Submit Data |  Help |  Video Tutorials |  News |  Publications |  FTP Download |  REST API |  Citing RGD |  Contact   
Gene: Chmp6 (charged multivesicular body protein 6) Rattus norvegicus
Analyze
Symbol: Chmp6
Name: charged multivesicular body protein 6
Description: Predicted to have protein N-terminus binding activity. Predicted to be involved in several processes, including midbody abscission; regulation of protein metabolic process; and viral budding via host ESCRT complex. Predicted to localize to the ESCRT III complex. Orthologous to human CHMP6 (charged multivesicular body protein 6); PARTICIPATES IN endocytosis pathway; INTERACTS WITH 2,4-dinitrotoluene; 4-amino-2,6-dinitrotoluene; bisphenol A.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: chromatin modifying protein 6; LOC287873; RGD1565325; similar to hypothetical protein FLJ11749
Orthologs:
Homo sapiens (human) : CHMP6 (charged multivesicular body protein 6)  HGNC  Alliance
Mus musculus (house mouse) : Chmp6 (charged multivesicular body protein 6)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Chmp6 (charged multivesicular body protein 6)
Pan paniscus (bonobo/pygmy chimpanzee) : CHMP6 (charged multivesicular body protein 6)
Canis lupus familiaris (dog) : CHMP6 (charged multivesicular body protein 6)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Chmp6 (charged multivesicular body protein 6)
Sus scrofa (pig) : CHMP6 (charged multivesicular body protein 6)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.010109,073,678 - 109,079,348 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.010108,673,903 - 108,679,573 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.410109,317,687 - 109,323,357 (+)NCBIRGSC3.4rn4RGSC3.4
Celera10103,737,639 - 103,743,309 (+)NCBICelera
Cytogenetic Map10q32.3NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 5.0)

Additional Information

External Database Links
Nomenclature History
 
More on Chmp6
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1565325
Created: 2006-02-09
Species: Rattus norvegicus
Last Modified: 2019-08-20
Status: ACTIVE



NHLBI Logo

RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.