195 MGI:5698037 NCBI chr 5:24,285,078...24,298,258
Ensembl chr 5:24,284,922...24,297,632 		JBrowse link
G Dmc1 DNA meiotic recombinase 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 7:111,124,888...111,167,465
Ensembl chr 7:111,124,888...111,167,952 		JBrowse link
G Haspin histone H3 associated protein kinase involved_in ISO (MGI:5634589|PMID:25645018) RGD PMID:25645018 MGI:5634589 NCBI chr10:57,747,731...57,750,518
Ensembl chr10:57,747,573...57,750,512 		JBrowse link
G Meioc meiosis specific with coiled-coil domain involved_in ISO (MGI:5905073|PMID:28380054) RGD PMID:28380054 MGI:5905073 NCBI chr10:87,628,807...87,646,485
Ensembl chr10:87,628,875...87,646,752 		JBrowse link
G Rad50 RAD50 double strand break repair protein involved_in
acts_upstream_of_or_within		 IBA
ISO		 PMID:21873635
MGI:2387852 (MGI:3831647|PMID:19001091)		 RGD PMID:19001091 PMID:21873635 MGI:3831647, RGD:13792537 NCBI chr10:37,809,353...37,861,309
Ensembl chr10:37,808,726...37,861,396 		JBrowse link
G Rad51 RAD51 recombinase involved_in
acts_upstream_of_or_within		 IBA
ISO		 PMID:21873635
MGI:5444025 (MGI:5442243|PMID:22778135)		 RGD PMID:22778135 PMID:21873635 MGI:5442243, RGD:13792537 NCBI chr 3:106,099,753...106,125,038
Ensembl chr 3:106,100,381...106,125,035 		JBrowse link
chiasma assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Brip1 BRCA1 interacting helicase 1 acts_upstream_of_or_within ISO MGI:4129733 (MGI:5700253|PMID:26490168) RGD PMID:26490168 MGI:5700253 NCBI chr10:70,907,266...71,031,502
Ensembl chr10:70,907,371...71,030,324 		JBrowse link
G Ccnb1ip1 cyclin B1 interacting protein 1 acts_upstream_of_or_within
involved_in		 ISO MGI:3050548 (MGI:3757893|PMID:17784788)
(MGI:5545848|PMID:24390283)		 RGD PMID:17784788 PMID:24390283 MGI:3757893 MGI:5545848 NCBI chr15:24,014,905...24,031,357
Ensembl chr15:24,014,908...24,028,475 		JBrowse link
G Msh5 mutS homolog 5 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr20:3,773,867...3,793,337
Ensembl chr20:3,776,942...3,793,336 		JBrowse link
G Rnf212 ring finger protein 212 involved_in ISO (MGI:5545848|PMID:24390283) RGD PMID:24390283 MGI:5545848 NCBI chr14:949,397...988,377
Ensembl chr14:949,448...987,831 		JBrowse link
G Sycp1 synaptonemal complex protein 1 involved_in
acts_upstream_of_or_within		 IBA
ISO
IEA		 PMID:21873635
MGI:109542 (MGI:5315075|PMID:22164254)
GO_REF:0000107		 RGD
Ensembl		 PMID:22164254 PMID:21873635 GO_REF:0000107 MGI:5315075, RGD:13792537 NCBI chr 2:190,296,688...190,456,687
Ensembl chr 2:190,296,954...190,456,737 		JBrowse link
G Sycp3 synaptonemal complex protein 3 involved_in
acts_upstream_of_or_within		 ISO (MGI:2179610|PMID:12004129)
MGI:105931 (MGI:5315075|PMID:22164254)		 RGD PMID:12004129 PMID:22164254 MGI:2179610 MGI:5315075 NCBI chr 7:22,874,055...22,888,512
Ensembl chr 7:22,874,055...22,888,511 		JBrowse link
G Tex11 testis expressed 11 acts_upstream_of_or_within ISO MGI:3526163 (MGI:3774244|PMID:18316482) RGD PMID:18316482 MGI:3774244 NCBI chr  X:65,932,904...66,196,525
Ensembl chr  X:65,932,988...66,196,187 		JBrowse link
G Ube2b ubiquitin-conjugating enzyme E2B acts_upstream_of_or_within ISO MGI:2183933 (MGI:2450033|PMID:12556476) RGD PMID:12556476 MGI:2450033 NCBI chr10:36,248,434...36,263,379
Ensembl chr10:36,248,438...36,264,665 		JBrowse link
homologous chromosome pairing at meiosis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ankrd31 ankyrin repeat domain 31 involved_in ISO (MGI:6316415|PMID:31003867), (MGI:6316551|PMID:31000436) RGD PMID:31000436 PMID:31003867 MGI:6316415 MGI:6316551 NCBI chr 2:28,079,187...28,241,722
Ensembl chr 2:28,092,882...28,241,719 		JBrowse link
