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Gene: Cep97 (centrosomal protein 97) Rattus norvegicus

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Symbol:

Cep97

Name:

centrosomal protein 97

RGD ID:

1307400

Description:

Predicted to be involved in negative regulation of cilium assembly and regulation of mitotic spindle assembly. Predicted to be located in centriole. Predicted to be part of protein-containing complex. Predicted to be active in centrosome. Orthologous to human CEP97 (centrosomal protein 97); INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; bisphenol A; gentamycin.

Type:

protein-coding

RefSeq Status:

PROVISIONAL

Previously known as:

centrosomal protein 97kDa; centrosomal protein of 97 kDa; leucine-rich repeats and IQ motif containing 2; LOC304007; Lrriq2; RGD1307400; similar to RIKEN cDNA 2810403B08

RGD Orthologs

Alliance Orthologs

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	CEP97 (centrosomal protein 97)	HGNC	EggNOG, Ensembl, HomoloGene, Inparanoid, NCBI, OMA, OrthoDB, Panther, Treefam
Mus musculus (house mouse):	Cep97 (centrosomal protein 97)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	Cep97 (centrosomal protein 97)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	CEP97 (centrosomal protein 97)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	CEP97 (centrosomal protein 97)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Cep97 (centrosomal protein 97)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	CEP97 (centrosomal protein 97)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	CEP97 (centrosomal protein 97)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Cep97 (centrosomal protein 97)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Alliance orthologs ³
Homo sapiens (human):	CEP97 (centrosomal protein 97)	Alliance	DIOPT (Ensembl Compara\|HGNC\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Mus musculus (house mouse):	Cep97 (centrosomal protein 97)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Danio rerio (zebrafish):	cep97 (centrosomal protein 97)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OrthoFinder\|OrthoInspector\|PhylomeDB\|SonicParanoid)
Drosophila melanogaster (fruit fly):	Cep97	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OrthoFinder\|OrthoInspector\|PANTHER\|SonicParanoid)
Caenorhabditis elegans (roundworm):	R02F11.4	Alliance	DIOPT (OrthoFinder\|OrthoInspector)
Xenopus tropicalis (tropical clawed frog):	cep97	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)

Latest Assembly:

GRCr8 - GRCr8 Assembly

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	11	58,152,561 - 58,187,174 (+)	NCBI		GRCr8
mRatBN7.2	11	44,683,503 - 44,711,471 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	11	44,683,506 - 44,711,471 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	11	53,460,034 - 53,487,994 (+)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	11	46,121,663 - 46,149,623 (+)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	11	45,245,827 - 45,273,786 (+)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	11	47,146,409 - 47,174,460 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	11	47,146,308 - 47,174,713 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	11	50,327,756 - 50,355,273 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	11	45,658,903 - 45,687,089 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	11	45,716,552 - 45,744,460 (+)	NCBI
Celera	11	44,434,493 - 44,462,608 (+)	NCBI		Celera
Cytogenetic Map	11	q12	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
Cep97	Rat	Developmental Disabilities		ISO	CEP97 (Homo sapiens)	8554872	ClinVar Annotator: match by term: Global developmental delay	ClinVar	PMID:26539891

