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ONTOLOGY REPORT - ANNOTATIONS

Term:lymphocyte differentiation
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Accession:GO:0030098 term browser browse the term
Definition:The process in which a relatively unspecialized precursor cell acquires specialized features of a lymphocyte. A lymphocyte is a leukocyte commonly found in the blood and lymph that has the characteristics of a large nucleus, a neutral staining cytoplasm, and prominent heterochromatin.
Comment:Note that immunologists typically use the word 'development' to refer to cells of B or T cell lineages undergoing the process that GO describes as 'cell differentiation'.
Synonyms:exact_synonym: lymphocyte cell differentiation;   lymphocytic blood cell differentiation
 related_synonym: lymphocyte development
 alt_id: GO:0046650


show annotations for term's descendants           Sort by:
lymphocyte differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cbfb core-binding factor subunit beta acts_upstream_of_or_within ISO MGI:1934195 (PMID:12434155) RGD PMID:12434155 NCBI chr19:33,049,162...33,092,752
Ensembl chr19:33,049,172...33,092,751 		JBrowse link
G Fbxo7 F-box protein 7 acts_upstream_of ISO MGI:4434927|MGI:95407 (PMID:21652635) RGD PMID:21652635 NCBI chr 7:19,696,951...19,725,180
Ensembl chr 7:17,809,231...17,837,530 		JBrowse link
G Flt3 Fms related receptor tyrosine kinase 3 acts_upstream_of_or_within ISO (PMID:12387740) RGD PMID:12387740 NCBI chr12:12,660,035...12,735,584
Ensembl chr12:7,623,930...7,699,474 		JBrowse link
G Flt3lg Fms related receptor tyrosine kinase 3 ligand acts_upstream_of_or_within ISO MGI:2158499 (PMID:12387740) RGD PMID:12387740 NCBI chr 1:95,615,056...95,620,463
Ensembl chr 1:95,609,370...95,620,463 		JBrowse link
G Ikzf1 IKAROS family zinc finger 1 involved_in ISO (PMID:17934067) RGD PMID:17934067 NCBI chr14:90,468,696...90,556,522
Ensembl chr14:86,255,065...86,342,416 		JBrowse link
G Il2rg interleukin 2 receptor subunit gamma acts_upstream_of ISO MGI:5544783 (PMID:23918385) RGD PMID:23918385 NCBI chr  X:66,395,330...66,399,026
Ensembl chr  X:66,392,542...66,399,823 		JBrowse link
G Ly6d lymphocyte antigen 6 family member D involved_in IBA
ISO		 GO_REF:0000033
(PMID:19833765)		 GO_Central
RGD		 PMID:19833765 GO_REF:0000033 NCBI chr 7:106,643,225...106,644,733
Ensembl chr 7:106,643,232...106,644,733 		JBrowse link
G Prkdc protein kinase, DNA-activated, catalytic subunit acts_upstream_of_or_within ISO MGI:1857113 (PMID:8133891) RGD PMID:8133891 NCBI chr11:98,544,952...98,762,499
Ensembl chr11:85,040,792...85,257,952 		JBrowse link
G Relb RELB proto-oncogene, NF-kB subunit involved_in ISO (PMID:26385063) RGD PMID:26385063 NCBI chr 1:88,385,717...88,413,380
Ensembl chr 1:79,257,725...79,285,507 		JBrowse link
G Spi1 Spi-1 proto-oncogene acts_upstream_of_or_within ISO (PMID:11980719) RGD PMID:11980719 NCBI chr 3:97,529,509...97,548,204
Ensembl chr 3:77,073,012...77,092,393 		JBrowse link
G Stat5a signal transducer and activator of transcription 5A acts_upstream_of ISO MGI:103035 (PMID:15294943) RGD PMID:15294943 NCBI chr10:86,285,859...86,310,187
Ensembl chr10:85,785,537...85,809,866 		JBrowse link
G Stat5b signal transducer and activator of transcription 5B acts_upstream_of ISO MGI:103036 (PMID:15294943) RGD PMID:15294943 NCBI chr10:86,205,148...86,276,178
Ensembl chr10:85,705,670...85,775,668 		JBrowse link
G Tcf3 transcription factor 3 acts_upstream_of_or_within ISO (PMID:18958875) RGD PMID:18958875 NCBI chr 7:9,931,251...9,952,994
Ensembl chr 7:9,280,571...9,302,314 		JBrowse link
G Tox thymocyte selection-associated high mobility group box acts_upstream_of_or_within ISO MGI:3773716 (PMID:20818394) RGD PMID:20818394 NCBI chr 5:24,672,487...24,968,754
Ensembl chr 5:19,874,467...20,171,272 		JBrowse link
alpha-beta T cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abl1 ABL proto-oncogene 1, non-receptor tyrosine kinase acts_upstream_of_or_within ISO MGI:87860 (PMID:18025176) RGD PMID:18025176 NCBI chr 3:35,377,587...35,480,843
Ensembl chr 3:14,979,853...15,083,065 		JBrowse link
G Abl2 ABL proto-oncogene 2, non-receptor tyrosine kinase acts_upstream_of_or_within ISO MGI:87859 (PMID:18025176) RGD PMID:18025176 NCBI chr13:71,223,902...71,319,770
Ensembl chr13:68,673,722...68,839,742 		JBrowse link
G Ada adenosine deaminase involved_in
acts_upstream_of		 IEA
ISO		 GO_REF:0000107
MGI:1857117 (PMID:11067867), (PMID:12163459), (PMID:16670300)		 Ensembl
RGD		 PMID:11067867 PMID:12163459 PMID:16670300 GO_REF:0000107 NCBI chr 3:172,818,174...172,842,283
Ensembl chr 3:152,398,747...152,447,088 		JBrowse link
G Anxa1 annexin A1 involved_in IEA
ISO		 GO_REF:0000107
(PMID:20139728)		 Ensembl
RGD		 PMID:20139728 GO_REF:0000107 NCBI chr 1:227,287,713...227,306,739
Ensembl chr 1:217,861,175...217,877,343 		JBrowse link
G Bcl11b BCL11 transcription factor B acts_upstream_of_or_within ISO MGI:2663971 (PMID:12717433) RGD PMID:12717433 NCBI chr 6:132,598,968...132,692,123
Ensembl chr 6:126,834,531...126,928,224 		JBrowse link
G Blm BLM RecQ like helicase acts_upstream_of_or_within ISO MGI:3053044|MGI:3663359 (PMID:17210642) RGD PMID:17210642 NCBI chr 1:143,819,072...143,905,300
Ensembl chr 1:134,409,857...134,484,312 		JBrowse link
G Braf B-Raf proto-oncogene, serine/threonine kinase acts_upstream_of_or_within ISO MGI:3711006 (PMID:23334952) RGD PMID:23334952 NCBI chr 4:69,329,772...69,476,931
Ensembl chr 4:68,384,649...68,510,463 		JBrowse link
G Gli3 GLI family zinc finger 3 acts_upstream_of_or_within ISO MGI:1856276 (PMID:15855276) RGD PMID:15855276 NCBI chr17:54,134,064...54,405,198
Ensembl chr17:49,438,567...49,709,712 		JBrowse link
G Lef1 lymphoid enhancer binding factor 1 acts_upstream_of_or_within ISO MGI:98507 (PMID:9462507) RGD PMID:9462507 NCBI chr 2:222,340,541...222,453,931
Ensembl chr 2:219,666,592...219,779,794 		JBrowse link
G Prr7 proline rich 7 (synaptic) involved_in ISO MGI:4399196 (PMID:27657535) RGD PMID:27657535 NCBI chr17:9,170,405...9,178,814
Ensembl chr17:9,165,269...9,172,536 		JBrowse link
G Ptcra pre T-cell antigen receptor alpha involved_in ISS
ISO		 GO_REF:0000024
(PMID:38422122)		 UniProt
RGD		 PMID:38422122 GO_REF:0000024 NCBI chr 9:14,218,907...14,229,141
Ensembl chr 9:14,218,802...14,229,235 		JBrowse link
G Rorc RAR-related orphan receptor C acts_upstream_of_or_within ISO MGI:3026635 (PMID:15247480) RGD PMID:15247480 NCBI chr 2:184,698,779...184,723,942
Ensembl chr 2:182,009,286...182,034,907 		JBrowse link
G Rpl22 ribosomal protein L22 acts_upstream_of_or_within ISO MGI:3804429 (PMID:17555992) RGD PMID:17555992 NCBI chr 5:168,114,432...168,126,114
Ensembl chr 5:162,833,740...162,843,368
Ensembl chr 7:162,833,740...162,843,368
Ensembl chr 4:162,833,740...162,843,368 		JBrowse link
G Shh sonic hedgehog signaling molecule involved_in
acts_upstream_of		 IEA
ISO		 GO_REF:0000107
(PMID:10981962)		 Ensembl
RGD		 PMID:10981962 GO_REF:0000107 NCBI chr 4:7,687,872...7,697,025
Ensembl chr 4:6,954,017...6,963,170 		JBrowse link
G Tcf7 transcription factor 7 acts_upstream_of_or_within ISO MGI:96770 (PMID:9462507) RGD PMID:9462507 NCBI chr10:36,924,363...36,954,279
Ensembl chr10:36,423,445...36,453,535 		JBrowse link
G Zap70 zeta chain of T cell receptor associated protein kinase 70 acts_upstream_of ISO MGI:2677447|MGI:3526403|MGI:99515 (PMID:7630421), (PMID:9208839), (PMID:9275205) RGD PMID:7630421 PMID:9208839 PMID:9275205 NCBI chr 9:46,485,605...46,507,552
Ensembl chr 9:38,989,750...39,011,700 		JBrowse link
alpha-beta T cell lineage commitment term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Rhoa ras homolog family member A involved_in ISO (PMID:25398325) RGD PMID:25398325 NCBI chr 8:117,870,548...117,904,303
Ensembl chr 8:108,991,954...109,025,746 		JBrowse link
B cell affinity maturation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Btk Bruton tyrosine kinase acts_upstream_of_or_within ISO MGI:1856317 (PMID:7680896) RGD PMID:7680896 NCBI chr  X:102,016,070...102,055,448
Ensembl chr  X:97,722,802...97,761,853 		JBrowse link
G Traf3ip2 Traf3 interacting protein 2 involved_in ISO MGI:3510784 (PMID:20543113) RGD PMID:20543113 NCBI chr20:44,565,992...44,609,240
Ensembl chr20:43,011,450...43,054,667 		JBrowse link
B cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adam17 ADAM metallopeptidase domain 17 involved_in ISO (PMID:17371977) RGD PMID:17371977 NCBI chr 6:46,601,583...46,663,690
Ensembl chr 6:40,872,856...40,920,639 		JBrowse link
G Adgrg3 adhesion G protein-coupled receptor G3 involved_in ISO (PMID:24113187) RGD PMID:24113187 NCBI chr19:9,978,450...10,007,145
Ensembl chr19:9,972,430...10,001,123 		JBrowse link
G Aqp8 aquaporin 8 involved_in ISS
ISO
IEA		 GO_REF:0000024
(PMID:27256569)
GO_REF:0000107		 UniProt
RGD
Ensembl		 PMID:27256569 GO_REF:0000024 GO_REF:0000107 NCBI chr 1:187,424,314...187,430,243
Ensembl chr 1:177,993,305...177,999,158 		JBrowse link
G Bcl11a BCL11 transcription factor A acts_upstream_of_or_within ISO MGI:2663941 (PMID:12717432) RGD PMID:12717432 NCBI chr14:102,230,147...102,325,289
Ensembl chr14:98,030,461...98,124,180 		JBrowse link
G Bcl2 BCL2, apoptosis regulator acts_upstream_of_or_within ISO MGI:2156165 (PMID:8170972), (PMID:9028316) RGD PMID:8170972 PMID:9028316 NCBI chr13:23,204,464...23,366,900
Ensembl chr13:22,684,989...22,853,743
Ensembl chr13:22,684,989...22,853,743 		JBrowse link
G Bcl6 BCL6, transcription repressor acts_upstream_of_or_within ISO MGI:88337 (PMID:14647274) RGD PMID:14647274 NCBI chr11:76,854,090...76,877,389
Ensembl chr11:76,854,090...76,877,389 		JBrowse link
G Card11 caspase recruitment domain family, member 11 acts_upstream_of_or_within ISO MGI:3045950 (PMID:12818158) RGD PMID:12818158 NCBI chr12:13,621,140...13,758,115
Ensembl chr12:13,621,087...13,758,112 		JBrowse link
G Cd40lg CD40 ligand involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:96556 (PMID:14647274)		 Ensembl
RGD		 PMID:14647274 GO_REF:0000107 NCBI chr  X:140,164,341...140,176,057
Ensembl chr  X:135,126,969...135,138,306 		JBrowse link
G Cd79a CD79a molecule involved_in IBA
ISO		 GO_REF:0000033
(PMID:11514602), (PMID:12097390)		 GO_Central
RGD		 PMID:11514602 PMID:12097390 GO_REF:0000033 NCBI chr 1:80,493,581...80,497,936
Ensembl chr 1:80,493,581...80,497,935 		JBrowse link
G Cd79b CD79b molecule involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr10:91,739,134...91,742,312
Ensembl chr10:91,239,356...91,242,625 		JBrowse link
G Cdh17 cadherin 17 involved_in ISO (PMID:15688343) RGD PMID:15688343 NCBI chr 5:30,024,544...30,112,226
Ensembl chr 5:25,262,758...25,314,884 		JBrowse link
G Cebpg CCAAT/enhancer binding protein gamma involved_in ISS
ISO		 GO_REF:0000024
(PMID:1431100)		 UniProt
RGD		 PMID:1431100 GO_REF:0000024 NCBI chr 1:96,820,981...96,829,736
Ensembl chr 1:87,684,019...87,694,569 		JBrowse link
G Clcf1 cardiotrophin-like cytokine factor 1 acts_upstream_of_or_within ISO (PMID:10500198) RGD PMID:10500198 NCBI chr 1:210,937,763...210,947,064
Ensembl chr 1:201,507,859...201,517,605 		JBrowse link
G Cr2 complement C3d receptor 2 involved_in ISO (PMID:2995485) RGD PMID:2995485 NCBI chr13:109,207,034...109,244,980
Ensembl chr13:106,685,413...106,716,235 		JBrowse link
G Dcaf1 DDB1 and CUL4 associated factor 1 involved_in ISO (PMID:22157821) RGD PMID:22157821 NCBI chr 8:107,466,229...107,540,633
Ensembl chr 8:107,474,312...107,540,627 		JBrowse link
G Dclre1c DNA cross-link repair 1C involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:2667614 (PMID:12504013)		 Ensembl
RGD		 PMID:12504013 GO_REF:0000107 NCBI chr17:79,684,988...79,718,399
Ensembl chr17:74,776,935...74,809,186 		JBrowse link
G Dnajb9 DnaJ heat shock protein family (Hsp40) member B9 involved_in ISS
ISO		 GO_REF:0000024
(PMID:25222125)		 UniProt
RGD		 PMID:25222125 GO_REF:0000024 NCBI chr 6:66,997,842...67,007,371
Ensembl chr 6:61,269,913...61,275,063 		JBrowse link
G Ep300 E1A binding protein p300 acts_upstream_of_or_within ISO MGI:3813243 (PMID:18684867) RGD PMID:18684867 NCBI chr 7:114,987,857...115,058,652
Ensembl chr 7:113,106,247...113,136,088
Ensembl chr 7:113,106,247...113,136,088 		JBrowse link
G Ezh2 enhancer of zeste 2 polycomb repressive complex 2 subunit involved_in ISO MGI:3624790 (PMID:23531880) RGD PMID:23531880 NCBI chr 4:77,624,223...77,698,598
Ensembl chr 4:76,624,399...76,687,362 		JBrowse link
G Flt3 Fms related receptor tyrosine kinase 3 involved_in IBA
ISO		 GO_REF:0000033
(PMID:21228325)		 GO_Central
RGD		 PMID:21228325 GO_REF:0000033 NCBI chr12:12,660,035...12,735,584
Ensembl chr12:7,623,930...7,699,474 		JBrowse link
G Flt3lg Fms related receptor tyrosine kinase 3 ligand involved_in ISO (PMID:38701783) RGD PMID:38701783 NCBI chr 1:95,615,056...95,620,463
Ensembl chr 1:95,609,370...95,620,463 		JBrowse link
G Fnip1 folliculin interacting protein 1 involved_in ISO (PMID:32905580) RGD PMID:32905580 NCBI chr10:39,068,432...39,151,552
Ensembl chr10:38,567,729...38,650,824 		JBrowse link
G Fosl2 FOS like 2, AP-1 transcription factor subunit involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:3521818 (PMID:28566276)		 Ensembl
RGD		 PMID:28566276 GO_REF:0000107 NCBI chr 6:30,017,952...30,039,269
Ensembl chr 6:24,300,956...24,320,034 		JBrowse link
G Fzd9 frizzled class receptor 9 acts_upstream_of_or_within ISO MGI:3526665 (PMID:15572594) RGD PMID:15572594 NCBI chr12:27,063,640...27,065,954
Ensembl chr12:21,427,084...21,429,398 		JBrowse link
G Gimap1 GTPase, IMAP family member 1 acts_upstream_of_or_within ISO MGI:2449947|MGI:4459837 (PMID:20194894) RGD PMID:20194894 NCBI chr 4:77,687,581...77,691,468
Ensembl chr 4:77,682,171...77,691,866 		JBrowse link
G Gon4l gon-4 like involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:4829629 (PMID:20530203)		 Ensembl
RGD		 PMID:20530203 GO_REF:0000107 NCBI chr 2:176,531,274...176,604,446
Ensembl chr 2:174,233,461...174,306,634 		JBrowse link
G Gps2 G protein pathway suppressor 2 involved_in ISO (PMID:28039360) RGD PMID:28039360 NCBI chr10:55,136,043...55,139,106
Ensembl chr10:54,637,455...54,640,650 		JBrowse link
G Hdac7 histone deacetylase 7 involved_in TAS PMID:12711221 UniProt PMID:12711221 RGD:8553516 NCBI chr 7:130,803,013...130,841,181
Ensembl chr 7:128,923,920...128,962,072 		JBrowse link
G Hhex hematopoietically expressed homeobox acts_upstream_of_or_within
involved_in		 ISO MGI:2449914 (PMID:12522149) RGD PMID:12522149 NCBI chr 1:244,602,945...244,608,532
Ensembl chr 1:235,190,455...235,196,042 		JBrowse link
G Hmga1 high mobility group AT-hook 1 acts_upstream_of_or_within ISO (PMID:32341372) RGD PMID:32341372 NCBI chr20:5,612,902...5,620,596
Ensembl chr20:5,611,694...5,618,752 		JBrowse link
G Id2 inhibitor of DNA binding 2 acts_upstream_of ISO MGI:2384134 (PMID:18523151) RGD PMID:18523151 NCBI chr 6:47,469,162...47,470,995
Ensembl chr 6:41,728,946...41,744,400 		JBrowse link
G Ighe immunoglobulin heavy constant epsilon involved_in ISO MGI:1316738|MGI:6195834 (PMID:28923960) RGD PMID:28923960
G Ighg1 immunoglobulin heavy constant gamma 1 involved_in ISO MGI:1316738|MGI:6195842 (PMID:28923960) RGD PMID:28923960 Ensembl chr 6:132,389,370...132,393,397 JBrowse link
G Igkc immunoglobulin kappa constant acts_upstream_of_or_within ISO MGI:3624131 (PMID:8080841) RGD PMID:8080841
G Ikzf1 IKAROS family zinc finger 1 acts_upstream_of_or_within ISO MGI:2158738 (PMID:23071339), (PMID:7923373) RGD PMID:7923373 PMID:23071339 NCBI chr14:90,468,696...90,556,522
Ensembl chr14:86,255,065...86,342,416 		JBrowse link
G Ikzf3 IKAROS family zinc finger 3 involved_in ISO (PMID:34155405) RGD PMID:34155405 NCBI chr10:83,956,850...84,049,861
Ensembl chr10:83,465,745...83,553,591 		JBrowse link
G Il2rg interleukin 2 receptor subunit gamma acts_upstream_of ISO MGI:2429736 (PMID:9252128) RGD PMID:9252128 NCBI chr  X:66,395,330...66,399,026
Ensembl chr  X:66,392,542...66,399,823 		JBrowse link
G Il9 interleukin 9 acts_upstream_of_or_within ISO MGI:96564 (PMID:30082831) RGD PMID:30082831 NCBI chr17:8,117,028...8,120,151
Ensembl chr17:8,111,772...8,114,895 		JBrowse link
G Il9r interleukin 9 receptor acts_upstream_of_or_within ISO MGI:96563 (PMID:30082831) RGD PMID:30082831 NCBI chr10:15,936,156...15,947,613
Ensembl chr10:15,431,706...15,441,990 		JBrowse link
G Jak3 Janus kinase 3 involved_in ISS
ISO		 GO_REF:0000024
(PMID:9498750)		 BHF-UCL
RGD		 PMID:9498750 GO_REF:0000024 NCBI chr16:18,418,807...18,432,515
Ensembl chr16:18,386,405...18,398,536 		JBrowse link
G Kit KIT proto-oncogene receptor tyrosine kinase involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr14:32,901,615...32,978,895
Ensembl chr14:32,548,877...32,624,652 		JBrowse link
G Lyl1 LYL1, basic helix-loop-helix family member involved_in ISS
ISO		 GO_REF:0000024
(PMID:16514064)		 UniProt
RGD		 PMID:16514064 GO_REF:0000024 NCBI chr19:40,356,967...40,359,834
Ensembl chr19:23,452,140...23,455,007 		JBrowse link
G Ms4a1 membrane spanning 4-domains A1 involved_in ISO (PMID:3925015) RGD PMID:3925015 NCBI chr 1:217,331,274...217,351,934
Ensembl chr 1:207,906,374...207,918,512 		JBrowse link
G Msh2 mutS homolog 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:1858055 (PMID:9697843)		 Ensembl
RGD		 PMID:9697843 GO_REF:0000107 NCBI chr 6:12,567,368...12,626,534
Ensembl chr 6:6,813,795...6,872,938 		JBrowse link
G Muc19 mucin 19, oligomeric acts_upstream_of_or_within ISO (PMID:37475871) RGD PMID:37475871 NCBI chr 7:124,897,424...125,018,582
Ensembl chr 7:123,017,896...123,139,053 		JBrowse link
G Myb MYB proto-oncogene, transcription factor acts_upstream_of_or_within ISO MGI:3047076 (PMID:17927961) RGD PMID:17927961 NCBI chr 1:17,759,309...17,793,306
Ensembl chr 1:15,939,761...15,973,057 		JBrowse link
G Nfam1 NFAT activating protein with ITAM motif 1 involved_in ISO (PMID:15143214) RGD PMID:15143214 NCBI chr 7:114,139,318...114,175,395
Ensembl chr 7:114,139,345...114,175,442 		JBrowse link
G Nhej1 nonhomologous end-joining factor 1 involved_in ISO
IEA
ISS		 (PMID:16439204)
GO_REF:0000107
GO_REF:0000024		 RGD
Ensembl
UniProt		 PMID:16439204 GO_REF:0000024 GO_REF:0000107 NCBI chr 9:83,974,995...84,071,161
Ensembl chr 9:76,526,324...76,622,444 		JBrowse link
G Nkx2-3 NK2 homeobox 3 acts_upstream_of_or_within ISO MGI:2448069 (PMID:12682228) RGD PMID:12682228 NCBI chr 1:242,478,130...242,481,083
Ensembl chr 1:242,478,130...242,481,083 		JBrowse link
G Ntrk1 neurotrophic receptor tyrosine kinase 1 acts_upstream_of_or_within ISO MGI:3505767 (PMID:15459109) RGD PMID:15459109 NCBI chr 2:175,534,844...175,551,664
Ensembl chr 2:173,236,963...173,253,770 		JBrowse link
G Onecut1 one cut homeobox 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:2179340 (PMID:12874218)		 Ensembl
RGD		 PMID:12874218 GO_REF:0000107 NCBI chr 8:84,480,066...84,507,848
Ensembl chr 8:75,599,740...75,627,277 		JBrowse link
G Pik3r1 phosphoinositide-3-kinase regulatory subunit 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:2149414 (PMID:9988280)		 Ensembl
RGD		 PMID:9988280 GO_REF:0000107 NCBI chr 2:34,612,946...34,697,660
Ensembl chr 2:32,882,032...32,963,631 		JBrowse link
G Plcg2 phospholipase C, gamma 2 involved_in ISO (PMID:10925250) RGD PMID:10925250 NCBI chr19:62,456,196...62,592,684
Ensembl chr19:45,547,416...45,683,930 		JBrowse link
G Polm DNA polymerase mu acts_upstream_of_or_within ISO MGI:2179233 (PMID:15789338) RGD PMID:15789338 NCBI chr14:84,921,039...84,930,649
Ensembl chr14:80,706,345...80,717,086 		JBrowse link
G Pou1f1 POU class 1 homeobox 1 acts_upstream_of_or_within ISO MGI:1856024 (PMID:9300691) RGD PMID:9300691 NCBI chr11:3,316,818...3,334,804
Ensembl chr11:3,317,058...3,334,801 		JBrowse link
G Ptpn2 protein tyrosine phosphatase, non-receptor type 2 involved_in ISS
ISO
IEA		 GO_REF:0000024
(PMID:9271584)
GO_REF:0000107		 UniProt
RGD
Ensembl		 PMID:9271584 GO_REF:0000024 GO_REF:0000107 NCBI chr18:63,498,890...63,564,571
Ensembl chr18:61,229,014...61,294,627 		JBrowse link
G Ptprc protein tyrosine phosphatase, receptor type, C acts_upstream_of_or_within
involved_in		 ISO MGI:1857277|MGI:2181288 (PMID:12902479), (PMID:8666928), (PMID:9254656)
(PMID:15557316), (PMID:18249142)		 RGD PMID:8666928 PMID:9254656 PMID:12902479 PMID:15557316 PMID:18249142 NCBI chr13:52,147,717...52,259,810
Ensembl chr13:49,596,193...49,708,692 		JBrowse link
G Ptprj protein tyrosine phosphatase, receptor type, J involved_in ISO (PMID:18249142) RGD PMID:18249142 NCBI chr 3:96,861,785...97,017,702
Ensembl chr 3:76,405,927...76,562,260 		JBrowse link
G Rabl3 RAB, member of RAS oncogene family-like 3 involved_in ISO (PMID:32220963) RGD PMID:32220963 NCBI chr11:63,153,281...63,182,240
Ensembl chr11:63,152,792...63,182,671 		JBrowse link
G Rag1 recombination activating 1 acts_upstream_of_or_within
involved_in		 ISO (PMID:11976687)
(PMID:1547488)		 RGD PMID:1547488 PMID:11976687 NCBI chr 3:108,372,087...108,383,184
Ensembl chr 3:87,917,004...87,928,291 		JBrowse link
G Rag2 recombination activating 2 acts_upstream_of_or_within
involved_in		 ISO MGI:1858556 (PMID:11980719), (PMID:14595002)
(PMID:1547487), (PMID:1547488)		 RGD PMID:1547487 PMID:1547488 PMID:11980719 PMID:14595002 NCBI chr 3:108,357,399...108,367,186
Ensembl chr 3:87,902,238...87,911,066 		JBrowse link
G Rbpj recombination signal binding protein for immunoglobulin kappa J region acts_upstream_of_or_within ISO MGI:3583755 (PMID:11967543) RGD PMID:11967543 NCBI chr14:61,551,366...61,736,220
Ensembl chr14:57,338,507...57,523,353 		JBrowse link
G Slc25a5 solute carrier family 25 member 5 involved_in ISS
ISO		 GO_REF:0000024
(PMID:25613378)		 UniProt
RGD		 PMID:25613378 GO_REF:0000024 NCBI chr  X:120,897,616...120,900,683
Ensembl chr  X:116,031,803...116,034,967 		JBrowse link
G Slc39a7 solute carrier family 39 member 7 involved_in ISO
IEA
ISS		 (PMID:30718914)
GO_REF:0000107
GO_REF:0000024		 RGD
Ensembl
UniProt		 PMID:30718914 GO_REF:0000024 GO_REF:0000107 NCBI chr20:4,824,967...4,828,431
Ensembl chr20:4,822,012...4,826,537 		JBrowse link
G Sp3 Sp3 transcription factor acts_upstream_of_or_within ISO MGI:2182438 (PMID:12676787) RGD PMID:12676787 NCBI chr 3:78,219,421...78,272,318
Ensembl chr 3:57,812,075...57,860,342 		JBrowse link
G Stat5a signal transducer and activator of transcription 5A acts_upstream_of ISO MGI:103035 (PMID:10979977) RGD PMID:10979977 NCBI chr10:86,285,859...86,310,187
Ensembl chr10:85,785,537...85,809,866 		JBrowse link
G Stat5b signal transducer and activator of transcription 5B involved_in
acts_upstream_of		 IEA
ISO		 GO_REF:0000107
MGI:103036 (PMID:10979977)		 Ensembl
RGD		 PMID:10979977 GO_REF:0000107 NCBI chr10:86,205,148...86,276,178
Ensembl chr10:85,705,670...85,775,668 		JBrowse link
G Syk spleen associated tyrosine kinase involved_in
acts_upstream_of		 IEA
ISO		 GO_REF:0000107
MGI:1857421|MGI:2384078 (PMID:7477352), (PMID:7477353)		 Ensembl
RGD		 PMID:7477352 PMID:7477353 GO_REF:0000107 NCBI chr17:12,756,493...12,830,927
Ensembl chr17:12,604,619...12,661,410 		JBrowse link
G Tcirg1 T-cell immune regulator 1, ATPase H+ transporting V0 subunit A3 acts_upstream_of_or_within ISO MGI:1856973|MGI:3054898 (PMID:15284856), (PMID:15294947), (PMID:16797412) RGD PMID:15284856 PMID:15294947 PMID:16797412 NCBI chr 1:210,556,270...210,568,021
Ensembl chr 1:201,127,034...201,138,742 		JBrowse link
G Tnfsf13b TNF superfamily member 13b involved_in
acts_upstream_of_or_within		 ISO MGI:2387426 (PMID:18624351)
(PMID:17581616)		 RGD PMID:17581616 PMID:18624351 NCBI chr16:86,164,377...86,195,072
Ensembl chr16:79,462,402...79,492,693 		JBrowse link
G Top2b DNA topoisomerase II beta involved_in ISO (PMID:31409799), (PMID:32128574) RGD PMID:31409799 PMID:32128574 NCBI chr15:9,051,340...9,111,721
Ensembl chr15:9,051,341...9,112,085 		JBrowse link
G Tpd52 tumor protein D52 involved_in ISO
IBA		 (PMID:15576473)
GO_REF:0000033		 RGD
GO_Central		 PMID:15576473 GO_REF:0000033 NCBI chr 2:94,642,514...94,723,442
Ensembl chr 2:92,735,620...92,816,622 		JBrowse link