G Brip1 BRCA1 interacting helicase 1 acts_upstream_of_or_within ISO MGI:4129733 (MGI:5700253|PMID:26490168) RGD PMID:26490168 MGI:5700253 NCBI chr10:70,907,266...71,031,502
Ensembl chr10:70,907,371...71,030,324 		JBrowse link
G Ccne1 cyclin E1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:1329034 (MGI:5698037|PMID:24586195)		 Ensembl
RGD		 PMID:24586195 GO_REF:0000107 MGI:5698037 NCBI chr 1:90,781,947...90,791,188
Ensembl chr 1:90,781,949...90,791,101 		JBrowse link
G Ccne2 cyclin E2 acts_upstream_of_or_within ISO MGI:88316 (MGI:5698037|PMID:24586195) RGD PMID:24586195 MGI:5698037 NCBI chr 5:24,285,078...24,298,258
Ensembl chr 5:24,284,922...24,297,632 		JBrowse link
G Dmc1 DNA meiotic recombinase 1 acts_upstream_of_or_within ISO MGI:2176331 (MGI:3719060|PMID:17696610) RGD PMID:17696610 MGI:3719060 NCBI chr 7:111,124,888...111,167,465
Ensembl chr 7:111,124,888...111,167,952 		JBrowse link
G Dnmt3c DNA methyltransferase 3C involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 Ensembl chr 3:142,178,533...142,210,954 JBrowse link
G Fancd2 FA complementation group D2 involved_in
acts_upstream_of_or_within		 IBA
IEA
ISO		 PMID:21873635
GO_REF:0000107
MGI:2673422 (MGI:2670547|PMID:12893777)		 Ensembl
RGD		 PMID:12893777 PMID:21873635 GO_REF:0000107 MGI:2670547, RGD:13792537 NCBI chr 4:146,679,014...146,743,422
Ensembl chr 4:146,679,179...146,743,412 		JBrowse link
G Hormad1 HORMA domain containing 1 acts_upstream_of_or_within ISO MGI:5587823 (MGI:5586966|PMID:22530760) RGD PMID:22530760 MGI:5586966 NCBI chr 2:183,115,815...183,152,383
Ensembl chr 2:183,116,716...183,152,383 		JBrowse link
G Iho1 interactor of HORMAD1 1 involved_in IBA
ISO		 PMID:21873635
(MGI:5822944|PMID:27723721)		 RGD PMID:27723721 PMID:21873635 MGI:5822944, RGD:13792537 NCBI chr 8:109,091,134...109,126,386
Ensembl chr 8:109,092,758...109,125,434 		JBrowse link
G Kash5 KASH domain containing 5 involved_in
acts_upstream_of_or_within		 IBA
ISO		 PMID:21873635
(MGI:5515826|PMID:24062341)		 RGD PMID:24062341 PMID:21873635 MGI:5515826, RGD:13792537 NCBI chr 1:95,668,918...95,691,353
Ensembl chr 1:95,668,886...95,691,368 		JBrowse link
G Mael maelstrom spermatogenic transposon silencer acts_upstream_of_or_within ISO MGI:3795667 (MGI:3813746|PMID:18694567) RGD PMID:18694567 MGI:3813746 NCBI chr13:78,457,073...78,496,657
Ensembl chr13:78,457,073...78,496,657 		JBrowse link
G Majin membrane anchored junction protein involved_in
acts_upstream_of_or_within		 ISS
ISO
IBA		 GO_REF:0000024
MGI:1921651 (MGI:6277530|PMID:30718482)
(MGI:5704279|PMID:26548954)
PMID:21873635		 UniProt
RGD		 PMID:26548954 PMID:30718482 PMID:21873635 GO_REF:0000024 MGI:5704279 MGI:6277530, RGD:13792537 NCBI chr 1:203,487,777...203,524,098
Ensembl chr 1:203,488,069...203,524,092 		JBrowse link
G Mei4 meiotic double-stranded break formation protein 4 involved_in
acts_upstream_of_or_within		 IBA
ISO		 PMID:21873635
MGI:4818799 (MGI:4457793|PMID:20551173)		 RGD PMID:20551173 PMID:21873635 MGI:4457793, RGD:13792537 NCBI chr 8:82,765,661...82,939,649
Ensembl chr 8:82,765,661...82,939,649 		JBrowse link
G Meiob meiosis specific with OB-fold involved_in ISS
ISO		 GO_REF:0000024
(MGI:5527015|PMID:24068956), (MGI:5538413|PMID:24240703)		 UniProt
RGD		 PMID:24068956 PMID:24240703 GO_REF:0000024 MGI:5527015 MGI:5538413 NCBI chr10:13,833,170...13,865,684
Ensembl chr10:13,833,750...13,865,046 		JBrowse link
G Mlh1 mutL homolog 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:1858054 (MGI:81371|PMID:8674118)		 Ensembl
RGD		 PMID:8674118 GO_REF:0000107 MGI:81371 NCBI chr 8:111,196,468...111,233,721
Ensembl chr 8:111,196,468...111,233,617 		JBrowse link
G Mnd1 meiotic nuclear divisions 1 involved_in ISO (PMID:16407260) RGD PMID:16407260 NCBI chr 2:169,433,523...169,496,081