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
Cep97	Rat	1,2-dichloroethane	decreases expression	ISO	Cep97 (Mus musculus)	6480464	ethylene dichloride results in decreased expression of CEP97 mRNA	CTD	PMID:28960355
Cep97	Rat	2,3,7,8-tetrachlorodibenzodioxine	affects expression	EXP		6480464	Tetrachlorodibenzodioxin affects the expression of CEP97 mRNA	CTD	PMID:22298810
Cep97	Rat	2,3,7,8-tetrachlorodibenzodioxine	affects expression	ISO	Cep97 (Mus musculus)	6480464	Tetrachlorodibenzodioxin affects the expression of CEP97 mRNA	CTD	PMID:21570461
Cep97	Rat	2-palmitoylglycerol	increases expression	ISO	CEP97 (Homo sapiens)	6480464	2-palmitoylglycerol results in increased expression of CEP97 mRNA	CTD	PMID:37199045
Cep97	Rat	4,4'-diaminodiphenylmethane	affects expression	ISO	Cep97 (Mus musculus)	6480464	4 and 4'-diaminodiphenylmethane affects the expression of CEP97 mRNA	CTD	PMID:18648102
Cep97	Rat	4,4'-sulfonyldiphenol	decreases methylation	ISO	CEP97 (Homo sapiens)	6480464	bisphenol S results in decreased methylation of CEP97 gene	CTD	PMID:31601247
Cep97	Rat	all-trans-retinoic acid	decreases expression	ISO	CEP97 (Homo sapiens)	6480464	Tretinoin results in decreased expression of CEP97 mRNA	CTD	PMID:33167477
Cep97	Rat	arsenite(3-)	multiple interactions	ISO	CEP97 (Homo sapiens)	6480464	arsenite inhibits the reaction [G3BP1 protein binds to CEP97 mRNA]	CTD	PMID:32406909
Cep97	Rat	benzo[a]pyrene	decreases expression	ISO	Cep97 (Mus musculus)	6480464	Benzo(a)pyrene results in decreased expression of CEP97 mRNA	CTD	PMID:19770486
Cep97	Rat	benzo[a]pyrene	increases expression	ISO	Cep97 (Mus musculus)	6480464	Benzo(a)pyrene results in increased expression of CEP97 mRNA	CTD	PMID:22228805
Cep97	Rat	bis(2-ethylhexyl) phthalate	increases expression	ISO	Cep97 (Mus musculus)	6480464	Diethylhexyl Phthalate results in increased expression of CEP97 mRNA	CTD	PMID:34319233
Cep97	Rat	bisphenol A	decreases expression	EXP		6480464	bisphenol A results in decreased expression of CEP97 mRNA	CTD	PMID:25181051
Cep97	Rat	bisphenol A	decreases expression	ISO	Cep97 (Mus musculus)	6480464	bisphenol A results in decreased expression of CEP97 mRNA	CTD	PMID:32156529
Cep97	Rat	bisphenol A	decreases methylation	ISO	CEP97 (Homo sapiens)	6480464	bisphenol A results in decreased methylation of CEP97 gene	CTD	PMID:31601247
Cep97	Rat	bisphenol A	increases expression	ISO	Cep97 (Mus musculus)	6480464	bisphenol A results in increased expression of CEP97 mRNA	CTD	PMID:33221593
Cep97	Rat	bisphenol A	increases expression	EXP		6480464	bisphenol A results in increased expression of CEP97 mRNA	CTD	PMID:30816183 and PMID:32528016
Cep97	Rat	chromium(6+)	multiple interactions	ISO	CEP97 (Homo sapiens)	6480464	[zinc chromate results in increased abundance of chromium hexavalent ion] which results in increased expression of CEP97 mRNA	CTD	PMID:38479592
Cep97	Rat	Dibutyl phosphate	affects expression	ISO	CEP97 (Homo sapiens)	6480464	di-n-butylphosphoric acid affects the expression of CEP97 mRNA	CTD	PMID:37042841
Cep97	Rat	doxorubicin	decreases expression	ISO	CEP97 (Homo sapiens)	6480464	Doxorubicin results in decreased expression of CEP97 mRNA	CTD	PMID:29803840
Cep97	Rat	gentamycin	decreases expression	EXP		6480464	Gentamicins results in decreased expression of CEP97 mRNA	CTD	PMID:33387578
Cep97	Rat	ivermectin	decreases expression	ISO	CEP97 (Homo sapiens)	6480464	Ivermectin results in decreased expression of CEP97 protein	CTD	PMID:32959892
Cep97	Rat	methyl methanesulfonate	increases expression	ISO	CEP97 (Homo sapiens)	6480464	Methyl Methanesulfonate results in increased expression of CEP97 mRNA	CTD	PMID:23649840
Cep97	Rat	paracetamol	increases expression	ISO	CEP97 (Homo sapiens)	6480464	Acetaminophen results in increased expression of CEP97 mRNA	CTD	PMID:22230336
Cep97	Rat	pirinixic acid	decreases expression	ISO	Cep97 (Mus musculus)	6480464	pirinixic acid results in decreased expression of CEP97 mRNA	CTD	PMID:20813756
Cep97	Rat	senecionine	increases expression	ISO	Cep97 (Mus musculus)	6480464	senecionine results in increased expression of CEP97 protein	CTD	PMID:35357534
Cep97	Rat	sodium arsenite	increases expression	ISO	CEP97 (Homo sapiens)	6480464	sodium arsenite results in increased expression of CEP97 mRNA	CTD	PMID:21457566
Cep97	Rat	sunitinib	decreases expression	ISO	CEP97 (Homo sapiens)	6480464	Sunitinib results in decreased expression of CEP97 mRNA	CTD	PMID:31533062
Cep97	Rat	thioacetamide	increases expression	EXP		6480464	Thioacetamide results in increased expression of CEP97 mRNA	CTD	PMID:23411599 and PMID:34492290
Cep97	Rat	titanium dioxide	increases methylation	ISO	Cep97 (Mus musculus)	6480464	titanium dioxide results in increased methylation of CEP97 gene	CTD	PMID:35295148
Cep97	Rat	triphenyl phosphate	affects expression	ISO	CEP97 (Homo sapiens)	6480464	triphenyl phosphate affects the expression of CEP97 mRNA	CTD	PMID:37042841
Cep97	Rat	urethane	increases expression	ISO	CEP97 (Homo sapiens)	6480464	Urethane results in increased expression of CEP97 mRNA	CTD	PMID:28818685
Cep97	Rat	valproic acid	decreases expression	ISO	CEP97 (Homo sapiens)	6480464	Valproic Acid results in decreased expression of CEP97 mRNA	CTD	PMID:23179753 and PMID:28001369
Cep97	Rat	vitamin E	decreases expression	ISO	CEP97 (Homo sapiens)	6480464	Vitamin E results in decreased expression of CEP97 mRNA	CTD	PMID:19244175

Biological Process

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
Cep97	Rat	negative regulation of cilium assembly	involved_in	ISO	CEP97 (Homo sapiens)	1624291	PMID:17719545 and PMID:30375385	RGD	PMID:17719545 and PMID:30375385
Cep97	Rat	negative regulation of cilium assembly	involved_in	IEA	UniProtKB:Q9CZ62 and ensembl:ENSMUSP00000023270	1600115	GO_REF:0000107	Ensembl	GO_REF:0000107
Cep97	Rat	negative regulation of cilium assembly	involved_in	IBA	MGI:1921451 more ...	1600115	GO_REF:0000033	GO_Central	GO_REF:0000033
Cep97	Rat	negative regulation of cilium assembly	involved_in	ISO	Cep97 (Mus musculus)	1624291	PMID:17719545	RGD	PMID:17719545
Cep97	Rat	regulation of mitotic spindle assembly	involved_in	ISO	CEP97 (Homo sapiens)	1624291	PMID:17719545	RGD	PMID:17719545