G Tshr thyroid stimulating hormone receptor acts_upstream_of_or_within ISO MGI:1856914 (PMID:9300691) RGD PMID:9300691 NCBI chr 6:116,072,321...116,206,009
Ensembl chr 6:110,341,581...110,474,538 		JBrowse link
G Yy1 YY1 transcription factor involved_in ISO MGI:3624790 (PMID:23531880) RGD PMID:23531880 NCBI chr 6:133,471,615...133,500,875
Ensembl chr 6:127,707,596...127,732,747 		JBrowse link
G Zbtb1 zinc finger and BTB domain containing 1 acts_upstream_of_or_within ISO MGI:5300200 (PMID:22201126) RGD PMID:22201126 NCBI chr 6:100,832,506...100,864,019
Ensembl chr 6:95,096,387...95,118,996 		JBrowse link
G Zbtb7a zinc finger and BTB domain containing 7a involved_in IEA
ISO
ISS		 GO_REF:0000107
(PMID:17495164)
GO_REF:0000024		 Ensembl
RGD
UniProt		 PMID:17495164 GO_REF:0000024 GO_REF:0000107 NCBI chr 7:9,211,733...9,229,273
Ensembl chr 7:8,563,779...8,576,539 		JBrowse link
B cell lineage commitment term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bcl2 BCL2, apoptosis regulator involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:2156165 (PMID:8788039)		 Ensembl
RGD		 PMID:8788039 GO_REF:0000107 NCBI chr13:23,204,464...23,366,900
Ensembl chr13:22,684,989...22,853,743
Ensembl chr13:22,684,989...22,853,743 		JBrowse link
G Prkdc protein kinase, DNA-activated, catalytic subunit acts_upstream_of_or_within ISO MGI:1857113 (PMID:8788039) RGD PMID:8788039 NCBI chr11:98,544,952...98,762,499
Ensembl chr11:85,040,792...85,257,952 		JBrowse link
G Rag2 recombination activating 2 acts_upstream_of_or_within ISO MGI:1858556 (PMID:8788039) RGD PMID:8788039 NCBI chr 3:108,357,399...108,367,186
Ensembl chr 3:87,902,238...87,911,066 		JBrowse link
G Tcf3 transcription factor 3 involved_in ISO
ISS		 (PMID:15030778)
GO_REF:0000024		 RGD
UniProt		 PMID:15030778 GO_REF:0000024 NCBI chr 7:9,931,251...9,952,994
Ensembl chr 7:9,280,571...9,302,314 		JBrowse link
G Tp53 tumor protein p53 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:1857590 (PMID:8788039)		 Ensembl
RGD		 PMID:8788039 GO_REF:0000107 NCBI chr10:54,798,871...54,810,300
Ensembl chr10:54,300,048...54,311,524 		JBrowse link
B cell negative selection term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bak1 BCL2-antagonist/killer 1 acts_upstream_of_or_within ISO MGI:99702 (PMID:16055554) RGD PMID:16055554 NCBI chr20:5,102,334...5,111,615
Ensembl chr20:5,100,480...5,109,264 		JBrowse link
G Bax BCL2 associated X, apoptosis regulator acts_upstream_of_or_within ISO MGI:1097161 (PMID:16055554) RGD PMID:16055554 NCBI chr 1:105,076,472...105,081,906
Ensembl chr 1:95,938,808...95,945,368 		JBrowse link
B-1 B cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cd19 CD19 molecule involved_in ISO (PMID:7543183) RGD PMID:7543183 NCBI chr 1:190,417,853...190,424,494
Ensembl chr 1:180,987,286...180,993,975 		JBrowse link
G Malt1 MALT1 paracaspase acts_upstream_of_or_within ISO MGI:3639305 (PMID:14614861) RGD PMID:14614861 NCBI chr18:61,212,290...61,266,272
Ensembl chr18:58,942,299...58,994,260 		JBrowse link
B-1 B cell lineage commitment term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Slamf8 SLAM family member 8 involved_in ISO (PMID:11313408) RGD PMID:11313408 NCBI chr13:87,580,081...87,589,941
Ensembl chr13:85,047,727...85,057,211 		JBrowse link
B-1a B cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cmtm7 CKLF-like MARVEL transmembrane domain containing 7 acts_upstream_of_or_within ISO (PMID:24080084) RGD PMID:24080084 NCBI chr 8:123,326,233...123,353,148
Ensembl chr 8:114,448,042...114,474,621 		JBrowse link
G Dpp4 dipeptidylpeptidase 4 IMP RGD PMID:19327106 RGD:41408336 NCBI chr 3:67,370,794...67,452,422
Ensembl chr 3:46,962,243...47,043,901 		JBrowse link
G Nfatc1 nuclear factor of activated T-cells 1 acts_upstream_of_or_within ISO MGI:2181762 (PMID:14595020) RGD PMID:14595020 NCBI chr18:76,321,386...76,430,997
Ensembl chr18:74,046,904...74,156,028 		JBrowse link
G Plcl2 phospholipase C-like 2 acts_upstream_of_or_within ISO MGI:2679632 (PMID:14517301) RGD PMID:14517301 NCBI chr 9:3,292,564...3,477,009
Ensembl chr 9:3,292,695...3,477,009 		JBrowse link
beta selection term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Rhoa ras homolog family member A involved_in ISO (PMID:25398325) RGD PMID:25398325 NCBI chr 8:117,870,548...117,904,303
Ensembl chr 8:108,991,954...109,025,746 		JBrowse link
G Syk spleen associated tyrosine kinase involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:99613 (PMID:9275205)		 Ensembl
RGD		 PMID:9275205 GO_REF:0000107 NCBI chr17:12,756,493...12,830,927
Ensembl chr17:12,604,619...12,661,410 		JBrowse link
G Zap70 zeta chain of T cell receptor associated protein kinase 70 acts_upstream_of_or_within ISO MGI:99515 (PMID:9275205) RGD PMID:9275205 NCBI chr 9:46,485,605...46,507,552
Ensembl chr 9:38,989,750...39,011,700 		JBrowse link
CD4-positive or CD8-positive, alpha-beta T cell lineage commitment term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Braf B-Raf proto-oncogene, serine/threonine kinase acts_upstream_of_or_within ISO MGI:1857579 (PMID:18228248) RGD PMID:18228248 NCBI chr 4:69,329,772...69,476,931
Ensembl chr 4:68,384,649...68,510,463 		JBrowse link
G Cyld CYLD lysine 63 deubiquitinase acts_upstream_of_or_within ISO MGI:3664438 (PMID:16501569) RGD PMID:16501569 NCBI chr19:34,487,491...34,547,311
Ensembl chr19:18,314,019...18,373,658 		JBrowse link
G Shh sonic hedgehog signaling molecule involved_in ISS
ISO
IEA		 GO_REF:0000024
(PMID:17227833)
GO_REF:0000107		 UniProt
RGD
Ensembl		 PMID:17227833 GO_REF:0000024 GO_REF:0000107 NCBI chr 4:7,687,872...7,697,025
Ensembl chr 4:6,954,017...6,963,170 		JBrowse link
CD4-positive, alpha-beta T cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Armc5 armadillo repeat containing 5 acts_upstream_of_or_within ISO MGI:6098706 (PMID:28169274) RGD PMID:28169274 NCBI chr 1:192,250,580...192,257,347
Ensembl chr 1:182,820,141...182,826,907 		JBrowse link
G Braf B-Raf proto-oncogene, serine/threonine kinase acts_upstream_of_or_within ISO MGI:3711006 (PMID:23334952) RGD PMID:23334952 NCBI chr 4:69,329,772...69,476,931
Ensembl chr 4:68,384,649...68,510,463 		JBrowse link
G Cd83 CD83 molecule acts_upstream_of ISO MGI:3055293 (PMID:15322158) RGD PMID:15322158 NCBI chr17:21,093,281...21,113,223
Ensembl chr17:20,887,309...20,907,083 		JBrowse link
G Foxp3 forkhead box P3 acts_upstream_of ISO (PMID:17028180) RGD PMID:17028180 NCBI chr  X:17,580,380...17,601,181
Ensembl chr  X:14,908,494...14,923,838 		JBrowse link
G Gimap1 GTPase, IMAP family member 1 acts_upstream_of_or_within ISO MGI:2449947|MGI:4459837 (PMID:20194894) RGD PMID:20194894 NCBI chr 4:77,687,581...77,691,468
Ensembl chr 4:77,682,171...77,691,866 		JBrowse link
G Nkx2-3 NK2 homeobox 3 acts_upstream_of_or_within ISO MGI:2448069 (PMID:10926756) RGD PMID:10926756 NCBI chr 1:242,478,130...242,481,083
Ensembl chr 1:242,478,130...242,481,083 		JBrowse link
G Pax1 paired box 1 acts_upstream_of_or_within ISO MGI:3603176 (PMID:16093716) RGD PMID:16093716 NCBI chr 3:155,244,961...155,254,836
Ensembl chr 3:134,789,182...134,801,636 		JBrowse link
G Rsad2 radical S-adenosyl methionine domain containing 2 involved_in IEA
ISO
ISS		 GO_REF:0000107
(PMID:19047684)
GO_REF:0000024		 Ensembl
RGD
UniProt		 PMID:19047684 GO_REF:0000024 GO_REF:0000107 NCBI chr 6:48,774,985...48,788,245
Ensembl chr 6:43,047,658...43,059,699 		JBrowse link
G Sash3 SAM and SH3 domain containing 3 acts_upstream_of ISO MGI:3716944 (PMID:16227612) RGD PMID:16227612 NCBI chr  X:132,204,717...132,219,421
Ensembl chr  X:127,326,859...127,341,519 		JBrowse link
G Satb1 SATB homeobox 1 acts_upstream_of_or_within ISO MGI:2386676 (PMID:10716941) RGD PMID:10716941 NCBI chr 9:4,916,958...5,010,359
Ensembl chr 9:4,680,920...4,753,251 		JBrowse link
CD4-positive, alpha-beta T cell lineage commitment term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ctsl cathepsin L involved_in ISS
ISO		 GO_REF:0000024
(PMID:9545226)		 UniProt
RGD		 PMID:9545226 GO_REF:0000024 NCBI chr17:770,104...776,266
Ensembl chr17:764,309...770,548 		JBrowse link
G Tox thymocyte selection-associated high mobility group box involved_in ISO (PMID:18195075) RGD PMID:18195075 NCBI chr 5:24,672,487...24,968,754
Ensembl chr 5:19,874,467...20,171,272 		JBrowse link
CD4-positive, CD25-positive, alpha-beta regulatory T cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Foxp3 forkhead box P3 involved_in
acts_upstream_of		 ISO (PMID:22079196)
MGI:1857034|MGI:3696705 (PMID:16275384), (PMID:16301745), (PMID:18573908)		 RGD PMID:16275384 PMID:16301745 PMID:18573908 PMID:22079196 NCBI chr  X:17,580,380...17,601,181
Ensembl chr  X:14,908,494...14,923,838 		JBrowse link
G Fut7 fucosyltransferase 7 acts_upstream_of_or_within ISO MGI:2387664 (PMID:18573908) RGD PMID:18573908 NCBI chr 3:28,635,913...28,640,407
Ensembl chr 3:8,239,384...8,242,260 		JBrowse link
G Il2rg interleukin 2 receptor subunit gamma acts_upstream_of ISO MGI:1857455 (PMID:16227984) RGD PMID:16227984 NCBI chr  X:66,395,330...66,399,026
Ensembl chr  X:66,392,542...66,399,823 		JBrowse link
G Ncor1 nuclear receptor co-repressor 1 acts_upstream_of_or_within ISO MGI:2677822 (PMID:11030619) RGD PMID:11030619 NCBI chr10:47,498,852...47,641,612
Ensembl chr10:46,999,536...47,141,032 		JBrowse link
G Pla2g2d phospholipase A2, group IID acts_upstream_of_or_within ISO (PMID:19564598) RGD PMID:19564598 NCBI chr 5:156,299,374...156,305,816
Ensembl chr 5:151,018,870...151,022,525 		JBrowse link
CD4-positive, CD25-positive, alpha-beta regulatory T cell lineage commitment term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tox thymocyte selection-associated high mobility group box involved_in ISO (PMID:18195075) RGD PMID:18195075 NCBI chr 5:24,672,487...24,968,754
Ensembl chr 5:19,874,467...20,171,272 		JBrowse link
CD8-positive, alpha-beta intraepithelial T cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gpr18 G protein-coupled receptor 18 acts_upstream_of_or_within ISO MGI:5708707 (PMID:25348153) RGD PMID:25348153 NCBI chr15:98,997,427...99,001,177
Ensembl chr15:98,997,259...99,001,470 		JBrowse link
CD8-positive, alpha-beta T cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gimap1 GTPase, IMAP family member 1 acts_upstream_of_or_within ISO MGI:2449947|MGI:4459837 (PMID:20194894) RGD PMID:20194894 NCBI chr 4:77,687,581...77,691,468
Ensembl chr 4:77,682,171...77,691,866 		JBrowse link
G Irf1 interferon regulatory factor 1 acts_upstream_of_or_within ISO MGI:1857205 (PMID:11359801) RGD PMID:11359801 NCBI chr10:38,417,935...38,424,946
Ensembl chr10:37,916,670...37,924,166 		JBrowse link
G Otud5 OTU deubiquitinase 5 acts_upstream_of_or_within ISO MGI:2386448|MGI:5752247 (PMID:25470037) RGD PMID:25470037 NCBI chr  X:17,296,750...17,331,257
Ensembl chr  X:14,626,164...14,659,573 		JBrowse link
G Pax1 paired box 1 acts_upstream_of_or_within ISO MGI:3603176 (PMID:16093716) RGD PMID:16093716 NCBI chr 3:155,244,961...155,254,836
Ensembl chr 3:134,789,182...134,801,636 		JBrowse link
G Psmb11 proteasome subunit beta 11 acts_upstream_of_or_within ISO MGI:3716870 (PMID:17540904), (PMID:31915251) RGD PMID:17540904 PMID:31915251 NCBI chr15:32,054,747...32,055,666 JBrowse link
G Satb1 SATB homeobox 1 acts_upstream_of_or_within ISO MGI:2386676 (PMID:10716941), (PMID:15814699) RGD PMID:10716941 PMID:15814699 NCBI chr 9:4,916,958...5,010,359
Ensembl chr 9:4,680,920...4,753,251 		JBrowse link
G Tnfsf8 TNF superfamily member 8 involved_in
acts_upstream_of_or_within		 IBA
ISO		 GO_REF:0000033
MGI:3054968 (PMID:16177108)		 GO_Central
RGD		 PMID:16177108 GO_REF:0000033 NCBI chr 5:82,266,436...82,292,858
Ensembl chr 5:77,251,373...77,277,421 		JBrowse link
CD8-positive, alpha-beta T cell differentiation involved in immune response term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Eomes eomesodermin involved_in ISO
IBA		 (PMID:17566017)
(PMID:14605368)
GO_REF:0000033		 RGD
GO_Central		 PMID:14605368 PMID:17566017 GO_REF:0000033 NCBI chr 8:127,059,215...127,067,070
Ensembl chr 8:118,181,777...118,188,316 		JBrowse link
G Ifng interferon gamma acts_upstream_of_or_within ISO (PMID:17277142) RGD PMID:17277142 NCBI chr 7:55,789,180...55,793,216
Ensembl chr 7:53,903,337...53,907,375 		JBrowse link
CD8-positive, alpha-beta T cell lineage commitment term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bcl2 BCL2, apoptosis regulator involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:2156165 (PMID:8170972)		 Ensembl
RGD		 PMID:8170972 GO_REF:0000107 NCBI chr13:23,204,464...23,366,900
Ensembl chr13:22,684,989...22,853,743
Ensembl chr13:22,684,989...22,853,743 		JBrowse link
G Tox thymocyte selection-associated high mobility group box involved_in ISO (PMID:11850626), (PMID:15078895) RGD PMID:11850626 PMID:15078895 NCBI chr 5:24,672,487...24,968,754
Ensembl chr 5:19,874,467...20,171,272 		JBrowse link
CD8-positive, gamma-delta intraepithelial T cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ccr9 C-C motif chemokine receptor 9 acts_upstream_of_or_within ISO MGI:3654108 (PMID:25348153) RGD PMID:25348153 NCBI chr 8:132,273,581...132,287,651
Ensembl chr 8:123,395,813...123,413,969 		JBrowse link
G Gpr18 G protein-coupled receptor 18 acts_upstream_of_or_within ISO MGI:5708707 (PMID:25348153) RGD PMID:25348153 NCBI chr15:98,997,427...99,001,177
Ensembl chr15:98,997,259...99,001,470 		JBrowse link
G Klrc1 killer cell lectin like receptor C1 involved_in ISO (PMID:18064301) RGD PMID:18064301 NCBI chr 4:164,828,163...164,838,446
Ensembl chr 4:163,147,189...163,152,425 		JBrowse link
cytotoxic T cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cd8a CD8 subunit alpha involved_in
acts_upstream_of_or_within		 IBA
ISO		 GO_REF:0000033
MGI:1857149 (PMID:1673361)		 GO_Central
RGD		 PMID:1673361 GO_REF:0000033 NCBI chr 4:104,924,116...104,928,353
Ensembl chr 4:103,365,804...103,370,040 		JBrowse link
DN2 thymocyte differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ccr6 C-C motif chemokine receptor 6 involved_in ISO (PMID:24638065) RGD PMID:24638065 NCBI chr 1:55,022,037...55,055,857
Ensembl chr 1:52,474,168...52,498,603 		JBrowse link
G Lig4 DNA ligase 4 acts_upstream_of_or_within ISO MGI:1857732 (PMID:10911993), (PMID:9823897) RGD PMID:9823897 PMID:10911993 NCBI chr16:86,220,345...86,228,930
Ensembl chr16:79,518,312...79,527,040 		JBrowse link
G Rag2 recombination activating 2 acts_upstream_of_or_within ISO MGI:1858556 (PMID:9875844) RGD PMID:9875844 NCBI chr 3:108,357,399...108,367,186
Ensembl chr 3:87,902,238...87,911,066 		JBrowse link
G Xrcc4 X-ray repair cross complementing 4 acts_upstream_of_or_within ISO MGI:1926771 (PMID:9875844) RGD PMID:9875844 NCBI chr 2:22,686,506...22,932,929
Ensembl chr 2:20,951,200...21,197,808 		JBrowse link
DN3 thymocyte differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ccr6 C-C motif chemokine receptor 6 involved_in ISO (PMID:24638065) RGD PMID:24638065 NCBI chr 1:55,022,037...55,055,857
Ensembl chr 1:52,474,168...52,498,603 		JBrowse link
DN4 thymocyte differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abl1 ABL proto-oncogene 1, non-receptor tyrosine kinase acts_upstream_of_or_within ISO MGI:87860 (PMID:18025176) RGD PMID:18025176 NCBI chr 3:35,377,587...35,480,843
Ensembl chr 3:14,979,853...15,083,065 		JBrowse link
G Abl2 ABL proto-oncogene 2, non-receptor tyrosine kinase acts_upstream_of_or_within ISO MGI:87859 (PMID:18025176) RGD PMID:18025176 NCBI chr13:71,223,902...71,319,770
Ensembl chr13:68,673,722...68,839,742 		JBrowse link
G Blm BLM RecQ like helicase acts_upstream_of_or_within ISO MGI:3053044|MGI:3663359 (PMID:17210642) RGD PMID:17210642 NCBI chr 1:143,819,072...143,905,300
Ensembl chr 1:134,409,857...134,484,312 		JBrowse link
G Nfatc3 nuclear factor of activated T-cells 3 involved_in ISS
ISO		 GO_REF:0000024
(PMID:17579027)		 UniProt
RGD		 PMID:17579027 GO_REF:0000024 NCBI chr19:50,870,464...50,944,992
Ensembl chr19:33,960,852...34,035,150 		JBrowse link
extrathymic T cell selection term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Btnl3 butyrophilin-like 3 involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr20:4,474,056...4,489,024
Ensembl chr20:4,474,056...4,489,024 		JBrowse link
G Il15 interleukin 15 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:2136897 (PMID:10704459)		 Ensembl
RGD		 PMID:10704459 GO_REF:0000107 NCBI chr19:42,536,160...42,611,349
Ensembl chr19:25,640,251...25,706,820 		JBrowse link
follicular B cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Irf8 interferon regulatory factor 8 involved_in ISO UniProtKB:P17433 (PMID:31000603) RGD PMID:31000603 NCBI chr19:65,699,284...65,721,066
Ensembl chr19:48,790,588...48,811,829 		JBrowse link
G Muc19 mucin 19, oligomeric acts_upstream_of_or_within ISO (PMID:37475871) RGD PMID:37475871 NCBI chr 7:124,897,424...125,018,582
Ensembl chr 7:123,017,896...123,139,053 		JBrowse link
G Plcg2 phospholipase C, gamma 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:2386100 (PMID:12928432)		 Ensembl
RGD		 PMID:12928432 GO_REF:0000107 NCBI chr19:62,456,196...62,592,684
Ensembl chr19:45,547,416...45,683,930 		JBrowse link
G Spi1 Spi-1 proto-oncogene involved_in ISO UniProtKB:P23611 (PMID:31000603) RGD PMID:31000603 NCBI chr 3:97,529,509...97,548,204
Ensembl chr 3:77,073,012...77,092,393 		JBrowse link
gamma-delta T cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Jag2 jagged canonical Notch ligand 2 involved_in IEA
ISO		 GO_REF:0000107
(PMID:10383933)		 Ensembl
RGD		 PMID:10383933 GO_REF:0000107 NCBI chr 6:137,804,133...137,826,738
Ensembl chr 6:131,983,056...132,005,818 		JBrowse link
G Lck LCK proto-oncogene, Src family tyrosine kinase acts_upstream_of ISO MGI:1857211 (PMID:7807014) RGD PMID:7807014 NCBI chr 5:147,172,642...147,201,267
Ensembl chr 5:141,888,326...141,903,794 		JBrowse link
G Ptprc protein tyrosine phosphatase, receptor type, C acts_upstream_of ISO MGI:2181288 (PMID:7807014) RGD PMID:7807014 NCBI chr13:52,147,717...52,259,810
Ensembl chr13:49,596,193...49,708,692 		JBrowse link
G Sox13 SRY-box transcription factor 13 involved_in ISO (PMID:17218525), (PMID:30413363) RGD PMID:17218525 PMID:30413363 NCBI chr13:47,383,145...47,427,572
Ensembl chr13:44,831,085...44,875,762 		JBrowse link
G Stat5a signal transducer and activator of transcription 5A acts_upstream_of ISO MGI:103035 (PMID:15294943) RGD PMID:15294943 NCBI chr10:86,285,859...86,310,187
Ensembl chr10:85,785,537...85,809,866 		JBrowse link
G Stat5b signal transducer and activator of transcription 5B involved_in
acts_upstream_of		 IEA
ISO		 GO_REF:0000107
MGI:103036 (PMID:15294943)		 Ensembl
RGD		 PMID:15294943 GO_REF:0000107 NCBI chr10:86,205,148...86,276,178
Ensembl chr10:85,705,670...85,775,668 		JBrowse link
G Syk spleen associated tyrosine kinase involved_in
acts_upstream_of		 IEA
ISO		 GO_REF:0000107
MGI:1857421|MGI:2384078 (PMID:7477352), (PMID:8790395)		 Ensembl
RGD		 PMID:7477352 PMID:8790395 GO_REF:0000107 NCBI chr17:12,756,493...12,830,927
Ensembl chr17:12,604,619...12,661,410 		JBrowse link
G Tcf7 transcription factor 7 involved_in ISO (PMID:30413363) RGD PMID:30413363 NCBI chr10:36,924,363...36,954,279
Ensembl chr10:36,423,445...36,453,535 		JBrowse link
germinal center B cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ada adenosine deaminase involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:1857117|MGI:2683027 (PMID:14607964)		 Ensembl
RGD		 PMID:14607964 GO_REF:0000107 NCBI chr 3:172,818,174...172,842,283
Ensembl chr 3:152,398,747...152,447,088 		JBrowse link
G Cdh17 cadherin 17 involved_in ISO (PMID:15688343) RGD PMID:15688343 NCBI chr 5:30,024,544...30,112,226
Ensembl chr 5:25,262,758...25,314,884 		JBrowse link
G Il21 interleukin 21 involved_in ISS
ISO		 GO_REF:0000024
(PMID:23045607)		 UniProt
RGD		 PMID:23045607 GO_REF:0000024 NCBI chr 2:122,045,240...122,055,142
Ensembl chr 2:120,119,444...120,126,996 		JBrowse link
G Il6 interleukin 6 involved_in ISS
ISO		 GO_REF:0000024
(PMID:23045607)		 UniProt
RGD		 PMID:23045607 GO_REF:0000024 NCBI chr 4:5,889,999...5,894,575
Ensembl chr 4:5,213,394...5,219,178 		JBrowse link
G Irf8 interferon regulatory factor 8 involved_in ISO UniProtKB:P17433 (PMID:31000603) RGD PMID:31000603 NCBI chr19:65,699,284...65,721,066
Ensembl chr19:48,790,588...48,811,829 		JBrowse link
G Itfg2 integrin alpha FG-GAP repeat containing 2 acts_upstream_of_or_within ISO MGI:4235940 (PMID:23997217) RGD PMID:23997217 NCBI chr 4:161,684,249...161,698,315
Ensembl chr 4:161,684,249...161,698,422 		JBrowse link
G Phf14 PHD finger protein 14 involved_in ISO (PMID:33035772) RGD PMID:33035772 NCBI chr 4:40,975,897...41,162,043
Ensembl chr 4:40,009,264...40,195,885 		JBrowse link
G Pou2af1 POU class 2 homeobox associating factor 1 involved_in ISO (PMID:23045607) RGD PMID:23045607 NCBI chr 8:60,418,173...60,445,176
Ensembl chr 8:51,474,015...51,548,819 		JBrowse link
G Spi1 Spi-1 proto-oncogene involved_in ISO UniProtKB:P23611 (PMID:31000603) RGD PMID:31000603 NCBI chr 3:97,529,509...97,548,204
Ensembl chr 3:77,073,012...77,092,393 		JBrowse link
immature B cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fnip1 folliculin interacting protein 1 involved_in
acts_upstream_of_or_within		 ISS
ISO		 GO_REF:0000024
MGI:5437714 (PMID:22608497)		 UniProt
RGD		 PMID:22608497 GO_REF:0000024 NCBI chr10:39,068,432...39,151,552
Ensembl chr10:38,567,729...38,650,824 		JBrowse link
G Irf2bp2 interferon regulatory factor 2 binding protein 2 involved_in ISO (PMID:27016798) RGD PMID:27016798 NCBI chr19:71,456,689...71,462,368
Ensembl chr19:54,560,128...54,566,642 		JBrowse link
G Kit KIT proto-oncogene receptor tyrosine kinase involved_in ISO (PMID:15067126) RGD PMID:15067126 NCBI chr14:32,901,615...32,978,895
Ensembl chr14:32,548,877...32,624,652 		JBrowse link
G Prkdc protein kinase, DNA-activated, catalytic subunit acts_upstream_of_or_within ISO MGI:2383951 (PMID:9768755) RGD PMID:9768755 NCBI chr11:98,544,952...98,762,499
Ensembl chr11:85,040,792...85,257,952 		JBrowse link
G Spi1 Spi-1 proto-oncogene involved_in ISO UniProtKB:O35906 (PMID:28062693) RGD PMID:28062693 NCBI chr 3:97,529,509...97,548,204
Ensembl chr 3:77,073,012...77,092,393 		JBrowse link
G Spib Spi-B transcription factor involved_in ISO UniProtKB:P17433 (PMID:28062693) RGD PMID:28062693 NCBI chr 1:95,018,939...95,024,804
Ensembl chr 1:95,018,947...95,024,780 		JBrowse link
G Syvn1 synoviolin 1 involved_in ISO (PMID:29907570) RGD PMID:29907570 NCBI chr 1:203,339,235...203,346,137
Ensembl chr 1:203,339,619...203,346,152 		JBrowse link
immature T cell proliferation in thymus term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Blm BLM RecQ like helicase acts_upstream_of ISO MGI:3053044|MGI:3663359 (PMID:17210642) RGD PMID:17210642 NCBI chr 1:143,819,072...143,905,300
Ensembl chr 1:134,409,857...134,484,312 		JBrowse link
G Clec4g C-type lectin domain family 4, member G acts_upstream_of ISO MGI:5510586 (PMID:23487419) RGD PMID:23487419 NCBI chr12:6,578,266...6,582,913
Ensembl chr12:1,780,371...1,784,985 		JBrowse link
G Erbb2 erb-b2 receptor tyrosine kinase 2 involved_in
acts_upstream_of		 IEA
ISO		 GO_REF:0000107
(PMID:16230479)		 Ensembl
RGD		 PMID:16230479 GO_REF:0000107 NCBI chr10:83,907,491...83,931,365
Ensembl chr10:83,411,313...83,435,078 		JBrowse link
G Foxp3 forkhead box P3 acts_upstream_of ISO MGI:1857034 (PMID:16230479) RGD PMID:16230479 NCBI chr  X:17,580,380...17,601,181
Ensembl chr  X:14,908,494...14,923,838 		JBrowse link
G Ifnar2 interferon alpha and beta receptor subunit 2 acts_upstream_of_or_within ISO (PMID:11154225) RGD PMID:11154225 NCBI chr11:44,099,574...44,131,941
Ensembl chr11:30,613,767...30,668,124 		JBrowse link
G Ripk2 receptor-interacting serine-threonine kinase 2 acts_upstream_of ISO MGI:2660793 (PMID:11894098) RGD PMID:11894098 NCBI chr 5:34,428,573...34,459,808
Ensembl chr 5:29,631,570...29,662,657 		JBrowse link
G Wnt4 Wnt family member 4 acts_upstream_of_or_within
involved_in		 ISO
IEA		 MGI:1857453 (PMID:18617424)
GO_REF:0000107		 RGD