Ensembl chr 2:169,433,540...169,496,096 		JBrowse link
G Morc2b microrchidia 2B involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr 7:12,314,341...12,318,421
Ensembl chr 7:12,314,349...12,318,421 		JBrowse link
G Mre11 MRE11 homolog, double strand break repair nuclease involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:3027036 (MGI:3707920|PMID:17291760)		 Ensembl
RGD		 PMID:17291760 GO_REF:0000107 MGI:3707920 NCBI chr 8:11,618,876...11,680,451
Ensembl chr 8:11,632,354...11,678,279 		JBrowse link
G Msh4 mutS homolog 4 acts_upstream_of_or_within ISO MGI:2179034 (MGI:1858570|PMID:10809667), (MGI:3056006|PMID:15467367) RGD PMID:10809667 PMID:15467367 MGI:1858570 MGI:3056006 NCBI chr 2:242,785,392...242,844,609
Ensembl chr 2:242,792,661...242,843,487 		JBrowse link
G Msh5 mutS homolog 5 acts_upstream_of_or_within ISO MGI:1858057 (MGI:1858570|PMID:10809667), (MGI:3056006|PMID:15467367) RGD PMID:10809667 PMID:15467367 MGI:1858570 MGI:3056006 NCBI chr20:3,773,867...3,793,337
Ensembl chr20:3,776,942...3,793,336 		JBrowse link
G Ndc1 NDC1 transmembrane nucleoporin involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:1856630 (MGI:5543710|PMID:24045954)		 Ensembl
RGD		 PMID:24045954 GO_REF:0000107 MGI:5543710 NCBI chr 5:122,155,992...122,202,295
Ensembl chr 5:122,155,967...122,202,291 		JBrowse link
G Prdm9 PR/SET domain 9 involved_in ISS
ISO		 GO_REF:0000024
(MGI:6102131|PMID:25894966), (MGI:6114980|PMID:29478809)		 UniProt
RGD		 PMID:25894966 PMID:29478809 GO_REF:0000024 MGI:6102131 MGI:6114980 NCBI chr 1:56,505,579...56,525,726
Ensembl chr 1:56,505,579...56,525,652 		JBrowse link
G Psmc3ip PSMC3 interacting protein involved_in ISO
IEA
IBA		 (PMID:16407260)
GO_REF:0000107
PMID:21873635		 RGD
Ensembl		 PMID:16407260 PMID:21873635 GO_REF:0000107, RGD:13792537 NCBI chr10:86,024,281...86,027,928
Ensembl chr10:86,023,950...86,027,423 		JBrowse link
G Rad21l1 RAD21 cohesin complex component like 1 acts_upstream_of_or_within ISO MGI:5292341 (MGI:5288570|PMID:21743440) RGD PMID:21743440 MGI:5288570 NCBI chr 3:140,160,128...140,188,324
Ensembl chr 3:140,160,118...140,188,298 		JBrowse link
G Rec8 REC8 meiotic recombination protein acts_upstream_of_or_within ISO MGI:3512754 (MGI:3719060|PMID:17696610) RGD PMID:17696610 MGI:3719060 NCBI chr15:29,109,862...29,117,327
Ensembl chr15:29,109,863...29,117,326 		JBrowse link
G Rnf212 ring finger protein 212 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr14:949,397...988,377
Ensembl chr14:949,448...987,831 		JBrowse link
G Sirt7 sirtuin 7 involved_in ISS
ISO		 GO_REF:0000024
(MGI:6378020|PMID:31256246)		 UniProt
RGD		 PMID:31256246 GO_REF:0000024 MGI:6378020 NCBI chr10:105,896,476...105,903,301
Ensembl chr10:105,896,476...105,903,172 		JBrowse link
G Six6os1 Six6 opposite strand transcript 1 involved_in ISO
IBA		 (PMID:33508233)
PMID:21873635
(MGI:5822939|PMID:27796301), (MGI:6716491|PMID:33508233)		 RGD PMID:27796301 PMID:33508233 PMID:21873635 MGI:5822939 MGI:6716491, RGD:13792537 NCBI chr 6:91,579,185...91,615,183
Ensembl chr 6:91,579,325...91,615,148 		JBrowse link
G Spata22 spermatogenesis associated 22 acts_upstream_of_or_within ISO MGI:5314540 (MGI:5314623|PMID:22011390) RGD PMID:22011390 MGI:5314623 NCBI chr10:57,945,272...57,963,081
Ensembl chr10:57,932,187...57,963,081 		JBrowse link
G Spo11 SPO11 initiator of meiotic double strand breaks acts_upstream_of_or_within ISO MGI:2178805|MGI:3027823 (MGI:3813746|PMID:18694567), (MGI:5567006|PMID:24589552) RGD PMID:18694567 PMID:24589552 MGI:3813746 MGI:5567006 NCBI chr 3:161,755,299...161,770,930
Ensembl chr 3:161,757,519...161,770,925 		JBrowse link
