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Gene: Pglyrp1 (peptidoglycan recognition protein 1) Rattus norvegicus
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Symbol: Pglyrp1
Name: peptidoglycan recognition protein 1
Description: Predicted to have N-acetylmuramoyl-L-alanine amidase activity; peptidoglycan binding activity; and peptidoglycan receptor activity. Involved in regulation of circadian sleep/wake cycle, sleep. Predicted to localize to the extracellular space. Orthologous to human PGLYRP1 (peptidoglycan recognition protein 1); INTERACTS WITH ammonium chloride; bisphenol A; flavonoids.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: peptidoglycan recognition protein; Pglyrp; Pgrp; PGRP-S
Orthologs:
Homo sapiens (human) : PGLYRP1 (peptidoglycan recognition protein 1)  HGNC  Alliance
Mus musculus (house mouse) : Pglyrp1 (peptidoglycan recognition protein 1)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Pglyrp1 (peptidoglycan recognition protein 1)
Pan paniscus (bonobo/pygmy chimpanzee) : PGLYRP1 (peptidoglycan recognition protein 1)
Canis lupus familiaris (dog) : PGLYRP1 (peptidoglycan recognition protein 1)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Pglyrp1 (peptidoglycan recognition protein 1)
Sus scrofa (pig) : PGLYRP1 (peptidoglycan recognition protein 1)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0179,790,879 - 79,796,064 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.0181,052,612 - 81,057,412 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4178,235,474 - 78,240,665 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.1178,313,584 - 78,318,776 (+)NCBI
Celera172,998,755 - 73,003,829 (+)NCBICelera
Cytogenetic Map1q21NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated
RGD Disease Portals

Genomics

Comparative Map Data
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 5.0)

Additional Information

External Database Links
Nomenclature History
RGD Curation Notes
 
More on Pglyrp1
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 621429
Created: 2002-08-06
Species: Rattus norvegicus
Last Modified: 2019-04-23
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.