Ensembl		 PMID:18617424 GO_REF:0000107 NCBI chr 5:154,797,245...154,818,565
Ensembl chr 5:149,514,018...149,532,859 		JBrowse link
marginal zone B cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bcl3 BCL3, transcription coactivator acts_upstream_of_or_within ISO MGI:1861796 (PMID:9009202) RGD PMID:9009202 NCBI chr 1:88,599,321...88,613,555
Ensembl chr 1:79,471,369...79,485,607 		JBrowse link
G Cdh17 cadherin 17 involved_in ISO (PMID:15688343) RGD PMID:15688343 NCBI chr 5:30,024,544...30,112,226
Ensembl chr 5:25,262,758...25,314,884 		JBrowse link
G Dll1 delta like canonical Notch ligand 1 involved_in ISS
ISO
IEA		 GO_REF:0000024
(PMID:15146182), (PMID:19217325)
GO_REF:0000107		 UniProt
RGD
Ensembl		 PMID:15146182 PMID:19217325 GO_REF:0000024 GO_REF:0000107 NCBI chr 1:64,985,161...64,993,274
Ensembl chr 1:56,312,066...56,320,179 		JBrowse link
G Dock10 dedicator of cytokinesis 10 involved_in ISO (PMID:25729399) RGD PMID:25729399 NCBI chr 9:89,291,936...89,549,871
Ensembl chr 9:81,843,604...82,101,525 		JBrowse link
G Dock11 dedicator of cytokinesis 11 involved_in ISO (PMID:25729399) RGD PMID:25729399 NCBI chr  X:119,997,523...120,180,643
Ensembl chr  X:115,131,909...115,314,854 		JBrowse link
G Lfng LFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase involved_in ISS
ISO
IEA		 GO_REF:0000024
(PMID:19217325)
GO_REF:0000107		 UniProt
RGD
Ensembl		 PMID:19217325 GO_REF:0000024 GO_REF:0000107 NCBI chr12:19,144,474...19,152,951
Ensembl chr12:14,018,333...14,039,008 		JBrowse link
G Mfng MFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase involved_in ISO (PMID:19217325) RGD PMID:19217325 NCBI chr 7:112,191,288...112,209,129
Ensembl chr 7:110,310,812...110,328,653 		JBrowse link
G Notch2 notch receptor 2 involved_in ISS
ISO
IEA		 GO_REF:0000024
(PMID:19217325)
GO_REF:0000107		 UniProt
RGD
Ensembl		 PMID:19217325 GO_REF:0000024 GO_REF:0000107 NCBI chr 2:188,299,336...188,432,823
Ensembl chr 2:185,610,589...185,744,088 		JBrowse link
G Ptk2b protein tyrosine kinase 2 beta involved_in ISS
ISO		 GO_REF:0000024
(PMID:10881171)		 UniProt
RGD		 PMID:10881171 GO_REF:0000024 NCBI chr15:44,536,275...44,656,754
Ensembl chr15:40,360,723...40,481,282 		JBrowse link
mature B cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Il2rg interleukin 2 receptor subunit gamma acts_upstream_of ISO MGI:5544783 (PMID:23918385) RGD PMID:23918385 NCBI chr  X:66,395,330...66,399,026
Ensembl chr  X:66,392,542...66,399,823 		JBrowse link
G Pou2f2 POU class 2 homeobox 2 acts_upstream_of_or_within ISO MGI:3028896 (PMID:8096198) RGD PMID:8096198 NCBI chr 1:89,810,153...89,897,560
Ensembl chr 1:80,685,741...80,724,261 		JBrowse link
mature B cell differentiation involved in immune response term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G C10h17orf99 similar to human chromosome 17 open reading frame 99 involved_in ISO (PMID:28978694) RGD PMID:28978694 NCBI chr10:103,015,371...103,027,407
Ensembl chr10:103,016,505...103,027,407 		JBrowse link
G Gpr183 G protein-coupled receptor 183 involved_in ISO (PMID:19597478) RGD PMID:19597478 NCBI chr15:105,445,129...105,457,192
Ensembl chr15:99,036,367...99,050,559 		JBrowse link
G Rag2 recombination activating 2 IMP RGD PMID:30206106 RGD:38508903 NCBI chr 3:108,357,399...108,367,186
Ensembl chr 3:87,902,238...87,911,066 		JBrowse link
memory B cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G St3gal1 ST3 beta-galactoside alpha-2,3-sialyltransferase 1 involved_in ISO (PMID:10755614) RGD PMID:10755614 NCBI chr 7:100,734,300...100,802,443
Ensembl chr 7:98,845,270...98,913,236 		JBrowse link
memory T cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tsc1 TSC complex subunit 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:2656240 (PMID:25271321)		 Ensembl
RGD		 PMID:25271321 GO_REF:0000107 NCBI chr 3:32,367,434...32,416,565
Ensembl chr 3:11,979,729...12,015,674 		JBrowse link
natural killer cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Axl Axl receptor tyrosine kinase involved_in
acts_upstream_of_or_within		 IBA
ISO		 GO_REF:0000033
MGI:104294|MGI:96965 (PMID:16751775)		 GO_Central
RGD		 PMID:16751775 GO_REF:0000033 NCBI chr 1:90,392,864...90,424,123
Ensembl chr 1:81,265,088...81,296,265 		JBrowse link
G Flt3lg Fms related receptor tyrosine kinase 3 ligand acts_upstream_of
involved_in		 ISO MGI:2158499 (PMID:14607906)
(PMID:38701783)		 RGD PMID:14607906 PMID:38701783 NCBI chr 1:95,615,056...95,620,463
Ensembl chr 1:95,609,370...95,620,463 		JBrowse link
G Hectd1 HECT domain E3 ubiquitin protein ligase 1 acts_upstream_of_or_within ISO MGI:2137552 (PMID:24855001) RGD PMID:24855001 NCBI chr 6:74,916,803...75,003,408
Ensembl chr 6:69,181,436...69,268,053 		JBrowse link
G Id2 inhibitor of DNA binding 2 acts_upstream_of_or_within ISO MGI:2384134|MGI:98510 (PMID:17452521) RGD PMID:17452521 NCBI chr 6:47,469,162...47,470,995
Ensembl chr 6:41,728,946...41,744,400 		JBrowse link
G Ikzf1 IKAROS family zinc finger 1 acts_upstream_of_or_within ISO MGI:2158738 (PMID:7923373) RGD PMID:7923373 NCBI chr14:90,468,696...90,556,522
Ensembl chr14:86,255,065...86,342,416 		JBrowse link
G Il11ra1 interleukin 11 receptor subunit alpha 1 acts_upstream_of_or_within ISO MGI:2177774 (PMID:15499555) RGD PMID:15499555 NCBI chr 5:61,727,650...61,737,265
Ensembl chr 5:56,935,516...56,941,408 		JBrowse link
G Il15 interleukin 15 involved_in
acts_upstream_of		 IEA
ISO		 GO_REF:0000107
MGI:2136897 (PMID:14607906)		 Ensembl
RGD		 PMID:14607906 GO_REF:0000107 NCBI chr19:42,536,160...42,611,349
Ensembl chr19:25,640,251...25,706,820 		JBrowse link
G Il15ra interleukin 15 receptor subunit alpha acts_upstream_of ISO MGI:1934016 (PMID:14607906) RGD PMID:14607906 NCBI chr17:71,712,141...71,742,072
Ensembl chr17:66,802,334...66,832,278 		JBrowse link
G Il21 interleukin 21 acts_upstream_of ISO (PMID:14764669) RGD PMID:14764669 NCBI chr 2:122,045,240...122,055,142
Ensembl chr 2:120,119,444...120,126,996 		JBrowse link
G Kat7 lysine acetyltransferase 7 involved_in ISS
ISO		 GO_REF:0000024
(PMID:27733580)		 UniProt
RGD		 PMID:27733580 GO_REF:0000024 NCBI chr10:80,718,335...80,752,387
Ensembl chr10:80,221,524...80,255,567 		JBrowse link
G Kctd9 potassium channel tetramerization domain containing 9 acts_upstream_of_or_within ISO (PMID:31024568) RGD PMID:31024568 NCBI chr15:46,117,211...46,145,258
Ensembl chr15:41,942,381...41,969,862 		JBrowse link
G Mertk MER proto-oncogene, tyrosine kinase acts_upstream_of_or_within ISO MGI:104294|MGI:1347244 (PMID:16751775) RGD PMID:16751775 NCBI chr 3:136,391,936...136,498,366
Ensembl chr 3:115,939,351...116,046,554 		JBrowse link
G Nfil3 nuclear factor, interleukin 3 regulated involved_in ISS
ISO		 GO_REF:0000024
(PMID:32190943)		 UniProt
RGD		 PMID:32190943 GO_REF:0000024 NCBI chr17:12,432,376...12,447,605
Ensembl chr17:12,280,484...12,295,858 		JBrowse link
G Pbx1 PBX homeobox 1 involved_in ISO (PMID:32190943) RGD PMID:32190943 NCBI chr13:82,811,664...83,121,447
Ensembl chr13:80,278,770...80,588,594 		JBrowse link
G Ptprc protein tyrosine phosphatase, receptor type, C involved_in ISO (PMID:15557316) RGD PMID:15557316 NCBI chr13:52,147,717...52,259,810
Ensembl chr13:49,596,193...49,708,692 		JBrowse link
G Rabl3 RAB, member of RAS oncogene family-like 3 involved_in ISO (PMID:32220963) RGD PMID:32220963 NCBI chr11:63,153,281...63,182,240
Ensembl chr11:63,152,792...63,182,671 		JBrowse link
G Slamf1 signaling lymphocytic activation molecule family member 1 involved_in ISO (PMID:18031695) RGD PMID:18031695 NCBI chr13:86,802,708...86,837,890
Ensembl chr13:84,270,316...84,305,497 		JBrowse link
G Slamf6 SLAM family member 6 involved_in ISO (PMID:18031695) RGD PMID:18031695 NCBI chr13:86,916,956...86,937,697
Ensembl chr13:84,383,742...84,405,300 		JBrowse link
G Sp3 Sp3 transcription factor acts_upstream_of_or_within ISO MGI:2182438 (PMID:12676787) RGD PMID:12676787 NCBI chr 3:78,219,421...78,272,318
Ensembl chr 3:57,812,075...57,860,342 		JBrowse link
G Stat5a signal transducer and activator of transcription 5A acts_upstream_of_or_within ISO MGI:103035 (PMID:10072077)
MGI:1857249 (PMID:9841920)		 RGD PMID:9841920 PMID:10072077 NCBI chr10:86,285,859...86,310,187
Ensembl chr10:85,785,537...85,809,866 		JBrowse link
G Stat5b signal transducer and activator of transcription 5B involved_in
acts_upstream_of
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:2181592 (PMID:9841920)
MGI:103036 (PMID:10072077)		 Ensembl
RGD		 PMID:9841920 PMID:10072077 GO_REF:0000107 NCBI chr10:86,205,148...86,276,178
Ensembl chr10:85,705,670...85,775,668 		JBrowse link
G Tcf3 transcription factor 3 acts_upstream_of_or_within ISO MGI:96397 (PMID:17452521) RGD PMID:17452521 NCBI chr 7:9,931,251...9,952,994
Ensembl chr 7:9,280,571...9,302,314 		JBrowse link
G Tox thymocyte selection-associated high mobility group box involved_in ISO (PMID:21126536) RGD PMID:21126536 NCBI chr 5:24,672,487...24,968,754
Ensembl chr 5:19,874,467...20,171,272 		JBrowse link
G Tusc2 tumor suppressor 2, mitochondrial calcium regulator acts_upstream_of_or_within ISO MGI:103014|MGI:3706236 (PMID:17318811) RGD PMID:17318811 NCBI chr 8:117,115,479...117,118,697
Ensembl chr 8:108,236,838...108,240,056 		JBrowse link
G Tyro3 TYRO3 protein tyrosine kinase involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:1347244|MGI:96965 (PMID:16751775)		 Ensembl
RGD		 PMID:16751775 GO_REF:0000107 NCBI chr 3:127,231,468...127,254,806
Ensembl chr 3:106,777,635...106,797,142 		JBrowse link
G Zfp683 zinc finger protein 683 acts_upstream_of_or_within ISO MGI:4276801 (PMID:22885984) RGD PMID:22885984 NCBI chr 5:146,277,972...146,285,856
Ensembl chr 5:146,278,978...146,285,000 		JBrowse link
negative regulation of alpha-beta T cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gli3 GLI family zinc finger 3 involved_in ISO (PMID:19667090) RGD PMID:19667090 NCBI chr17:54,134,064...54,405,198
Ensembl chr17:49,438,567...49,709,712 		JBrowse link
G Ihh Indian hedgehog signaling molecule involved_in ISO (PMID:19109233) RGD PMID:19109233 NCBI chr 9:83,952,986...83,959,203
Ensembl chr 9:76,504,315...76,510,532 		JBrowse link
G Shh sonic hedgehog signaling molecule involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
(PMID:10981962)		 Ensembl
RGD		 PMID:10981962 GO_REF:0000107 NCBI chr 4:7,687,872...7,697,025
Ensembl chr 4:6,954,017...6,963,170 		JBrowse link
negative regulation of B cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Flt3 Fms related receptor tyrosine kinase 3 acts_upstream_of_or_within ISO (PMID:16618805) RGD PMID:16618805 NCBI chr12:12,660,035...12,735,584
Ensembl chr12:7,623,930...7,699,474 		JBrowse link
G Hmgb3 high mobility group box 3 acts_upstream_of_or_within ISO (PMID:12714519) RGD PMID:12714519 NCBI chr  X:154,341,106...154,346,087
Ensembl chr  X:149,296,375...149,301,292 		JBrowse link
G Id2 inhibitor of DNA binding 2 acts_upstream_of_or_within ISO MGI:2384134 (PMID:18523151) RGD PMID:18523151 NCBI chr 6:47,469,162...47,470,995
Ensembl chr 6:41,728,946...41,744,400 		JBrowse link
G Sfrp1 secreted frizzled-related protein 1 involved_in ISO
IEA		 (PMID:18941195)
GO_REF:0000107		 RGD
Ensembl		 PMID:18941195 GO_REF:0000107 NCBI chr16:75,278,325...75,316,736
Ensembl chr16:68,575,763...68,614,286 		JBrowse link
negative regulation of CD4-positive, alpha-beta T cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cbfb core-binding factor subunit beta involved_in ISO (PMID:18258917) RGD PMID:18258917 NCBI chr19:33,049,162...33,092,752
Ensembl chr19:33,049,172...33,092,751 		JBrowse link
G Hmgb1 high mobility group box 1 involved_in ISO (PMID:22473704) RGD PMID:22473704 NCBI chr12:11,009,236...11,015,941
Ensembl chr12:5,901,586...5,978,565
Ensembl chr16:5,901,586...5,978,565 		JBrowse link
G Runx1 RUNX family transcription factor 1 involved_in ISS
ISO		 GO_REF:0000024
(PMID:18258917)		 UniProt
RGD		 PMID:18258917 GO_REF:0000024 NCBI chr11:45,325,778...45,560,300
Ensembl chr11:31,843,764...32,074,542 		JBrowse link
G Runx3 RUNX family transcription factor 3 involved_in ISO (PMID:18258917) RGD PMID:18258917 NCBI chr 5:152,644,270...152,702,835
Ensembl chr 5:147,360,994...147,419,156 		JBrowse link
negative regulation of CD8-positive, alpha-beta T cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Slc4a2 solute carrier family 4 member 2 involved_in ISS
ISO		 GO_REF:0000024
(PMID:24515893)		 UniProt
RGD		 PMID:24515893 GO_REF:0000024 NCBI chr 4:11,628,860...11,646,961
Ensembl chr 4:10,736,425...10,752,965 		JBrowse link
G Socs1 suppressor of cytokine signaling 1 involved_in IEA
ISO
ISS		 GO_REF:0000107
(PMID:24880459)
GO_REF:0000024		 Ensembl
RGD
UniProt		 PMID:24880459 GO_REF:0000024 GO_REF:0000107 NCBI chr10:5,389,574...5,391,265
Ensembl chr10:4,882,560...4,884,383 		JBrowse link
G Zbtb7b zinc finger and BTB domain containing 7B involved_in ISO (PMID:22730529), (PMID:24880459) RGD PMID:22730529 PMID:24880459 NCBI chr 2:177,093,569...177,111,894
Ensembl chr 2:174,797,453...174,814,236 		JBrowse link
negative regulation of cytotoxic T cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lilrb4 leukocyte immunoglobulin like receptor B4 involved_in ISO (PMID:16493035) RGD PMID:16493035 NCBI chr 1:78,847,685...78,853,294
Ensembl chr 1:69,805,250...69,810,660 		JBrowse link
negative regulation of immature T cell proliferation in thymus term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmp4 bone morphogenetic protein 4 involved_in IEA
ISS
ISO		 GO_REF:0000107
GO_REF:0000024
(PMID:12421925)		 Ensembl
UniProt
RGD		 PMID:12421925 GO_REF:0000024 GO_REF:0000107 NCBI chr15:22,098,191...22,113,145
Ensembl chr15:19,618,542...19,623,306 		JBrowse link
G Cdkn2a cyclin-dependent kinase inhibitor 2A involved_in ISO (PMID:15964995) RGD PMID:15964995 NCBI chr 5:109,100,763...109,114,448
Ensembl chr 5:103,984,949...104,003,149 		JBrowse link
G Clec4g C-type lectin domain family 4, member G acts_upstream_of_or_within ISO MGI:5510586 (PMID:23487419) RGD PMID:23487419 NCBI chr12:6,578,266...6,582,913
Ensembl chr12:1,780,371...1,784,985 		JBrowse link
G Erbb2 erb-b2 receptor tyrosine kinase 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
(PMID:16230479)		 Ensembl
RGD		 PMID:16230479 GO_REF:0000107 NCBI chr10:83,907,491...83,931,365
Ensembl chr10:83,411,313...83,435,078 		JBrowse link
G Ihh Indian hedgehog signaling molecule involved_in ISO (PMID:19109233) RGD PMID:19109233 NCBI chr 9:83,952,986...83,959,203
Ensembl chr 9:76,504,315...76,510,532 		JBrowse link
G Tmem131l transmembrane 131 like involved_in ISO (PMID:23690469) RGD PMID:23690469 NCBI chr 2:171,555,673...171,689,774
Ensembl chr 2:169,258,289...169,391,711 		JBrowse link
negative regulation of lymphocyte differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fbxo7 F-box protein 7 acts_upstream_of_or_within ISO MGI:4434927|MGI:95407 (PMID:21652635) RGD PMID:21652635 NCBI chr 7:19,696,951...19,725,180
Ensembl chr 7:17,809,231...17,837,530 		JBrowse link
negative regulation of memory T cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fgl2 fibrinogen-like 2 acts_upstream_of_or_within ISO MGI:3582343 (PMID:29341118) RGD PMID:29341118 NCBI chr 4:14,602,762...14,608,405
Ensembl chr 4:13,710,575...13,716,207 		JBrowse link
G Ifnl1 interferon, lambda 1 involved_in ISO (PMID:19346497) RGD PMID:19346497 NCBI chr 1:92,926,184...92,927,830
Ensembl chr 1:83,798,703...83,800,235 		JBrowse link
negative regulation of natural killer cell differentiation involved in immune response term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pglyrp1 peptidoglycan recognition protein 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:2670590 (PMID:20709292)		 Ensembl
RGD		 PMID:20709292 GO_REF:0000107 NCBI chr 1:87,659,863...87,665,048
Ensembl chr 1:78,531,815...78,537,001 		JBrowse link
G Pglyrp2 peptidoglycan recognition protein 2 acts_upstream_of_or_within ISO MGI:5297105 (PMID:20709292) RGD PMID:20709292 NCBI chr 7:12,069,414...12,082,437
Ensembl chr 7:11,418,880...11,427,773 		JBrowse link
G Pglyrp3 peptidoglycan recognition protein 3 acts_upstream_of_or_within ISO MGI:5297106 (PMID:20709292) RGD PMID:20709292 NCBI chr 2:180,174,931...180,186,007
Ensembl chr 2:177,477,407...177,490,736
Ensembl chr 2:177,477,407...177,490,736 		JBrowse link
G Pglyrp4 peptidoglycan recognition protein 4 acts_upstream_of_or_within ISO MGI:5297107 (PMID:20709292) RGD PMID:20709292 NCBI chr 2:178,500,238...178,669,328
Ensembl chr 2:176,218,519...176,242,251 		JBrowse link
negative regulation of plasma cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bcl6 BCL6, transcription repressor acts_upstream_of_or_within ISO MGI:2158439 (PMID:15240705) RGD PMID:15240705 NCBI chr11:76,854,090...76,877,389
Ensembl chr11:76,854,090...76,877,389 		JBrowse link
negative regulation of positive thymic T cell selection term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ptpn2 protein tyrosine phosphatase, non-receptor type 2 involved_in ISS
ISO
IEA		 GO_REF:0000024
(PMID:22080863)
GO_REF:0000107		 UniProt
RGD
Ensembl		 PMID:22080863 GO_REF:0000024 GO_REF:0000107 NCBI chr18:63,498,890...63,564,571
Ensembl chr18:61,229,014...61,294,627 		JBrowse link
negative regulation of pre-B cell receptor expression term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Laptm5 lysosomal protein transmembrane 5 involved_in ISO (PMID:22949502) RGD PMID:22949502 NCBI chr 5:148,371,880...148,393,927
Ensembl chr 5:143,087,759...143,109,807 		JBrowse link
negative regulation of regulatory T cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cd44 CD44 molecule involved_in ISO (PMID:25065622) RGD PMID:25065622 NCBI chr 3:109,610,824...109,699,776
Ensembl chr 3:89,157,058...89,244,620 		JBrowse link
G Ctla4 cytotoxic T-lymphocyte-associated protein 4 involved_in ISO
IBA		 (PMID:18641304)
GO_REF:0000033		 RGD
GO_Central		 PMID:18641304 GO_REF:0000033 NCBI chr 9:69,812,859...69,819,959
Ensembl chr 9:62,319,312...62,324,963 		JBrowse link
G Hspb1 heat shock protein family B (small) member 1 IMP RGD PMID:30287503 RGD:38549580 NCBI chr12:26,430,640...26,432,301
Ensembl chr12:20,794,028...20,795,743 		JBrowse link
G Irf1 interferon regulatory factor 1 involved_in ISS
ISO		 GO_REF:0000024
(PMID:18641303)		 UniProt
RGD		 PMID:18641303 GO_REF:0000024 NCBI chr10:38,417,935...38,424,946
Ensembl chr10:37,916,670...37,924,166 		JBrowse link
G Lag3 lymphocyte activating 3 involved_in ISS
ISO		 GO_REF:0000024
(PMID:15485628)		 UniProt
RGD		 PMID:15485628 GO_REF:0000024 NCBI chr 4:159,398,930...159,407,001
Ensembl chr 4:157,712,667...157,720,404 		JBrowse link
G Mdk midkine involved_in ISO
IEA
ISS		 (PMID:22323540)
GO_REF:0000107
GO_REF:0000024		 RGD
Ensembl
UniProt		 PMID:22323540 GO_REF:0000024 GO_REF:0000107 NCBI chr 3:98,356,789...98,358,960
Ensembl chr 3:77,901,158...77,903,130 		JBrowse link
G Mir21 microRNA 21 involved_in ISO RNAcentral:URS0000338542_9606 (PMID:22387553) RGD PMID:22387553 NCBI chr10:71,902,600...71,902,691
Ensembl chr10:71,405,257...71,405,348 		JBrowse link
G Mir30b microRNA 30b involved_in ISO RNAcentral:URS000039ED8D_9606 (PMID:22387553) RGD PMID:22387553 NCBI chr 7:102,021,543...102,021,629
Ensembl chr 7:100,132,589...100,132,675 		JBrowse link
G Tnfsf4 TNF superfamily member 4 involved_in ISO (PMID:18713990) RGD PMID:18713990 NCBI chr13:76,256,654...76,280,133
Ensembl chr13:73,723,329...73,746,788 		JBrowse link
G Tug1 taurine up-regulated 1 IMP RGD PMID:30287503 RGD:38549580 NCBI chr14:82,743,501...82,750,534
Ensembl chr14:78,522,506...78,526,927 		JBrowse link
negative regulation of T cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cd74 CD74 molecule acts_upstream_of_or_within ISO MGI:1927205 (PMID:7679955) RGD PMID:7679955 NCBI chr18:56,527,071...56,536,406
Ensembl chr18:54,256,778...54,266,003 		JBrowse link
G Dtx1 deltex E3 ubiquitin ligase 1 acts_upstream_of_or_within ISO (PMID:12794108) RGD PMID:12794108 NCBI chr12:41,510,252...41,541,433
Ensembl chr12:35,849,617...35,880,838 		JBrowse link
G Ifnb1 interferon beta 1 involved_in ISO (PMID:20554961) RGD PMID:20554961 NCBI chr 5:108,066,650...108,067,487
Ensembl chr 5:103,020,969...103,021,523 		JBrowse link
G Ifnl1 interferon, lambda 1 involved_in ISO (PMID:19346497) RGD PMID:19346497 NCBI chr 1:92,926,184...92,927,830
Ensembl chr 1:83,798,703...83,800,235 		JBrowse link
G Nrarp Notch-regulated ankyrin repeat protein acts_upstream_of_or_within ISO (PMID:12794108) RGD PMID:12794108 NCBI chr 3:28,390,745...28,393,299
Ensembl chr 3:7,992,552...7,995,133 		JBrowse link
G Prdx2 peroxiredoxin 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:2668456 (PMID:16290204)		 Ensembl
RGD		 PMID:16290204 GO_REF:0000107 NCBI chr19:40,085,788...40,091,083
Ensembl chr19:23,180,930...23,186,194 		JBrowse link
negative regulation of T cell differentiation in thymus term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmp4 bone morphogenetic protein 4 involved_in ISO (PMID:12421925) RGD PMID:12421925 NCBI chr15:22,098,191...22,113,145
Ensembl chr15:19,618,542...19,623,306 		JBrowse link
G Foxj1 forkhead box J1 involved_in IEA
ISO		 GO_REF:0000107
(PMID:16339515)		 Ensembl
RGD		 PMID:16339515 GO_REF:0000107 NCBI chr10:102,065,163...102,069,945
Ensembl chr10:101,566,304...101,570,237 		JBrowse link
G Ihh Indian hedgehog signaling molecule involved_in ISO (PMID:19109233) RGD PMID:19109233 NCBI chr 9:83,952,986...83,959,203
Ensembl chr 9:76,504,315...76,510,532 		JBrowse link
G Nfkbid NFKB inhibitor delta acts_upstream_of_or_within ISO (PMID:11931770) RGD PMID:11931770 NCBI chr 1:85,679,353...85,690,415
Ensembl chr 1:85,680,861...85,690,447 		JBrowse link
G Rag2 recombination activating 2 IMP RGD PMID:30206106 RGD:38508903 NCBI chr 3:108,357,399...108,367,186
Ensembl chr 3:87,902,238...87,911,066 		JBrowse link
G Shh sonic hedgehog signaling molecule involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
(PMID:10981962)		 Ensembl
RGD		 PMID:10981962 GO_REF:0000107 NCBI chr 4:7,687,872...7,697,025
Ensembl chr 4:6,954,017...6,963,170 		JBrowse link
G Zc3h8 zinc finger CCCH type containing 8 involved_in ISO (PMID:12153508) RGD PMID:12153508 NCBI chr 3:116,176,779...116,193,752
Ensembl chr 3:116,176,798...116,193,787 		JBrowse link
negative regulation of T-helper 1 cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ascl2 achaete-scute family bHLH transcription factor 2 involved_in ISO (PMID:24463518) RGD PMID:24463518 NCBI chr 1:207,578,447...207,665,126
Ensembl chr 1:198,148,999...198,151,406 		JBrowse link
G Il4r interleukin 4 receptor acts_upstream_of_or_within ISO MGI:96109 (PMID:16424184) RGD PMID:16424184 NCBI chr 1:189,545,739...189,570,639
Ensembl chr 1:180,115,120...180,139,980 		JBrowse link
G Jak3 Janus kinase 3 involved_in ISS
ISO		 GO_REF:0000024
(PMID:16020505)		 BHF-UCL
RGD		 PMID:16020505 GO_REF:0000024 NCBI chr16:18,418,807...18,432,515
Ensembl chr16:18,386,405...18,398,536 		JBrowse link
G Tnfsf4 TNF superfamily member 4 involved_in ISO (PMID:9670042) RGD PMID:9670042 NCBI chr13:76,256,654...76,280,133
Ensembl chr13:73,723,329...73,746,788 		JBrowse link
negative regulation of T-helper 17 cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ascl2 achaete-scute family bHLH transcription factor 2 involved_in ISO (PMID:24463518) RGD PMID:24463518 NCBI chr 1:207,578,447...207,665,126
Ensembl chr 1:198,148,999...198,151,406 		JBrowse link
G Foxp3 forkhead box P3 involved_in ISO (PMID:23169781) RGD PMID:23169781 NCBI chr  X:17,580,380...17,601,181
Ensembl chr  X:14,908,494...14,923,838 		JBrowse link
G Il2 interleukin 2 involved_in ISO RNAcentral:URS000039ED8D_10090 (PMID:25642768) RGD PMID:25642768 NCBI chr 2:121,932,968...121,937,672
Ensembl chr 2:120,004,862...120,009,566 		JBrowse link
G Il4 interleukin 4 acts_upstream_of_or_within ISO (PMID:18792410) RGD PMID:18792410 NCBI chr10:38,272,003...38,277,549
Ensembl chr10:37,771,203...37,776,750 		JBrowse link
G Pf4 platelet factor 4 IDA RGD PMID:24986443 RGD:329901907 NCBI chr14:17,582,477...17,583,392