G Stag3 STAG3 cohesin complex component acts_upstream_of_or_within ISO MGI:5287255 (MGI:5575825|PMID:24797475) RGD PMID:24797475 MGI:5575825 NCBI chr12:17,284,677...17,314,936
Ensembl chr12:17,284,794...17,314,935 		JBrowse link
G Sun1 Sad1 and UNC84 domain containing 1 acts_upstream_of_or_within ISO MGI:3715140 (MGI:5567006|PMID:24589552) RGD PMID:24589552 MGI:5567006 NCBI chr12:15,396,378...15,441,277
Ensembl chr12:15,396,381...15,441,571 		JBrowse link
G Sycp1 synaptonemal complex protein 1 involved_in ISS
ISO		 GO_REF:0000024
(MGI:3579731|PMID:15937223)		 UniProt
RGD		 PMID:15937223 GO_REF:0000024 MGI:3579731 NCBI chr 2:190,296,688...190,456,687
Ensembl chr 2:190,296,954...190,456,737 		JBrowse link
G Sycp3 synaptonemal complex protein 3 acts_upstream_of_or_within ISO MGI:2179041 (MGI:3578071|PMID:15870106) RGD PMID:15870106 MGI:3578071 NCBI chr 7:22,874,055...22,888,512
Ensembl chr 7:22,874,055...22,888,511 		JBrowse link
G Terb1 telomere repeat binding bouquet formation protein 1 involved_in
acts_upstream_of_or_within		 IBA
ISO		 PMID:21873635
MGI:1921651 (MGI:6277530|PMID:30718482)
(MGI:5545837|PMID:24413433)		 RGD PMID:24413433 PMID:30718482 PMID:21873635 MGI:5545837 MGI:6277530, RGD:13792537 NCBI chr19:473,720...528,069
Ensembl chr19:473,218...528,084 		JBrowse link
G Terb2 telomere repeat binding bouquet formation protein 2 involved_in
acts_upstream_of_or_within		 IBA
ISO		 PMID:21873635
MGI:1923913|MGI:2443187|MGI:6362934|MGI:6362936 (MGI:6277530|PMID:30718482)
(MGI:5704279|PMID:26548954)		 RGD PMID:26548954 PMID:30718482 PMID:21873635 MGI:5704279 MGI:6277530, RGD:13792537 NCBI chr 3:109,138,343...109,156,700
Ensembl chr 3:109,138,343...109,156,683 		JBrowse link
G Tex15 testis expressed 15, meiosis and synapsis associated acts_upstream_of_or_within ISO MGI:3526165 (MGI:3794139|PMID:18283110) RGD PMID:18283110 MGI:3794139 NCBI chr16:58,598,991...58,659,005
Ensembl chr16:58,598,989...58,658,467 		JBrowse link
G Zcwpw1 zinc finger CW-type and PWWP domain containing 1 acts_upstream_of_or_within
involved_in		 ISO (MGI:6358520|PMID:31453335), (MGI:6442007|PMID:32374261)
(MGI:6443266|PMID:32352380), (MGI:6467709|PMID:32744506)		 RGD PMID:31453335 PMID:32352380 PMID:32374261 PMID:32744506 MGI:6358520 MGI:6442007 MGI:6443266 MGI:6467709 NCBI chr12:18,880,625...18,910,713
Ensembl chr12:18,880,633...18,910,711 		JBrowse link
lateral element assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Sycp1 synaptonemal complex protein 1 involved_in
acts_upstream_of_or_within		 IBA
ISO
IEA		 PMID:21873635
MGI:109542 (MGI:5315075|PMID:22164254)
GO_REF:0000107		 RGD
Ensembl		 PMID:22164254 PMID:21873635 GO_REF:0000107 MGI:5315075, RGD:13792537 NCBI chr 2:190,296,688...190,456,687
Ensembl chr 2:190,296,954...190,456,737 		JBrowse link
G Sycp3 synaptonemal complex protein 3 acts_upstream_of_or_within ISO MGI:105931 (MGI:5315075|PMID:22164254) RGD PMID:22164254 MGI:5315075 NCBI chr 7:22,874,055...22,888,512
Ensembl chr 7:22,874,055...22,888,511 		JBrowse link
meiotic attachment of telomere to nuclear envelope term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Majin membrane anchored junction protein involved_in
acts_upstream_of_or_within		 IBA
ISO
ISS		 PMID:21873635
MGI:1921651 (MGI:6277530|PMID:30718482)
(MGI:5704279|PMID:26548954)
GO_REF:0000024		 RGD
UniProt		 PMID:26548954 PMID:30718482 PMID:21873635 GO_REF:0000024 MGI:5704279 MGI:6277530, RGD:13792537 NCBI chr 1:203,487,777...203,524,098
Ensembl chr 1:203,488,069...203,524,092 		JBrowse link
G Rad21l1 RAD21 cohesin complex component like 1 acts_upstream_of_or_within ISO MGI:5292341 (MGI:5288570|PMID:21743440) RGD PMID:21743440 MGI:5288570 NCBI chr 3:140,160,128...140,188,324
Ensembl chr 3:140,160,118...140,188,298 		JBrowse link