Cellular Component

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
Cep97	Rat	centriole	located_in	ISO	CEP97 (Homo sapiens)	1624291	PMID:30375385	RGD	PMID:30375385
Cep97	Rat	centrosome	located_in	ISO	CEP97 (Homo sapiens)	1624291	PMID:21399614 and PMID:30375385	RGD	PMID:21399614 and PMID:30375385
Cep97	Rat	centrosome	located_in	IEA	UniProtKB:Q9CZ62 and ensembl:ENSMUSP00000023270	1600115	GO_REF:0000107	Ensembl	GO_REF:0000107
Cep97	Rat	centrosome	located_in	ISO	Cep97 (Mus musculus)	1624291	PMID:30375385	RGD	PMID:30375385
Cep97	Rat	centrosome	is_active_in	IBA	FB:FBgn0031575 more ...	1600115	GO_REF:0000033	GO_Central	GO_REF:0000033
Cep97	Rat	protein-containing complex	part_of	ISO	CEP97 (Homo sapiens)	1624291	PMID:24421332	RGD	PMID:24421332

Molecular Function

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
Cep97	Rat	protein binding	enables	ISO	CEP97 (Homo sapiens)	1624291	UniProtKB:O43303 more ...	RGD	PMID:17719545 more ...

#	Reference Title	Reference Citation
1.	Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium.	Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions

PMID:17719545	PMID:21399614	PMID:21700703	PMID:24421332

Cep97
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	11	58,152,561 - 58,187,174 (+)	NCBI		GRCr8
mRatBN7.2	11	44,683,503 - 44,711,471 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	11	44,683,506 - 44,711,471 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	11	53,460,034 - 53,487,994 (+)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	11	46,121,663 - 46,149,623 (+)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	11	45,245,827 - 45,273,786 (+)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	11	47,146,409 - 47,174,460 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	11	47,146,308 - 47,174,713 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	11	50,327,756 - 50,355,273 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	11	45,658,903 - 45,687,089 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	11	45,716,552 - 45,744,460 (+)	NCBI
Celera	11	44,434,493 - 44,462,608 (+)	NCBI		Celera
Cytogenetic Map	11	q12	NCBI

CEP97
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	3	101,724,614 - 101,770,562 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	3	101,724,534 - 101,770,562 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	3	101,443,458 - 101,489,406 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	3	102,926,184 - 102,968,871 (+)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	3	102,926,183 - 102,968,871	NCBI
Celera	3	99,836,584 - 99,879,276 (+)	NCBI		Celera
Cytogenetic Map	3	q12.3	NCBI
HuRef	3	98,812,356 - 98,854,863 (+)	NCBI		HuRef
CHM1_1	3	101,406,776 - 101,449,462 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	3	104,437,398 - 104,483,348 (+)	NCBI		T2T-CHM13v2.0

Cep97
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	16	55,720,250 - 55,755,237 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	16	55,720,251 - 55,755,218 (-)	Ensembl		GRCm39 Ensembl
GRCm38	16	55,899,888 - 55,934,848 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	16	55,899,888 - 55,934,855 (-)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	16	55,900,001 - 55,934,961 (-)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	16	55,827,214 - 55,859,799 (-)	NCBI		MGSCv36	mm8
Celera	16	56,215,320 - 56,250,333 (-)	NCBI		Celera
Cytogenetic Map	16	C1.1	NCBI
cM Map	16	33.69	NCBI

Cep97
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0	NW_004955427	3,227,130 - 3,247,062 (+)	NCBI	ChiLan1.0	ChiLan1.0

CEP97
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	2	99,660,769 - 99,709,171 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	3	99,665,536 - 99,713,949 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	3	98,812,804 - 98,858,899 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	3	105,494,497 - 105,539,141 (+)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	3	105,494,497 - 105,536,308 (+)	Ensembl	panpan1.1		panPan2

CEP97
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	33	8,023,788 - 8,064,131 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	33	8,040,668 - 8,060,095 (+)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	33	8,177,212 - 8,218,683 (+)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	33	8,161,916 - 8,203,211 (+)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	33	8,179,806 - 8,201,378 (+)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	33	8,049,482 - 8,090,862 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	33	8,095,875 - 8,137,087 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	33	8,436,238 - 8,477,706 (+)	NCBI		UU_Cfam_GSD_1.0

Cep97
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024405602	148,788,944 - 148,836,496 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936630	1,715,155 - 1,734,444 (-)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936630	1,715,225 - 1,734,560 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

CEP97
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	13	157,356,253 - 157,388,411 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	13	157,356,248 - 157,388,425 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	13	166,846,046 - 166,864,860 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

CEP97
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	22	79,138,774 - 79,176,186 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	22	79,140,794 - 79,176,244 (-)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666041	87,355,355 - 87,421,257 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Cep97
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624789	15,508,484 - 15,532,599 (+)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624789	15,508,271 - 15,532,494 (+)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants in Cep97
81 total Variants