Ensembl chr14:17,298,308...17,299,365 		JBrowse link
G Rc3h1 ring finger and CCCH-type domains 1 involved_in ISO (PMID:25282160) RGD PMID:25282160 NCBI chr13:73,174,075...73,245,762
Ensembl chr13:73,173,946...73,238,839 		JBrowse link
G Rc3h2 ring finger and CCCH-type domains 2 involved_in ISO (PMID:25282160) RGD PMID:25282160 NCBI chr 3:41,531,319...41,596,496
Ensembl chr 3:21,110,679...21,179,933 		JBrowse link
G Smad7 SMAD family member 7 involved_in IEA
ISO		 GO_REF:0000107
(PMID:25642768)		 Ensembl
RGD		 PMID:25642768 GO_REF:0000107 NCBI chr18:71,263,508...71,291,849
Ensembl chr18:68,988,429...69,016,765 		JBrowse link
G Tbx21 T-box transcription factor 21 involved_in ISO (PMID:21151104) RGD PMID:21151104 NCBI chr10:82,578,751...82,595,253
Ensembl chr10:82,082,322...82,098,831 		JBrowse link
G Zbtb7b zinc finger and BTB domain containing 7B acts_upstream_of_or_within ISO MGI:3530739 (PMID:23034280) RGD PMID:23034280 NCBI chr 2:177,093,569...177,111,894
Ensembl chr 2:174,797,453...174,814,236 		JBrowse link
G Zc3h12a zinc finger CCCH type containing 12A involved_in ISS
ISO		 GO_REF:0000024
(PMID:25282160)		 UniProt
RGD		 PMID:25282160 GO_REF:0000024 NCBI chr 5:142,661,193...142,670,051
Ensembl chr 5:137,376,564...137,385,351 		JBrowse link
negative regulation of T-helper 17 cell lineage commitment term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cd69 Cd69 molecule involved_in ISO (PMID:24752896) RGD PMID:24752896 NCBI chr 4:164,411,485...164,419,403
Ensembl chr 4:162,725,446...162,733,542 		JBrowse link
G Jak3 Janus kinase 3 involved_in ISO
IEA		 (PMID:20696842)
GO_REF:0000107		 RGD
Ensembl		 PMID:20696842 GO_REF:0000107 NCBI chr16:18,418,807...18,432,515
Ensembl chr16:18,386,405...18,398,536 		JBrowse link
G Lgals1 galectin 1 involved_in ISO
IEA		 (PMID:24752896)
GO_REF:0000107		 RGD
Ensembl		 PMID:24752896 GO_REF:0000107 NCBI chr 7:112,365,695...112,368,801
Ensembl chr 7:110,481,392...110,488,345 		JBrowse link
G Loxl3 lysyl oxidase-like 3 involved_in ISO (PMID:28065600) RGD PMID:28065600 NCBI chr 4:117,098,358...117,114,673
Ensembl chr 4:115,540,685...115,557,466 		JBrowse link
G Stat5a signal transducer and activator of transcription 5A involved_in ISO
IEA		 (PMID:20696842)
GO_REF:0000107		 RGD
Ensembl		 PMID:20696842 GO_REF:0000107 NCBI chr10:86,285,859...86,310,187
Ensembl chr10:85,785,537...85,809,866 		JBrowse link
G Tbx21 T-box transcription factor 21 involved_in ISO (PMID:21151104) RGD PMID:21151104 NCBI chr10:82,578,751...82,595,253
Ensembl chr10:82,082,322...82,098,831 		JBrowse link
G Tnfsf18 TNF superfamily member 18 involved_in ISO (PMID:24107315) RGD PMID:24107315 NCBI chr13:73,833,478...73,907,249
Ensembl chr13:73,831,252...73,843,169 		JBrowse link
negative regulation of T-helper 2 cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Anxa1 annexin A1 involved_in ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
(PMID:17008549)		 UniProt
Ensembl
RGD		 PMID:17008549 GO_REF:0000024 GO_REF:0000107 NCBI chr 1:227,287,713...227,306,739
Ensembl chr 1:217,861,175...217,877,343 		JBrowse link
G Ascl2 achaete-scute family bHLH transcription factor 2 involved_in ISO (PMID:24463518) RGD PMID:24463518 NCBI chr 1:207,578,447...207,665,126
Ensembl chr 1:198,148,999...198,151,406 		JBrowse link
G Bcl6 BCL6, transcription repressor acts_upstream_of_or_within ISO MGI:96559 (PMID:12594267) RGD PMID:12594267 NCBI chr11:76,854,090...76,877,389
Ensembl chr11:76,854,090...76,877,389 		JBrowse link
G Hlx H2.0-like homeobox acts_upstream_of_or_within ISO MGI:105367|MGI:2182089 (PMID:16424184) RGD PMID:16424184 NCBI chr13:98,811,852...98,817,264
Ensembl chr13:96,280,339...96,285,750 		JBrowse link
G Socs5 suppressor of cytokine signaling 5 involved_in ISO (PMID:12242343) RGD PMID:12242343 NCBI chr 6:7,481,039...7,512,644
Ensembl chr 6:7,481,095...7,514,834 		JBrowse link
G Zfp35 zinc finger protein 35 involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr18:15,268,852...15,284,334
Ensembl chr18:15,268,814...15,285,088 		JBrowse link
negative regulation of T-helper cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Rc3h1 ring finger and CCCH-type domains 1 acts_upstream_of_or_within ISO MGI:3581675 (PMID:15917799) RGD PMID:15917799 NCBI chr13:73,174,075...73,245,762
Ensembl chr13:73,173,946...73,238,839 		JBrowse link
negative T cell selection term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Themis thymocyte selection associated involved_in ISO (PMID:19597498), (PMID:19597499) RGD PMID:19597498 PMID:19597499 NCBI chr 1:18,251,136...18,483,851
Ensembl chr 1:16,432,631...16,664,329 		JBrowse link
negative thymic T cell selection term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aire autoimmune regulator involved_in
acts_upstream_of_or_within		 IBA
ISO		 GO_REF:0000033
MGI:1277186 (PMID:23382543)		 GO_Central
RGD		 PMID:23382543 GO_REF:0000033 NCBI chr20:10,635,775...10,650,709
Ensembl chr20:10,636,123...10,651,060 		JBrowse link
G Atg5 autophagy related 5 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:1338803|MGI:3612279 (PMID:23382543)		 Ensembl
RGD		 PMID:23382543 GO_REF:0000107 NCBI chr20:49,380,835...49,471,826
Ensembl chr20:47,798,290...47,889,209 		JBrowse link
G Ccr7 C-C motif chemokine receptor 7 involved_in ISO (PMID:17785582) RGD PMID:17785582 NCBI chr10:84,594,399...84,604,514
Ensembl chr10:84,097,381...84,108,309 		JBrowse link
G Cd28 Cd28 molecule acts_upstream_of_or_within ISO MGI:1857150 (PMID:10429671) RGD PMID:10429671 NCBI chr 9:69,660,316...69,689,192
Ensembl chr 9:62,166,192...62,194,685 		JBrowse link
G Cd3e CD3 epsilon subunit of T-cell receptor complex acts_upstream_of_or_within ISO (PMID:7630421) RGD PMID:7630421 NCBI chr 8:54,200,617...54,211,770
Ensembl chr 8:45,303,852...45,315,022 		JBrowse link
G Cd74 CD74 molecule acts_upstream_of_or_within ISO MGI:1927205 (PMID:7679955) RGD PMID:7679955 NCBI chr18:56,527,071...56,536,406
Ensembl chr18:54,256,778...54,266,003 		JBrowse link
G Dock2 dedicator of cytokinesis 2 acts_upstream_of_or_within ISO MGI:2152031 (PMID:12871644) RGD PMID:12871644 NCBI chr10:18,827,237...19,244,832
Ensembl chr10:18,827,239...19,244,808 		JBrowse link
G Fas Fas cell surface death receptor acts_upstream_of_or_within ISO MGI:1856334 (PMID:10429671) RGD PMID:10429671 NCBI chr 1:241,212,155...241,245,774
Ensembl chr 1:231,798,960...231,832,591 		JBrowse link
G Gli3 GLI family zinc finger 3 involved_in ISO (PMID:19667090) RGD PMID:19667090 NCBI chr17:54,134,064...54,405,198
Ensembl chr17:49,438,567...49,709,712 		JBrowse link
G Mink1 misshapen-like kinase 1 acts_upstream_of_or_within ISO (PMID:15608642) RGD PMID:15608642 NCBI chr10:55,776,879...55,829,406
Ensembl chr10:55,278,391...55,330,782 		JBrowse link
G Ptprc protein tyrosine phosphatase, receptor type, C acts_upstream_of_or_within ISO MGI:1857277 (PMID:8666928) RGD PMID:8666928 NCBI chr13:52,147,717...52,259,810
Ensembl chr13:49,596,193...49,708,692 		JBrowse link
G Shh sonic hedgehog signaling molecule involved_in IEA
ISO
ISS		 GO_REF:0000107
(PMID:17227833)
GO_REF:0000024		 Ensembl
RGD
UniProt		 PMID:17227833 GO_REF:0000024 GO_REF:0000107 NCBI chr 4:7,687,872...7,697,025
Ensembl chr 4:6,954,017...6,963,170 		JBrowse link
G Spn sialophorin acts_upstream_of_or_within ISO MGI:1857246 (PMID:10429671) RGD PMID:10429671 NCBI chr 1:191,177,449...191,190,115
Ensembl chr 1:181,746,429...181,759,628 		JBrowse link
G Zap70 zeta chain of T cell receptor associated protein kinase 70 acts_upstream_of_or_within ISO MGI:2677447 (PMID:7630421) RGD PMID:7630421 NCBI chr 9:46,485,605...46,507,552
Ensembl chr 9:38,989,750...39,011,700 		JBrowse link
NK T cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atf2 activating transcription factor 2 involved_in IEA
ISO		 GO_REF:0000107
MGI:3696689 (PMID:16223777)		 Ensembl
RGD		 PMID:16223777 GO_REF:0000107 NCBI chr 3:79,125,814...79,202,896
Ensembl chr 3:58,718,332...58,795,236 		JBrowse link
G Cd1d1 CD1d1 molecule involved_in ISO (PMID:9133426) RGD PMID:9133426 NCBI chr 2:174,721,522...174,725,029
Ensembl chr 2:172,423,582...172,427,089 		JBrowse link
G Fosl2 FOS like 2, AP-1 transcription factor subunit involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:3521818 (PMID:19620306)		 Ensembl
RGD		 PMID:19620306 GO_REF:0000107 NCBI chr 6:30,017,952...30,039,269
Ensembl chr 6:24,300,956...24,320,034 		JBrowse link
G Itk IL2-inducible T-cell kinase involved_in
acts_upstream_of_or_within		 IBA
ISO		 GO_REF:0000033
MGI:102960|MGI:2178928 (PMID:18292523)		 GO_Central
RGD		 PMID:18292523 GO_REF:0000033 NCBI chr10:31,254,667...31,316,004
Ensembl chr10:30,753,344...30,814,685 		JBrowse link
G Psap prosaposin acts_upstream_of_or_within ISO MGI:1888378 (PMID:14684827) RGD PMID:14684827 NCBI chr20:28,756,951...28,783,422
Ensembl chr20:28,214,271...28,240,498 		JBrowse link
G Txk TXK tyrosine kinase acts_upstream_of_or_within ISO MGI:96621 (PMID:18292523) RGD PMID:18292523 NCBI chr14:35,817,270...35,873,454
Ensembl chr14:35,463,944...35,519,448 		JBrowse link
G Zbtb7b zinc finger and BTB domain containing 7B involved_in ISO (PMID:23105140) RGD PMID:23105140 NCBI chr 2:177,093,569...177,111,894
Ensembl chr 2:174,797,453...174,814,236 		JBrowse link
G Zfp683 zinc finger protein 683 acts_upstream_of_or_within ISO MGI:4276801 (PMID:22885984) RGD PMID:22885984 NCBI chr 5:146,277,972...146,285,856
Ensembl chr 5:146,278,978...146,285,000 		JBrowse link
NK T cell lineage commitment term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Kctd9 potassium channel tetramerization domain containing 9 acts_upstream_of_or_within ISO (PMID:31024568) RGD PMID:31024568 NCBI chr15:46,117,211...46,145,258
Ensembl chr15:41,942,381...41,969,862 		JBrowse link
G Tox thymocyte selection-associated high mobility group box involved_in ISO (PMID:18195075) RGD PMID:18195075 NCBI chr 5:24,672,487...24,968,754
Ensembl chr 5:19,874,467...20,171,272 		JBrowse link
plasma cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bcl6 BCL6, transcription repressor acts_upstream_of ISO MGI:2158439 (PMID:15240705) RGD PMID:15240705 NCBI chr11:76,854,090...76,877,389
Ensembl chr11:76,854,090...76,877,389 		JBrowse link
G Enpp1 ectonucleotide pyrophosphatase/phosphodiesterase 1 involved_in ISO MGI:2385534 (PMID:29259245) RGD PMID:29259245 NCBI chr 1:22,518,051...22,583,044
Ensembl chr 1:20,698,764...20,763,715 		JBrowse link
G Itm2a integral membrane protein 2A acts_upstream_of_or_within ISO MGI:5645968 (PMID:24831988) RGD PMID:24831988 NCBI chr  X:72,486,383...72,492,344
Ensembl chr  X:72,486,381...72,492,363 		JBrowse link
G Lgals1 galectin 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
(PMID:21753146)		 Ensembl
RGD		 PMID:21753146 GO_REF:0000107 NCBI chr 7:112,365,695...112,368,801
Ensembl chr 7:110,481,392...110,488,345 		JBrowse link
G Lgals8 galectin 8 acts_upstream_of_or_within ISO (PMID:21753146) RGD PMID:21753146 NCBI chr17:62,716,368...62,744,272
Ensembl chr17:58,028,105...58,052,764 		JBrowse link
G Nfkbiz NFKB inhibitor zeta involved_in ISO MGI:5501251 (PMID:25124037) RGD PMID:25124037 NCBI chr11:58,251,720...58,279,767
Ensembl chr11:44,782,676...44,810,723 		JBrowse link
G Nkx2-3 NK2 homeobox 3 acts_upstream_of_or_within ISO MGI:2448069 (PMID:10926756) RGD PMID:10926756 NCBI chr 1:242,478,130...242,481,083
Ensembl chr 1:242,478,130...242,481,083 		JBrowse link
positive regulation of alpha-beta T cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ada adenosine deaminase involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:1857117 (PMID:11067867), (PMID:12163459), (PMID:16670300)		 Ensembl
RGD		 PMID:11067867 PMID:12163459 PMID:16670300 GO_REF:0000107 NCBI chr 3:172,818,174...172,842,283
Ensembl chr 3:152,398,747...152,447,088 		JBrowse link
G Gli3 GLI family zinc finger 3 involved_in ISO (PMID:15855276) RGD PMID:15855276 NCBI chr17:54,134,064...54,405,198
Ensembl chr17:49,438,567...49,709,712 		JBrowse link
G Ihh Indian hedgehog signaling molecule involved_in ISO (PMID:19109233) RGD PMID:19109233 NCBI chr 9:83,952,986...83,959,203
Ensembl chr 9:76,504,315...76,510,532 		JBrowse link
G Itpkb inositol-trisphosphate 3-kinase B acts_upstream_of_or_within ISO MGI:3039799 (PMID:15064401) RGD PMID:15064401 NCBI chr13:94,601,072...94,696,180
Ensembl chr13:92,069,216...92,162,004 		JBrowse link
G Nkap NFKB activating protein involved_in ISO
ISS		 (PMID:19409814)
GO_REF:0000024		 RGD
UniProt		 PMID:19409814 GO_REF:0000024 NCBI chr  X:116,373,031...116,392,677
Ensembl chr  X:116,372,839...116,394,945 		JBrowse link
G Pnp purine nucleoside phosphorylase acts_upstream_of_or_within ISO (PMID:16964310) RGD PMID:16964310 NCBI chr15:26,644,147...26,651,808
Ensembl chr15:24,170,602...24,203,986 		JBrowse link
G Rhoa ras homolog family member A involved_in ISO (PMID:25398325) RGD PMID:25398325 NCBI chr 8:117,870,548...117,904,303
Ensembl chr 8:108,991,954...109,025,746 		JBrowse link
G Shh sonic hedgehog signaling molecule involved_in IEA
ISO
ISS		 GO_REF:0000107
(PMID:14764698)
GO_REF:0000024		 Ensembl
RGD
UniProt		 PMID:14764698 GO_REF:0000024 GO_REF:0000107 NCBI chr 4:7,687,872...7,697,025
Ensembl chr 4:6,954,017...6,963,170 		JBrowse link
G Syk spleen associated tyrosine kinase involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:99613 (PMID:9275205)		 Ensembl
RGD		 PMID:9275205 GO_REF:0000107 NCBI chr17:12,756,493...12,830,927
Ensembl chr17:12,604,619...12,661,410 		JBrowse link
G Zap70 zeta chain of T cell receptor associated protein kinase 70 acts_upstream_of_or_within ISO MGI:2677447|MGI:3526403|MGI:99515 (PMID:7630421), (PMID:9208839), (PMID:9275205) RGD PMID:7630421 PMID:9208839 PMID:9275205 NCBI chr 9:46,485,605...46,507,552
Ensembl chr 9:38,989,750...39,011,700 		JBrowse link
positive regulation of B cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atp11c ATPase phospholipid transporting 11C involved_in ISO (PMID:21423173) RGD PMID:21423173 NCBI chr  X:143,600,763...143,788,407
Ensembl chr  X:138,565,836...138,751,204 		JBrowse link
G Bad BCL2-associated agonist of cell death involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:3029528 (PMID:12431371)		 Ensembl
RGD		 PMID:12431371 GO_REF:0000107 NCBI chr 1:213,562,719...213,572,034
Ensembl chr 1:204,131,501...204,142,823 		JBrowse link
G Cd27 CD27 molecule involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 4:158,030,700...158,035,862
Ensembl chr 4:158,030,703...158,035,592 		JBrowse link
G Il2rg interleukin 2 receptor subunit gamma acts_upstream_of_or_within ISO MGI:2429736|MGI:5544783 (PMID:23918385), (PMID:9252128) RGD PMID:9252128 PMID:23918385 NCBI chr  X:66,395,330...66,399,026
Ensembl chr  X:66,392,542...66,399,823 		JBrowse link
G Il7 interleukin 7 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
(PMID:16797412)		 Ensembl
RGD		 PMID:16797412 GO_REF:0000107 NCBI chr 2:96,142,523...96,186,282
Ensembl chr 2:94,234,766...94,280,075 		JBrowse link
G Inpp5d inositol polyphosphate-5-phosphatase D involved_in
acts_upstream_of_or_within		 IEA
ISO
IBA		 GO_REF:0000107
MGI:2386884 (PMID:10704460), (PMID:9620849)
GO_REF:0000033		 Ensembl
RGD
GO_Central		 PMID:9620849 PMID:10704460 GO_REF:0000033 GO_REF:0000107 NCBI chr 9:95,735,533...95,840,584
Ensembl chr 9:88,287,677...88,392,746 		JBrowse link
G Mmp14 matrix metallopeptidase 14 involved_in ISS
ISO		 GO_REF:0000024
(PMID:21572390)		 UniProt
RGD		 PMID:21572390 GO_REF:0000024 NCBI chr15:31,857,824...31,867,049
Ensembl chr15:27,887,727...27,899,864 		JBrowse link
G Nckap1l NCK associated protein 1 like involved_in ISS
ISO		 GO_REF:0000024
(PMID:19015308)		 UniProt
RGD		 PMID:19015308 GO_REF:0000024 NCBI chr 7:136,455,900...136,501,384
Ensembl chr 7:134,577,482...134,622,934 		JBrowse link
G Pcid2 PCI domain containing 2 involved_in ISO (PMID:20870947) RGD PMID:20870947 NCBI chr16:76,423,245...76,448,712
Ensembl chr16:76,423,245...76,448,712 		JBrowse link
G Ppp2r3c protein phosphatase 2, regulatory subunit B'', gamma involved_in
acts_upstream_of_or_within		 IEA
ISO
IBA		 GO_REF:0000107
MGI:3759678 (PMID:16129705)
GO_REF:0000033		 Ensembl
RGD
GO_Central		 PMID:16129705 GO_REF:0000033 GO_REF:0000107 NCBI chr 6:78,382,849...78,406,037
Ensembl chr 6:72,647,025...72,672,491 		JBrowse link
G Spi1 Spi-1 proto-oncogene involved_in ISO
IEA
ISS		 (PMID:33951726)
GO_REF:0000107
GO_REF:0000024		 RGD
Ensembl
UniProt		 PMID:33951726 GO_REF:0000024 GO_REF:0000107 NCBI chr 3:97,529,509...97,548,204
Ensembl chr 3:77,073,012...77,092,393 		JBrowse link
G Stat5a signal transducer and activator of transcription 5A acts_upstream_of_or_within ISO MGI:103035 (PMID:10979977) RGD PMID:10979977 NCBI chr10:86,285,859...86,310,187
Ensembl chr10:85,785,537...85,809,866 		JBrowse link
G Stat5b signal transducer and activator of transcription 5B involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:103036 (PMID:10979977)		 Ensembl
RGD		 PMID:10979977 GO_REF:0000107 NCBI chr10:86,205,148...86,276,178
Ensembl chr10:85,705,670...85,775,668 		JBrowse link
G Syk spleen associated tyrosine kinase involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:1857421|MGI:2384078 (PMID:7477352), (PMID:7477353)
(PMID:18369315)		 Ensembl
RGD		 PMID:7477352 PMID:7477353 PMID:18369315 GO_REF:0000107 NCBI chr17:12,756,493...12,830,927
Ensembl chr17:12,604,619...12,661,410 		JBrowse link
G Xbp1 X-box binding protein 1 involved_in ISO
ISS		 (PMID:11460154)
GO_REF:0000024		 RGD
UniProt		 PMID:11460154 GO_REF:0000024 NCBI chr14:84,604,623...84,609,707
Ensembl chr14:80,390,643...80,395,693 		JBrowse link
positive regulation of CD4-positive, alpha-beta T cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cd83 CD83 molecule acts_upstream_of_or_within ISO MGI:3055293 (PMID:15322158) RGD PMID:15322158 NCBI chr17:21,093,281...21,113,223
Ensembl chr17:20,887,309...20,907,083 		JBrowse link
G Foxp3 forkhead box P3 acts_upstream_of_or_within ISO (PMID:17028180) RGD PMID:17028180 NCBI chr  X:17,580,380...17,601,181
Ensembl chr  X:14,908,494...14,923,838 		JBrowse link
G Nckap1l NCK associated protein 1 like involved_in ISS
ISO		 GO_REF:0000024
(PMID:19015308)		 UniProt
RGD		 PMID:19015308 GO_REF:0000024 NCBI chr 7:136,455,900...136,501,384
Ensembl chr 7:134,577,482...134,622,934 		JBrowse link
G Sash3 SAM and SH3 domain containing 3 acts_upstream_of_or_within ISO MGI:3716944 (PMID:16227612) RGD PMID:16227612 NCBI chr  X:132,204,717...132,219,421
Ensembl chr  X:127,326,859...127,341,519 		JBrowse link
G Socs1 suppressor of cytokine signaling 1 involved_in IEA
ISO
ISS		 GO_REF:0000107
(PMID:24880459)
GO_REF:0000024		 Ensembl
RGD
UniProt		 PMID:24880459 GO_REF:0000024 GO_REF:0000107 NCBI chr10:5,389,574...5,391,265
Ensembl chr10:4,882,560...4,884,383 		JBrowse link
G Tnfsf4 TNF superfamily member 4 involved_in ISO (PMID:20639485) RGD PMID:20639485 NCBI chr13:76,256,654...76,280,133
Ensembl chr13:73,723,329...73,746,788 		JBrowse link
G Zbtb7b zinc finger and BTB domain containing 7B involved_in ISO (PMID:24880459) RGD PMID:24880459 NCBI chr 2:177,093,569...177,111,894
Ensembl chr 2:174,797,453...174,814,236 		JBrowse link
positive regulation of CD4-positive, CD25-positive, alpha-beta regulatory T cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Foxp3 forkhead box P3 acts_upstream_of_or_within ISO MGI:1857034|MGI:2654936|MGI:3696705 (PMID:12612578), (PMID:16275384), (PMID:16301745), (PMID:18573908) RGD PMID:12612578 PMID:16275384 PMID:16301745 PMID:18573908 NCBI chr  X:17,580,380...17,601,181
Ensembl chr  X:14,908,494...14,923,838 		JBrowse link
G Gimap5 GTPase, IMAP family member 5 IMP RGD PMID:15778366 RGD:2303772 NCBI chr 4:79,025,151...79,031,917
Ensembl chr 4:77,687,564...77,703,086 		JBrowse link
G Il2rg interleukin 2 receptor subunit gamma acts_upstream_of_or_within ISO MGI:1857455 (PMID:16227984) RGD PMID:16227984 NCBI chr  X:66,395,330...66,399,026
Ensembl chr  X:66,392,542...66,399,823 		JBrowse link
G Klhl25 kelch-like family member 25 involved_in ISO
ISS		 (PMID:34491895)
GO_REF:0000024		 RGD
UniProt		 PMID:34491895 GO_REF:0000024 NCBI chr 1:129,724,894...129,750,142
Ensembl chr 1:129,722,026...129,750,227 		JBrowse link
G RT1-Da RT1 class II, locus Da involved_in ISO (PMID:28467828) RGD PMID:28467828 NCBI chr20:4,515,393...4,520,387
Ensembl chr20:4,512,911...4,518,455 		JBrowse link
G RT1-Db1 RT1 class II, locus Db1 involved_in ISO (PMID:28467828) RGD PMID:28467828 NCBI chr20:4,550,594...4,560,182
Ensembl chr20:4,548,666...4,558,258 		JBrowse link
positive regulation of CD4-positive, CD25-positive, alpha-beta regulatory T cell differentiation involved in immune response term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ifng interferon gamma involved_in ISO (PMID:20209097) RGD PMID:20209097 NCBI chr 7:55,789,180...55,793,216
Ensembl chr 7:53,903,337...53,907,375 		JBrowse link
G Lgals9 galectin 9 involved_in ISO (PMID:20209097) RGD PMID:20209097 NCBI chr10:64,405,044...64,428,249
Ensembl chr10:63,907,018...63,930,045 		JBrowse link
positive regulation of CD8-positive, alpha-beta T cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cbfb core-binding factor subunit beta involved_in ISO (PMID:18258917) RGD PMID:18258917 NCBI chr19:33,049,162...33,092,752
Ensembl chr19:33,049,172...33,092,751 		JBrowse link
G Lilrb4 leukocyte immunoglobulin like receptor B4 involved_in ISO (PMID:18420485) RGD PMID:18420485 NCBI chr 1:78,847,685...78,853,294
Ensembl chr 1:69,805,250...69,810,660 		JBrowse link
G Nckap1l NCK associated protein 1 like involved_in ISS
ISO		 GO_REF:0000024
(PMID:19015308)		 UniProt
RGD		 PMID:19015308 GO_REF:0000024 NCBI chr 7:136,455,900...136,501,384
Ensembl chr 7:134,577,482...134,622,934 		JBrowse link
G Runx1 RUNX family transcription factor 1 involved_in ISS
ISO		 GO_REF:0000024
(PMID:18258917)		 UniProt
RGD		 PMID:18258917 GO_REF:0000024 NCBI chr11:45,325,778...45,560,300
Ensembl chr11:31,843,764...32,074,542 		JBrowse link
G Runx3 RUNX family transcription factor 3 involved_in ISO (PMID:18258917) RGD PMID:18258917 NCBI chr 5:152,644,270...152,702,835
Ensembl chr 5:147,360,994...147,419,156 		JBrowse link
positive regulation of cytotoxic T cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Sart1 spliceosome associated factor 1, recruiter of U4/U6.U5 tri-snRNP involved_in ISO (PMID:10209962) RGD PMID:10209962 NCBI chr 1:212,119,824...212,128,517
Ensembl chr 1:202,690,459...202,699,136 		JBrowse link
G Tnfsf9 TNF superfamily member 9 involved_in IDA
IBA		 GO_REF:0000033 GO_Central
RGD		 PMID:19187795 GO_REF:0000033, RGD:2317344 NCBI chr 9:1,944,017...1,946,351
Ensembl chr 9:1,944,017...1,946,345 		JBrowse link
positive regulation of gamma-delta T cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gimap5 GTPase, IMAP family member 5 IMP RGD PMID:11859104 RGD:625608 NCBI chr 4:79,025,151...79,031,917
Ensembl chr 4:77,687,564...77,703,086 		JBrowse link
G Lck LCK proto-oncogene, Src family tyrosine kinase acts_upstream_of_or_within ISO MGI:1857211 (PMID:7807014) RGD PMID:7807014 NCBI chr 5:147,172,642...147,201,267
Ensembl chr 5:141,888,326...141,903,794 		JBrowse link
G Lef1 lymphoid enhancer binding factor 1 involved_in ISS
ISO
IEA		 GO_REF:0000024
(PMID:23562159)
GO_REF:0000107		 UniProt
RGD
Ensembl		 PMID:23562159 GO_REF:0000024 GO_REF:0000107 NCBI chr 2:222,340,541...222,453,931
Ensembl chr 2:219,666,592...219,779,794 		JBrowse link
G Nckap1l NCK associated protein 1 like involved_in ISS
ISO		 GO_REF:0000024
(PMID:19015308)		 UniProt
RGD		 PMID:19015308 GO_REF:0000024 NCBI chr 7:136,455,900...136,501,384
Ensembl chr 7:134,577,482...134,622,934 		JBrowse link
G Ptprc protein tyrosine phosphatase, receptor type, C acts_upstream_of_or_within ISO MGI:2181288 (PMID:7807014) RGD PMID:7807014 NCBI chr13:52,147,717...52,259,810
Ensembl chr13:49,596,193...49,708,692 		JBrowse link
G Sox13 SRY-box transcription factor 13 involved_in ISO (PMID:23562159) RGD PMID:23562159 NCBI chr13:47,383,145...47,427,572
Ensembl chr13:44,831,085...44,875,762 		JBrowse link