G Spdya speedy/RINGO cell cycle regulator family member A acts_upstream_of_or_within ISO MGI:5888863 (MGI:5829137|PMID:28031483) RGD PMID:28031483 MGI:5829137 NCBI chr 6:23,905,574...23,954,926
Ensembl chr 6:23,910,223...23,954,850 		JBrowse link
G Sun1 Sad1 and UNC84 domain containing 1 involved_in
acts_upstream_of_or_within		 ISO (MGI:5573020|PMID:24586178)
MGI:6362937 (MGI:6277530|PMID:30718482)		 RGD PMID:24586178 PMID:30718482 MGI:5573020 MGI:6277530 NCBI chr12:15,396,378...15,441,277
Ensembl chr12:15,396,381...15,441,571 		JBrowse link
G Terb1 telomere repeat binding bouquet formation protein 1 involved_in
acts_upstream_of_or_within		 IBA
ISO		 PMID:21873635
MGI:1921651 (MGI:6277530|PMID:30718482)
(MGI:5545837|PMID:24413433), (MGI:5704279|PMID:26548954)		 RGD PMID:24413433 PMID:26548954 PMID:30718482 PMID:21873635 MGI:5545837 MGI:5704279 MGI:6277530, RGD:13792537 NCBI chr19:473,720...528,069
Ensembl chr19:473,218...528,084 		JBrowse link
G Terb2 telomere repeat binding bouquet formation protein 2 involved_in
acts_upstream_of_or_within		 IBA
ISO		 PMID:21873635
(MGI:5704279|PMID:26548954)
MGI:1923913|MGI:2443187|MGI:6362934|MGI:6362936 (MGI:6277530|PMID:30718482)		 RGD PMID:26548954 PMID:30718482 PMID:21873635 MGI:5704279 MGI:6277530, RGD:13792537 NCBI chr 3:109,138,343...109,156,700
Ensembl chr 3:109,138,343...109,156,683 		JBrowse link
meiotic chromosome condensation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mastl microtubule associated serine/threonine kinase-like involved_in ISO (PMID:23843240) RGD PMID:23843240 NCBI chr17:85,250,512...85,287,479
Ensembl chr17:85,251,997...85,287,353 		JBrowse link
G Ncapd2 non-SMC condensin I complex, subunit D2 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 4:157,968,814...157,992,314
Ensembl chr 4:157,968,815...157,992,020 		JBrowse link
G Ncapd3 non-SMC condensin II complex, subunit D3 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 8:25,437,067...25,506,375
Ensembl chr 8:25,437,123...25,506,373 		JBrowse link
G Ncaph non-SMC condensin I complex, subunit H acts_upstream_of_or_within
involved_in		 ISO (MGI:5317363|PMID:21795393)
MGI:1289164 (MGI:5784807|PMID:25961503)		 RGD PMID:21795393 PMID:25961503 MGI:5317363 MGI:5784807 NCBI chr 3:114,371,937...114,399,178
Ensembl chr 3:114,371,941...114,399,180 		JBrowse link
G Ncaph2 non-SMC condensin II complex, subunit H2 involved_in IBA
ISO
IEA		 PMID:21873635
(MGI:5784807|PMID:25961503)
GO_REF:0000107		 RGD
Ensembl		 PMID:25961503 PMID:21873635 GO_REF:0000107 MGI:5784807, RGD:13792537 NCBI chr 7:120,422,926...120,439,942
Ensembl chr 7:120,422,956...120,439,938 		JBrowse link
G Smc2 structural maintenance of chromosomes 2 acts_upstream_of_or_within ISO (MGI:5317363|PMID:21795393) RGD PMID:21795393 MGI:5317363 NCBI chr 5:66,806,882...66,853,478
Ensembl chr 5:66,807,011...66,853,242 		JBrowse link
G Smc4 structural maintenance of chromosomes 4 acts_upstream_of_or_within ISO (MGI:5317363|PMID:21795393) RGD PMID:21795393 MGI:5317363 NCBI chr 2:153,240,243...153,268,722
Ensembl chr 2:153,240,283...153,271,571 		JBrowse link
meiotic telomere clustering term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atm ATM serine/threonine kinase acts_upstream_of_or_within ISO MGI:1857132 (MGI:3840418|PMID:17010969) RGD PMID:17010969 MGI:3840418 NCBI chr 8:53,828,741...53,932,773
Ensembl chr 8:53,831,093...53,932,437 		JBrowse link
G Cep63 centrosomal protein 63 acts_upstream_of_or_within ISO MGI:4377328 (MGI:5662131|PMID:26158450) RGD PMID:26158450 MGI:5662131 NCBI chr 8:103,162,639...103,214,177
Ensembl chr 8:103,162,700...103,214,177 		JBrowse link
G Kash5 KASH domain containing 5 acts_upstream_of_or_within
involved_in		 ISO