Predicted Target Of

	Summary Value
Count of predictions:	261
Count of miRNA genes:	157
Interacting mature miRNAs:	180
Transcripts:	ENSRNOT00000002191
Prediction methods:	Microtar, Miranda, Rnahybrid, Targetscan
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
1300147	Bp187	Blood pressure QTL 187	3.67		arterial blood pressure trait (VT:2000000)	blood pressure time series experimental set point of the baroreceptor response (CMO:0002593)	11	1	69446234	Rat
724554	Iddm17	Insulin dependent diabetes mellitus QTL 17		0.001	blood glucose amount (VT:0000188)	blood glucose level (CMO:0000046)	11	18976208	86241447	Rat
70180	BpQTLcluster10	Blood pressure QTL cluster 10	3.19		arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	11	34918041	79918041	Rat
8694376	Bw156	Body weight QTL 156	2.25	0.001	body lean mass (VT:0010483)	lean tissue morphological measurement (CMO:0002184)	11	23280456	68280456	Rat
10755497	Bp388	Blood pressure QTL 388	2.76		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	11	19456205	76331918	Rat
10058952	Gmadr6	Adrenal mass QTL 6	2.29	0.0072	adrenal gland mass (VT:0010420)	both adrenal glands wet weight to body weight ratio (CMO:0002411)	11	22959403	67959403	Rat
1300130	Rf20	Renal function QTL 20	4.44		kidney glomerulus integrity trait (VT:0010546)	kidney glomerulus diameter (CMO:0001166)	11	29528418	60324829	Rat
1558659	Tescar1	Testicular tumor resistance QTL 1	3.9		testis integrity trait (VT:0010572)	percentage of study population developing testis tumors during a period of time (CMO:0001261)	11	1041931	66113562	Rat
2298551	Neuinf10	Neuroinflammation QTL 10	3.7		nervous system integrity trait (VT:0010566)	spinal cord beta-2 microglobulin mRNA level (CMO:0002125)	11	31239134	78851519	Rat
1300135	Rf19	Renal function QTL 19	3.38		blood creatinine amount (VT:0005328)	creatinine clearance (CMO:0000765)	11	40946188	82566702	Rat
2312566	Glom20	Glomerulus QTL 20	3.6	0.001	kidney glomerulus morphology trait (VT:0005325)	index of glomerular damage (CMO:0001135)	11	44285759	82566702	Rat
724563	Uae10	Urinary albumin excretion QTL 10	6		urine albumin amount (VT:0002871)	urine albumin level (CMO:0000130)	11	27672410	82846715	Rat
9589032	Epfw10	Epididymal fat weight QTL 10	9.29	0.001	epididymal fat pad mass (VT:0010421)	epididymal fat pad weight to body weight ratio (CMO:0000658)	11	23280456	68280456	Rat
9590313	Scort20	Serum corticosterone level QTL 20	6.51	0.001	blood corticosterone amount (VT:0005345)	plasma corticosterone level (CMO:0001173)	11	23280456	68280456	Rat
8694424	Bw162	Body weight QTL 162	3.8	0.001	body lean mass (VT:0010483)	lean tissue morphological measurement (CMO:0002184)	11	23280456	68280456	Rat
1300110	Stl7	Serum triglyceride level QTL 7	4.64		blood triglyceride amount (VT:0002644)	plasma triglyceride level (CMO:0000548)	11	29528418	82566702	Rat
1641927	Alcrsp10	Alcohol response QTL 10			alcohol metabolism trait (VT:0015089)	blood ethanol level (CMO:0000535)	11	8436674	53436674	Rat

D11Rat8

Rat Assembly	Chr	Position (strand)	Source	JBrowse
Rnor_5.0	11	50,337,688 - 50,337,856	NCBI	Rnor5.0
Rnor_5.0	11	50,337,754 - 50,337,856	NCBI	Rnor5.0
RGSC_v3.4	11	45,668,787 - 45,669,106	RGD	RGSC3.4
RGSC_v3.4	11	45,668,853 - 45,669,016	UniSTS	RGSC3.4
RGSC_v3.1	11	45,726,442 - 45,726,605	RGD
RH 3.4 Map	11	331.4	UniSTS
RH 3.4 Map	11	331.4	RGD
RH 2.0 Map	11	300.2	RGD
SHRSP x BN Map	11	19.5499	RGD
Cytogenetic Map	11	q12	UniSTS

AW530468

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	11	44,711,232 - 44,711,382 (+)	MAPPER	mRatBN7.2
Rnor_6.0	11	47,174,222 - 47,174,371	NCBI	Rnor6.0
Rnor_5.0	11	50,355,035 - 50,355,184	UniSTS	Rnor5.0
RGSC_v3.4	11	45,686,851 - 45,687,000	UniSTS	RGSC3.4
Celera	11	44,462,370 - 44,462,519	UniSTS
RH 3.4 Map	11	332.5	UniSTS
Cytogenetic Map	11	q12	UniSTS

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

alimentary part of gastrointestinal system	appendage	circulatory system	ectoderm	endocrine system	endoderm	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	mesenchyme	mesoderm	nervous system	renal system	reproductive system	respiratory system
9	11	49	113	91	90	59	25	59	6	218	97	93	45	60	31


RefSeq Transcripts	NM_001107096	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006248250	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039088372	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039088373	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063270561	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_001840418	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	CH473967	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAXUCZ010000011	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSRNOT00000002191 ⟹ ENSRNOP00000002191

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	11	44,683,517 - 44,711,471 (+)	Ensembl
Rnor_6.0 Ensembl	11	47,146,308 - 47,174,713 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000099594 ⟹ ENSRNOP00000082014

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	11	44,683,506 - 44,692,917 (+)	Ensembl

RefSeq Acc Id:

NM_001107096 ⟹ NP_001100566

RefSeq Status:

PROVISIONAL

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	11	58,152,575 - 58,180,523 (+)	NCBI
mRatBN7.2	11	44,683,517 - 44,711,471 (+)	NCBI
Rnor_6.0	11	47,146,465 - 47,174,460 (+)	NCBI
Rnor_5.0	11	50,327,756 - 50,355,273 (+)	NCBI
RGSC_v3.4	11	45,658,903 - 45,687,089 (+)	RGD
Celera	11	44,434,493 - 44,462,608 (+)	RGD

Sequence:

show sequence

GACTACATGCTCTACAGAACGGCTGAGGACGGTTGCCGGGTGTCATTAGCAAGCGGCAAGTATGGCGGTGGCGCGAGTCGACGGGGCTTTGGCTCCGGGAGAAGGATCAGTGGTAAACTGGTCAGGGC
AGGGACTGCAGAAATTAGGGGCCAACTTGCCCTGTGATGCTGATGTTCACACATTGATTCTGGATAAAAATCAGATTATAAAACTGGAAAATCTGGAGAAATGCAAACAGTTAATACAGTTGTCAGTG
GCTAATAATCGCTTGGTTCGGATGATGGGTGTGGCCAAGCTGACTCAACTCCGAGTGTTAAATTTACCTCATAATAGTATTGGCTGCATGGAAGGGCTGAAGGACCTCGTCCATTTGGAGTGGCTGAA
TTTAGCGGGCAATAATCTGAAGACCATGGAGCAAATCAATAGCTGTTCAGCTCTGCAGCACCTTGATTTATCAGACAACAACATACCCCAGATAGGTGATGTATCGAAACTGACAGCTCTGAAGACCT
TGCTTTTACATGGAAATATCATCACTTCTCTCAGAATGGCACCTGCTTATCTACCCAGGAATCTTTCGATACTGTCTTTGGCAGAAAATGAAATCCGAGACTTAAATGAGATCTCATTTTTGGCCTCT
TTAAGTGAACTGGAACAGTTATCAATCATGAACAACCCTTGTGTGATGGCTACCCCGTCCATTCCAGGGTTTGACTATCGACCGTACATTGTCAGCTGGTGTCTGAATCTCAGAGTGCTGGACGGATA
TGTGATTTCTCAGAAGGAGAGTCTGAAGGCTGAATGGCTCTATAGTCAAGGCAAGGGGAGATCGTATCGACCTGGCCAGCATGTCCAGCTTGTCCAGTACCTGGCTACAGTTTGTCCTCTTATTTCTG
CCCTGGGTCTTCAGACTGCAGAGGATGCCAAACTGGAGAAGATTCTGAGCAAACAGAGGTTTCACCAGAGGCAGCTGATGAACCAGAGCCAGAATGAAGAGTTGTCTCCTATTGCTGCTGTTGAAACA
AGGGTGCCCCGTACACCTGAGTGTTCAAGCCCTGTGCAAGATTTCCAGGAAAGCGAACCTGTTCTCCAAATCAATTCTTGGGTTGGGAGCAGCAGTAATGATGATCAGTTATATGCTGTTAAGAATAA
CTTCCTAGCCACTACACATGCTACAAGATACTCTCGGAATGACCTTCACCTTGAAGACATACAGACAGACGAGGACAAGCTAAACTGTAGTCTGCTCTCTTCAGAGTCCACTTTTATGCCAGTTGCAT
CGGGGCTTTCTCCAGTGTCTCCCACTGTGGAGCTGAGGCTACAGGGCATTAACTTGGGCCTTGAGGATGATGATGGTACAGATGAATTCACGAAAGGACTGGAACACCAGGACTTGGATAAGGACAGG
GAGAAGTCTTTATGGGATTCAGATGTTCAAATGCTGAAACGTAAGATCAGCACAGAAGGAAATGAGGAAGCTGGGCTGCTACCTTGTCCCAAGTCATCGATCATCACTGCTCTCTTGAAGGAGGATAA
CCACAGTCTTACATCAGGTGGACACAGTGTGTCCCACACAGAACCAAACAGAGAAGAAGTCATGTCTCCCACCACTTCAGAGAAATTTCCCTGCAGGATTTTTACCCAGAGACCTGTTGCTTTGGGAC
AAGATAAAGTCACCCTTCAGAAACTGAATGCAGCTGCCACTAAGCTTCAGGCCTGTTGGCGAGGCTTTTATACCAGGAACTACAACCCACAAGCCAAAGGGGTACGCTATGAAATCCGGCTACGCAGA
ATGCAGGAGCACATTGTCTGCCTGACAGATGAAGTGCGGAGGTTAAGAAAAGAAAGAGATGAAGAACGTGTGAAGAATTTTGTGCAAGAGGAGGCTGTCAGGGTCCTTTGGAACGAGGTAAGGGCTCT
ACAGGCTTGGCAGCAGACAGTGGAACAGCGTCTAGTTTCCTGGCATTCTGATGTGCCTCCTATATCAAGTACTCTGGTGTCACCCAAGCCTCCGTTACTTCCACAACATCAGGACCCCTCTTCCGATC
AGAATTCGGATTGGCTCATTATTGAGGATGACGCTCCTCAAGAGAAATCAGTGCCGGACTTTCCCGACTCTGGTTTTCACTCCTCCCTGACAGAACAAGTTCACTGTTTGCAGGATTCTTTGGATTTT
GAAAAAAGTTCGGTAGAAAGCAGCGAAAACTCCGCGTTGGGGAATTCCGCTGACACAGTGAAATACGTCAAAGACCCAGACTCAGAGGCCACAGCTGAGGAGCACAGTGACTGCAGTAAGGAAAGCTC
CACCAGTGAGCAGGATAACACCCTGCTGCAGCAGTATTTAGCTTCAGTCCAGCAGCTGGATGACGCGGATGACAGGGCAGGTCCCGACGATATGGCGGGAGACAATAAGCGTCTCCTAGCTTGTTCTC
CGGAAAGGTTGGGTGCCTCTGACAGTGAGGCTCATAGAGCATCTCCTACTTTACAGGAGGAAATTAGCCAGACACCAGAGAATTGTAAGTTAAACGAGGAAGTCCAAGGGCAGCCTCCAGAATGTGAC
ACTGCATTTCAGGTGCTGCAAGTGGGTGTCACTGTGTAGCCTGTCTGATTAACTGGGAAGCAGAAATTCCCTTTGATTTTCTGTTTTCACTTTCTTTTTGCAGGGGAGCAACCCTGTACCCCATTTTG
TTATTCTTTAGCTACAACTTGTATTCTTGTCCCACAGTTTTTAGATATTAGCTGTTGAACTACGTATTCATTTTTGTTGTACTACTGTACTAAACAAAATATTAAAAGGAATATGCACTTTATCTCTC
A