G Sox4 SRY-box transcription factor 4 involved_in ISO (PMID:23562159) RGD PMID:23562159 NCBI chr17:35,876,298...35,881,004
Ensembl chr17:35,667,537...35,673,665 		JBrowse link
G Stat5a signal transducer and activator of transcription 5A acts_upstream_of_or_within ISO MGI:103035 (PMID:15294943) RGD PMID:15294943 NCBI chr10:86,285,859...86,310,187
Ensembl chr10:85,785,537...85,809,866 		JBrowse link
G Stat5b signal transducer and activator of transcription 5B involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:103036 (PMID:15294943)		 Ensembl
RGD		 PMID:15294943 GO_REF:0000107 NCBI chr10:86,205,148...86,276,178
Ensembl chr10:85,705,670...85,775,668 		JBrowse link
G Syk spleen associated tyrosine kinase involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:1857421|MGI:2384078 (PMID:7477352), (PMID:8790395)		 Ensembl
RGD		 PMID:7477352 PMID:8790395 GO_REF:0000107 NCBI chr17:12,756,493...12,830,927
Ensembl chr17:12,604,619...12,661,410 		JBrowse link
positive regulation of immature T cell proliferation in thymus term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Blm BLM RecQ like helicase acts_upstream_of_or_within ISO MGI:3053044|MGI:3663359 (PMID:17210642) RGD PMID:17210642 NCBI chr 1:143,819,072...143,905,300
Ensembl chr 1:134,409,857...134,484,312 		JBrowse link
G Bmi1 BMI1 proto-oncogene, polycomb ring finger involved_in ISO (PMID:15964995) RGD PMID:15964995 NCBI chr17:86,240,683...86,250,044
Ensembl chr17:81,332,214...81,388,690 		JBrowse link
G Foxp3 forkhead box P3 acts_upstream_of_or_within ISO MGI:1857034 (PMID:16230479) RGD PMID:16230479 NCBI chr  X:17,580,380...17,601,181
Ensembl chr  X:14,908,494...14,923,838 		JBrowse link
G Il1a interleukin 1 alpha involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 3:136,979,804...136,990,236
Ensembl chr 3:116,526,604...116,536,822 		JBrowse link
G Il1b interleukin 1 beta involved_in IDA
IBA		 GO_REF:0000033 GO_Central
RGD		 PMID:8590311 GO_REF:0000033, RGD:7401228 NCBI chr 3:137,030,200...137,036,581
Ensembl chr 3:116,577,010...116,583,415 		JBrowse link
G Ripk2 receptor-interacting serine-threonine kinase 2 acts_upstream_of_or_within ISO MGI:2660793 (PMID:11894098) RGD PMID:11894098 NCBI chr 5:34,428,573...34,459,808
Ensembl chr 5:29,631,570...29,662,657 		JBrowse link
G Shh sonic hedgehog signaling molecule involved_in IEA
ISO
ISS		 GO_REF:0000107
(PMID:14764698), (PMID:19273836)
GO_REF:0000024		 Ensembl
RGD
UniProt		 PMID:14764698 PMID:19273836 GO_REF:0000024 GO_REF:0000107 NCBI chr 4:7,687,872...7,697,025
Ensembl chr 4:6,954,017...6,963,170 		JBrowse link
positive regulation of lymphocyte differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Inpp5d inositol polyphosphate-5-phosphatase D acts_upstream_of_or_within ISO MGI:2386884 (PMID:9620849) RGD PMID:9620849 NCBI chr 9:95,735,533...95,840,584
Ensembl chr 9:88,287,677...88,392,746 		JBrowse link
G Nckap1l NCK associated protein 1 like involved_in ISS
ISO		 GO_REF:0000024
(PMID:19015308)		 UniProt
RGD		 PMID:19015308 GO_REF:0000024 NCBI chr 7:136,455,900...136,501,384
Ensembl chr 7:134,577,482...134,622,934 		JBrowse link
G Prkdc protein kinase, DNA-activated, catalytic subunit involved_in ISO (PMID:32103174) RGD PMID:32103174 NCBI chr11:98,544,952...98,762,499
Ensembl chr11:85,040,792...85,257,952 		JBrowse link
G Stat5a signal transducer and activator of transcription 5A acts_upstream_of_or_within ISO MGI:103035 (PMID:15294943) RGD PMID:15294943 NCBI chr10:86,285,859...86,310,187
Ensembl chr10:85,785,537...85,809,866 		JBrowse link
G Stat5b signal transducer and activator of transcription 5B acts_upstream_of_or_within ISO MGI:103036 (PMID:15294943) RGD PMID:15294943 NCBI chr10:86,205,148...86,276,178
Ensembl chr10:85,705,670...85,775,668 		JBrowse link
G Xrcc6 X-ray repair cross complementing 6 involved_in ISO (PMID:32103174) RGD PMID:32103174 NCBI chr 7:115,423,026...115,443,884
Ensembl chr 7:113,543,057...113,563,762 		JBrowse link
positive regulation of memory T cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cd46 CD46 molecule involved_in ISO (PMID:12540904) RGD PMID:12540904 NCBI chr13:109,104,122...109,134,903
Ensembl chr13:106,574,858...106,660,445 		JBrowse link
G Il23a interleukin 23 subunit alpha involved_in ISO (PMID:14688363) RGD PMID:14688363 NCBI chr 7:1,306,320...1,308,434
Ensembl chr 7:721,809...723,923 		JBrowse link
G Pck1 phosphoenolpyruvate carboxykinase 1 involved_in ISS
ISO		 GO_REF:0000024
(PMID:29230018)		 UniProt
RGD		 PMID:29230018 GO_REF:0000024 NCBI chr 3:182,348,572...182,354,521
Ensembl chr 3:161,930,256...161,936,191 		JBrowse link
G RT1-Da RT1 class II, locus Da involved_in ISO (PMID:27591323) RGD PMID:27591323 NCBI chr20:4,515,393...4,520,387
Ensembl chr20:4,512,911...4,518,455 		JBrowse link
G RT1-Db1 RT1 class II, locus Db1 involved_in ISO (PMID:27591323) RGD PMID:27591323 NCBI chr20:4,550,594...4,560,182
Ensembl chr20:4,548,666...4,558,258 		JBrowse link
G Tnfsf4 TNF superfamily member 4 involved_in ISO (PMID:18713990) RGD PMID:18713990 NCBI chr13:76,256,654...76,280,133
Ensembl chr13:73,723,329...73,746,788 		JBrowse link
positive regulation of natural killer cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Axl Axl receptor tyrosine kinase involved_in ISO (PMID:18840707) RGD PMID:18840707 NCBI chr 1:90,392,864...90,424,123
Ensembl chr 1:81,265,088...81,296,265 		JBrowse link
G Flt3lg Fms related receptor tyrosine kinase 3 ligand acts_upstream_of_or_within ISO MGI:2158499 (PMID:14607906) RGD PMID:14607906 NCBI chr 1:95,615,056...95,620,463
Ensembl chr 1:95,609,370...95,620,463 		JBrowse link
G Gas6 growth arrest specific 6 involved_in ISS
ISO		 GO_REF:0000024
(PMID:18840707)		 UniProt
RGD		 PMID:18840707 GO_REF:0000024 NCBI chr16:82,747,676...82,778,090
Ensembl chr16:76,045,426...76,075,904 		JBrowse link
G Il15 interleukin 15 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:1931086|MGI:2136897 (PMID:14607906), (PMID:17318811)		 Ensembl
RGD		 PMID:14607906 PMID:17318811 GO_REF:0000107 NCBI chr19:42,536,160...42,611,349
Ensembl chr19:25,640,251...25,706,820 		JBrowse link
G Il15ra interleukin 15 receptor subunit alpha acts_upstream_of_or_within ISO MGI:1934016 (PMID:14607906) RGD PMID:14607906 NCBI chr17:71,712,141...71,742,072
Ensembl chr17:66,802,334...66,832,278 		JBrowse link
G Il21 interleukin 21 acts_upstream_of_or_within ISO (PMID:14764669) RGD PMID:14764669 NCBI chr 2:122,045,240...122,055,142
Ensembl chr 2:120,119,444...120,126,996 		JBrowse link
G Rasgrp1 RAS guanyl releasing protein 1 involved_in IEA
ISO		 GO_REF:0000107
(PMID:21957144)		 Ensembl
RGD		 PMID:21957144 GO_REF:0000107 NCBI chr 3:124,624,039...124,684,079
Ensembl chr 3:104,170,013...104,230,056 		JBrowse link
G Stat5a signal transducer and activator of transcription 5A acts_upstream_of_or_within ISO MGI:1857249 (PMID:9841920) RGD PMID:9841920 NCBI chr10:86,285,859...86,310,187
Ensembl chr10:85,785,537...85,809,866 		JBrowse link
G Stat5b signal transducer and activator of transcription 5B involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:2181592 (PMID:9841920)		 Ensembl
RGD		 PMID:9841920 GO_REF:0000107 NCBI chr10:86,205,148...86,276,178
Ensembl chr10:85,705,670...85,775,668 		JBrowse link
G Tox thymocyte selection-associated high mobility group box acts_upstream_of_or_within ISO MGI:3773716 (PMID:20818394) RGD PMID:20818394 NCBI chr 5:24,672,487...24,968,754
Ensembl chr 5:19,874,467...20,171,272 		JBrowse link
G Zbtb1 zinc finger and BTB domain containing 1 involved_in ISO (PMID:22753936) RGD PMID:22753936 NCBI chr 6:100,832,506...100,864,019
Ensembl chr 6:95,096,387...95,118,996 		JBrowse link
positive regulation of NK T cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ap3b1 adaptor related protein complex 3 subunit beta 1 acts_upstream_of_or_within ISO MGI:1856989 (PMID:14557411) RGD PMID:14557411 NCBI chr 2:27,331,241...27,535,683
Ensembl chr 2:25,600,040...25,800,935 		JBrowse link
G Ap3d1 adaptor related protein complex 3 subunit delta 1 acts_upstream_of_or_within ISO MGI:1856083 (PMID:14557411) RGD PMID:14557411 NCBI chr 7:9,620,909...9,656,350
Ensembl chr 7:8,970,291...9,005,643 		JBrowse link
G Cd1d1 CD1d1 molecule acts_upstream_of_or_within ISO MGI:2180711|MGI:2180713 (PMID:10201995), (PMID:9133426) RGD PMID:9133426 PMID:10201995 NCBI chr 2:174,721,522...174,725,029
Ensembl chr 2:172,423,582...172,427,089 		JBrowse link
G Tgfbr2 transforming growth factor, beta receptor 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:2183502|MGI:2386448 (PMID:16973387)		 Ensembl
RGD		 PMID:16973387 GO_REF:0000107 NCBI chr 8:124,672,677...124,761,741
Ensembl chr 8:115,794,537...115,883,228 		JBrowse link
G Zbtb16 zinc finger and BTB domain containing 16 involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr 8:57,885,886...58,073,507
Ensembl chr 8:48,994,566...49,177,011 		JBrowse link
positive regulation of plasma cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ddrgk1 DDRGK domain containing 1 involved_in ISO (PMID:30842412) RGD PMID:30842412 NCBI chr 3:138,315,006...138,336,691
Ensembl chr 3:117,861,653...117,882,680 		JBrowse link
G Il10 interleukin 10 acts_upstream_of ISO UniProtKB:P60568 (PMID:22962438) RGD PMID:22962438 NCBI chr13:45,024,921...45,029,586
Ensembl chr13:42,472,839...42,477,313 		JBrowse link
G Il2 interleukin 2 acts_upstream_of ISO UniProtKB:P22301 (PMID:22962438) RGD PMID:22962438 NCBI chr 2:121,932,968...121,937,672
Ensembl chr 2:120,004,862...120,009,566 		JBrowse link
G Xbp1 X-box binding protein 1 involved_in ISO
IEA
ISS		 (PMID:11460154)
GO_REF:0000107
GO_REF:0000024		 RGD
Ensembl
UniProt		 PMID:11460154 GO_REF:0000024 GO_REF:0000107 NCBI chr14:84,604,623...84,609,707
Ensembl chr14:80,390,643...80,395,693 		JBrowse link
positive regulation of pro-T cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Zbtb1 zinc finger and BTB domain containing 1 involved_in ISO (PMID:22753936) RGD PMID:22753936 NCBI chr 6:100,832,506...100,864,019
Ensembl chr 6:95,096,387...95,118,996 		JBrowse link
positive regulation of regulatory T cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ambra1 autophagy and beclin 1 regulator 1 involved_in ISO (PMID:30513302) RGD PMID:30513302 NCBI chr 3:77,700,936...77,890,221
Ensembl chr 3:77,700,936...77,890,221 		JBrowse link
G Bcl6 BCL6, transcription repressor involved_in ISO (PMID:20935202), (PMID:22387553) RGD PMID:20935202 PMID:22387553 NCBI chr11:76,854,090...76,877,389
Ensembl chr11:76,854,090...76,877,389 		JBrowse link
G Btn2a2 butyrophilin, subfamily 2, member A2 acts_upstream_of_or_within ISO (PMID:23589618) RGD PMID:23589618 NCBI chr17:41,620,807...41,632,621
Ensembl chr17:41,620,839...41,632,618 		JBrowse link
G Carmil2 capping protein regulator and myosin 1 linker 2 acts_upstream_of_or_within ISO MGI:4462559|MGI:5547539 (PMID:23793062) RGD PMID:23793062 NCBI chr19:50,481,911...50,496,672
Ensembl chr19:33,574,257...33,586,965 		JBrowse link
G Cd46 CD46 molecule involved_in ISO (PMID:12540904) RGD PMID:12540904 NCBI chr13:109,104,122...109,134,903
Ensembl chr13:106,574,858...106,660,445 		JBrowse link
G Dusp10 dual specificity phosphatase 10 involved_in ISO (PMID:22387553) RGD PMID:22387553 NCBI chr13:98,145,317...98,183,304
Ensembl chr13:95,614,292...95,651,716 		JBrowse link
G Foxo3 forkhead box O3 involved_in ISO (PMID:30513302) RGD PMID:30513302 NCBI chr20:47,251,968...47,348,254
Ensembl chr20:45,672,995...45,764,561 		JBrowse link
G Foxp3 forkhead box P3 involved_in
acts_upstream_of_or_within		 ISO (PMID:30513302)
MGI:2654936 (PMID:12522256), (PMID:15100250), (PMID:15780990), (PMID:16769892), (PMID:17028180)		 RGD PMID:12522256 PMID:15100250 PMID:15780990 PMID:16769892 PMID:17028180 More... NCBI chr  X:17,580,380...17,601,181
Ensembl chr  X:14,908,494...14,923,838 		JBrowse link
G Il2 interleukin 2 IDA RGD PMID:6233372 RGD:1600097 NCBI chr 2:121,932,968...121,937,672
Ensembl chr 2:120,004,862...120,009,566 		JBrowse link
G Il4i1 interleukin 4 induced 1 involved_in ISO (PMID:25778793) RGD PMID:25778793 NCBI chr 1:104,435,540...104,461,049
Ensembl chr 1:95,295,601...95,324,562 		JBrowse link
G Kat5 lysine acetyltransferase 5 involved_in ISS
ISO
IEA		 GO_REF:0000024
(PMID:24835996)
GO_REF:0000107		 UniProt
RGD
Ensembl		 PMID:24835996 GO_REF:0000024 GO_REF:0000107 NCBI chr 1:212,325,089...212,332,640
Ensembl chr 1:202,895,751...202,903,458 		JBrowse link
G Lgals9 galectin 9 involved_in ISO (PMID:25065622) RGD PMID:25065622 NCBI chr10:64,405,044...64,428,249
Ensembl chr10:63,907,018...63,930,045 		JBrowse link
G Lilrb4 leukocyte immunoglobulin like receptor B4 involved_in ISO (PMID:20935202), (PMID:22387553) RGD PMID:20935202 PMID:22387553 NCBI chr 1:78,847,685...78,853,294
Ensembl chr 1:69,805,250...69,810,660 		JBrowse link
G Mir214 microRNA 214 IMP RGD PMID:30287503 RGD:38549580 NCBI chr13:74,588,374...74,588,481
Ensembl chr13:74,588,372...74,588,481 		JBrowse link
G RT1-M3-1 RT1 class Ib, locus M3, gene 1 involved_in ISO (PMID:20448110) RGD PMID:20448110 NCBI chr20:1,329,227...1,333,394
Ensembl chr20:1,287,521...1,328,117 		JBrowse link
G Socs1 suppressor of cytokine signaling 1 involved_in ISO
IEA		 (PMID:22387553)
GO_REF:0000107		 RGD
Ensembl		 PMID:22387553 GO_REF:0000107 NCBI chr10:5,389,574...5,391,265
Ensembl chr10:4,882,560...4,884,383 		JBrowse link
G Sox12 SRY-box transcription factor 12 involved_in ISO (PMID:30190287) RGD PMID:30190287 NCBI chr 3:140,859,499...140,860,518
Ensembl chr 3:140,856,579...140,860,975 		JBrowse link
G Tgfb1 transforming growth factor, beta 1 involved_in ISO (PMID:25065622) RGD PMID:25065622 NCBI chr 1:90,324,312...90,340,627
Ensembl chr 1:81,196,532...81,212,847 		JBrowse link
G Vsir V-set immunoregulatory receptor involved_in ISO (PMID:24691993) RGD PMID:24691993 NCBI chr20:28,824,493...28,850,175
Ensembl chr20:28,281,596...28,303,878 		JBrowse link
positive regulation of T cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ada adenosine deaminase acts_upstream_of_or_within ISO MGI:1857117|MGI:2683027 (PMID:7731963), (PMID:9478961) RGD PMID:7731963 PMID:9478961 NCBI chr 3:172,818,174...172,842,283
Ensembl chr 3:152,398,747...152,447,088 		JBrowse link
G Bad BCL2-associated agonist of cell death involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:3029528 (PMID:12431371)		 Ensembl
RGD		 PMID:12431371 GO_REF:0000107 NCBI chr 1:213,562,719...213,572,034
Ensembl chr 1:204,131,501...204,142,823 		JBrowse link
G Cd27 CD27 molecule involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 4:158,030,700...158,035,862
Ensembl chr 4:158,030,703...158,035,592 		JBrowse link
G Cd74 CD74 molecule acts_upstream_of_or_within ISO MGI:1927205|MGI:1927530 (PMID:7679955), (PMID:8598040), (PMID:9432982) RGD PMID:7679955 PMID:8598040 PMID:9432982 NCBI chr18:56,527,071...56,536,406
Ensembl chr18:54,256,778...54,266,003 		JBrowse link
G Cyld CYLD lysine 63 deubiquitinase acts_upstream_of_or_within ISO MGI:3664438 (PMID:16501569) RGD PMID:16501569 NCBI chr19:34,487,491...34,547,311
Ensembl chr19:18,314,019...18,373,658 		JBrowse link
G Gata3 GATA binding protein 3 involved_in ISO (PMID:20696860) RGD PMID:20696860 NCBI chr17:73,544,234...73,575,670
Ensembl chr17:68,643,873...68,665,391 		JBrowse link
G Il12a interleukin 12A acts_upstream_of_or_within ISO MGI:1916927 (PMID:22968459) RGD PMID:22968459 NCBI chr 2:155,275,734...155,282,997
Ensembl chr 2:152,965,769...152,972,734 		JBrowse link
G Il1rl2 interleukin 1 receptor-like 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
(PMID:22968459)		 Ensembl
RGD		 PMID:22968459 GO_REF:0000107 NCBI chr 9:42,591,658...42,639,351
Ensembl chr 9:42,591,934...42,636,667 		JBrowse link
G Il2 interleukin 2 IDA RGD PMID:9352365 RGD:1600138 NCBI chr 2:121,932,968...121,937,672
Ensembl chr 2:120,004,862...120,009,566 		JBrowse link
G Il2ra interleukin 2 receptor subunit alpha IMP RGD PMID:9352365 RGD:1600138 NCBI chr17:71,759,802...71,808,475
Ensembl chr17:66,849,974...66,898,697 		JBrowse link
G Il36b interleukin 36, beta involved_in
acts_upstream_of_or_within		 IBA
ISO		 GO_REF:0000033
MGI:96539 (PMID:22968459)		 GO_Central
RGD		 PMID:22968459 GO_REF:0000033 NCBI chr 3:27,422,980...27,521,344
Ensembl chr 3:7,021,973...7,031,619 		JBrowse link
G Il4 interleukin 4 involved_in ISO (PMID:20554961) RGD PMID:20554961 NCBI chr10:38,272,003...38,277,549
Ensembl chr10:37,771,203...37,776,750 		JBrowse link
G Il7 interleukin 7 involved_in
acts_upstream_of_or_within		 IEA
ISO
ISS		 GO_REF:0000107
(PMID:12431371)
GO_REF:0000024		 Ensembl
RGD
UniProt		 PMID:12431371 GO_REF:0000024 GO_REF:0000107 NCBI chr 2:96,142,523...96,186,282
Ensembl chr 2:94,234,766...94,280,075 		JBrowse link
G Mdk midkine involved_in ISS
ISO
IEA		 GO_REF:0000024
(PMID:28183532)
GO_REF:0000107		 UniProt
RGD
Ensembl		 PMID:28183532 GO_REF:0000024 GO_REF:0000107 NCBI chr 3:98,356,789...98,358,960
Ensembl chr 3:77,901,158...77,903,130 		JBrowse link
G Pik3r6 phosphoinositide-3-kinase, regulatory subunit 6 involved_in ISO (PMID:12707323) RGD PMID:12707323 NCBI chr10:53,702,821...53,754,113
Ensembl chr10:53,205,496...53,255,243 		JBrowse link
G Ptprc protein tyrosine phosphatase, receptor type, C acts_upstream_of_or_within ISO MGI:1857277 (PMID:8666928) RGD PMID:8666928 NCBI chr13:52,147,717...52,259,810
Ensembl chr13:49,596,193...49,708,692 		JBrowse link
G Rag1 recombination activating 1 involved_in ISO (PMID:1547488) RGD PMID:1547488 NCBI chr 3:108,372,087...108,383,184
Ensembl chr 3:87,917,004...87,928,291 		JBrowse link
G Rhoh ras homolog family member H involved_in ISO (PMID:22850876) RGD PMID:22850876 NCBI chr14:42,694,860...42,725,690
Ensembl chr14:42,337,751...42,386,369 		JBrowse link
G RT1-Ba RT1 class II, locus Ba involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
(PMID:8598041)		 Ensembl
RGD		 PMID:8598041 GO_REF:0000107 NCBI chr20:4,577,057...4,581,650
Ensembl chr20:4,575,134...4,579,744 		JBrowse link
G RT1-DMa RT1 class II, locus DMa acts_upstream_of_or_within ISO MGI:1861933|MGI:2384509|MGI:2652160 (PMID:8598040), (PMID:8598041), (PMID:8638109), (PMID:9432982) RGD PMID:8598040 PMID:8598041 PMID:8638109 PMID:9432982 NCBI chr20:4,707,028...4,710,432
Ensembl chr20:4,707,028...4,710,432 		JBrowse link
G Wnt10b Wnt family member 10B acts_upstream_of_or_within ISO (PMID:19723499) RGD PMID:19723499 NCBI chr 7:131,801,046...131,806,850
Ensembl chr 7:129,922,088...129,927,892 		JBrowse link
G Xbp1 X-box binding protein 1 involved_in ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
(PMID:11460154)		 UniProt
Ensembl
RGD		 PMID:11460154 GO_REF:0000024 GO_REF:0000107 NCBI chr14:84,604,623...84,609,707
Ensembl chr14:80,390,643...80,395,693 		JBrowse link
G Zap70 zeta chain of T cell receptor associated protein kinase 70 acts_upstream_of_or_within ISO (PMID:7630421)
MGI:2677447|MGI:3526403 (PMID:9208839)		 RGD PMID:7630421 PMID:9208839 NCBI chr 9:46,485,605...46,507,552
Ensembl chr 9:38,989,750...39,011,700 		JBrowse link
G Zbtb1 zinc finger and BTB domain containing 1 involved_in ISO (PMID:22201126) RGD PMID:22201126 NCBI chr 6:100,832,506...100,864,019
Ensembl chr 6:95,096,387...95,118,996 		JBrowse link
G Zmiz1 zinc finger, MIZ-type containing 1 involved_in ISO (PMID:26522984) RGD PMID:26522984 NCBI chr16:1,033,983...1,239,425
Ensembl chr16:1,027,325...1,232,597 		JBrowse link
positive regulation of T cell differentiation in thymus term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ada adenosine deaminase involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:1857117|MGI:2683027 (PMID:11067867), (PMID:11435465), (PMID:12163459), (PMID:16670300)		 Ensembl
RGD		 PMID:11067867 PMID:11435465 PMID:12163459 PMID:16670300 GO_REF:0000107 NCBI chr 3:172,818,174...172,842,283
Ensembl chr 3:152,398,747...152,447,088 		JBrowse link
G Adam8 ADAM metallopeptidase domain 8 involved_in ISO (PMID:20856819) RGD PMID:20856819 NCBI chr 1:204,206,206...204,218,988
Ensembl chr 1:194,770,060...194,788,801 		JBrowse link
G Egr3 early growth response 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
(PMID:21737317)		 Ensembl
RGD		 PMID:21737317 GO_REF:0000107 NCBI chr15:51,560,482...51,565,778
Ensembl chr15:45,150,567...45,154,627 		JBrowse link
G Ihh Indian hedgehog signaling molecule involved_in ISO (PMID:19109233) RGD PMID:19109233 NCBI chr 9:83,952,986...83,959,203
Ensembl chr 9:76,504,315...76,510,532 		JBrowse link
G Il2rg interleukin 2 receptor subunit gamma acts_upstream_of_or_within ISO MGI:1857455|MGI:2429736 (PMID:9252128), (PMID:9916699) RGD PMID:9252128 PMID:9916699 NCBI chr  X:66,395,330...66,399,026
Ensembl chr  X:66,392,542...66,399,823 		JBrowse link
G Il7r interleukin 7 receptor acts_upstream_of_or_within ISO MGI:1857198 (PMID:9215626) RGD PMID:9215626 NCBI chr 2:60,179,561...60,204,937
Ensembl chr 2:58,454,217...58,477,757 		JBrowse link
G Rasgrp1 RAS guanyl releasing protein 1 involved_in IEA
ISO		 GO_REF:0000107
(PMID:11017103)		 Ensembl
RGD		 PMID:11017103 GO_REF:0000107 NCBI chr 3:124,624,039...124,684,079
Ensembl chr 3:104,170,013...104,230,056 		JBrowse link
G Shh sonic hedgehog signaling molecule involved_in ISS
ISO
IEA		 GO_REF:0000024
(PMID:19109233)
GO_REF:0000107		 UniProt
RGD
Ensembl		 PMID:19109233 GO_REF:0000024 GO_REF:0000107 NCBI chr 4:7,687,872...7,697,025
Ensembl chr 4:6,954,017...6,963,170 		JBrowse link
G Vnn1 vanin 1 involved_in ISO (PMID:8934567) RGD PMID:8934567 NCBI chr 1:23,356,324...23,366,629
Ensembl chr 1:21,537,094...21,547,395 		JBrowse link
positive regulation of T-helper 1 cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Anxa1 annexin A1 involved_in ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
(PMID:17008549)		 UniProt
Ensembl
RGD		 PMID:17008549 GO_REF:0000024 GO_REF:0000107 NCBI chr 1:227,287,713...227,306,739
Ensembl chr 1:217,861,175...217,877,343 		JBrowse link
G Ccl19 C-C motif chemokine ligand 19 involved_in ISO (PMID:15845453) RGD PMID:15845453 NCBI chr 5:61,759,220...61,761,164
Ensembl chr 5:56,963,364...56,965,308 		JBrowse link
G Hlx H2.0-like homeobox acts_upstream_of_or_within ISO MGI:105367|MGI:2182089 (PMID:16424184) RGD PMID:16424184 NCBI chr13:98,811,852...98,817,264
Ensembl chr13:96,280,339...96,285,750 		JBrowse link
G Ripk2 receptor-interacting serine-threonine kinase 2 acts_upstream_of_or_within ISO MGI:2446070 (PMID:11894097) RGD PMID:11894097 NCBI chr 5:34,428,573...34,459,808
Ensembl chr 5:29,631,570...29,662,657 		JBrowse link
G Socs5 suppressor of cytokine signaling 5 involved_in ISO (PMID:12242343) RGD PMID:12242343 NCBI chr 6:7,481,039...7,512,644
Ensembl chr 6:7,481,095...7,514,834 		JBrowse link
positive regulation of T-helper 17 cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Malt1 MALT1 paracaspase involved_in ISO (PMID:25282160) RGD PMID:25282160 NCBI chr18:61,212,290...61,266,272
Ensembl chr18:58,942,299...58,994,260 		JBrowse link
G Mir326 microRNA 326 acts_upstream_of_or_within ISO (PMID:19838199) RGD PMID:19838199 NCBI chr 1:163,266,165...163,266,259
Ensembl chr 1:153,854,029...153,854,123 		JBrowse link
G Nfkbid NFKB inhibitor delta involved_in ISO (PMID:25282160) RGD PMID:25282160 NCBI chr 1:85,679,353...85,690,415
Ensembl chr 1:85,680,861...85,690,447 		JBrowse link
G Nfkbiz NFKB inhibitor zeta involved_in ISO (PMID:25282160) RGD PMID:25282160 NCBI chr11:58,251,720...58,279,767
Ensembl chr11:44,782,676...44,810,723 		JBrowse link
G Nlrp3 NLR family, pyrin domain containing 3 involved_in ISO (PMID:26098997) RGD PMID:26098997 NCBI chr10:44,826,299...44,853,373
Ensembl chr10:44,328,566...44,352,811 		JBrowse link
positive regulation of T-helper 17 cell lineage commitment term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Brd2 bromodomain containing 2 involved_in ISS
ISO		 GO_REF:0000024
(PMID:28262505)		 UniProt
RGD		 PMID:28262505 GO_REF:0000024 NCBI chr20:4,728,282...4,737,286
Ensembl chr20:4,728,151...4,735,388 		JBrowse link
G Brd4 bromodomain containing 4 involved_in ISO (PMID:28262505) RGD PMID:28262505 NCBI chr 7:11,866,997...11,946,575