IEA		 GO:0030286 (MGI:5515826|PMID:24062341)
GO_REF:0000107		 RGD
Ensembl		 PMID:24062341 GO_REF:0000107 MGI:5515826 NCBI chr 1:95,668,918...95,691,353
Ensembl chr 1:95,668,886...95,691,368 		JBrowse link
G Majin membrane anchored junction protein involved_in ISS
ISO		 GO_REF:0000024
(MGI:5704279|PMID:26548954)		 UniProt
RGD		 PMID:26548954 GO_REF:0000024 MGI:5704279 NCBI chr 1:203,487,777...203,524,098
Ensembl chr 1:203,488,069...203,524,092 		JBrowse link
G Mei1 meiotic double-stranded break formation protein 1 acts_upstream_of_or_within ISO MGI:2176973 (MGI:3840418|PMID:17010969) RGD PMID:17010969 MGI:3840418 NCBI chr 7:113,590,142...113,643,513
Ensembl chr 7:113,590,142...113,643,511 		JBrowse link
G Mlh1 mutL homolog 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:1858054 (MGI:3840418|PMID:17010969)		 Ensembl
RGD		 PMID:17010969 GO_REF:0000107 MGI:3840418 NCBI chr 8:111,196,468...111,233,721
Ensembl chr 8:111,196,468...111,233,617 		JBrowse link
G Spo11 SPO11 initiator of meiotic double strand breaks acts_upstream_of_or_within ISO MGI:2178805 (MGI:3840418|PMID:17010969) RGD PMID:17010969 MGI:3840418 NCBI chr 3:161,755,299...161,770,930
Ensembl chr 3:161,757,519...161,770,925 		JBrowse link
G Terb1 telomere repeat binding bouquet formation protein 1 involved_in ISO (MGI:5545837|PMID:24413433), (MGI:5704279|PMID:26548954) RGD PMID:24413433 PMID:26548954 MGI:5545837 MGI:5704279 NCBI chr19:473,720...528,069
Ensembl chr19:473,218...528,084 		JBrowse link
G Terb2 telomere repeat binding bouquet formation protein 2 involved_in ISO (MGI:5704279|PMID:26548954) RGD PMID:26548954 MGI:5704279 NCBI chr 3:109,138,343...109,156,700
Ensembl chr 3:109,138,343...109,156,683 		JBrowse link
G Terf1 telomeric repeat binding factor 1 acts_upstream_of_or_within ISO MGI:2677837 (MGI:3840418|PMID:17010969) RGD PMID:17010969 MGI:3840418 NCBI chr 5:3,443,103...3,472,377
Ensembl chr 5:3,443,106...3,472,340 		JBrowse link
G Ube2b ubiquitin-conjugating enzyme E2B acts_upstream_of_or_within ISO MGI:2183933 (MGI:3840418|PMID:17010969) RGD PMID:17010969 MGI:3840418 NCBI chr10:36,248,434...36,263,379
Ensembl chr10:36,248,438...36,264,665 		JBrowse link
synaptonemal complex assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ago4 argonaute RISC component 4 acts_upstream_of_or_within ISO MGI:5438526 (MGI:5437526|PMID:22863743) RGD PMID:22863743 MGI:5437526 NCBI chr 5:138,780,446...138,825,898
Ensembl chr 5:138,783,069...138,825,632 		JBrowse link
G Bag6 BAG cochaperone 6 involved_in ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
(MGI:3808636|PMID:18678708)		 UniProt
Ensembl
RGD		 PMID:18678708 GO_REF:0000024 GO_REF:0000107 MGI:3808636 NCBI chr20:3,675,938...3,690,414
Ensembl chr20:3,675,938...3,688,657 		JBrowse link
G C14h1orf146 similar to human chromosome 1 open reading frame 146 involved_in ISO
IBA		 (MGI:6400008|PMID:30949703)
PMID:21873635		 RGD PMID:30949703 PMID:21873635 MGI:6400008, RGD:13792537 NCBI chr14:2,230,404...2,250,420
Ensembl chr14:2,231,451...2,270,782 		JBrowse link
G Cpeb1 cytoplasmic polyadenylation element binding protein 1 acts_upstream_of_or_within ISO MGI:3606747 (MGI:2664436|PMID:12815066), (MGI:3606735|PMID:11702780) RGD PMID:11702780 PMID:12815066 MGI:2664436 MGI:3606735 NCBI chr 1:135,300,048...135,407,688
Ensembl chr 1:135,300,461...135,409,760 		JBrowse link
G Ehmt2 euchromatic histone lysine methyltransferase 2 acts_upstream_of_or_within ISO MGI:3718790 (MGI:3717933|PMID:17599069) RGD PMID:17599069 MGI:3717933 NCBI chr20:3,919,623...3,936,751
Ensembl chr20:3,919,624...3,941,547 		JBrowse link
G Hormad1 HORMA domain containing 1 involved_in ISS
ISO		 GO_REF:0000024
(MGI:5009722|PMID:21478856)		 UniProt