hide sequence

RefSeq Acc Id:

XM_006248250 ⟹ XP_006248312

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	11	58,159,651 - 58,187,174 (+)	NCBI
mRatBN7.2	11	44,690,593 - 44,711,464 (+)	NCBI
Rnor_6.0	11	47,153,592 - 47,174,453 (+)	NCBI
Rnor_5.0	11	50,327,756 - 50,355,273 (+)	NCBI

Sequence:

show sequence

CTGCATGGAAGGGCTGAAGGACCTCGTCCATTTGGAGTGGCTGAATTTAGCGGGCAATAATCTG
AAGGTGAATGGCTTTCTTCTTGACCATGGAGCAAATCAATAGCTGTTCAGCTCTGCAGCACCTTGATTTATCAGACAACAACATACCCCAGATAGGTGATGTATCGAAACTGACAGCTCTGAAGACCT
TGCTTTTACATGGAAATATCATCACTTCTCTCAGAATGGCACCTGCTTATCTACCCAGGAATCTTTCGATACTGTCTTTGGCAGAAAATGAAATCCGAGACTTAAATGAGATCTCATTTTTGGCCTCT
TTAAGTGAACTGGAACAGTTATCAATCATGAACAACCCTTGTGTGATGGCTACCCCGTCCATTCCAGGGTTTGACTATCGACCGTACATTGTCAGCTGGTGTCTGAATCTCAGAGTGCTGGACGGATA
TGTGATTTCTCAGAAGGAGAGTCTGAAGGCTGAATGGCTCTATAGTCAAGGCAAGGGGAGATCGTATCGACCTGGCCAGCATGTCCAGCTTGTCCAGTACCTGGCTACAGTTTGTCCTCTTATTTCTG
CCCTGGGTCTTCAGACTGCAGAGGATGCCAAACTGGAGAAGATTCTGAGCAAACAGAGGTTTCACCAGAGGCAGCTGATGAACCAGAGCCAGAATGAAGAGTTGTCTCCTATTGCTGCTGTTGAAACA
AGGGTGCCCCGTACACCTGAGTGTTCAAGCCCTGTGCAAGATTTCCAGGAAAGCGAACCTGTTCTCCAAATCAATTCTTGGGTTGGGAGCAGCAGTAATGATGATCAGTTATATGCTGTTAAGAATAA
CTTCCTAGCCACTACACATGCTACAAGATACTCTCGGAATGACCTTCACCTTGAAGACATACAGACAGACGAGGACAAGCTAAACTGTAGTCTGCTCTCTTCAGAGTCCACTTTTATGCCAGTTGCAT
CGGGGCTTTCTCCAGTGTCTCCCACTGTGGAGCTGAGGCTACAGGGCATTAACTTGGGCCTTGAGGATGATGATGGTACAGATGAATTCACGAAAGGACTGGAACACCAGGACTTGGATAAGGACAGG
GAGAAGTCTTTATGGGATTCAGATGTTCAAATGCTGAAACGTAAGATCAGCACAGAAGGAAATGAGGAAGCTGGGCTGCTACCTTGTCCCAAGTCATCGATCATCACTGCTCTCTTGAAGGAGGATAA
CCACAGTCTTACATCAGGTGGACACAGTGTGTCCCACACAGAACCAAACAGAGAAGAAGTCATGTCTCCCACCACTTCAGAGAAATTTCCCTGCAGGATTTTTACCCAGAGACCTGTTGCTTTGGGAC
AAGATAAAGTCACCCTTCAGAAACTGAATGCAGCTGCCACTAAGCTTCAGGCCTGTTGGCGAGGCTTTTATACCAGGAACTACAACCCACAAGCCAAAGGGGTACGCTATGAAATCCGGCTACGCAGA
ATGCAGGAGCACATTGTCTGCCTGACAGATGAAGTGCGGAGGTTAAGAAAAGAAAGAGATGAAGAACGTGTGAAGAATTTTGTGCAAGAGGAGGCTGTCAGGGTCCTTTGGAACGAGGTAAGGGCTCT
ACAGGCTTGGCAGCAGACAGTGGAACAGCGTCTAGTTTCCTGGCATTCTGATGTGCCTCCTATATCAAGTACTCTGGTGTCACCCAAGCCTCCGTTACTTCCACAACATCAGGACCCCTCTTCCGATC
AGAATTCGGATTGGCTCATTATTGAGGATGACGCTCCTCAAGAGAAATCAGTGCCGGACTTTCCCGACTCTGGTTTTCACTCCTCCCTGACAGAACAAGTTCACTGTTTGCAGGATTCTTTGGATTTT
GAAAAAAGTTCGGTAGAAAGCAGCGAAAACTCCGCGTTGGGGAATTCCGCTGACACAGTGAAATACGTCAAAGACCCAGACTCAGAGGCCACAGCTGAGGAGCACAGTGACTGCAGTAAGGAAAGCTC
CACCAGTGAGCAGGATAACACCCTGCTGCAGCAGTATTTAGCTTCAGTCCAGCAGCTGGATGACGCGGATGACAGGGCAGGTCCCGACGATATGGCGGGAGACAATAAGCGTCTCCTAGCTTGTTCTC
CGGAAAGGTTGGGTGCCTCTGACAGTGAGGCTCATAGAGCATCTCCTACTTTACAGGAGGAAATTAGCCAGACACCAGAGAATTGTAAGTTAAACGAGGAAGTCCAAGGGCAGCCTCCAGAATGTGAC
ACTGCATTTCAGGTGCTGCAAGTGGGTGTCACTGTGTAGCCTGTCTGATTAACTGGGAAGCAGAAATTCCCTTTGATTTTCTGTTTTCACTTTCTTTTTGCAGGGGAGCAACCCTGTACCCCATTTTG
TTATTCTTTAGCTACAACTTGTATTCTTGTCCCACAGTTTTTAGATATTAGCTGTTGAACTACGTATTCATTTTTGTTGTACTACTGTACTAAACAAAATATTAAAAGGAATATGCACTTTA