Ensembl chr 7:11,216,446...11,295,539 		JBrowse link
G Ep300 E1A binding protein p300 involved_in ISO (PMID:28262505) RGD PMID:28262505 NCBI chr 7:114,987,857...115,058,652
Ensembl chr 7:113,106,247...113,136,088
Ensembl chr 7:113,106,247...113,136,088 		JBrowse link
G Il23a interleukin 23 subunit alpha involved_in IBA
ISO		 GO_REF:0000033
(PMID:19501566)		 GO_Central
RGD		 PMID:19501566 GO_REF:0000033 NCBI chr 7:1,306,320...1,308,434
Ensembl chr 7:721,809...723,923 		JBrowse link
G Opa1 OPA1, mitochondrial dynamin like GTPase involved_in ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
(PMID:36171294)		 UniProt
Ensembl
RGD		 PMID:36171294 GO_REF:0000024 GO_REF:0000107 NCBI chr11:84,612,943...84,690,025
Ensembl chr11:71,109,873...71,185,109 		JBrowse link
positive regulation of T-helper 2 cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Il18 interleukin 18 involved_in IEA
ISO		 GO_REF:0000107
(PMID:12829194)		 Ensembl
RGD		 PMID:12829194 GO_REF:0000107 NCBI chr 8:59,802,072...59,829,275
Ensembl chr 8:50,906,960...50,932,887 		JBrowse link
G Il4r interleukin 4 receptor acts_upstream_of_or_within ISO MGI:96109 (PMID:16424184) RGD PMID:16424184 NCBI chr 1:189,545,739...189,570,639
Ensembl chr 1:180,115,120...180,139,980 		JBrowse link
G Il6 interleukin 6 acts_upstream_of_or_within ISO (PMID:12594267) RGD PMID:12594267 NCBI chr 4:5,889,999...5,894,575
Ensembl chr 4:5,213,394...5,219,178 		JBrowse link
G Nlrp3 NLR family, pyrin domain containing 3 involved_in ISO (PMID:26098997) RGD PMID:26098997 NCBI chr10:44,826,299...44,853,373
Ensembl chr10:44,328,566...44,352,811 		JBrowse link
G Prkcz protein kinase C, zeta involved_in ISS
ISO		 GO_REF:0000024
(PMID:15987782)		 UniProt
RGD		 PMID:15987782 GO_REF:0000024 NCBI chr 5:171,101,774...171,212,694
Ensembl chr 5:165,819,466...165,930,367 		JBrowse link
G Rara retinoic acid receptor, alpha involved_in ISO (PMID:18416830) RGD PMID:18416830 NCBI chr10:84,379,780...84,424,371
Ensembl chr10:83,893,384...83,928,142 		JBrowse link
G Tnfsf4 TNF superfamily member 4 involved_in ISO (PMID:18354165) RGD PMID:18354165 NCBI chr13:76,256,654...76,280,133
Ensembl chr13:73,723,329...73,746,788 		JBrowse link
positive regulation of T-helper cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Shb SH2 domain containing adaptor protein B acts_upstream_of_or_within ISO MGI:3721903 (PMID:24645804) RGD PMID:24645804 NCBI chr 5:64,473,694...64,581,072
Ensembl chr 5:59,678,216...59,785,538 		JBrowse link
positive T cell selection term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bcl11b BCL11 transcription factor B acts_upstream_of_or_within ISO MGI:3767620 (PMID:17998389) RGD PMID:17998389 NCBI chr 6:132,598,968...132,692,123
Ensembl chr 6:126,834,531...126,928,224 		JBrowse link
G Braf B-Raf proto-oncogene, serine/threonine kinase acts_upstream_of_or_within ISO MGI:3711006 (PMID:23334952) RGD PMID:23334952 NCBI chr 4:69,329,772...69,476,931
Ensembl chr 4:68,384,649...68,510,463 		JBrowse link
G Themis thymocyte selection associated involved_in ISO (PMID:19597497), (PMID:19597498), (PMID:19597499), (PMID:19805304) RGD PMID:19597497 PMID:19597498 PMID:19597499 PMID:19805304 NCBI chr 1:18,251,136...18,483,851
Ensembl chr 1:16,432,631...16,664,329 		JBrowse link
positive thymic T cell selection term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cd1d1 CD1d1 molecule acts_upstream_of_or_within ISO MGI:2180711 (PMID:9133426) RGD PMID:9133426 NCBI chr 2:174,721,522...174,725,029
Ensembl chr 2:172,423,582...172,427,089 		JBrowse link
G Cd3d CD3 delta subunit of T-cell receptor complex involved_in ISS
ISO
IBA		 GO_REF:0000024
(PMID:9135151)
GO_REF:0000033		 UniProt
RGD
GO_Central		 PMID:9135151 GO_REF:0000024 GO_REF:0000033 NCBI chr 8:54,184,573...54,190,112
Ensembl chr 8:45,288,749...45,301,809 		JBrowse link
G Cd3e CD3 epsilon subunit of T-cell receptor complex involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 8:54,200,617...54,211,770
Ensembl chr 8:45,303,852...45,315,022 		JBrowse link
G Cd3g CD3 gamma subunit of T-cell receptor complex involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 8:54,177,572...54,184,087
Ensembl chr 8:45,281,204...45,287,147 		JBrowse link
G Cd74 CD74 molecule acts_upstream_of_or_within ISO MGI:1927205|MGI:1927530 (PMID:7679955), (PMID:8598040), (PMID:9432982) RGD PMID:7679955 PMID:8598040 PMID:9432982 NCBI chr18:56,527,071...56,536,406
Ensembl chr18:54,256,778...54,266,003 		JBrowse link
G Dock2 dedicator of cytokinesis 2 acts_upstream_of_or_within ISO MGI:2152031 (PMID:12871644) RGD PMID:12871644 NCBI chr10:18,827,237...19,244,832
Ensembl chr10:18,827,239...19,244,808 		JBrowse link
G Itpkb inositol-trisphosphate 3-kinase B acts_upstream_of_or_within ISO MGI:3039799 (PMID:15064401) RGD PMID:15064401 NCBI chr13:94,601,072...94,696,180
Ensembl chr13:92,069,216...92,162,004 		JBrowse link
G Nfatc3 nuclear factor of activated T-cells 3 involved_in ISS
ISO		 GO_REF:0000024
(PMID:17579027)		 UniProt
RGD		 PMID:17579027 GO_REF:0000024 NCBI chr19:50,870,464...50,944,992
Ensembl chr19:33,960,852...34,035,150 		JBrowse link
G Ptprc protein tyrosine phosphatase, receptor type, C acts_upstream_of_or_within ISO MGI:1857277 (PMID:8666928) RGD PMID:8666928 NCBI chr13:52,147,717...52,259,810
Ensembl chr13:49,596,193...49,708,692 		JBrowse link
G RT1-DMa RT1 class II, locus DMa acts_upstream_of_or_within ISO MGI:1861933|MGI:2384509|MGI:2652160 (PMID:8598040), (PMID:8598041), (PMID:8638109), (PMID:9432982) RGD PMID:8598040 PMID:8598041 PMID:8638109 PMID:9432982 NCBI chr20:4,707,028...4,710,432
Ensembl chr20:4,707,028...4,710,432 		JBrowse link
G Shh sonic hedgehog signaling molecule involved_in IEA
ISO
ISS		 GO_REF:0000107
(PMID:17227833)
GO_REF:0000024		 Ensembl
RGD
UniProt		 PMID:17227833 GO_REF:0000024 GO_REF:0000107 NCBI chr 4:7,687,872...7,697,025
Ensembl chr 4:6,954,017...6,963,170 		JBrowse link
G Srf serum response factor acts_upstream_of_or_within ISO MGI:2449947|MGI:3046779 (PMID:21098124) RGD PMID:21098124 NCBI chr 9:21,924,050...21,933,338
Ensembl chr 9:14,426,472...14,435,733 		JBrowse link
G Stk11 serine/threonine kinase 11 acts_upstream_of_or_within ISO MGI:2386448|MGI:2387402|MGI:3054844 (PMID:21487392) RGD PMID:21487392 NCBI chr 7:10,225,204...10,241,965
Ensembl chr 7:9,575,269...9,591,315 		JBrowse link
G Zap70 zeta chain of T cell receptor associated protein kinase 70 acts_upstream_of_or_within ISO (PMID:7630421)
MGI:2677447 (PMID:7630421)		 RGD PMID:7630421 NCBI chr 9:46,485,605...46,507,552
Ensembl chr 9:38,989,750...39,011,700 		JBrowse link
pre-B cell allelic exclusion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atm ATM serine/threonine kinase involved_in ISO (PMID:19448632) RGD PMID:19448632 NCBI chr 8:62,724,939...62,829,040
Ensembl chr 8:53,831,093...53,932,437 		JBrowse link
G Rag1 recombination activating 1 involved_in IBA
ISO		 GO_REF:0000033
(PMID:19448632)		 GO_Central
RGD		 PMID:19448632 GO_REF:0000033 NCBI chr 3:108,372,087...108,383,184
Ensembl chr 3:87,917,004...87,928,291 		JBrowse link
G Rag2 recombination activating 2 involved_in ISO (PMID:19448632) RGD PMID:19448632 NCBI chr 3:108,357,399...108,367,186
Ensembl chr 3:87,902,238...87,911,066 		JBrowse link
pre-B cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atp11c ATPase phospholipid transporting 11C involved_in ISO (PMID:21423173) RGD PMID:21423173 NCBI chr  X:143,600,763...143,788,407
Ensembl chr  X:138,565,836...138,751,204 		JBrowse link
G Cd24 CD24 molecule acts_upstream_of_or_within ISO MGI:2179996 (PMID:7795661), (PMID:9028339) RGD PMID:7795661 PMID:9028339 NCBI chr20:48,655,549...48,661,786
Ensembl chr20:47,073,512...47,079,662 		JBrowse link
G Foxp1 forkhead box P1 acts_upstream_of_or_within ISO MGI:3711150 (PMID:16819554) RGD PMID:16819554 NCBI chr 4:133,117,346...133,808,647
Ensembl chr 4:131,564,756...132,112,258 		JBrowse link
G Lrrc8a leucine rich repeat containing 8 VRAC subunit A involved_in ISS
ISO		 GO_REF:0000024
(PMID:14660746)		 UniProt
RGD		 PMID:14660746 GO_REF:0000024 NCBI chr 3:13,509,577...13,537,174
Ensembl chr 3:13,510,513...13,536,202 		JBrowse link
G Mir17 microRNA 17 acts_upstream_of_or_within ISO MGI:2676844|MGI:2676872|MGI:3618743|MGI:3629917|MGI:3629918 (PMID:18329372) RGD PMID:18329372 NCBI chr15:98,587,848...98,587,931
Ensembl chr15:92,180,629...92,180,712 		JBrowse link
G Mir18a microRNA 18a acts_upstream_of_or_within ISO MGI:2676872|MGI:3618743|MGI:3619065|MGI:3629917|MGI:3629918 (PMID:18329372) RGD PMID:18329372 NCBI chr15:98,587,984...98,588,079
Ensembl chr15:92,180,765...92,180,860 		JBrowse link
G Mir19a microRNA 19a acts_upstream_of_or_within ISO MGI:2676844|MGI:2676872|MGI:3619065|MGI:3629917|MGI:3629918 (PMID:18329372) RGD PMID:18329372 NCBI chr15:98,588,131...98,588,212
Ensembl chr15:92,180,912...92,180,993 		JBrowse link
G Mir19b1 microRNA 19b-1 acts_upstream_of_or_within ISO MGI:2676844|MGI:2676872|MGI:3618743|MGI:3619065|MGI:3629918 (PMID:18329372) RGD PMID:18329372 NCBI chr15:98,588,433...98,588,519
Ensembl chr15:92,181,214...92,181,300 		JBrowse link
G Mir20a microRNA 20a acts_upstream_of_or_within ISO MGI:2676844|MGI:3618743|MGI:3619065|MGI:3629917|MGI:3629918 (PMID:18329372) RGD PMID:18329372 NCBI chr15:98,588,303...98,588,387
Ensembl chr15:92,181,084...92,181,168 		JBrowse link
G Mir92a1 microRNA 92a-1 acts_upstream_of_or_within ISO MGI:2676844|MGI:2676872|MGI:3618743|MGI:3619065|MGI:3629917 (PMID:18329372) RGD PMID:18329372 NCBI chr15:98,588,555...98,588,632
Ensembl chr15:92,181,336...92,181,413 		JBrowse link
pro-T cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Flt3 Fms related receptor tyrosine kinase 3 acts_upstream_of_or_within ISO MGI:2384051 (PMID:7621074) RGD PMID:7621074 NCBI chr12:12,660,035...12,735,584
Ensembl chr12:7,623,930...7,699,474 		JBrowse link
G Gata3 GATA binding protein 3 acts_upstream_of_or_within ISO MGI:2181200|MGI:3696958|MGI:4418042 (PMID:19934022) RGD PMID:19934022 NCBI chr17:73,544,234...73,575,670
Ensembl chr17:68,643,873...68,665,391 		JBrowse link
G Spi1 Spi-1 proto-oncogene involved_in ISO (PMID:30171019) RGD PMID:30171019 NCBI chr 3:97,529,509...97,548,204
Ensembl chr 3:77,073,012...77,092,393 		JBrowse link
regulation of alpha-beta T cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ankle1 ankyrin repeat and LEM domain containing 1 NOT|involved_in ISO (PMID:27010503) RGD PMID:27010503 NCBI chr16:18,076,413...18,082,356
Ensembl chr16:18,076,492...18,083,729 		JBrowse link
regulation of B cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ankle1 ankyrin repeat and LEM domain containing 1 NOT|involved_in ISO (PMID:27010503) RGD PMID:27010503 NCBI chr16:18,076,413...18,082,356
Ensembl chr16:18,076,492...18,083,729 		JBrowse link
G Card11 caspase recruitment domain family, member 11 acts_upstream_of_or_within ISO MGI:3039682 (PMID:12867038) RGD PMID:12867038 NCBI chr12:13,621,140...13,758,115
Ensembl chr12:13,621,087...13,758,112 		JBrowse link
G Cd24 CD24 molecule acts_upstream_of_or_within ISO MGI:2179996 (PMID:7795661), (PMID:9028339) RGD PMID:7795661 PMID:9028339 NCBI chr20:48,655,549...48,661,786
Ensembl chr20:47,073,512...47,079,662 		JBrowse link
G Cyld CYLD lysine 63 deubiquitinase acts_upstream_of_or_within ISO MGI:3664438 (PMID:16501569) RGD PMID:16501569 NCBI chr19:34,487,491...34,547,311
Ensembl chr19:18,314,019...18,373,658 		JBrowse link
G Fas Fas cell surface death receptor acts_upstream_of_or_within ISO MGI:1856334 (PMID:6610701) RGD PMID:6610701 NCBI chr 1:241,212,155...241,245,774
Ensembl chr 1:231,798,960...231,832,591 		JBrowse link
G Ikzf3 IKAROS family zinc finger 3 involved_in ISO (PMID:9806640) RGD PMID:9806640 NCBI chr10:83,956,850...84,049,861
Ensembl chr10:83,465,745...83,553,591 		JBrowse link
G Il4i1 interleukin 4 induced 1 involved_in ISO (PMID:29288206) RGD PMID:29288206 NCBI chr 1:104,435,540...104,461,049
Ensembl chr 1:95,295,601...95,324,562 		JBrowse link
G Mir150 microRNA 150 acts_upstream_of_or_within ISO MGI:3763431 (PMID:17927961) RGD PMID:17927961 NCBI chr 1:104,741,487...104,741,571
Ensembl chr 1:95,605,024...95,605,108 		JBrowse link
G Nfam1 NFAT activating protein with ITAM motif 1 acts_upstream_of_or_within ISO (PMID:15143214) RGD PMID:15143214 NCBI chr 7:114,139,318...114,175,395
Ensembl chr 7:114,139,345...114,175,442 		JBrowse link
G Ptpn6 protein tyrosine phosphatase, non-receptor type 6 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:1856074 (PMID:9254656)		 Ensembl
RGD		 PMID:9254656 GO_REF:0000107 NCBI chr 4:159,212,320...159,237,069
Ensembl chr 4:157,526,035...157,550,984 		JBrowse link
G Slamf8 SLAM family member 8 involved_in ISO (PMID:11313408) RGD PMID:11313408 NCBI chr13:87,580,081...87,589,941
Ensembl chr13:85,047,727...85,057,211 		JBrowse link
G Tlr9 toll-like receptor 9 involved_in ISO (PMID:23857366) RGD PMID:23857366 NCBI chr 8:115,743,407...115,747,523
Ensembl chr 8:106,864,680...106,868,796 		JBrowse link
G Zfp36l1 zinc finger protein 36, C3H type-like 1 involved_in ISS
ISO		 GO_REF:0000024
(PMID:27102483)		 UniProt
RGD		 PMID:27102483 GO_REF:0000024 NCBI chr 6:104,663,396...104,669,815
Ensembl chr 6:98,930,718...98,935,748 		JBrowse link
G Zfp36l2 zinc finger protein 36, C3H type-like 2 involved_in ISO (PMID:27102483) RGD PMID:27102483 NCBI chr 6:16,242,622...16,246,662
Ensembl chr 6:10,490,032...10,494,064 		JBrowse link
regulation of CD4-positive, alpha-beta T cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Sh3rf1 SH3 domain containing ring finger 1 involved_in ISS
ISO		 GO_REF:0000024
(PMID:27084103)		 UniProt
RGD		 PMID:27084103 GO_REF:0000024 NCBI chr16:28,735,522...28,901,261
Ensembl chr16:28,735,440...28,901,644 		JBrowse link
regulation of CD4-positive, CD25-positive, alpha-beta regulatory T cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Kcnk18 potassium two pore domain channel subfamily K member 18 involved_in ISS
ISO		 GO_REF:0000024
(PMID:34702947)		 UniProt
RGD		 PMID:34702947 GO_REF:0000024 NCBI chr 1:258,374,671...258,388,945
Ensembl chr 1:258,374,671...258,388,945 		JBrowse link
regulation of CD8-positive, alpha-beta T cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Zbtb7b zinc finger and BTB domain containing 7B acts_upstream_of_or_within ISO MGI:3817628 (PMID:18776904) RGD PMID:18776904 NCBI chr 2:177,093,569...177,111,894
Ensembl chr 2:174,797,453...174,814,236 		JBrowse link
regulation of extrathymic T cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Prdm1 PR/SET domain 1 involved_in ISO (PMID:27102484) RGD PMID:27102484 NCBI chr20:49,542,465...49,564,088
Ensembl chr20:47,959,858...47,981,488 		JBrowse link
G Zfp683 zinc finger protein 683 involved_in ISO (PMID:27102484) RGD PMID:27102484 NCBI chr 5:146,277,972...146,285,856
Ensembl chr 5:146,278,978...146,285,000 		JBrowse link
regulation of gamma-delta T cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Egr3 early growth response 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
(PMID:21737317)		 Ensembl
RGD		 PMID:21737317 GO_REF:0000107 NCBI chr15:51,560,482...51,565,778
Ensembl chr15:45,150,567...45,154,627 		JBrowse link
G Rorc RAR-related orphan receptor C acts_upstream_of_or_within ISO (PMID:21737317) RGD PMID:21737317 NCBI chr 2:184,698,779...184,723,942
Ensembl chr 2:182,009,286...182,034,907 		JBrowse link
G Sox13 SRY-box transcription factor 13 acts_upstream_of_or_within ISO (PMID:21737317) RGD PMID:21737317 NCBI chr13:47,383,145...47,427,572
Ensembl chr13:44,831,085...44,875,762 		JBrowse link
G Tcf7 transcription factor 7 involved_in ISO (PMID:23562159) RGD PMID:23562159 NCBI chr10:36,924,363...36,954,279
Ensembl chr10:36,423,445...36,453,535 		JBrowse link
regulation of immature T cell proliferation in thymus term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cd1d1 CD1d1 molecule involved_in ISO (PMID:11550008) RGD PMID:11550008 NCBI chr 2:174,721,522...174,725,029
Ensembl chr 2:172,423,582...172,427,089 		JBrowse link
G Tnfrsf9 TNF receptor superfamily member 9 acts_upstream_of_or_within ISO (PMID:8405064) RGD PMID:8405064 NCBI chr 5:166,664,494...166,690,834
Ensembl chr 5:161,381,662...161,408,000 		JBrowse link
G Tnfsf9 TNF superfamily member 9 acts_upstream_of_or_within ISO (PMID:8405064) RGD PMID:8405064 NCBI chr 9:1,944,017...1,946,351
Ensembl chr 9:1,944,017...1,946,345 		JBrowse link
regulation of lymphocyte differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ikzf3 IKAROS family zinc finger 3 involved_in ISO (PMID:9155026) RGD PMID:9155026 NCBI chr10:83,956,850...84,049,861
Ensembl chr10:83,465,745...83,553,591 		JBrowse link
G Ndfip1 Nedd4 family interacting protein 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:3695433 (PMID:17137798)		 Ensembl
RGD		 PMID:17137798 GO_REF:0000107 NCBI chr18:30,265,808...30,316,068
Ensembl chr18:30,250,613...30,322,311 		JBrowse link
G Rnf41 ring finger protein 41 acts_upstream_of_or_within ISO (PMID:18495327) RGD PMID:18495327 NCBI chr 7:838,160...876,869
Ensembl chr 7:838,203...865,511 		JBrowse link
regulation of memory T cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bcl6 BCL6, transcription repressor acts_upstream_of_or_within ISO MGI:2158436 (PMID:15240675) RGD PMID:15240675 NCBI chr11:76,854,090...76,877,389
Ensembl chr11:76,854,090...76,877,389 		JBrowse link
regulation of natural killer cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lgals9 galectin 9 involved_in ISO (PMID:23408620) RGD PMID:23408620 NCBI chr10:64,405,044...64,428,249
Ensembl chr10:63,907,018...63,930,045 		JBrowse link
G Prdm1 PR/SET domain 1 involved_in ISO (PMID:27102484) RGD PMID:27102484 NCBI chr20:49,542,465...49,564,088
Ensembl chr20:47,959,858...47,981,488 		JBrowse link
G Zfp683 zinc finger protein 683 involved_in ISO (PMID:27102484) RGD PMID:27102484 NCBI chr 5:146,277,972...146,285,856
Ensembl chr 5:146,278,978...146,285,000 		JBrowse link
regulation of natural killer cell differentiation involved in immune response term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Zfp683 zinc finger protein 683 involved_in ISO (PMID:22885984) RGD PMID:22885984 NCBI chr 5:146,277,972...146,285,856
Ensembl chr 5:146,278,978...146,285,000 		JBrowse link
regulation of NK T cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Prdm1 PR/SET domain 1 involved_in ISO (PMID:27102484) RGD PMID:27102484 NCBI chr20:49,542,465...49,564,088
Ensembl chr20:47,959,858...47,981,488 		JBrowse link
G Zfp683 zinc finger protein 683 involved_in ISO (PMID:27102484) RGD PMID:27102484 NCBI chr 5:146,277,972...146,285,856
Ensembl chr 5:146,278,978...146,285,000 		JBrowse link
regulation of positive thymic T cell selection term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Foxn1 forkhead box N1 involved_in ISO (PMID:24184560) RGD PMID:24184560 NCBI chr10:63,749,461...63,778,468
Ensembl chr10:63,251,400...63,273,710 		JBrowse link
G Tox thymocyte selection-associated high mobility group box involved_in ISO (PMID:18195075) RGD PMID:18195075 NCBI chr 5:24,672,487...24,968,754
Ensembl chr 5:19,874,467...20,171,272 		JBrowse link
regulation of regulatory T cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cd28 Cd28 molecule acts_upstream_of_or_within ISO MGI:96756|MGI:98725 (PMID:21245484) RGD PMID:21245484 NCBI chr 9:69,660,316...69,689,192
Ensembl chr 9:62,166,192...62,194,685 		JBrowse link
G Dicer1 dicer 1 ribonuclease III acts_upstream_of_or_within ISO (PMID:18725527) RGD PMID:18725527 NCBI chr 6:129,392,298...129,457,252
Ensembl chr 6:123,631,250...123,693,965 		JBrowse link
G Drosha drosha ribonuclease III acts_upstream_of_or_within ISO (PMID:18725527) RGD PMID:18725527 NCBI chr 2:63,591,885...63,703,688
Ensembl chr 2:61,864,970...61,976,688 		JBrowse link
G Fanca FA complementation group A involved_in
acts_upstream_of_or_within		 IBA
ISO		 GO_REF:0000033
MGI:2674094 (PMID:24501220)		 GO_Central
RGD		 PMID:24501220 GO_REF:0000033 NCBI chr19:51,304,126...51,362,586
Ensembl chr19:51,304,021...51,362,527 		JBrowse link
G Fancd2 FA complementation group D2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:2673422 (PMID:24501220)		 Ensembl
RGD		 PMID:24501220 GO_REF:0000107 NCBI chr 4:148,234,633...148,299,035
Ensembl chr 4:146,679,179...146,743,412 		JBrowse link
G Kat2a lysine acetyltransferase 2A involved_in ISO (PMID:28424240) RGD PMID:28424240 NCBI chr10:86,132,535...86,140,877
Ensembl chr10:85,632,216...85,640,166 		JBrowse link
G Lck LCK proto-oncogene, Src family tyrosine kinase acts_upstream_of_or_within ISO MGI:88327 (PMID:21245484) RGD PMID:21245484 NCBI chr 5:147,172,642...147,201,267
Ensembl chr 5:141,888,326...141,903,794 		JBrowse link
G Sh2b3 SH2B adaptor protein 3 IMP RGD PMID:25776069 RGD:13442483 NCBI chr12:40,391,755...40,414,336
Ensembl chr12:34,731,911...34,753,616 		JBrowse link
G Tgfb1 transforming growth factor, beta 1 acts_upstream_of_or_within ISO MGI:88327 (PMID:21245484) RGD PMID:21245484 NCBI chr 1:90,324,312...90,340,627
Ensembl chr 1:81,196,532...81,212,847 		JBrowse link
regulation of T cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abl1 ABL proto-oncogene 1, non-receptor tyrosine kinase involved_in ISO (PMID:21690296) RGD PMID:21690296 NCBI chr 3:35,377,587...35,480,843
Ensembl chr 3:14,979,853...15,083,065 		JBrowse link
G Ada adenosine deaminase acts_upstream_of_or_within ISO MGI:2155977 (PMID:7670465) RGD PMID:7670465 NCBI chr 3:172,818,174...172,842,283
Ensembl chr 3:152,398,747...152,447,088 		JBrowse link
G Braf B-Raf proto-oncogene, serine/threonine kinase acts_upstream_of_or_within ISO MGI:1857579 (PMID:18228248) RGD PMID:18228248 NCBI chr 4:69,329,772...69,476,931
Ensembl chr 4:68,384,649...68,510,463 		JBrowse link
G Card11 caspase recruitment domain family, member 11 acts_upstream_of_or_within ISO MGI:3039682 (PMID:12867038) RGD PMID:12867038 NCBI chr12:13,621,140...13,758,115
Ensembl chr12:13,621,087...13,758,112 		JBrowse link
G Ccr2 C-C motif chemokine receptor 2 involved_in ISS
ISO		 GO_REF:0000024
(PMID:28507030)		 UniProt
RGD		 PMID:28507030 GO_REF:0000024 NCBI chr 8:132,611,883...132,619,106
Ensembl chr 8:123,734,430...123,742,100 		JBrowse link
G Crtam cytotoxic and regulatory T cell molecule involved_in ISO (PMID:24687959) RGD PMID:24687959 NCBI chr 8:50,237,210...50,274,472
Ensembl chr 8:41,340,837...41,377,343 		JBrowse link
G Cyp26b1 cytochrome P450, family 26, subfamily b, polypeptide 1 acts_upstream_of_or_within ISO MGI:3764691 (PMID:23991089) RGD PMID:23991089 NCBI chr 4:118,599,356...118,616,176
Ensembl chr 4:117,041,808...117,058,628 		JBrowse link
G Dux4 double homeobox 4 acts_upstream_of_or_within ISO (PMID:17911620) RGD PMID:17911620 NCBI chr16:1,558,430...1,570,045
Ensembl chr16:1,558,766...1,568,565 		JBrowse link
G Fas Fas cell surface death receptor acts_upstream_of_or_within ISO MGI:1856334 (PMID:6610701) RGD PMID:6610701 NCBI chr 1:241,212,155...241,245,774
Ensembl chr 1:231,798,960...231,832,591 		JBrowse link
G Il15 interleukin 15 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:2136897 (PMID:10704459)		 Ensembl
RGD		 PMID:10704459 GO_REF:0000107 NCBI chr19:42,536,160...42,611,349
Ensembl chr19:25,640,251...25,706,820 		JBrowse link
G Mettl3 methyltransferase 3, N6-adenosine-methyltransferase complex catalytic subunit involved_in ISO (PMID:28792938) RGD PMID:28792938 NCBI chr15:27,476,659...27,491,134
Ensembl chr15:25,003,172...25,014,041 		JBrowse link
G Prelid1 PRELI domain containing 1 involved_in ISO (PMID:18945965) RGD PMID:18945965 NCBI chr17:9,310,471...9,313,511
Ensembl chr17:9,305,361...9,308,407 		JBrowse link
G Rag1 recombination activating 1 acts_upstream_of_or_within ISO MGI:1353616 (PMID:18684012) RGD PMID:18684012 NCBI chr 3:108,372,087...108,383,184
Ensembl chr 3:87,917,004...87,928,291 		JBrowse link
G RT1-DOa RT1 class II, locus DOa acts_upstream_of_or_within ISO MGI:2386294 (PMID:11069069) RGD PMID:11069069 NCBI chr20:4,755,287...4,758,491
Ensembl chr20:4,753,598...4,756,577 		JBrowse link