RGD		 PMID:21478856 GO_REF:0000024 MGI:5009722 NCBI chr 2:183,115,815...183,152,383
Ensembl chr 2:183,116,716...183,152,383 		JBrowse link
G Mcmdc2 minichromosome maintenance domain containing 2 acts_upstream_of_or_within ISO MGI:2178050|MGI:5511194 (MGI:5805564|PMID:27760146) RGD PMID:27760146 MGI:5805564 NCBI chr 5:9,291,967...9,337,526
Ensembl chr 5:9,298,101...9,338,300 		JBrowse link
G Meioc meiosis specific with coiled-coil domain involved_in ISO (MGI:5770021|PMID:26742488) RGD PMID:26742488 MGI:5770021 NCBI chr10:87,628,807...87,646,485
Ensembl chr10:87,628,875...87,646,752 		JBrowse link
G Mlh3 mutL homolog 3 acts_upstream_of_or_within ISO MGI:2384218 (MGI:3612193|PMID:16260499) RGD PMID:16260499 MGI:3612193 NCBI chr 6:104,881,483...104,917,686
Ensembl chr 6:104,881,483...104,917,728 		JBrowse link
G Rad21l1 RAD21 cohesin complex component like 1 acts_upstream_of_or_within ISO MGI:1349669|MGI:1929645 (MGI:5428050|PMID:22711701), (MGI:5567006|PMID:24589552) RGD PMID:22711701 PMID:24589552 MGI:5428050 MGI:5567006 NCBI chr 3:140,160,128...140,188,324
Ensembl chr 3:140,160,118...140,188,298 		JBrowse link
G Rec8 REC8 meiotic recombination protein acts_upstream_of_or_within ISO MGI:1349669|MGI:3652039 (MGI:5428050|PMID:22711701), (MGI:5567006|PMID:24589552) RGD PMID:22711701 PMID:24589552 MGI:5428050 MGI:5567006 NCBI chr15:29,109,862...29,117,327
Ensembl chr15:29,109,863...29,117,326 		JBrowse link
G Shoc1 shortage in chiasmata 1 involved_in ISO (MGI:7387164|PMID:35485979) RGD PMID:35485979 MGI:7387164 NCBI chr 5:73,864,423...73,956,487
Ensembl chr 5:73,866,334...73,956,444 		JBrowse link
G Six6os1 Six6 opposite strand transcript 1 involved_in ISO (MGI:6716491|PMID:33508233) RGD PMID:33508233 MGI:6716491 NCBI chr 6:91,579,185...91,615,183
Ensembl chr 6:91,579,325...91,615,148 		JBrowse link
G Spo11 SPO11 initiator of meiotic double strand breaks acts_upstream_of_or_within ISO MGI:1929645|MGI:2178805|MGI:3652039 (MGI:5567006|PMID:24589552), (MGI:5805564|PMID:27760146) RGD PMID:24589552 PMID:27760146 MGI:5567006 MGI:5805564 NCBI chr 3:161,755,299...161,770,930
Ensembl chr 3:161,757,519...161,770,925 		JBrowse link
G Syce1 synaptonemal complex central element protein 1 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 1:195,852,171...195,863,174
Ensembl chr 1:195,852,172...195,863,174 		JBrowse link
G Syce1l synaptonemal complex central element protein 1-like involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr19:41,625,074...41,635,541
Ensembl chr19:41,617,180...41,635,526 		JBrowse link
G Syce2 synaptonemal complex central element protein 2 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr19:23,266,236...23,291,265
Ensembl chr19:23,268,869...23,300,980 		JBrowse link
G Syce3 synaptonemal complex central element protein 3 involved_in IBA
ISO		 PMID:21873635
(MGI:5008660|PMID:21637789)		 RGD PMID:21637789 PMID:21873635 MGI:5008660, RGD:13792537 NCBI chr 7:120,456,800...120,482,882
Ensembl chr 7:120,456,800...120,482,973 		JBrowse link
G Sycp1 synaptonemal complex protein 1 involved_in
acts_upstream_of_or_within		 ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000002
(MGI:3579731|PMID:15937223), (MGI:3581466|PMID:15944401)
MGI:105931|MGI:109542|MGI:3580000 (MGI:5315075|PMID:22164254)		 UniProt
InterPro
RGD		 PMID:15937223 PMID:15944401 PMID:22164254 GO_REF:0000002 GO_REF:0000024 MGI:3579731 MGI:3581466 MGI:5315075 NCBI chr 2:190,296,688...190,456,687
Ensembl chr 2:190,296,954...190,456,737 		JBrowse link
G Sycp3 synaptonemal complex protein 3 involved_in
acts_upstream_of_or_within		 ISO (MGI:1352918|PMID:10678170)
MGI:1913904 (MGI:5315075|PMID:22164254)		 RGD PMID:10678170 PMID:22164254 MGI:1352918 MGI:5315075 NCBI chr 7:22,874,055...22,888,512
