Submit Data |  Help |  Video Tutorials |  News |  Publications |  FTP Download |  REST API |  Citing RGD |  Contact   
Gene: Syvn1 (synoviolin 1) Rattus norvegicus
Analyze
Symbol: Syvn1
Name: synoviolin 1
Description: Predicted to have several functions, including chaperone binding activity; enzyme binding activity; and unfolded protein binding activity. Predicted to be involved in several processes, including cellular protein metabolic process; negative regulation of endoplasmic reticulum stress-induced intrinsic apoptotic signaling pathway; and protein stabilization. Predicted to localize to the endoplasmic reticulum and nucleoplasm. Orthologous to human SYVN1 (synoviolin 1); PARTICIPATES IN Endoplasmic Reticulum-associated degradation pathway; ubiquitin/proteasome degradation pathway; INTERACTS WITH 2,6-dinitrotoluene; bisphenol A; diazinon.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: E3 ubiquitin-protein ligase synoviolin; HRD1 protein; LOC361712; RGD1310488; similar to HRD1 protein; synovial apoptosis inhibitor 1, synoviolin; synoviolin
Orthologs:
Homo sapiens (human) : SYVN1 (synoviolin 1)  HGNC  Alliance
Mus musculus (house mouse) : Syvn1 (synovial apoptosis inhibitor 1, synoviolin)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Syvn1 (synoviolin 1)
Pan paniscus (bonobo/pygmy chimpanzee) : SYVN1 (synoviolin 1)
Canis lupus familiaris (dog) : SYVN1 (synoviolin 1)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Syvn1 (synoviolin 1)
Sus scrofa (pig) : SYVN1 (synoviolin 1)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01221,409,281 - 221,416,229 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.01228,344,759 - 228,351,661 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41208,684,460 - 208,690,978 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11208,837,919 - 208,844,428 (+)NCBI
Celera1200,873,320 - 200,879,838 (+)NCBICelera
Cytogenetic Map1q43NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
References - curated
References - uncurated
RGD Disease Portals

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 5.0)

Additional Information

External Database Links
Nomenclature History
 
More on Syvn1
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1310488
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2019-04-23
Status: ACTIVE



NHLBI Logo

RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.