G Slc46a2 solute carrier family 46, member 2 acts_upstream_of_or_within ISO MGI:97848 (PMID:18684012) RGD PMID:18684012 NCBI chr 5:79,594,003...79,603,074
Ensembl chr 5:74,800,226...74,808,128 		JBrowse link
G Tbx21 T-box transcription factor 21 involved_in ISO (PMID:21690296) RGD PMID:21690296 NCBI chr10:82,578,751...82,595,253
Ensembl chr10:82,082,322...82,098,831 		JBrowse link
regulation of T cell differentiation in thymus term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ada adenosine deaminase IMP RGD PMID:3876160 RGD:152995412 NCBI chr 3:172,818,174...172,842,283
Ensembl chr 3:152,398,747...152,447,088 		JBrowse link
G Adrm1 ADRM1 26S proteasome ubiquitin receptor involved_in ISO (PMID:21048919) RGD PMID:21048919 NCBI chr 3:187,643,043...187,647,805
Ensembl chr 3:167,265,296...167,270,195 		JBrowse link
G Ankle1 ankyrin repeat and LEM domain containing 1 NOT|involved_in ISO (PMID:27010503) RGD PMID:27010503 NCBI chr16:18,076,413...18,082,356
Ensembl chr16:18,076,492...18,083,729 		JBrowse link
G Clptm1 CLPTM1 regulator of GABA type A receptor forward trafficking involved_in ISO (PMID:9218588) RGD PMID:9218588 NCBI chr 1:88,417,447...88,449,047
Ensembl chr 1:79,289,477...79,321,092 		JBrowse link
G Foxn1 forkhead box N1 acts_upstream_of_or_within ISO MGI:5297717 (PMID:22072979) RGD PMID:22072979 NCBI chr10:63,749,461...63,778,468
Ensembl chr10:63,251,400...63,273,710 		JBrowse link
G Lgals9 galectin 9 NOT|involved_in ISO (PMID:25065622) RGD PMID:25065622 NCBI chr10:64,405,044...64,428,249
Ensembl chr10:63,907,018...63,930,045 		JBrowse link
G Sos1 SOS Ras/Rac guanine nucleotide exchange factor 1 acts_upstream_of_or_within ISO MGI:98355 (PMID:24043312) RGD PMID:24043312 NCBI chr 6:20,286,117...20,363,350
Ensembl chr 6:14,533,360...14,611,107 		JBrowse link
G Sos2 SOS Ras/Rho guanine nucleotide exchange factor 2 acts_upstream_of_or_within ISO MGI:98354 (PMID:24043312) RGD PMID:24043312 NCBI chr 6:93,778,971...93,892,161
Ensembl chr 6:88,042,966...88,156,692 		JBrowse link
G Zeb1 zinc finger E-box binding homeobox 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:1857515|MGI:1857799 (PMID:9126927), (PMID:9389660)		 Ensembl
RGD		 PMID:9126927 PMID:9389660 GO_REF:0000107 NCBI chr17:56,644,397...56,811,155
Ensembl chr17:51,948,948...52,115,214 		JBrowse link
regulation of T-helper 1 cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Il27 interleukin 27 involved_in ISO
IBA		 (PMID:12734330)
GO_REF:0000033		 RGD
GO_Central		 PMID:12734330 GO_REF:0000033 NCBI chr 1:190,603,684...190,609,292
Ensembl chr 1:181,173,372...181,178,582 		JBrowse link
regulation of T-helper 17 cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ccl20 C-C motif chemokine ligand 20 NOT|involved_in ISO (PMID:19050256) RGD PMID:19050256 NCBI chr 9:91,837,139...91,839,736
Ensembl chr 9:84,388,904...84,391,629 		JBrowse link
G Ccr6 C-C motif chemokine receptor 6 NOT|involved_in ISO (PMID:19050256) RGD PMID:19050256 NCBI chr 1:55,022,037...55,055,857
Ensembl chr 1:52,474,168...52,498,603 		JBrowse link
G Mir301a microRNA 301a acts_upstream_of_or_within ISO (PMID:22517757) RGD PMID:22517757 NCBI chr10:72,422,599...72,422,698
Ensembl chr10:71,925,336...71,925,435 		JBrowse link
regulation of T-helper cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gata3 GATA binding protein 3 acts_upstream_of_or_within ISO MGI:3487291 (PMID:18776904) RGD PMID:18776904 NCBI chr17:73,544,234...73,575,670
Ensembl chr17:68,643,873...68,665,391 		JBrowse link
G Il12rb2 interleukin 12 receptor subunit beta 2 NAS RGD PMID:10651948 RGD:1331512 NCBI chr 4:97,756,089...97,844,937
Ensembl chr 4:96,426,842...96,515,289 		JBrowse link
G RT1-Da RT1 class II, locus Da involved_in ISO (PMID:15322540) RGD PMID:15322540 NCBI chr20:4,515,393...4,520,387
Ensembl chr20:4,512,911...4,518,455 		JBrowse link
G RT1-Db1 RT1 class II, locus Db1 involved_in ISO (PMID:15322540) RGD PMID:15322540 NCBI chr20:4,550,594...4,560,182
Ensembl chr20:4,548,666...4,558,258 		JBrowse link
G Zbtb7b zinc finger and BTB domain containing 7B acts_upstream_of_or_within ISO MGI:3817628 (PMID:18776904) RGD PMID:18776904 NCBI chr 2:177,093,569...177,111,894
Ensembl chr 2:174,797,453...174,814,236 		JBrowse link
regulatory T cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cd28 Cd28 molecule involved_in ISO
IEA		 (PMID:18641304)
GO_REF:0000107		 RGD
Ensembl		 PMID:18641304 GO_REF:0000107 NCBI chr 9:69,660,316...69,689,192
Ensembl chr 9:62,166,192...62,194,685 		JBrowse link
G Foxp3 forkhead box P3 involved_in
acts_upstream_of		 ISO (PMID:32644293)
(PMID:16769892), (PMID:17028180)		 RGD PMID:16769892 PMID:17028180 PMID:32644293 NCBI chr  X:17,580,380...17,601,181
Ensembl chr  X:14,908,494...14,923,838 		JBrowse link
G Tgfb1 transforming growth factor, beta 1 involved_in
acts_upstream_of_or_within		 ISO (PMID:32644293)
MGI:3576270|MGI:3719583 (PMID:15100250), (PMID:17481928)		 RGD PMID:15100250 PMID:17481928 PMID:32644293 NCBI chr 1:90,324,312...90,340,627
Ensembl chr 1:81,196,532...81,212,847 		JBrowse link
G Usp44 ubiquitin specific peptidase 44 involved_in ISO (PMID:32644293) RGD PMID:32644293 NCBI chr 7:30,251,142...30,301,185
Ensembl chr 7:28,364,033...28,410,053 		JBrowse link
T cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ada adenosine deaminase acts_upstream_of ISO MGI:1857117|MGI:2683027 (PMID:7731963), (PMID:9478961) RGD PMID:7731963 PMID:9478961 NCBI chr 3:172,818,174...172,842,283
Ensembl chr 3:152,398,747...152,447,088 		JBrowse link
G Ascl2 achaete-scute family bHLH transcription factor 2 acts_upstream_of_or_within ISO (PMID:31539517) RGD PMID:31539517 NCBI chr 1:207,578,447...207,665,126
Ensembl chr 1:198,148,999...198,151,406 		JBrowse link
G Bcl11a BCL11 transcription factor A acts_upstream_of_or_within ISO MGI:2663941 (PMID:12717432) RGD PMID:12717432 NCBI chr14:102,230,147...102,325,289
Ensembl chr14:98,030,461...98,124,180 		JBrowse link
G Bcl2 BCL2, apoptosis regulator acts_upstream_of_or_within ISO MGI:2156165|MGI:96562 (PMID:8170972), (PMID:9215624) RGD PMID:8170972 PMID:9215624 NCBI chr13:23,204,464...23,366,900
Ensembl chr13:22,684,989...22,853,743
Ensembl chr13:22,684,989...22,853,743 		JBrowse link
G Cacnb4 calcium voltage-gated channel auxiliary subunit beta 4 NOT|acts_upstream_of_or_within ISO MGI:1856936 (PMID:17028169) RGD PMID:17028169 NCBI chr 3:57,315,900...57,578,271
Ensembl chr 3:36,910,427...37,168,944 		JBrowse link
G Cd4 Cd4 molecule involved_in ISO
ISS		 (PMID:1533274) RGD PMID:1533274 PMID:1533274 RGD:8554683 NCBI chr 4:159,355,147...159,381,636
Ensembl chr 4:157,668,878...157,695,191 		JBrowse link
G Chd7 chromodomain helicase DNA binding protein 7 involved_in ISO (PMID:17684005) RGD PMID:17684005 NCBI chr 5:26,609,245...26,792,736
Ensembl chr 5:21,812,070...21,995,358 		JBrowse link
G Coro1a coronin 1A NAS RGD PMID:14734608 RGD:1331510 NCBI chr 1:190,726,129...190,731,133
Ensembl chr 1:181,295,562...181,300,534 		JBrowse link
G Ctnnb1 catenin beta 1 acts_upstream_of_or_within ISO MGI:2148594|MGI:2448686 (PMID:14608382) RGD PMID:14608382 NCBI chr 8:129,517,576...129,544,661
Ensembl chr 8:120,639,995...120,667,111 		JBrowse link
G Dll4 delta like canonical Notch ligand 4 involved_in IEA
ISO		 GO_REF:0000107
(PMID:15146182)		 Ensembl
RGD		 PMID:15146182 GO_REF:0000107 NCBI chr 3:106,317,114...106,327,004
Ensembl chr 3:106,316,986...106,326,931 		JBrowse link
G Dtx1 deltex E3 ubiquitin ligase 1 acts_upstream_of ISO (PMID:12794108) RGD PMID:12794108 NCBI chr12:41,510,252...41,541,433
Ensembl chr12:35,849,617...35,880,838 		JBrowse link
G Egr1 early growth response 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:2384433 (PMID:12165491)		 Ensembl
RGD		 PMID:12165491 GO_REF:0000107 NCBI chr18:26,737,078...26,740,877
Ensembl chr18:26,462,981...26,466,766 		JBrowse link
G Enpp1 ectonucleotide pyrophosphatase/phosphodiesterase 1 involved_in ISO (PMID:23169635) RGD PMID:23169635 NCBI chr 1:22,518,051...22,583,044
Ensembl chr 1:20,698,764...20,763,715 		JBrowse link
G Fosl2 FOS like 2, AP-1 transcription factor subunit acts_upstream_of_or_within ISO (PMID:32610127) RGD PMID:32610127 NCBI chr 6:30,017,952...30,039,269
Ensembl chr 6:24,300,956...24,320,034 		JBrowse link
G Gata3 GATA binding protein 3 acts_upstream_of_or_within ISO (PMID:2017177)
(PMID:7956841)		 RGD PMID:2017177 PMID:7956841 NCBI chr17:73,544,234...73,575,670
Ensembl chr17:68,643,873...68,665,391 		JBrowse link
G Gimap5 GTPase, IMAP family member 5 IEP RGD PMID:16103028 RGD:1579831 NCBI chr 4:79,025,151...79,031,917
Ensembl chr 4:77,687,564...77,703,086 		JBrowse link
G Gpr89b G protein-coupled receptor 89B involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr 2:187,096,970...187,134,391
Ensembl chr 2:184,401,438...184,445,584 		JBrowse link
G Hmga1 high mobility group AT-hook 1 acts_upstream_of_or_within ISO MGI:3697313 (PMID:15713121) RGD PMID:15713121 NCBI chr20:5,612,902...5,620,596
Ensembl chr20:5,611,694...5,618,752 		JBrowse link
G Hotairm1 Hoxa transcript antisense RNA, myeloid-specific 1 acts_upstream_of_or_within ISO (PMID:35022270) RGD PMID:35022270 NCBI chr 4:81,258,793...81,262,291 JBrowse link
G Ikzf1 IKAROS family zinc finger 1 acts_upstream_of_or_within ISO MGI:2158738 (PMID:7923373) RGD PMID:7923373 NCBI chr14:90,468,696...90,556,522
Ensembl chr14:86,255,065...86,342,416 		JBrowse link
G Ikzf3 IKAROS family zinc finger 3 involved_in ISO (PMID:34155405) RGD PMID:34155405 NCBI chr10:83,956,850...84,049,861
Ensembl chr10:83,465,745...83,553,591 		JBrowse link
G Il7r interleukin 7 receptor acts_upstream_of_or_within ISO MGI:1857198|MGI:88138 (PMID:9215624) RGD PMID:9215624 NCBI chr 2:60,179,561...60,204,937
Ensembl chr 2:58,454,217...58,477,757 		JBrowse link
G Itpkb inositol-trisphosphate 3-kinase B acts_upstream_of_or_within ISO MGI:2680720 (PMID:14517551) RGD PMID:14517551 NCBI chr13:94,601,072...94,696,180
Ensembl chr13:92,069,216...92,162,004 		JBrowse link
G Itpripl1 ITPRIP like 1 acts_upstream_of_or_within ISO (PMID:38614099) RGD PMID:38614099 NCBI chr 3:114,403,123...114,407,917
Ensembl chr 3:114,402,270...114,414,497 		JBrowse link
G Jag2 jagged canonical Notch ligand 2 involved_in ISO
ISS		 (PMID:10383933) RGD PMID:10383933 PMID:10383933 RGD:8553281 NCBI chr 6:137,804,133...137,826,738
Ensembl chr 6:131,983,056...132,005,818 		JBrowse link
G Kat7 lysine acetyltransferase 7 involved_in ISO (PMID:27733580) RGD PMID:27733580 NCBI chr10:80,718,335...80,752,387
Ensembl chr10:80,221,524...80,255,567 		JBrowse link
G Kdelr1 KDEL endoplasmic reticulum protein retention receptor 1 acts_upstream_of_or_within ISO MGI:5689886 (PMID:26438836) RGD PMID:26438836 NCBI chr 1:105,483,598...105,494,587
Ensembl chr 1:96,347,150...96,358,157 		JBrowse link
G Kit KIT proto-oncogene receptor tyrosine kinase involved_in ISO (PMID:12354381) RGD PMID:12354381 NCBI chr14:32,901,615...32,978,895
Ensembl chr14:32,548,877...32,624,652 		JBrowse link
G Lck LCK proto-oncogene, Src family tyrosine kinase involved_in ISO
IBA
IEA		 (PMID:1579166)
GO_REF:0000033
GO_REF:0000107		 RGD
GO_Central
Ensembl		 PMID:1579166 GO_REF:0000033 GO_REF:0000107 NCBI chr 5:147,172,642...147,201,267
Ensembl chr 5:141,888,326...141,903,794 		JBrowse link
G Lep leptin involved_in ISS
ISO		 GO_REF:0000024
(PMID:9732873)		 UniProt
RGD		 PMID:9732873 GO_REF:0000024 NCBI chr 4:58,626,529...58,640,663
Ensembl chr 4:57,661,131...57,675,262 		JBrowse link
G Lepr leptin receptor involved_in ISS
ISO
IEA		 GO_REF:0000024
(PMID:9732873)
GO_REF:0000107		 UniProt
RGD
Ensembl		 PMID:9732873 GO_REF:0000024 GO_REF:0000107 NCBI chr 5:121,409,735...121,593,201
Ensembl chr 5:116,289,823...116,475,908 		JBrowse link
G Lfng LFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase involved_in ISS
ISO
IEA		 GO_REF:0000024
(PMID:19217325)
GO_REF:0000107		 UniProt
RGD
Ensembl		 PMID:19217325 GO_REF:0000024 GO_REF:0000107 NCBI chr12:19,144,474...19,152,951
Ensembl chr12:14,018,333...14,039,008 		JBrowse link
G Lipa lipase A, lysosomal acid type involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:2451080 (PMID:19179613)		 Ensembl
RGD		 PMID:19179613 GO_REF:0000107 NCBI chr 1:241,437,524...241,470,936
Ensembl chr 1:232,024,356...232,057,633 		JBrowse link
G Lmbr1l limb development membrane protein 1-like involved_in ISO (PMID:31073040) RGD PMID:31073040 NCBI chr 7:131,940,081...131,958,832
Ensembl chr 7:130,061,136...130,076,381 		JBrowse link
G Muc19 mucin 19, oligomeric acts_upstream_of_or_within ISO (PMID:31539517) RGD PMID:31539517 NCBI chr 7:124,897,424...125,018,582
Ensembl chr 7:123,017,896...123,139,053 		JBrowse link
G Nfatc3 nuclear factor of activated T-cells 3 acts_upstream_of_or_within ISO MGI:2182778 (PMID:9768749) RGD PMID:9768749 NCBI chr19:50,870,464...50,944,992
Ensembl chr19:33,960,852...34,035,150 		JBrowse link
G Nfkbiz NFKB inhibitor zeta involved_in ISO MGI:3046930|MGI:5501251 (PMID:26019294), (PMID:31182790) RGD PMID:26019294 PMID:31182790 NCBI chr11:58,251,720...58,279,767
Ensembl chr11:44,782,676...44,810,723 		JBrowse link
G Nhej1 nonhomologous end-joining factor 1 involved_in ISO
IEA
ISS		 (PMID:16439204)
GO_REF:0000107
GO_REF:0000024		 RGD
Ensembl
UniProt		 PMID:16439204 GO_REF:0000024 GO_REF:0000107 NCBI chr 9:83,974,995...84,071,161
Ensembl chr 9:76,526,324...76,622,444 		JBrowse link
G Nrarp Notch-regulated ankyrin repeat protein acts_upstream_of ISO (PMID:12794108) RGD PMID:12794108 NCBI chr 3:28,390,745...28,393,299
Ensembl chr 3:7,992,552...7,995,133 		JBrowse link
G Patz1 POZ (BTB) and AT hook containing zinc finger 1 acts_upstream_of_or_within ISO (PMID:16491076) RGD PMID:16491076 NCBI chr14:82,378,226...82,396,679
Ensembl chr14:78,152,516...78,173,032 		JBrowse link
G Pknox1 PBX/knotted 1 homeobox 1 acts_upstream_of_or_within ISO MGI:3530910 (PMID:16314502) RGD PMID:16314502 NCBI chr20:9,664,120...9,706,328
Ensembl chr20:9,662,899...9,703,727 		JBrowse link
G Ppp3cb protein phosphatase 3 catalytic subunit beta involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:2181294 (PMID:12091710)		 Ensembl
RGD		 PMID:12091710 GO_REF:0000107 NCBI chr15:3,809,182...3,854,204
Ensembl chr15:3,760,030...3,804,981 		JBrowse link
G Prex1 phosphatidylinositol-3,4,5-trisphosphate-dependent Rac exchange factor 1 acts_upstream_of_or_within ISO MGI:98923 (PMID:21178006) RGD PMID:21178006 NCBI chr 3:175,724,939...175,875,764
Ensembl chr 3:155,306,950...155,456,688 		JBrowse link
G Ptpn2 protein tyrosine phosphatase, non-receptor type 2 involved_in ISS
ISO
IEA		 GO_REF:0000024
(PMID:9271584)
GO_REF:0000107		 UniProt
RGD
Ensembl		 PMID:9271584 GO_REF:0000024 GO_REF:0000107 NCBI chr18:63,498,890...63,564,571
Ensembl chr18:61,229,014...61,294,627 		JBrowse link
G Ptpn22 protein tyrosine phosphatase, non-receptor type 22 acts_upstream_of_or_within ISO MGI:3043469 (PMID:14752163) RGD PMID:14752163 NCBI chr 2:194,055,165...194,103,209
Ensembl chr 2:191,366,808...191,414,779 		JBrowse link
G Ptprc protein tyrosine phosphatase, receptor type, C involved_in ISS
ISO		 GO_REF:0000024
(PMID:15557316), (PMID:8334701)		 UniProt
RGD		 PMID:8334701 PMID:15557316 GO_REF:0000024 NCBI chr13:52,147,717...52,259,810
Ensembl chr13:49,596,193...49,708,692 		JBrowse link
G Ptprk protein tyrosine phosphatase, receptor type, K IEP RGD PMID:17434290 RGD:15036800 NCBI chr 1:18,557,091...19,056,297
Ensembl chr 1:16,850,576...17,103,605 		JBrowse link
G Rag2 recombination activating 2 acts_upstream_of_or_within ISO MGI:1858556 (PMID:11980719), (PMID:14595002) RGD PMID:11980719 PMID:14595002 NCBI chr 3:108,357,399...108,367,186
Ensembl chr 3:87,902,238...87,911,066 		JBrowse link
G Rhoh ras homolog family member H involved_in ISO (PMID:17028588), (PMID:17119112) RGD PMID:17028588 PMID:17119112 NCBI chr14:42,694,860...42,725,690
Ensembl chr14:42,337,751...42,386,369 		JBrowse link
G Runx2 RUNX family transcription factor 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
(PMID:7862157)		 Ensembl
RGD		 PMID:7862157 GO_REF:0000107 NCBI chr 9:23,661,278...23,990,248
Ensembl chr 9:16,167,482...16,492,167 		JBrowse link
G Sox4 SRY-box transcription factor 4 involved_in ISO (PMID:9174623) RGD PMID:9174623 NCBI chr17:35,876,298...35,881,004
Ensembl chr17:35,667,537...35,673,665 		JBrowse link
G Sp3 Sp3 transcription factor acts_upstream_of_or_within ISO MGI:2182438 (PMID:12676787) RGD PMID:12676787 NCBI chr 3:78,219,421...78,272,318
Ensembl chr 3:57,812,075...57,860,342 		JBrowse link
G Sstr1 somatostatin receptor 1 NAS RGD PMID:8932524 RGD:737834 NCBI chr 6:81,567,237...81,571,759
Ensembl chr 6:75,832,530...75,836,802 		JBrowse link
G Tbx21 T-box transcription factor 21 acts_upstream_of_or_within ISO MGI:2180194 (PMID:20399120) RGD PMID:20399120 NCBI chr10:82,578,751...82,595,253
Ensembl chr10:82,082,322...82,098,831 		JBrowse link
G Tcirg1 T-cell immune regulator 1, ATPase H+ transporting V0 subunit A3 acts_upstream_of_or_within ISO MGI:3054898 (PMID:15294947) RGD PMID:15294947 NCBI chr 1:210,556,270...210,568,021
Ensembl chr 1:201,127,034...201,138,742 		JBrowse link
G Tgfb1 transforming growth factor, beta 1 acts_upstream_of_or_within ISO MGI:3719583 (PMID:17481928) RGD PMID:17481928 NCBI chr 1:90,324,312...90,340,627
Ensembl chr 1:81,196,532...81,212,847 		JBrowse link
G Traf3ip2 Traf3 interacting protein 2 involved_in ISO MGI:3510784 (PMID:22585710) RGD PMID:22585710 NCBI chr20:44,565,992...44,609,240
Ensembl chr20:43,011,450...43,054,667 		JBrowse link
G Vav1 vav guanine nucleotide exchange factor 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:3040696 (PMID:21178006)		 Ensembl
RGD		 PMID:21178006 GO_REF:0000107 NCBI chr 9:2,248,856...2,295,905
Ensembl chr 9:2,157,900...2,208,937 		JBrowse link
G Wnt10b Wnt family member 10B acts_upstream_of ISO (PMID:19723499) RGD PMID:19723499 NCBI chr 7:131,801,046...131,806,850
Ensembl chr 7:129,922,088...129,927,892 		JBrowse link
G Zap70 zeta chain of T cell receptor associated protein kinase 70 acts_upstream_of ISO MGI:2677447|MGI:3526403 (PMID:9208839) RGD PMID:9208839 NCBI chr 9:46,485,605...46,507,552
Ensembl chr 9:38,989,750...39,011,700 		JBrowse link
T cell differentiation in thymus term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ada adenosine deaminase involved_in
acts_upstream_of		 IEA
ISO		 GO_REF:0000107
MGI:1857117|MGI:2683027 (PMID:11067867), (PMID:11435465), (PMID:12163459), (PMID:16670300)		 Ensembl
RGD		 PMID:11067867 PMID:11435465 PMID:12163459 PMID:16670300 GO_REF:0000107 NCBI chr 3:172,818,174...172,842,283
Ensembl chr 3:152,398,747...152,447,088 		JBrowse link
G Adam17 ADAM metallopeptidase domain 17 involved_in ISO (PMID:17371977) RGD PMID:17371977 NCBI chr 6:46,601,583...46,663,690
Ensembl chr 6:40,872,856...40,920,639 		JBrowse link
G Apc APC regulator of WNT signaling pathway acts_upstream_of_or_within ISO MGI:3589207 (PMID:16025118) RGD PMID:16025118 NCBI chr18:26,138,382...26,196,021
Ensembl chr18:25,864,222...25,922,696 		JBrowse link
G B2m beta-2 microglobulin acts_upstream_of_or_within ISO MGI:95663 (PMID:18776904) RGD PMID:18776904 NCBI chr 3:129,549,236...129,555,354
Ensembl chr 3:109,095,729...109,101,766 		JBrowse link
G Bcl11b BCL11 transcription factor B acts_upstream_of_or_within ISO MGI:2663971 (PMID:16670294) RGD PMID:16670294 NCBI chr 6:132,598,968...132,692,123
Ensembl chr 6:126,834,531...126,928,224 		JBrowse link
G Bcl2 BCL2, apoptosis regulator involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:2156165 (PMID:8170972), (PMID:9028316)		 Ensembl
RGD		 PMID:8170972 PMID:9028316 GO_REF:0000107 NCBI chr13:23,204,464...23,366,900
Ensembl chr13:22,684,989...22,853,743
Ensembl chr13:22,684,989...22,853,743 		JBrowse link
G Braf B-Raf proto-oncogene, serine/threonine kinase acts_upstream_of_or_within ISO MGI:3711006 (PMID:23334952) RGD PMID:23334952 NCBI chr 4:69,329,772...69,476,931
Ensembl chr 4:68,384,649...68,510,463 		JBrowse link
G Cd3e CD3 epsilon subunit of T-cell receptor complex IEP RGD PMID:11896936 RGD:2313407 NCBI chr 8:54,200,617...54,211,770
Ensembl chr 8:45,303,852...45,315,022 		JBrowse link
G Cdk6 cyclin-dependent kinase 6 acts_upstream_of_or_within ISO MGI:3833563|MGI:5141514 (PMID:21508411) RGD PMID:21508411 NCBI chr 4:31,592,384...31,784,732
Ensembl chr 4:30,646,460...30,829,634 		JBrowse link
G Ctnnb1 catenin beta 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:1858008 (PMID:16025118)		 Ensembl
RGD		 PMID:16025118 GO_REF:0000107 NCBI chr 8:129,517,576...129,544,661
Ensembl chr 8:120,639,995...120,667,111 		JBrowse link
G Dnaja3 DnaJ heat shock protein family (Hsp40) member A3 acts_upstream_of_or_within ISO MGI:2448686|MGI:3040717 (PMID:15879105) RGD PMID:15879105 NCBI chr10:11,361,168...11,386,599
Ensembl chr10:10,854,732...10,880,161 		JBrowse link
G Fadd Fas associated via death domain involved_in ISS
ISO		 GO_REF:0000024
(PMID:21876153)		 UniProt
RGD		 PMID:21876153 GO_REF:0000024 NCBI chr 1:209,169,245...209,175,423
Ensembl chr 1:199,739,994...199,745,653 		JBrowse link
G Fzd5 frizzled class receptor 5 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
(PMID:11265645)		 Ensembl
RGD		 PMID:11265645 GO_REF:0000107 NCBI chr 9:73,606,860...73,614,039
Ensembl chr 9:66,113,112...66,121,457 		JBrowse link
G Fzd7 frizzled class receptor 7 acts_upstream_of_or_within ISO (PMID:11265645) RGD PMID:11265645 NCBI chr 9:68,425,538...68,428,357
Ensembl chr 9:60,930,875...60,935,781 		JBrowse link
G Fzd8 frizzled class receptor 8 acts_upstream_of_or_within ISO (PMID:11265645) RGD PMID:11265645 NCBI chr17:62,007,849...62,015,485
Ensembl chr17:57,314,450...57,320,650 		JBrowse link
G Gata3 GATA binding protein 3 acts_upstream_of_or_within ISO MGI:2153825|MGI:2683927|MGI:4418042|MGI:88127 (PMID:14670303), (PMID:18776904), (PMID:19934022), (PMID:8945476) RGD PMID:8945476 PMID:14670303 PMID:18776904 PMID:19934022 NCBI chr17:73,544,234...73,575,670
Ensembl chr17:68,643,873...68,665,391 		JBrowse link
G Gba1 glucosylceramidase beta 1 acts_upstream_of_or_within ISO (PMID:22665763) RGD PMID:22665763 NCBI chr 2:176,902,141...176,916,015
Ensembl chr 2:174,609,403...174,618,263 		JBrowse link
G Gli3 GLI family zinc finger 3 acts_upstream_of_or_within
involved_in		 ISO MGI:1856276 (PMID:15855276) RGD PMID:15855276 NCBI chr17:54,134,064...54,405,198
Ensembl chr17:49,438,567...49,709,712 		JBrowse link
G Il2rg interleukin 2 receptor subunit gamma acts_upstream_of ISO MGI:1857455|MGI:2429736 (PMID:9252128), (PMID:9916699) RGD PMID:9252128 PMID:9916699 NCBI chr  X:66,395,330...66,399,026
Ensembl chr  X:66,392,542...66,399,823 		JBrowse link
G Il7r interleukin 7 receptor acts_upstream_of ISO MGI:1857198 (PMID:9215626) RGD PMID:9215626 NCBI chr 2:60,179,561...60,204,937
Ensembl chr 2:58,454,217...58,477,757 		JBrowse link
G Jmjd6 jumonji domain containing 6, arginine demethylase and lysine hydroxylase involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:3043930 (PMID:14715629)		 Ensembl
RGD		 PMID:14715629 GO_REF:0000107 NCBI chr10:102,539,935...102,545,986
Ensembl chr10:102,041,120...102,047,182 		JBrowse link
G Mafb MAF bZIP transcription factor B acts_upstream_of_or_within ISO MGI:3663168 (PMID:19164599) RGD PMID:19164599 NCBI chr 3:169,417,890...169,419,810
Ensembl chr 3:148,998,122...149,000,031 		JBrowse link
G Mpzl2 myelin protein zero-like 2 acts_upstream_of_or_within ISO (PMID:19851463) RGD PMID:19851463 NCBI chr 8:54,244,920...54,256,064
Ensembl chr 8:45,348,285...45,359,298 		JBrowse link
G Mr1 major histocompatibility complex, class I-related involved_in IEA
ISO		 GO_REF:0000107
(PMID:12634786)		 Ensembl
RGD		 PMID:12634786 GO_REF:0000107 NCBI chr13:69,850,420...69,868,302
Ensembl chr13:67,299,585...67,317,970 		JBrowse link
G Ncaph2 non-SMC condensin II complex, subunit H2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:3710093 (PMID:17640884)		 Ensembl
RGD		 PMID:17640884 GO_REF:0000107 NCBI chr 7:120,422,926...120,439,942
Ensembl chr 7:120,422,956...120,439,938 		JBrowse link
G Ncor1 nuclear receptor co-repressor 1 acts_upstream_of_or_within ISO MGI:2677822 (PMID:11030619) RGD PMID:11030619 NCBI chr10:47,498,852...47,641,612