Ensembl chr 7:22,874,055...22,888,511 		JBrowse link
G Syde1 synapse defective Rho GTPase homolog 1 acts_upstream_of_or_within ISO (MGI:5515279|PMID:23791195) RGD PMID:23791195 MGI:5515279 NCBI chr 7:11,032,931...11,038,917
Ensembl chr 7:11,032,898...11,039,869 		JBrowse link
G Terb2 telomere repeat binding bouquet formation protein 2 acts_upstream_of_or_within ISO MGI:6362934|MGI:6362936 (MGI:6277530|PMID:30718482) RGD PMID:30718482 MGI:6277530 NCBI chr 3:109,138,343...109,156,700
Ensembl chr 3:109,138,343...109,156,683 		JBrowse link
G Tex11 testis expressed 11 involved_in
acts_upstream_of_or_within		 IBA
ISO		 PMID:21873635
MGI:3526163 (MGI:3774244|PMID:18316482)		 RGD PMID:18316482 PMID:21873635 MGI:3774244, RGD:13792537 NCBI chr  X:65,932,904...66,196,525
Ensembl chr  X:65,932,988...66,196,187 		JBrowse link
G Tex12 testis expressed 12 involved_in
acts_upstream_of_or_within		 IBA
ISO		 PMID:21873635
MGI:109542|MGI:3811722 (MGI:5315075|PMID:22164254)		 RGD PMID:22164254 PMID:21873635 MGI:5315075, RGD:13792537 NCBI chr 8:50,908,161...50,913,202
Ensembl chr 8:50,909,052...50,913,217 		JBrowse link
G Tex15 testis expressed 15, meiosis and synapsis associated acts_upstream_of_or_within
involved_in		 ISO
IBA		 MGI:3526165 (MGI:3794139|PMID:18283110)
PMID:21873635		 RGD PMID:18283110 PMID:21873635 MGI:3794139, RGD:13792537 NCBI chr16:58,598,991...58,659,005
Ensembl chr16:58,598,989...58,658,467 		JBrowse link
G Trip13 thyroid hormone receptor interactor 13 involved_in ISS
ISO		 GO_REF:0000024
(MGI:4821667|PMID:20711356)		 UniProt
RGD		 PMID:20711356 GO_REF:0000024 MGI:4821667 NCBI chr 1:29,357,093...29,402,078
Ensembl chr 1:29,357,130...29,402,074 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19553
    reproductive process 1817
      meiotic cell cycle process 245
        chromosome organization involved in meiotic cell cycle 73
          centromere detachment from spindle pole body involved in meiotic chromosome organization 0
          homologous chromosome pairing at meiosis + 57
          karyosome formation + 0
          kinetochore disassembly involved in meiotic chromosome organization 0
          linear element maturation + 0
          meiotic centromere clustering 0
          meiotic chromosome condensation 7
          meiotic sister chromatid segregation + 0
          meiotic telomere clustering + 14
          meiotic telomere maintenance via semi-conservative replication 0
          premeiotic DNA replication DNA duplex unwinding 0
          synaptonemal complex assembly + 26
Path 2
Term Annotations click to browse term
  biological_process 19553
    cellular process 18233
      cellular component organization or biogenesis 6802
        cellular component organization 6536
          organelle organization 3601
            chromosome organization 570
              chromosome organization involved in meiotic cell cycle 73
                centromere detachment from spindle pole body involved in meiotic chromosome organization 0
                homologous chromosome pairing at meiosis + 57
                karyosome formation + 0
                kinetochore disassembly involved in meiotic chromosome organization 0
                linear element maturation + 0
                meiotic centromere clustering 0
                meiotic chromosome condensation 7
                meiotic sister chromatid segregation + 0
                meiotic telomere clustering + 14
                meiotic telomere maintenance via semi-conservative replication 0
                premeiotic DNA replication DNA duplex unwinding 0
                synaptonemal complex assembly + 26
paths to the root