hide sequence

RefSeq Acc Id:

XM_039088372 ⟹ XP_038944300

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	11	58,152,561 - 58,175,738 (+)	NCBI
mRatBN7.2	11	44,683,503 - 44,706,189 (+)	NCBI

RefSeq Acc Id:

XM_039088373 ⟹ XP_038944301

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	11	58,152,561 - 58,170,435 (+)	NCBI
mRatBN7.2	11	44,683,503 - 44,701,506 (+)	NCBI

RefSeq Acc Id:

XM_063270561 ⟹ XP_063126631

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	11	58,153,232 - 58,187,174 (+)	NCBI


Protein RefSeqs	NP_001100566	(Get FASTA)	NCBI Sequence Viewer
	XP_006248312	(Get FASTA)	NCBI Sequence Viewer
	XP_038944300	(Get FASTA)	NCBI Sequence Viewer
	XP_038944301	(Get FASTA)	NCBI Sequence Viewer
	XP_063126631	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	EDM11063	(Get FASTA)	NCBI Sequence Viewer
	EDM11064	(Get FASTA)	NCBI Sequence Viewer
	EDM11065	(Get FASTA)	NCBI Sequence Viewer
	EDM11066	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSRNOP00000002191
	ENSRNOP00000002191.2
	ENSRNOP00000082014.1

RefSeq Acc Id:

NP_001100566 ⟸ NM_001107096

- UniProtKB:

D4AC95 (UniProtKB/TrEMBL), A6IQR0 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MAVARVDGALAPGEGSVVNWSGQGLQKLGANLPCDADVHTLILDKNQIIKLENLEKCKQLIQLSVANNRLVRMMGVAKLTQLRVLNLPHNSIGCMEGLKDLVHLEWLNLAGNNLKTMEQINSCSALQH
LDLSDNNIPQIGDVSKLTALKTLLLHGNIITSLRMAPAYLPRNLSILSLAENEIRDLNEISFLASLSELEQLSIMNNPCVMATPSIPGFDYRPYIVSWCLNLRVLDGYVISQKESLKAEWLYSQGKGR
SYRPGQHVQLVQYLATVCPLISALGLQTAEDAKLEKILSKQRFHQRQLMNQSQNEELSPIAAVETRVPRTPECSSPVQDFQESEPVLQINSWVGSSSNDDQLYAVKNNFLATTHATRYSRNDLHLEDI
QTDEDKLNCSLLSSESTFMPVASGLSPVSPTVELRLQGINLGLEDDDGTDEFTKGLEHQDLDKDREKSLWDSDVQMLKRKISTEGNEEAGLLPCPKSSIITALLKEDNHSLTSGGHSVSHTEPNREEV
MSPTTSEKFPCRIFTQRPVALGQDKVTLQKLNAAATKLQACWRGFYTRNYNPQAKGVRYEIRLRRMQEHIVCLTDEVRRLRKERDEERVKNFVQEEAVRVLWNEVRALQAWQQTVEQRLVSWHSDVPP
ISSTLVSPKPPLLPQHQDPSSDQNSDWLIIEDDAPQEKSVPDFPDSGFHSSLTEQVHCLQDSLDFEKSSVESSENSALGNSADTVKYVKDPDSEATAEEHSDCSKESSTSEQDNTLLQQYLASVQQLD
DADDRAGPDDMAGDNKRLLACSPERLGASDSEAHRASPTLQEEISQTPENCKLNEEVQGQPPECDTAFQVLQVGVTV

hide sequence

RefSeq Acc Id:

XP_006248312 ⟸ XM_006248250

- Peptide Label:

isoform X2

- Sequence:

show sequence

MAFFLTMEQINSCSALQHLDLSDNNIPQIGDVSKLTALKTLLLHGNIITSLRMAPAYLPRNLSILSLAENEIRDLNEISFLASLSELEQLSIMNNPCVMATPSIPGFDYRPYIVSWCLNLRVLDGYVI
SQKESLKAEWLYSQGKGRSYRPGQHVQLVQYLATVCPLISALGLQTAEDAKLEKILSKQRFHQRQLMNQSQNEELSPIAAVETRVPRTPECSSPVQDFQESEPVLQINSWVGSSSNDDQLYAVKNNFL
ATTHATRYSRNDLHLEDIQTDEDKLNCSLLSSESTFMPVASGLSPVSPTVELRLQGINLGLEDDDGTDEFTKGLEHQDLDKDREKSLWDSDVQMLKRKISTEGNEEAGLLPCPKSSIITALLKEDNHS
LTSGGHSVSHTEPNREEVMSPTTSEKFPCRIFTQRPVALGQDKVTLQKLNAAATKLQACWRGFYTRNYNPQAKGVRYEIRLRRMQEHIVCLTDEVRRLRKERDEERVKNFVQEEAVRVLWNEVRALQA
WQQTVEQRLVSWHSDVPPISSTLVSPKPPLLPQHQDPSSDQNSDWLIIEDDAPQEKSVPDFPDSGFHSSLTEQVHCLQDSLDFEKSSVESSENSALGNSADTVKYVKDPDSEATAEEHSDCSKESSTS
EQDNTLLQQYLASVQQLDDADDRAGPDDMAGDNKRLLACSPERLGASDSEAHRASPTLQEEISQTPENCKLNEEVQGQPPECDTAFQVLQVGVTV

hide sequence

Ensembl Acc Id:

ENSRNOP00000002191 ⟸ ENSRNOT00000002191

RefSeq Acc Id:	XP_038944300 ⟸ XM_039088372
- Peptide Label:	isoform X3

RefSeq Acc Id:	XP_038944301 ⟸ XM_039088373
- Peptide Label:	isoform X4

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-D4AC95-F1-model_v2	AlphaFold	D4AC95	1-845	view protein structure

eQTL		View at Phenogen
WGCNA		View at Phenogen
Tissue/Strain Expression		View at Phenogen

Database	Acc Id	Source(s)
BioCyc Gene	G2FUF-21504	BioCyc
Ensembl Genes	ENSRNOG00000001609	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSRNOT00000002191	ENTREZGENE
	ENSRNOT00000002191.5	UniProtKB/TrEMBL
	ENSRNOT00000099594.1	UniProtKB/TrEMBL
Gene3D-CATH	3.80.10.10	UniProtKB/TrEMBL
InterPro	Cilia_flagella_integrity	UniProtKB/TrEMBL
	L_dom-like	UniProtKB/TrEMBL
	Leu-rich_rpt	UniProtKB/TrEMBL
KEGG Report	rno:304007	UniProtKB/TrEMBL
NCBI Gene	304007	ENTREZGENE
PANTHER	CENTROSOMAL PROTEIN OF 97 KDA	UniProtKB/TrEMBL
	PROTEIN PHOSPHATASE 1 REGULATORY SUBUNIT SDS22-RELATED	UniProtKB/TrEMBL
Pfam	LRR_1	UniProtKB/TrEMBL
	LRR_9	UniProtKB/TrEMBL
PhenoGen	Cep97	PhenoGen
PROSITE	LRR	UniProtKB/TrEMBL
	PS50096	UniProtKB/TrEMBL
RatGTEx	ENSRNOG00000001609	RatGTEx
SMART	LRR_SD22	UniProtKB/TrEMBL
Superfamily-SCOP	L domain-like	UniProtKB/TrEMBL
	Outer arm dynein light chain 1	UniProtKB/TrEMBL
UniProt	A0A8I5ZTA1_RAT	UniProtKB/TrEMBL
	A6IQR0	ENTREZGENE, UniProtKB/TrEMBL
	A6IQR3	ENTREZGENE, UniProtKB/TrEMBL
	D4AC95	ENTREZGENE, UniProtKB/TrEMBL

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2011-04-27	Cep97	centrosomal protein 97	Cep97	centrosomal protein 97kDa	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2008-09-29	Cep97	centrosomal protein 97kDa	Cep97	centrosomal protein 97	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2008-04-25	Cep97	centrosomal protein 97	Lrriq2_predicted	leucine-rich repeats and IQ motif containing 2 (predicted)	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2006-03-30	Lrriq2_predicted	leucine-rich repeats and IQ motif containing 2 (predicted)	RGD1307400_predicted	similar to RIKEN cDNA 2810403B08 (predicted)	Symbol and Name updated	1299863	APPROVED
2005-01-20	RGD1307400_predicted	similar to RIKEN cDNA 2810403B08 (predicted)	LOC304007_predicted		Symbol and Name status set to approved	1331353	APPROVED
2005-01-12	LOC304007_predicted	similar to RIKEN cDNA 2810403B08 (predicted)			Symbol and Name status set to provisional	70820	PROVISIONAL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailable


InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailable


Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
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Imported Disease Annotations - ClinVar