Ensembl chr10:46,999,536...47,141,032 		JBrowse link
G Nfkbid NFKB inhibitor delta acts_upstream_of ISO (PMID:11931770) RGD PMID:11931770 NCBI chr 1:85,679,353...85,690,415
Ensembl chr 1:85,680,861...85,690,447 		JBrowse link
G Nkap NFKB activating protein involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:3765313|MGI:4839023 (PMID:20610818)		 Ensembl
RGD		 PMID:20610818 GO_REF:0000107 NCBI chr  X:116,373,031...116,392,677
Ensembl chr  X:116,372,839...116,394,945 		JBrowse link
G Prkdc protein kinase, DNA-activated, catalytic subunit acts_upstream_of_or_within ISO MGI:2383951 (PMID:9768755) RGD PMID:9768755 NCBI chr11:98,544,952...98,762,499
Ensembl chr11:85,040,792...85,257,952 		JBrowse link
G Prr7 proline rich 7 (synaptic) involved_in ISO MGI:4399196 (PMID:27657535) RGD PMID:27657535 NCBI chr17:9,170,405...9,178,814
Ensembl chr17:9,165,269...9,172,536 		JBrowse link
G Psmb11 proteasome subunit beta 11 acts_upstream_of_or_within ISO (PMID:31915251) RGD PMID:31915251 NCBI chr15:32,054,747...32,055,666 JBrowse link
G Rabl3 RAB, member of RAS oncogene family-like 3 involved_in ISO (PMID:32220963) RGD PMID:32220963 NCBI chr11:63,153,281...63,182,240
Ensembl chr11:63,152,792...63,182,671 		JBrowse link
G Rag1 recombination activating 1 acts_upstream_of_or_within
involved_in		 ISO MGI:2448994 (PMID:9215624)
(PMID:1547488)		 RGD PMID:1547488 PMID:9215624 NCBI chr 3:108,372,087...108,383,184
Ensembl chr 3:87,917,004...87,928,291 		JBrowse link
G Rag2 recombination activating 2 involved_in ISO (PMID:1547488) RGD PMID:1547488 NCBI chr 3:108,357,399...108,367,186
Ensembl chr 3:87,902,238...87,911,066 		JBrowse link
G Ripk3 receptor-interacting serine-threonine kinase 3 involved_in ISS
ISO		 GO_REF:0000024
UniProtKB:Q61160 (PMID:21876153)		 UniProt
RGD		 PMID:21876153 GO_REF:0000024 NCBI chr15:33,253,071...33,262,025
Ensembl chr15:29,283,145...29,292,121 		JBrowse link
G Rorc RAR-related orphan receptor C acts_upstream_of_or_within ISO MGI:3026635 (PMID:15247480) RGD PMID:15247480 NCBI chr 2:184,698,779...184,723,942
Ensembl chr 2:182,009,286...182,034,907 		JBrowse link
G Rps6 ribosomal protein S6 acts_upstream_of_or_within ISO MGI:2387471|MGI:98834 (PMID:16357222) RGD PMID:16357222 NCBI chr 5:106,417,680...106,420,540
Ensembl chr 5:101,371,136...101,374,602
Ensembl chr 5:101,371,136...101,374,602 		JBrowse link
G Shh sonic hedgehog signaling molecule involved_in
acts_upstream_of		 ISS
ISO		 GO_REF:0000024
(PMID:19273836)
(PMID:10981962)		 UniProt
RGD		 PMID:10981962 PMID:19273836 GO_REF:0000024 NCBI chr 4:7,687,872...7,697,025
Ensembl chr 4:6,954,017...6,963,170 		JBrowse link
G Stat5a signal transducer and activator of transcription 5A acts_upstream_of_or_within ISO MGI:103035 (PMID:15294943) RGD PMID:15294943 NCBI chr10:86,285,859...86,310,187
Ensembl chr10:85,785,537...85,809,866 		JBrowse link
G Stat5b signal transducer and activator of transcription 5B involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:103036 (PMID:15294943)		 Ensembl
RGD		 PMID:15294943 GO_REF:0000107 NCBI chr10:86,205,148...86,276,178
Ensembl chr10:85,705,670...85,775,668 		JBrowse link
G Tcf3 transcription factor 3 acts_upstream_of_or_within ISO MGI:2178112 (PMID:18958875) RGD PMID:18958875 NCBI chr 7:9,931,251...9,952,994
Ensembl chr 7:9,280,571...9,302,314 		JBrowse link
G Tp53 tumor protein p53 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:98159 (PMID:16357222)		 Ensembl
RGD		 PMID:16357222 GO_REF:0000107 NCBI chr10:54,798,871...54,810,300
Ensembl chr10:54,300,048...54,311,524 		JBrowse link
G Wnt1 Wnt family member 1 acts_upstream_of_or_within ISO (PMID:11265645) RGD PMID:11265645 NCBI chr 7:131,817,558...131,821,605
Ensembl chr 7:129,938,604...129,942,651 		JBrowse link
G Wnt4 Wnt family member 4 acts_upstream_of_or_within ISO (PMID:11265645) RGD PMID:11265645 NCBI chr 5:154,797,245...154,818,565
Ensembl chr 5:149,514,018...149,532,859 		JBrowse link
G Zbtb1 zinc finger and BTB domain containing 1 acts_upstream_of_or_within ISO MGI:5300200 (PMID:22201126) RGD PMID:22201126 NCBI chr 6:100,832,506...100,864,019
Ensembl chr 6:95,096,387...95,118,996 		JBrowse link
G Zfp36l1 zinc finger protein 36, C3H type-like 1 involved_in ISS
ISO		 GO_REF:0000024
UniProtKB:P23949 (PMID:20622884)		 UniProt
RGD		 PMID:20622884 GO_REF:0000024 NCBI chr 6:104,663,396...104,669,815
Ensembl chr 6:98,930,718...98,935,748 		JBrowse link
G Zfp36l2 zinc finger protein 36, C3H type-like 2 involved_in ISO UniProtKB:P23950 (PMID:20622884) RGD PMID:20622884 NCBI chr 6:16,242,622...16,246,662
Ensembl chr 6:10,490,032...10,494,064 		JBrowse link
T cell differentiation involved in immune response term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Clec4d C-type lectin domain family 4, member D involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
(PMID:23602766)		 Ensembl
RGD		 PMID:23602766 GO_REF:0000107 NCBI chr 4:158,275,287...158,286,978
Ensembl chr 4:156,589,792...156,598,848 		JBrowse link
G Clec4e C-type lectin domain family 4, member E involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:5013826 (PMID:23602766)		 Ensembl
RGD		 PMID:23602766 GO_REF:0000107 NCBI chr 4:158,292,624...158,298,607
Ensembl chr 4:156,607,614...156,612,767 		JBrowse link
G Fcer1g Fc epsilon receptor Ig involved_in
acts_upstream_of_or_within		 IBA
ISO		 GO_REF:0000033
MGI:2384004 (PMID:23602766)		 GO_Central
RGD		 PMID:23602766 GO_REF:0000033 NCBI chr13:86,181,908...86,186,766
Ensembl chr13:83,649,449...83,671,443 		JBrowse link
G Sema4a semaphorin 4A involved_in ISO (PMID:15780988) RGD PMID:15780988 NCBI chr 2:176,194,248...176,215,752
Ensembl chr 2:173,896,439...173,914,442 		JBrowse link
T cell lineage commitment term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bcl2 BCL2, apoptosis regulator acts_upstream_of_or_within ISO MGI:2156165 (PMID:8788039) RGD PMID:8788039 NCBI chr13:23,204,464...23,366,900
Ensembl chr13:22,684,989...22,853,743
Ensembl chr13:22,684,989...22,853,743 		JBrowse link
G Foxn1 forkhead box N1 involved_in ISO (PMID:24184560) RGD PMID:24184560 NCBI chr10:63,749,461...63,778,468
Ensembl chr10:63,251,400...63,273,710 		JBrowse link
G Il7 interleukin 7 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:1857652 (PMID:9252127)		 Ensembl
RGD		 PMID:9252127 GO_REF:0000107 NCBI chr 2:96,142,523...96,186,282
Ensembl chr 2:94,234,766...94,280,075 		JBrowse link
G Prkdc protein kinase, DNA-activated, catalytic subunit acts_upstream_of_or_within ISO MGI:1857113 (PMID:8788039) RGD PMID:8788039 NCBI chr11:98,544,952...98,762,499
Ensembl chr11:85,040,792...85,257,952 		JBrowse link
G Rag2 recombination activating 2 acts_upstream_of_or_within ISO MGI:1858556 (PMID:8788039) RGD PMID:8788039 NCBI chr 3:108,357,399...108,367,186
Ensembl chr 3:87,902,238...87,911,066 		JBrowse link
G Tp53 tumor protein p53 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:1857590 (PMID:8788039)		 Ensembl
RGD		 PMID:8788039 GO_REF:0000107 NCBI chr10:54,798,871...54,810,300
Ensembl chr10:54,300,048...54,311,524 		JBrowse link
T cell receptor V(D)J recombination term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bcl11b BCL11 transcription factor B acts_upstream_of_or_within ISO MGI:2663971 (PMID:12717433) RGD PMID:12717433 NCBI chr 6:132,598,968...132,692,123
Ensembl chr 6:126,834,531...126,928,224 		JBrowse link
G Lef1 lymphoid enhancer binding factor 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:98507 (PMID:9462507)		 Ensembl
RGD		 PMID:9462507 GO_REF:0000107 NCBI chr 2:222,340,541...222,453,931
Ensembl chr 2:219,666,592...219,779,794 		JBrowse link
G Lig4 DNA ligase 4 acts_upstream_of_or_within ISO MGI:1857732 (PMID:10911993) RGD PMID:10911993 NCBI chr16:86,220,345...86,228,930
Ensembl chr16:79,518,312...79,527,040 		JBrowse link
G Prkdc protein kinase, DNA-activated, catalytic subunit acts_upstream_of_or_within ISO MGI:2383951 (PMID:9768755) RGD PMID:9768755 NCBI chr11:98,544,952...98,762,499
Ensembl chr11:85,040,792...85,257,952 		JBrowse link
G Tcf7 transcription factor 7 acts_upstream_of_or_within ISO MGI:96770 (PMID:9462507) RGD PMID:9462507 NCBI chr10:36,924,363...36,954,279
Ensembl chr10:36,423,445...36,453,535 		JBrowse link
T cell selection term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cd4 Cd4 molecule involved_in ISO
IEA
ISS		 (PMID:9551897)
GO_REF:0000107		 RGD
Ensembl		 PMID:9551897 PMID:9551897 GO_REF:0000107, RGD:8554348 NCBI chr 4:159,355,147...159,381,636
Ensembl chr 4:157,668,878...157,695,191 		JBrowse link
T follicular helper cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ascl2 achaete-scute family bHLH transcription factor 2 involved_in ISO (PMID:24463518) RGD PMID:24463518 NCBI chr 1:207,578,447...207,665,126
Ensembl chr 1:198,148,999...198,151,406 		JBrowse link
G Foxp1 forkhead box P1 involved_in ISO (PMID:24859450) RGD PMID:24859450 NCBI chr 4:133,117,346...133,808,647
Ensembl chr 4:131,564,756...132,112,258 		JBrowse link
G Gpr183 G protein-coupled receptor 183 involved_in ISS
ISO		 GO_REF:0000024
(PMID:27147029)		 UniProt
RGD		 PMID:27147029 GO_REF:0000024 NCBI chr15:105,445,129...105,457,192
Ensembl chr15:99,036,367...99,050,559 		JBrowse link
G Icos inducible T-cell co-stimulator involved_in ISO
IEA		 (PMID:27135603)
GO_REF:0000107		 RGD
Ensembl		 PMID:27135603 GO_REF:0000107 NCBI chr 9:62,368,075...62,406,900
Ensembl chr 9:62,383,832...62,405,672 		JBrowse link
G Icoslg inducible T-cell co-stimulator ligand involved_in ISO (PMID:24411167) RGD PMID:24411167 NCBI chr20:10,600,078...10,610,385
Ensembl chr20:10,600,420...10,610,703 		JBrowse link
G Il21 interleukin 21 involved_in ISS
ISO		 GO_REF:0000024
(PMID:23045607)		 UniProt
RGD		 PMID:23045607 GO_REF:0000024 NCBI chr 2:122,045,240...122,055,142
Ensembl chr 2:120,119,444...120,126,996 		JBrowse link
G Il6 interleukin 6 involved_in ISS
ISO		 GO_REF:0000024
(PMID:23045607)		 UniProt
RGD		 PMID:23045607 GO_REF:0000024 NCBI chr 4:5,889,999...5,894,575
Ensembl chr 4:5,213,394...5,219,178 		JBrowse link
G Pik3r1 phosphoinositide-3-kinase regulatory subunit 1 involved_in ISO
IEA		 (PMID:30523347)
GO_REF:0000107		 RGD
Ensembl		 PMID:30523347 GO_REF:0000107 NCBI chr 2:34,612,946...34,697,660
Ensembl chr 2:32,882,032...32,963,631 		JBrowse link
G Rc3h1 ring finger and CCCH-type domains 1 acts_upstream_of_or_within ISO MGI:2442789 (PMID:23583643) RGD PMID:23583643 NCBI chr13:73,174,075...73,245,762
Ensembl chr13:73,173,946...73,238,839 		JBrowse link
G Rc3h2 ring finger and CCCH-type domains 2 acts_upstream_of_or_within ISO MGI:2685397 (PMID:23583643) RGD PMID:23583643 NCBI chr 3:41,531,319...41,596,496
Ensembl chr 3:21,110,679...21,179,933 		JBrowse link
G Tbk1 TANK-binding kinase 1 involved_in ISO (PMID:27135603) RGD PMID:27135603 NCBI chr 7:58,963,319...58,996,357
Ensembl chr 7:57,077,830...57,110,892 		JBrowse link
T-helper 1 cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cracr2a calcium release activated channel regulator 2A involved_in ISO (PMID:29987160) RGD PMID:29987160 NCBI chr 4:160,428,987...160,517,427
Ensembl chr 4:160,408,077...160,518,107 		JBrowse link
G Hlx H2.0-like homeobox acts_upstream_of ISO MGI:105367|MGI:2182089 (PMID:16424184) RGD PMID:16424184 NCBI chr13:98,811,852...98,817,264
Ensembl chr13:96,280,339...96,285,750 		JBrowse link
G Hmgb1 high mobility group box 1 involved_in ISO (PMID:15944249) RGD PMID:15944249 NCBI chr12:11,009,236...11,015,941
Ensembl chr12:5,901,586...5,978,565
Ensembl chr16:5,901,586...5,978,565 		JBrowse link
G Il18r1 interleukin 18 receptor 1 acts_upstream_of_or_within ISO MGI:2136765 (PMID:10227969) RGD PMID:10227969 NCBI chr 9:50,223,274...50,257,370
Ensembl chr 9:42,727,869...42,760,715 		JBrowse link
G Il4r interleukin 4 receptor acts_upstream_of ISO MGI:96109 (PMID:16424184) RGD PMID:16424184 NCBI chr 1:189,545,739...189,570,639
Ensembl chr 1:180,115,120...180,139,980 		JBrowse link
G Lef1 lymphoid enhancer binding factor 1 involved_in IEA
ISO		 GO_REF:0000107
(PMID:18579517)		 Ensembl
RGD		 PMID:18579517 GO_REF:0000107 NCBI chr 2:222,340,541...222,453,931
Ensembl chr 2:219,666,592...219,779,794 		JBrowse link
G Nfkbiz NFKB inhibitor zeta involved_in ISO MGI:3046930 (PMID:31182790) RGD PMID:31182790 NCBI chr11:58,251,720...58,279,767
Ensembl chr11:44,782,676...44,810,723 		JBrowse link
G Relb RELB proto-oncogene, NF-kB subunit acts_upstream_of_or_within ISO MGI:2179545 (PMID:16081776) RGD PMID:16081776 NCBI chr 1:88,385,717...88,413,380
Ensembl chr 1:79,257,725...79,285,507 		JBrowse link
G Sema4a semaphorin 4A involved_in ISO (PMID:15780988) RGD PMID:15780988 NCBI chr 2:176,194,248...176,215,752
Ensembl chr 2:173,896,439...173,914,442 		JBrowse link
G Stat4 signal transducer and activator of transcription 4 involved_in ISO (PMID:14688310) RGD PMID:14688310 NCBI chr 9:56,964,617...57,080,523
Ensembl chr 9:49,419,340...49,588,540 		JBrowse link
G Tmem98 transmembrane protein 98 involved_in ISS
ISO
IEA		 GO_REF:0000024
(PMID:25946230)
GO_REF:0000107		 UniProt
RGD
Ensembl		 PMID:25946230 GO_REF:0000024 GO_REF:0000107 NCBI chr10:66,293,895...66,304,806
Ensembl chr10:65,796,145...65,807,079 		JBrowse link
T-helper 1 cell lineage commitment term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Il4 interleukin 4 acts_upstream_of_or_within ISO MGI:103034 (PMID:20706986) RGD PMID:20706986 NCBI chr10:38,272,003...38,277,549
Ensembl chr10:37,771,203...37,776,750 		JBrowse link
G Mtor mechanistic target of rapamycin kinase involved_in IEA
ISO		 GO_REF:0000107
(PMID:26410627)		 Ensembl
RGD		 PMID:26410627 GO_REF:0000107 NCBI chr 5:164,167,985...164,277,438
Ensembl chr 5:158,884,804...158,994,311 		JBrowse link
G Spn sialophorin involved_in ISO
ISS		 (PMID:18036228)
GO_REF:0000024		 RGD
UniProt		 PMID:18036228 GO_REF:0000024 NCBI chr 1:191,177,449...191,190,115
Ensembl chr 1:181,746,429...181,759,628 		JBrowse link
G Stat6 signal transducer and activator of transcription 6 acts_upstream_of_or_within ISO MGI:96556 (PMID:20706986) RGD PMID:20706986 NCBI chr 7:65,365,505...65,382,825
Ensembl chr 7:63,479,642...63,498,495 		JBrowse link
G Tbx21 T-box transcription factor 21 involved_in ISO (PMID:10761931) RGD PMID:10761931 NCBI chr10:82,578,751...82,595,253
Ensembl chr10:82,082,322...82,098,831 		JBrowse link
T-helper 17 cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Batf basic leucine zipper ATF-like transcription factor involved_in ISS
ISO		 GO_REF:0000024
(PMID:20421391), (PMID:21572431)		 UniProt
RGD		 PMID:20421391 PMID:21572431 GO_REF:0000024 NCBI chr 6:111,084,717...111,107,052
Ensembl chr 6:105,353,715...105,376,051 		JBrowse link
G Entpd7 ectonucleoside triphosphate diphosphohydrolase 7 involved_in ISO (PMID:23241884) RGD PMID:23241884 NCBI chr 1:242,559,365...242,601,044
Ensembl chr 1:242,559,365...242,601,447 		JBrowse link
G Nfkbiz NFKB inhibitor zeta involved_in ISO MGI:3046930 (PMID:20383124) RGD PMID:20383124 NCBI chr11:58,251,720...58,279,767
Ensembl chr11:44,782,676...44,810,723 		JBrowse link
G Rora RAR-related orphan receptor A involved_in ISO (PMID:18164222) RGD PMID:18164222 NCBI chr 8:78,182,710...78,915,730
Ensembl chr 8:69,301,733...70,025,931 		JBrowse link
G Rorc RAR-related orphan receptor C acts_upstream_of_or_within
involved_in		 ISO (PMID:18792410)
(PMID:16990136), (PMID:18164222)
MGI:2386114 (PMID:20383124)		 RGD PMID:16990136 PMID:18164222 PMID:18792410 PMID:20383124 NCBI chr 2:184,698,779...184,723,942
Ensembl chr 2:182,009,286...182,034,907 		JBrowse link
T-helper 17 cell lineage commitment term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Batf basic leucine zipper ATF-like transcription factor involved_in ISS
ISO		 GO_REF:0000024
(PMID:19578362), (PMID:22983707)		 UniProt
RGD		 PMID:19578362 PMID:22983707 GO_REF:0000024 NCBI chr 6:111,084,717...111,107,052
Ensembl chr 6:105,353,715...105,376,051 		JBrowse link
G Il6 interleukin 6 involved_in ISS
ISO		 GO_REF:0000024
(PMID:16990136), (PMID:27893700)		 UniProt
RGD		 PMID:16990136 PMID:27893700 GO_REF:0000024 NCBI chr 4:5,889,999...5,894,575
Ensembl chr 4:5,213,394...5,219,178 		JBrowse link
G Il6r interleukin 6 receptor involved_in ISS
ISO
IEA		 GO_REF:0000024
(PMID:27893700)
GO_REF:0000107		 UniProt
RGD
Ensembl		 PMID:27893700 GO_REF:0000024 GO_REF:0000107 NCBI chr 2:177,582,020...177,646,705
Ensembl chr 2:175,298,686...175,347,536 		JBrowse link
G Irf4 interferon regulatory factor 4 involved_in ISO (PMID:22983707) RGD PMID:22983707 NCBI chr17:33,930,460...33,948,842
Ensembl chr17:33,721,811...33,740,070 		JBrowse link
G Ly9 lymphocyte antigen 9 involved_in ISO (PMID:22184727) RGD PMID:22184727 NCBI chr13:86,610,762...86,633,314
Ensembl chr13:84,079,458...84,100,823 		JBrowse link
G Otud5 OTU deubiquitinase 5 acts_upstream_of_or_within ISO MGI:2386448|MGI:5752247 (PMID:25470037) RGD PMID:25470037 NCBI chr  X:17,296,750...17,331,257
Ensembl chr  X:14,626,164...14,659,573 		JBrowse link
G Slamf6 SLAM family member 6 involved_in ISO (PMID:22184727) RGD PMID:22184727 NCBI chr13:86,916,956...86,937,697
Ensembl chr13:84,383,742...84,405,300 		JBrowse link
G Stat3 signal transducer and activator of transcription 3 involved_in ISS
ISO
IEA		 GO_REF:0000024
(PMID:28065600)
GO_REF:0000107		 UniProt
RGD
Ensembl		 PMID:28065600 GO_REF:0000024 GO_REF:0000107 NCBI chr10:86,311,528...86,363,513
Ensembl chr10:85,811,218...85,863,057 		JBrowse link
T-helper 2 cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Batf basic leucine zipper ATF-like transcription factor involved_in ISS
ISO		 GO_REF:0000024
(PMID:20421391), (PMID:21572431)		 UniProt
RGD		 PMID:20421391 PMID:21572431 GO_REF:0000024 NCBI chr 6:111,084,717...111,107,052
Ensembl chr 6:105,353,715...105,376,051 		JBrowse link
G Bcl3 BCL3, transcription coactivator acts_upstream_of_or_within ISO MGI:2158443 (PMID:16081776) RGD PMID:16081776 NCBI chr 1:88,599,321...88,613,555
Ensembl chr 1:79,471,369...79,485,607 		JBrowse link
G Bcl6 BCL6, transcription repressor acts_upstream_of ISO MGI:96559 (PMID:12594267) RGD PMID:12594267 NCBI chr11:76,854,090...76,877,389
Ensembl chr11:76,854,090...76,877,389 		JBrowse link
G Gata3 GATA binding protein 3 involved_in
acts_upstream_of_or_within		 ISO (PMID:20484083)
(PMID:20706986)		 RGD PMID:20484083 PMID:20706986 NCBI chr17:73,544,234...73,575,670
Ensembl chr17:68,643,873...68,665,391 		JBrowse link
G Hlx H2.0-like homeobox acts_upstream_of ISO MGI:105367|MGI:2182089 (PMID:16424184) RGD PMID:16424184 NCBI chr13:98,811,852...98,817,264
Ensembl chr13:96,280,339...96,285,750 		JBrowse link
G Il4 interleukin 4 acts_upstream_of_or_within ISO (PMID:20706986) RGD PMID:20706986 NCBI chr10:38,272,003...38,277,549
Ensembl chr10:37,771,203...37,776,750 		JBrowse link
G Il4r interleukin 4 receptor acts_upstream_of ISO MGI:96109 (PMID:16424184) RGD PMID:16424184 NCBI chr 1:189,545,739...189,570,639
Ensembl chr 1:180,115,120...180,139,980 		JBrowse link
G Il6 interleukin 6 acts_upstream_of ISO (PMID:12594267) RGD PMID:12594267 NCBI chr 4:5,889,999...5,894,575
Ensembl chr 4:5,213,394...5,219,178 		JBrowse link
G Kmt2a lysine methyltransferase 2A involved_in ISO (PMID:20484083) RGD PMID:20484083 NCBI chr 8:54,013,547...54,089,219
Ensembl chr 8:45,118,814...45,193,181 		JBrowse link
G Men1 menin 1 involved_in ISO
IEA		 (PMID:20484083)
GO_REF:0000107		 RGD
Ensembl		 PMID:20484083 GO_REF:0000107 NCBI chr 1:213,068,166...213,074,132
Ensembl chr 1:203,639,000...203,644,871 		JBrowse link
G Myb MYB proto-oncogene, transcription factor involved_in ISO (PMID:20484083) RGD PMID:20484083 NCBI chr 1:17,759,309...17,793,306
Ensembl chr 1:15,939,761...15,973,057 		JBrowse link
T-helper cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atp7a ATPase copper transporting alpha acts_upstream_of_or_within ISO MGI:1856466 (PMID:8434133) RGD PMID:8434133 NCBI chr  X:75,159,635...75,267,094
Ensembl chr  X:71,094,202...71,198,354 		JBrowse link
G Il12b interleukin 12B involved_in ISO (PMID:1673147) RGD PMID:1673147 NCBI chr10:29,390,300...29,405,194
Ensembl chr10:28,893,008...28,902,903 		JBrowse link
G Pdp2 pyruvate dehydrogenase phosphatase catalytic subunit 2 involved_in ISS GO_REF:0000024 UniProt GO_REF:0000024 NCBI chr19:392,858...400,529
Ensembl chr19:386,406...394,074 		JBrowse link
G Ptger4 prostaglandin E receptor 4 involved_in ISS
ISO
IEA		 GO_REF:0000024
(PMID:19465928)
GO_REF:0000107		 UniProt
RGD
Ensembl		 PMID:19465928 GO_REF:0000024 GO_REF:0000107 NCBI chr 2:56,061,699...56,074,594
Ensembl chr 2:54,335,424...54,346,670 		JBrowse link
G Rorc RAR-related orphan receptor C involved_in ISO (PMID:14691482) RGD PMID:14691482 NCBI chr 2:184,698,779...184,723,942
Ensembl chr 2:182,009,286...182,034,907 		JBrowse link
thymic T cell selection term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Card11 caspase recruitment domain family, member 11 acts_upstream_of_or_within ISO MGI:3039682 (PMID:12867038) RGD PMID:12867038 NCBI chr12:13,621,140...13,758,115
Ensembl chr12:13,621,087...13,758,112 		JBrowse link
G Gata3 GATA binding protein 3 acts_upstream_of_or_within ISO MGI:2683927 (PMID:14670303) RGD PMID:14670303 NCBI chr17:73,544,234...73,575,670
Ensembl chr17:68,643,873...68,665,391 		JBrowse link
G Itpkb inositol-trisphosphate 3-kinase B acts_upstream_of_or_within ISO MGI:2680720 (PMID:14517551) RGD PMID:14517551 NCBI chr13:94,601,072...94,696,180
Ensembl chr13:92,069,216...92,162,004 		JBrowse link
G Jag2 jagged canonical Notch ligand 2 involved_in ISS
IEA
ISO		 PMID:10383933
GO_REF:0000107
(PMID:10383933)		 Ensembl
RGD		 PMID:10383933 PMID:10383933 GO_REF:0000107, RGD:8553281 NCBI chr 6:137,804,133...137,826,738
Ensembl chr 6:131,983,056...132,005,818 		JBrowse link
G Zap70 zeta chain of T cell receptor associated protein kinase 70 acts_upstream_of_or_within ISO MGI:2677447|MGI:3526403 (PMID:9208839) RGD PMID:9208839 NCBI chr 9:46,485,605...46,507,552
Ensembl chr 9:38,989,750...39,011,700 		JBrowse link
transitional one stage B cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abl1 ABL proto-oncogene 1, non-receptor tyrosine kinase acts_upstream_of_or_within ISO MGI:2153718 (PMID:19228876) RGD PMID:19228876 NCBI chr 3:35,377,587...35,480,843
Ensembl chr 3:14,979,853...15,083,065 		JBrowse link
G Tnfsf13b TNF superfamily member 13b acts_upstream_of_or_within ISO (PMID:17581616) RGD PMID:17581616 NCBI chr16:86,164,377...86,195,072
Ensembl chr16:79,462,402...79,492,693 		JBrowse link
transitional two stage B cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Traf3ip2 Traf3 interacting protein 2 involved_in ISO MGI:3510784 (PMID:20543113) RGD PMID:20543113 NCBI chr20:44,565,992...44,609,240
Ensembl chr20:43,011,450...43,054,667 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20553
    immune system process 3120
      leukocyte activation 1075
        lymphocyte activation 869
          lymphocyte differentiation 449
            B cell differentiation + 154
            T cell differentiation + 335
            natural killer cell differentiation + 35
            negative regulation of lymphocyte differentiation + 69
            positive regulation of lymphocyte differentiation + 122
            regulation of lymphocyte differentiation + 217
Path 2
Term Annotations click to browse term
  biological_process 20553
    developmental process 7140
      cellular developmental process 4831
        cell differentiation 4830
          cell development 3338
            hemopoiesis 1083
              leukocyte differentiation 688
                mononuclear cell differentiation 552
                  lymphocyte differentiation 449
                    B cell differentiation + 154
                    T cell differentiation + 335
                    natural killer cell differentiation + 35
                    negative regulation of lymphocyte differentiation + 69
                    positive regulation of lymphocyte differentiation + 122
                    regulation of lymphocyte differentiation + 217
paths to the root